29 results on '"Malachowska, B."'
Search Results
2. Evolution of Radiotherapy Options for Elderly Patients with Early-Stage ER+ Breast Cancer: A 10 Year Review.
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Skalina, K.A., Malachowska, B., and Fox, J.L.
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INTRAOPERATIVE radiotherapy , *OLDER patients , *ACADEMIC medical centers , *SENTINEL lymph nodes , *BREAST cancer - Abstract
The past decade brought numerous developments in the treatment of early-stage, estrogen receptor positive (ER+) breast cancer. The 10-year results of CALGB 9343 published in 2013 demonstrated equivalent survival and acceptable local failure (LF) rates with the omission of radiation therapy (RT) in women 70 years and older with ER+ breast cancer. The introduction of shorter radiation courses, such as single-fraction intraoperative radiation therapy (IORT) and the 5-fraction regimen from the UK FAST-FORWARD trial have also been shown to have low LF rates at 5 years. We sought to evaluate for changing trends in patients' radiation treatment decisions over the past decade at an academic institution offering omission of radiation to eligible patients, as well as the shorter courses in more recent years. This study is a retrospective review of female patients at least 70 years of age with T1-2 (up to 3cm) N0 ER+/HER2- breast cancer, seen for radiation oncology consultation between January 2013 and September 15, 2023, at a main site of an urban academic medical center. All included patients underwent lumpectomy with or without sentinel node biopsy and were potentially eligible for omission of RT. A total of 316 women met inclusion criteria with an average age of 76.4 years ± 4.9. One hundred and ten (34.8%) women chose to omit radiation therapy after informed discussion. IORT became available in January 2018, and ultra-hypofractionation was offered after the trial publication, beginning in 2021. Overall, older patients were more likely to omit radiation (p<0.0001). There was a significant association between higher Charlson comorbidity index and omission of RT (p = 0.0005). Fewer patients chose to omit radiation in more recent years (Table 1), and in those opting to undergo RT, there was a statistically significant negative correlation between the year of diagnosis and length of RT course (R = -0.64, p<0.0001). Our analysis demonstrates that patients are increasingly electing to choose a shorter, more convenient course of RT over omission. Future studies will be needed to determine if this choice has an impact on recurrence rate or survival. [ABSTRACT FROM AUTHOR]
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- 2024
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3. Doctor knows best? Performance of clinical and calculator-assisted referral systems for children with potential MODY diabetes: O/6/THU/01
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Malachowska, B., Baranowska-Jazwiecka, A., Fendler, W., and Mlynarski, W.
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- 2012
4. Assessment of occupational exposure to stainless steel welding fumes – A human biomonitoring study
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Stanislawska, M., primary, Janasik, B., additional, Kuras, R., additional, Malachowska, B., additional, Halatek, T., additional, and Wasowicz, W., additional
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- 2020
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5. Effect of arsenic exposure on Nrf2-Keap1 pathway and epigenetic modification
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Janasik, B., primary, Reszka, E., additional, Stanislawska, M., additional, Jablonska, E., additional, Kuras, R., additional, Wieczorek, E., additional, Malachowska, B., additional, Fendler, W., additional, and Wasowicz, W., additional
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- 2016
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6. Genetic Variability of GCKR Alters Lipid Profiles in Children with Monogenic and Autoimmune Diabetes.
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Tracz, A., Madzio, J., Gnys, P., Malachowska, B., Borowiec, M., Wyka, K., Jarosz-Chobot, P., Mysliwiec, M., Szadkowska, A., Mlynarski, W., and Fendler, W.
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GENETIC mutation ,GLUCOKINASE genetics ,BLOOD sugar ,LIPIDS ,NUCLEOTIDES ,TYPE 1 diabetes - Abstract
Purpose: Mutations in the glucokinase (GCK) gene are associated with altered blood glucose and lipid concentrations. Our aim was to assess the effects on HbA1c and serum lipid levels of single nucleotide polymorphisms (SNPs) in 2 genes encoding proteins that interact with glucokinase: glucose-6-phospatase catalytic subunit 2 (G6PC2) and glucokinase regulatory protein (GCKR). Methods: The study group included 129 children with GCK- MODY from the Polish Registry of Monogenic Diabetes and 395 with type 1 diabetes (T1DM), in whom we genotyped 2 SNPs in G6PC2 (rs560887) and GCKR (rs1260326). Lipid concentrations were assessed in fasting serum samples. Results: Total and HDL cholesterol concentrations were significantly lower in the GCK- MODY group than in patients with T1DM (167.5 ± 32.5 mg/dl vs. 174.4 ± 31.1 mg/dl, p = 0.0435 and 48.42 ± 14.3 mg/dl vs. 58.7 ± 12.7 mg/dl, p < 0.0001, respectively). No differences in genotype distributions were found except for underrepresentation of GCKR TT homozygotes among GCK- MODY patients (10.9 % in GCK-MODY vs. 17.7 % in T1DM, p = 0.0651). GCKR genotypes showed significant associations with lipid profiles and HbA1c levels, whereas no such associations were noted for G6PC2 . After adjustment for confounders, TT homozygotes were shown to have higher total cholesterol and marginally higher LDL cholesterol and triglyceride levels (p = 0.0245, p = 0.0657 and p = 0.0550, respectively). The difference between TT homozygotes and other genotypes was similar in magnitude within the GCK-MODY and T1DM groups. No significant interactions between the type of diabetes and the GCKR or G6PC2 genotype were detected. Conclusions: Individuals who are homozygous TT at rs1260326 of the GCKR gene have higher triglyceride, total and LDL cholesterol levels regardless of the presence of GCK mutations. [ABSTRACT FROM AUTHOR]
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- 2014
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7. Immunological Effectiveness of Carbon Ion Radiotherapy in Pancreatic Cancer.
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Bell, B.I., Pandey, S., Malachowska, B., Schumacher, M.M., Young, D., Kumar, V., Velten, C., Moustafa, M., Sidoli, S., Guida, P., Abdollahi, A., and Guha, C.
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HEAVY ion radiotherapy , *LINEAR energy transfer , *TYPE I interferons , *TUMOR-infiltrating immune cells , *KILLER cells , *TUMOR growth - Abstract
Protons and carbon ions each confer dosimetric advantages over photons, yet of these modalities, only carbon ion radiotherapy (CIRT) delivers densely ionizing, high linear energy transfer (LET) radiation which results in more complex DNA damage and an increased relative biological effectiveness (RBE) compared to low LET photons. However, our classical understanding of RBE does not account for potential microenvironmental effects. We therefore performed a multi-institutional, multi-omics analysis to understand how CIRT shifts the contexture of the tumor immune microenvironment in pancreatic cancer. Murine pancreatic cancer cell lines derived from KrasLSL-G12D/+; Trp53LSL-R172H/+; Pdx1-CreERTM; Rosa26YFP/YFP (KPCY) mice which exhibit low T-cell infiltration (6419c5) vs. high T-cell infiltration (2838c3) were studied. These tumor cell lines were implanted subcutaneously into wild-type (WT) C57BL/6J or immunodeficient NSG mice and irradiated 7 days later. CIRT was performed at an LET d of ∼100 keV/μm in the mid-spread-out Bragg peak (SOBP) while low LET photon treatments were performed using orthovoltage X-rays or 137Cs γ-rays. Clonogenic assays were performed to determine the RBE, and proteomics was performed by mass spectrometry on cell culture supernatant 24 hours post-radiation. 6419c5 flank tumors were dissociated 7 days post-10 Gy of CIRT or X-rays and single cell RNA-sequencing (scRNA-seq) was performed on sorted live cells. Clonogenic assays in both cell lines revealed a CIRT RBE of 1.76 compared to photons. Despite these cell lines exhibiting similar clonogenic survival after CIRT in vitro, the response to CIRT in vivo was notably different between them in tumor growth experiments. There was a similar tumor growth delay with 10 Gy CIRT in both WT and NSG mice with 6419c5 tumors. However, 2838c3 responded to 10 Gy CIRT with a significantly longer tumor growth delay in WT vs. NSG mice (P < 0.05), suggesting that tumor infiltrating T lymphocytes contribute to tumor control after CIRT. Overlap analysis of common differentially expressed proteins related to CIRT from both cell lines identified a unique signature of CIRT with 25 upregulated and 5 downregulated proteins. scRNA-seq identified that CIRT upregulates genes and pathways associated with the response to type I interferons and with antigen presentation across populations including tumor cells, dendritic cells, and T/NK cells 7 days post-irradiation when compared to an equivalent physical dose of X-rays. CIRT not only exhibited an increased RBE, but it also generated a unique tumor immune microenvironment characterized by transcriptional evidence of a type I interferon response and enhanced antigen presentation when compared to low LET radiation. Tumor growth experiments further suggest that effective immune activation could contribute to the augmented in vivo RBE of CIRT. [ABSTRACT FROM AUTHOR]
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- 2024
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8. Radiation-Induced Tissue Regeneration: Pathways, Mechanisms, and Therapeutic Potential.
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Ahmed MM, Malachowska B, and Guha C
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This article explores the paradoxic nature of radiation as both a destructive and regenerative force. The article examines the interplay of signaling pathways, immune modulation, and stem cells in tissue regeneration post radiation, emphasizing the roles of key pathways like Wnt, Hedgehog, Notch, and p53. It highlights advancements in low-dose radiation therapy, extracellular vesicles, and stem cell-based interventions. Furthermore, the immune system's dual role in repair and damage is dissected, along with technologies such as artificial intelligence and bioengineered scaffolds that enhance therapeutic outcomes. The article offers a roadmap for integrating therapeutic innovation with regenerative medicine to improve patient outcomes., Competing Interests: Disclosure Grammarly was utilized to rectify the syntactical structure of scientific English., (Copyright © 2024. Published by Elsevier Inc.)
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- 2025
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9. Optimizing GRID and Lattice Spatially Fractionated Radiation Therapy: Innovative Strategies for Radioresistant and Bulky Tumor Management.
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Ahmed MM, Wu X, Mohiuddin M, Perez NC, Zhang H, Amendola BE, Malachowska B, Mohiuddin M, and Guha C
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- Humans, Radiation Tolerance, Radiotherapy Planning, Computer-Assisted methods, Neoplasms radiotherapy, Dose Fractionation, Radiation
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Treating radioresistant and bulky tumors is challenging due to their inherent resistance to standard therapies and their large size. GRID and lattice spatially fractionated radiation therapy (simply referred to GRID RT and LRT) offer promising techniques to tackle these issues. Both approaches deliver radiation in a grid-like or lattice pattern, creating high-dose peaks surrounded by low-dose valleys. This pattern enables the destruction of significant portions of the tumor while sparing healthy tissue. GRID RT uses a 2-dimensional pattern of high-dose peaks (15-20 Gy), while LRT delivers a three-dimensional array of high-dose vertices (10-20 Gy) spaced 2-5 cm apart. These techniques are beneficial for treating a variety of cancers, including soft tissue sarcomas, osteosarcomas, renal cell carcinoma, melanoma, gastrointestinal stromal tumors (GISTs), pancreatic cancer, glioblastoma, and hepatocellular carcinoma. The specific grid and lattice patterns must be carefully tailored for each cancer type to maximize the peak-to-valley dose ratio while protecting critical organs and minimizing collateral damage. For gynecologic cancers, the treatment plan should align with the international consensus guidelines, incorporating concurrent chemotherapy for optimal outcomes. Despite the challenges of precise dosimetry and patient selection, GRID RT and LRT can be cost-effective using existing radiation equipment, including particle therapy systems, to deliver targeted high-dose radiation peaks. This phased approach of partial high-dose induction radiation therapy with standard fractionated radiation therapy maximizes immune modulation and tumor control while reducing toxicity. Comprehensive treatment plans using these advanced techniques offer a valuable framework for radiation oncologists, ensuring safe and effective delivery of therapy for radioresistant and bulky tumors. Further clinical trials data and standardized guidelines will refine these strategies, helping expand access to innovative cancer treatments., Competing Interests: Declaration of competing interest The authors declare that there are no conflicts of interest with respect to the research, authorship, and/or publication of this article, except for Dr. Wu. Dr. Wu holds a patent related to Lattice Radiotherapy, which may pose a potential conflict of interest. This has been fully disclosed and managed according to the journal's policy on conflicts of interest., (Copyright © 2024 Elsevier Inc. All rights reserved.)
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- 2024
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10. The potential role of precision medicine to alleviate racial disparities in prostate, bladder and renal urological cancer care.
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Sindhu KK, Dovey Z, Thompson M, Nehlsen AD, Skalina KA, Malachowska B, Hasan S, Guha C, Tang J, and Salgado LR
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Background: Racial disparities in oncological outcomes resulting from differences in social determinants of health (SDOH) and tumour biology are well described in prostate cancer (PCa) but similar inequities exist in bladder (BCa) and renal cancers (RCCs). Precision medicine (PM) aims to provide personalized treatment based on individual patient characteristics and has the potential to reduce these inequities in GU cancers., Objective: This article aims to review the current evidence outlining racial disparities in GU cancers and explore studies demonstrating improved oncological outcomes when PM is applied to racially diverse patient populations., Evidence Acquisition: Evidence was obtained from Pubmed and Web of Science using keywords prostate, bladder and renal cancer, racial disparity and precision medicine. Because limited studies were found, preferred reporting items for systematic reviews and meta-analyses (PRISMA) guidelines were not applied but rather related articles were studied to explore existing debates, identify the current status and speculate on future applications., Results: Evidence suggests addressing SDOH for PCa can reverse racial inequities in oncological outcomes but differences in incidence remain. Similar disparities in BCa and RCC are seen, and it would be reasonable to suggest achieving parity in SDOH for all races would do the same. Research applying a PM approach to different ethnicities is lacking although in African Americans (AAs) with metastatic castrate-resistant prostate cancer (mCRPCa) better outcomes have been shown with androgen receptor inhibitors, radium-223 and sipuleucel. Exploiting the abscopal effect with targeted radiation therapy (RT) and immunotherapy has promise but requires further study, as does defining actionable mutations in specific patient groups to tailor treatments as appropriate., Conclusion: For all GU cancers, the historical underrepresentation of ethnic minorities in clinical trials still exists and there is an urgent need for recruitment strategies to address this. PM is a promising development with the potential to reduce inequities in GU cancers, however, both improved understanding of race-specific tumour biology, and enhanced recruitment of minority populations into clinical trials are required. Without this, the benefits of PM will be limited., Competing Interests: Dr. Zach Dovey is Medical Director and stock owner (with certificate of shares) of Medtech Holdings Ltd. No other authors have any conflicts to declare., (© 2024 The Authors. BJUI Compass published by John Wiley & Sons Ltd on behalf of BJU International Company.)
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- 2024
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11. Transcriptomics, metabolomics, and in-silico drug predictions for liver damage in young and aged burn victims.
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Malachowska B, Yang WL, Qualman A, Muro I, Boe DM, Lampe JN, Kovacs EJ, and Idrovo JP
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- Aged, Humans, Mice, Animals, Gene Expression Profiling, Transcriptome, Burns epidemiology, Burns metabolism, Burns therapy
- Abstract
Burn induces a systemic response affecting multiple organs, including the liver. Since the liver plays a critical role in metabolic, inflammatory, and immune events, a patient with impaired liver often exhibits poor outcomes. The mortality rate after burns in the elderly population is higher than in any other age group, and studies show that the liver of aged animals is more susceptible to injury after burns. Understanding the aged-specific liver response to burns is fundamental to improving health care. Furthermore, no liver-specific therapy exists to treat burn-induced liver damage highlighting a critical gap in burn injury therapeutics. In this study, we analyzed transcriptomics and metabolomics data from the liver of young and aged mice to identify mechanistic pathways and in-silico predict therapeutic targets to prevent or reverse burn-induced liver damage. Our study highlights pathway interactions and master regulators that underlie the differential liver response to burn injury in young and aged animals., (© 2023. The Author(s).)
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- 2023
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12. Targeted and untargeted metabolomic approach for GDM diagnosis.
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Burzynska-Pedziwiatr I, Dudzik D, Sansone A, Malachowska B, Zieleniak A, Zurawska-Klis M, Ferreri C, Chatgilialoglu C, Cypryk K, Wozniak LA, Markuszewski MJ, and Bukowiecka-Matusiak M
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Gestational diabetes mellitus (GDM) is a disorder which manifests itself for the first time during pregnancy and is mainly connected with glucose metabolism. It is also known that fatty acid profile changes in erythrocyte membranes and plasma could be associated with obesity and insulin resistance. These factors can lead to the development of diabetes. In the reported study, we applied the untargeted analysis of plasma in GDM against standard glucose-tolerant (NGT) women to identify the differences in metabolomic profiles between those groups. We found higher levels of 2-hydroxybutyric and 3-hydroxybutyric acids. Both secondary metabolites are associated with impaired glucose metabolism. However, they are products of different metabolic pathways. Additionally, we applied lipidomic profiling using gas chromatography to examine the fatty acid composition of cholesteryl esters in the plasma of GDM patients. Among the 14 measured fatty acids characterizing the representative plasma lipidomic cluster, myristic, oleic, arachidonic, and α-linoleic acids revealed statistically significant changes. Concentrations of both myristic acid, one of the saturated fatty acids (SFAs), and oleic acid, which belong to monounsaturated fatty acids (MUFAs), tend to decrease in GDM patients. In the case of polyunsaturated fatty acids (PUFAs), some of them tend to increase (e.g., arachidonic), and some of them tend to decrease (e.g., α-linolenic). Based on our results, we postulate the importance of hydroxybutyric acid derivatives, cholesteryl ester composition, and the oleic acid diminution in the pathophysiology of GDM. There are some evidence suggests that the oleic acid can have the protective role in diabetes onset. However, metabolic alterations that lead to the onset of GDM are complex; therefore, further studies are needed to confirm our observations., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Burzynska-Pedziwiatr, Dudzik, Sansone, Malachowska, Zieleniak, Zurawska-Klis, Ferreri, Chatgilialoglu, Cypryk, Wozniak, Markuszewski and Bukowiecka-Matusiak.)
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- 2023
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13. Reference Ranges of Glycemic Variability in Infants after Surgery-A Prospective Cohort Study.
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Kaminska H, Wieczorek P, Zalewski G, Malachowska B, Kucharski P, Fendler W, Szarpak L, and Jarosz-Chobot P
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- Blood Glucose, Child, Humans, Infant, Infant, Newborn, Prospective Studies, Reference Values, Blood Glucose Self-Monitoring methods, Hypoglycemia
- Abstract
We aimed to define reference ranges of glycemic variability indices derived from continuous glucose monitoring data for non-diabetic infants during post-operative intensive care treatment after cardiac surgery procedures. We performed a prospective cohort intervention study in a pediatric intensive care unit (PICU). Non-diabetic infants aged 0-12 months after corrective cardiovascular surgery procedures were fitted upon arrival to the PICU with a continuous glucose monitoring system (iPro2, Medtronic, Minneapolis, MN, USA). Thirteen glycemic variability indices were calculated for each patient. Complete recordings of 65 patients were collected on the first postoperative day. During the first three postsurgical days 5%, 24% and 43% of patients experienced at least one hypoglycemia episode, and 40%, 10% and 15%-hyperglycemia episode, respectively, in each day. Due to significant differences between the first postoperative day (mean glycemia 130 ± 31 mg/dL) and the second and third day (105 ± 18 mg/dL, 101 ± 22.2 mg/dL; p < 0.0001), we proposed two separate reference ranges-for the acute and steady state patients. Thus, for individual glucose measurements, we proposed a reference range between 85 and 229 mg/dL and 69 and 149 mg/dL. For the mean daily glucose level, ranges between 122 and 137 mg/dL and 95 and 110 mg/dL were proposed. In conclusion, rt-CGM revealed a very high likelihood of hyperglycemia in the first postsurgical day. The widespread use of CGM systems in a pediatric ICU setting should be considered as a safeguard against dysglycemic episodes; however, reference ranges for those patients should be different to those used in diabetes care.
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- 2022
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14. Multiomic analysis on human cell model of wolfram syndrome reveals changes in mitochondrial morphology and function.
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Zmyslowska A, Kuljanin M, Malachowska B, Stanczak M, Michalek D, Wlodarczyk A, Grot D, Taha J, Pawlik B, Lebiedzińska-Arciszewska M, Nieznanska H, Wieckowski MR, Rieske P, Mancias JD, Borowiec M, Mlynarski W, and Fendler W
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- Humans, Animals, Mice, Endoplasmic Reticulum Stress genetics, Neural Stem Cells metabolism, Neural Stem Cells pathology, Induced Pluripotent Stem Cells metabolism, Induced Pluripotent Stem Cells pathology, Membrane Proteins genetics, Membrane Proteins metabolism, Models, Biological, Wolfram Syndrome pathology, Wolfram Syndrome genetics, Wolfram Syndrome metabolism, Mitochondria metabolism, Mitochondria pathology, Proteomics
- Abstract
Background: Wolfram syndrome (WFS) is a rare autosomal recessive syndrome in which diabetes mellitus and neurodegenerative disorders occur as a result of Wolframin deficiency and increased ER stress. In addition, WFS1 deficiency leads to calcium homeostasis disturbances and can change mitochondrial dynamics. The aim of this study was to evaluate protein levels and changes in gene transcription on human WFS cell model under experimental ER stress., Methods: We performed transcriptomic and proteomic analysis on WFS human cell model-skin fibroblasts reprogrammed into induced pluripotent stem (iPS) cells and then into neural stem cells (NSC) with subsequent ER stress induction using tunicamycin (TM). Results were cross-referenced with publicly available RNA sequencing data in hippocampi and hypothalami of mice with WFS1 deficiency., Results: Proteomic analysis identified specific signal pathways that differ in NSC WFS cells from healthy ones. Next, detailed analysis of the proteins involved in the mitochondrial function showed the down-regulation of subunits of the respiratory chain complexes in NSC WFS cells, as well as the up-regulation of proteins involved in Krebs cycle and glycolysis when compared to the control cells. Based on pathway enrichment analysis we concluded that in samples from mice hippocampi the mitochondrial protein import machinery and OXPHOS were significantly down-regulated., Conclusions: Our results show the functional and morphological secondary mitochondrial damage in patients with WFS. Video Abstract., (© 2021. The Author(s).)
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- 2021
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15. Concentration of survivin in children with oligo- and polyarticular juvenile idiopathic arthritis (JIA): diagnostic and prognostic value-a single-center study.
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Lipinska J, Kaszkowiak M, Malachowska B, Swidrowska-Jaros J, and Smolewska E
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- Autoantibodies, Child, Female, Humans, Male, Prognosis, Arthritis, Juvenile diagnosis, Survivin analysis
- Abstract
Aim: The goal of the study was to assess the diagnostic and prognostic utility of survivin in patients with juvenile idiopathic arthritis (JIA)., Methods: Seventy children with JIA-59 newly diagnosed and 11 biologically treated (46 girls and 17 boys) aged 1.5-18 years and 29 healthy children as a control group, appropriately matched in terms of sex and age, were included in the study. The disease activity was established on the basis of the JADAS-27 criteria. The concentration of survivin was assessed by an ELISA test in serum and also 18 matched synovial fluid samples collected from patients with JIA., Results: Children with JIA were divided according to the subtype of the JIA. In 65.7% of patients, oligoarthritis was diagnosed. The largest group comprised children of low disease activity (62.9%) according to JADAS-27. The serum concentration of survivin was significantly higher in children with JIA compared to the controls (p < 0.001). The concentration of survivin was higher among patients positive for anti-cyclic citrullinated peptide autoantibodies (ACPA) (p = 0.001). In all synovial fluid samples, the concentration of survivin was higher than in matched serum (p = 0.003). Serum survivin concentration was not significantly associated with radiological damage status or active synovitis assessed by joint ultrasonography. Survivin level was not significantly associated with disease duration time or treatment with TNF-α inhibitors in DMARD's non-responders., Conclusions: Survivin should be considered as a biomarker of joint inflammation helpful in the diagnosis of oligo- and polyarticular JIA and probably not dependent on treatment with TNF-α inhibitors.
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- 2021
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16. Fetuin-A and Interleukine-8 in Children with the Clinical Remission of Type 1 Diabetes.
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Pyziak-Skupien A, Bobeff K, Wyka K, Banach K, Malachowska B, Fendler W, Szadkowska A, Mlynarski W, and Zmyslowska A
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- Adolescent, Biomarkers, Body Mass Index, Child, Child, Preschool, Cytokines blood, Diabetes Mellitus, Type 1 blood, Diabetes Mellitus, Type 1 diagnosis, Diabetes Mellitus, Type 1 therapy, Disease Management, Enzyme-Linked Immunosorbent Assay, Female, Humans, Insulin Resistance, Male, Odds Ratio, ROC Curve, Diabetes Mellitus, Type 1 metabolism, Interleukin-8 blood, alpha-2-HS-Glycoprotein metabolism
- Abstract
Background: Clinical partial remission (CPR) in most patients with type 1 diabetes (T1D) is observed shortly after clinical diagnosis. Increasing body weight and impaired insulin sensitivity may play a role in the pathogenesis of CPR. Several cytokines can also participate in the development of insulin resistance., Objective: To evaluate the relationship between birth weight, body mass index, and the concentrations of IL-8 and Fetuin-A, and the presence of clinical partial remission in children at the T1D onset., Methods: The study group consisted of 134 children with a newly diagnosed T1D in whom the presence of CPR was evaluated in a further 2-year course of diabetes. The control group included 47 children without glucose tolerance disorders. The concentrations of IL-8 and Fetuin-A were determined by the ELISA method., Results: CPR occurred in 75.34% of T1D patients. At T1D onset, higher values of BMI SDS in the remitters as compared to the patients without remission were observed. At the T1D onset, the concentrations of Fetuin-A (p=0.031) and IL-8 (p=0.042) were significantly higher in patients compared to those without CPR., Conclusion: Evaluation of Fetuin-A and IL-8 levels in patients with a newly diagnosed T1D can differentiate between patients with or without CPR.
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- 2020
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17. The level of extracellular superoxide dismutase in the first week of life in very and extremely low birth weight infants and the risk of developing bronchopulmonary dysplasia.
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Kicinski P, Malachowska B, Wyka K, Gach A, Jakubowski L, and Gulczynska E
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- Birth Weight, Correlation of Data, Female, Gestational Age, Humans, Infant, Newborn, Male, Poland, Predictive Value of Tests, Prognosis, Risk Assessment, Risk Factors, Bronchopulmonary Dysplasia diagnosis, Bronchopulmonary Dysplasia epidemiology, Infant, Extremely Low Birth Weight blood, Infant, Premature blood, Superoxide Dismutase blood
- Abstract
Background Antioxidant enzymes may play a significant role in the development of bronchopulmonary dysplasia (BPD). The aim of the study was to assess the relationship between the level of extracellular superoxide dismutase (SOD3) in the serum at days 1 and 7 of life and the risk of developing BPD. Methods The study comprised 103 neonates born before 32 weeks' gestation with a birth weight of ≤1500 g. Results In the investigated group, the median serum SOD3 level at day 1 of life was 4.01 ng/mL [interquartile range (IQR) 2.59-5.09 ng/mL] and at day 7 of life 3.13 ng/mL (IQR 2.49-4.34 ng/mL). A statistically significant decrease in the serum SOD3 level was found in the first week of life, P < 0.0001. No correlation was found between the serum SOD3 level at day 1 of life and gestational age R = 0.07, P = 0.4543 and birth weight R = 0.10, P = 0.3083. No statistically significant correlation was found between the dynamics of change in the SOD3 level in serum at days 1 and 7 of life and the risk of BPD development for the definition of BPD at day 28 of life, P = 0.8764 nor at 36 weeks' postmenstrual age, P = 0.6598. Conclusion The study revealed a statistically significant decrease in the serum SOD3 level in the first week of life in very and extremely low birth weight infants born before 32 weeks of gestation. In the clinical setting, no relationship was observed between the level of SOD3 in serum and the risk of developing BPD.
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- 2019
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18. Measurement of corneal thickness, optic nerve sheath diameter and retinal nerve fiber layer as potential new non-invasive methods in assessing a risk of cerebral edema in type 1 diabetes in children.
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Jeziorny K, Niwald A, Moll A, Piasecka K, Pyziak-Skupien A, Waszczykowska A, Baranska D, Malachowska B, Szadkowska A, Mlynarski W, and Zmyslowska A
- Subjects
- Adolescent, Brain Edema etiology, Brain Edema pathology, Case-Control Studies, Child, Diabetes Mellitus, Type 1 complications, Diabetes Mellitus, Type 1 pathology, Diabetic Ketoacidosis complications, Diabetic Ketoacidosis pathology, Diabetic Retinopathy diagnosis, Diabetic Retinopathy pathology, Female, Humans, Male, Nerve Fibers pathology, Optic Nerve pathology, Predictive Value of Tests, Retina pathology, Retinal Ganglion Cells pathology, Retinal Neurons pathology, Risk Factors, Tomography, Optical Coherence methods, Ultrasonography, Brain Edema diagnosis, Corneal Pachymetry, Diabetes Mellitus, Type 1 diagnosis, Diabetic Ketoacidosis diagnosis, Optic Nerve diagnostic imaging, Retina diagnostic imaging
- Abstract
Aims: Some patients with diabetic ketoacidosis develop cerebral edema (CE) in the course of type 1 diabetes mellitus (T1D), which may result in central nervous system disorders and high mortality. The imperfection of existing neuroimaging techniques for early recognition of CE forces us to search for the new and non-invasive methods. The aim of the study was to assess the usefulness of new methods (pachymetry, transorbital ultrasonography-USG, optical coherence tomography-OCT study) in the assessment of the risk of CE occurrence in children with newly diagnosed T1D., Methods: The study group included 50 children with newly diagnosed T1D, 54 patients with long-term T1D as a reference group and 40 children without glucose tolerance disorders as controls. In all subjects, a corneal thickness (CCT) index with pachymeter, optic nerve sheath diameter (ONSD) using transorbital USG and retinal nerve fiber layer (RNFL) during OCT study were measured and compared with selected clinical parameters of T1D., Results: In patients from a study group at onset of T1D, the higher CCT (p < 0.001) and ONSD (p < 0.001) values were observed as compared to the results obtained after 48 h of metabolic compensation. The ONSD correlated negatively with pH value (r = - 0.64; p < 0.001), BE (r = - 0.54, p < 0.001) and HCO
3- (r = - 0.50; p < 0.001). A positive correlation between RNFL and Na+ levels (r = 0.47; p < 0.005) was also observed., Conclusions: Transorbital USG and pachymetry may serve as the potential promising methods for the non-invasive assessment of the increased risk of development of CE in patients with T1D.- Published
- 2018
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19. Lipid profile changes in erythrocyte membranes of women with diagnosed GDM.
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Bukowiecka-Matusiak M, Burzynska-Pedziwiatr I, Sansone A, Malachowska B, Zurawska-Klis M, Ferreri C, Chatgilialoglu C, Ochedalski T, Cypryk K, and Wozniak LA
- Subjects
- Adult, Case-Control Studies, Chromatography, Gas, Fatty Acids blood, Fatty Acids chemistry, Fatty Acids, Monounsaturated blood, Fatty Acids, Monounsaturated chemistry, Female, Humans, Membrane Lipids chemistry, Metabolome, Pregnancy, Reference Values, Diabetes, Gestational blood, Erythrocyte Membrane metabolism, Membrane Lipids blood
- Abstract
Gestational diabetes mellitus (GDM) is a glucose intolerance that begins or is first recognized during pregnancy. It is currently a growing health problem worldwide affecting from 1% to 14% of all pregnant women depending on racial and ethnic group as well as the diagnostic and screening criteria. Our preliminary study aimed at investigating the erythrocyte membrane fatty acid profiles of pregnant women, in particular with diagnosed with gestational diabetes mellitus (GDM), and with normal glucose tolerant (NGT) pregnant women as a control group. The study group comprised 43 pregnant women, 32 of whom were diagnosed with GDM according to the WHO criteria, and 11 with normal glucose tolerance. The erythrocyte membrane phospholipids were obtained according to the Folch extraction procedure. Fatty acids (FA) were analyzed by gas chromatography (GC) as the corresponding fatty acid methyl esters (FAME). A cluster of 14 fatty acids identified contained >98% of the recognized peaks in the GC analysis. The analysis of fatty acids from erythrocytes revealed important differences between GDM and NGT women in the third trimester, and the results were correlated with biochemical data. Among the 14 measured FA representing the membrane lipidomic profile, the levels of three saturated FA (myristic, palmitic, stearic acids) tended to decrease in GDM patients, with the percentage content of stearic acid significantly changed. The relative content of monounsaturated fatty acids (MUFA) tended to increase, in particular the oleic acid and vaccenic acid contents were significantly increased in erythrocyte membranes of the GDM group in comparison with the NGT group. The GDM group demonstrated higher sapienic acid levels (+29%) but this change was not statistically significant. This study revealed association between an impaired cis-vaccenic acid concentration in erythrocytes membrane and GDM development. No significant changes of polyunsaturated fatty acids (PUFA) were observed in GDM and NGT erythrocytes. We postulate, basing on the differences between the GDM and NGT lipidomic profiles, that stearic and cis-vaccenic acids can be considered as dual biomarkers of specific SFA-MUFA conversion pathway, involving the coupling of delta-9 desaturase and elongase enzymes. Our results indicate that the SFA-MUFA families may be involved in the pathophysiology of metabolic diseases such as GDM, but the further studies are needed to confirm our hypothesis. In conclusion, the erythrocyte membranes of GDM women undergo remodeling resulting in abnormal fatty acid profiles, which are reflection of the long-term status of organism and can have great impact on both the mother and her offspring., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2018
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20. Effect of Arsenic Exposure on NRF2-KEAP1 Pathway and Epigenetic Modification.
- Author
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Janasik B, Reszka E, Stanislawska M, Jablonska E, Kuras R, Wieczorek E, Malachowska B, Fendler W, and Wasowicz W
- Subjects
- Adult, Arsenic urine, DNA Methylation genetics, DNA Methylation physiology, Gene Expression Regulation drug effects, Gene Expression Regulation genetics, Glutathione S-Transferase pi genetics, Heme Oxygenase-1 genetics, Humans, Male, Middle Aged, NAD(P)H Dehydrogenase (Quinone) genetics, Occupational Exposure adverse effects, Peroxiredoxins genetics, Signal Transduction drug effects, Signal Transduction genetics, Thioredoxin Reductase 1 genetics, Arsenic toxicity, Epigenesis, Genetic drug effects, Epigenesis, Genetic genetics, Kelch-Like ECH-Associated Protein 1 genetics, NF-E2-Related Factor 2 genetics
- Abstract
Arsenic (As) is a known toxic element and carcinogen. Transcription factor nuclear factor-erythroid 2-related factor 2 (NRF2) controls cellular adaptation to oxidants and electrophiles by inducing antioxidant genes in response to redox stress. To explore associations between As level and NRF2-regulated cytoprotective genes expression, an observational study was conducted in a population of 61 occupationally exposed men with median (Me) age 50 years (interquartile range (IQR) 42-54) and in a control group of 52 men aged 40 (IQR 31-51.5) without occupational exposure. NRF2, KEAP1, GSTP1, HMOX1, NQO1, PRDX1, and TXNRD1 transcript levels were determined by means of quantitative real-time PCR along with the gene expression, methylation of NRF2 and KEAP1, as well as global DNA methylation were assessed. The median urine As
tot. level in the exposed and control group was found to be 21.8 μg/g creat. (IQR 15.5-39.8 μg/g creat.) and 3.8 μg/g creat. (IQR 2.5-9.3) (p < 0.001). Global DNA methylation was significantly higher in occupationally exposed workers than in controls (Me 14.1 (IQR 9.5-18.1) vs Me 8.5 (IQR 5.9-12.6) p < 0.0001). NRF2 mRNA level was positively correlated with expression of all investigated NRF2-target genes in both groups (0.37 > R < 0.76, all p values < 0.0001). The multivariate linear regression adjusting for global methylation showed that As(III) level was significantly associated with expression of TXNRD1, GSTP1, HMOX1, and PRDX1. The results of this study indicate that arsenic occupational exposure is positively associated with global DNA methylation. The findings provide evidence for rather inactivation of NRF2-KEAP1 pathway in response to chronic arsenic exposure.- Published
- 2018
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21. Biomarkers of selenium status and antioxidant effect in workers occupationally exposed to mercury.
- Author
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Kuras R, Reszka E, Wieczorek E, Jablonska E, Gromadzinska J, Malachowska B, Kozlowska L, Stanislawska M, Janasik B, and Wasowicz W
- Subjects
- Adult, Glutathione Peroxidase metabolism, Humans, Male, Middle Aged, Peroxiredoxins metabolism, Real-Time Polymerase Chain Reaction, Selenoprotein P metabolism, Selenoproteins metabolism, Thioredoxin Reductase 1 metabolism, Thioredoxins metabolism, Glutathione Peroxidase GPX1, Antioxidants metabolism, Mercury blood, Mercury urine, Selenium blood, Selenium urine
- Abstract
The present observation based research was designed to evaluate the influence of occupational human exposure to metallic mercury (Hg°) vapor on the biomarkers of selenium status involved in the antioxidant defense system. For this purpose we determined Hg and selenium (Se) concentrations in body fluids, the markers of antioxidant effect measured as an activity of Se-dependent enzymes (red blood cell and plasma glutathione peroxidase: GPx1-RBC and GPx3-P), concentration of selenoprotein P in the plasma (SeP-P) and total antioxidant activity in the plasma (TAA-P) in 131 male workers from a chloralkali plant exposed to Hg° and 67 non-exposed males (control group). The mRNA expression levels of glutathione peroxidases (GPX1, GPX3), selenoprotein P (SEPP1), thioredoxin reductase 1 (TRXR1), thioredoxin 1 (TRX1), peroxiredoxins (PRDX1, PRDX2) were also examined in the leukocytes of peripheral blood. Hg concentration in the blood (Hg-B) and urine (Hg-U) samples was determined using the thermal decomposition amalgamation/atomic absorption spectrometry (TDA-AAS) method and Se concentrations in plasma (Se-P) and urine (Se-U) using the inductively coupled plasma mass spectrometry (ICP-MS) method. Activities of GPx1-RBC, GPx3-P and TAA-P were determined using the kinetic and spectrophotometric method, respectively. Gene expression analysis was performed using the quantitative Real-Time PCR. The results showed significant higher Hg levels among the Hg°-exposed workers in comparison to control group (12-times higher median for Hg-B and almost 74-times higher median for Hg-U concentration in chloralkali workers). Se-P was also significantly higher (Me (median): 82.85 μg/L (IQR (interquartile range) 72.03-90.28 μg/L) for chloralkali workers vs. Me: 72.74 μg/L (IQR 66.25-80.14 μg/L) for control group; p = 0.0001) but interestingly correlated inversely with Hg-U in chloralkali workers suggesting depletion of the Se protection among the workers with the highest Hg-U concentration. The mRNA level for GPX1, PRXD1 were markedly but significantly higher in the workers compared to the control group. Moreover, concentrations of Hg-B and Hg-U among the workers were significantly positively correlated with the levels of selenoprotein P at both the mRNA and selenoprotein levels. In the multivariate model, after adjusting to cofounders (dental amalgam fillings, age, BMI, job seniority time, smoking), we confirmed that Hg-U concentration was inversely correlated with genes expression of TRXR1. This is the first comprehensive assessment of the impact of occupational exposure of workers to Hg° at both the mRNA and selenoprotein levels, with investigation of fish intake obtained by means of a questionnaire. These findings suggest that exposure to Hg° alters gene expression of the antioxidant enzymes and the level of Se-containing selenoproteins., (Copyright © 2018 Elsevier GmbH. All rights reserved.)
- Published
- 2018
- Full Text
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22. Markers influencing the presence of partial clinical remission in patients with newly diagnosed type 1 diabetes.
- Author
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Pyziak A, Zmyslowska A, Bobeff K, Malachowska B, Fendler W, Wyka K, Baranowska-Jazwiecka A, Szymanska M, Szadkowska A, and Mlynarski W
- Subjects
- Body Mass Index, Child, Diabetes Mellitus, Type 1 diagnosis, Diabetes Mellitus, Type 1 drug therapy, Female, Follow-Up Studies, Humans, Insulin therapeutic use, Male, Prognosis, Remission Induction, Biomarkers metabolism, Diabetes Mellitus, Type 1 metabolism, Hypoglycemic Agents therapeutic use
- Abstract
Background: The aim of the study was to compare the selected markers in children with and without partial clinical remission (CR) of newly diagnosed type 1 diabetes (T1D)., Methods: The study group consisted of 186 patients (F/M; 87/99) at onset of T1D and 24 months of follow-up. Partial CR was defined as insulin requirement <0.5 IU/kg and glycated hemoglobin (HbA1c) <7%., Results: Partial CR was observed in 115/186 (61.83%) of patients. At diagnosis body mass index standard deviation (BMI SDS) was higher among remitters than in non-remitters (p=0.0051) and remitters were younger (p=0.0029). In the follow-up a higher triglyceride concentration in non-remitters compared to remitters (p=0.0455) and a lower high density lipoprotein (HDL) cholesterol level (p=0.0119) were noticed., Conclusions: Younger age and higher BMI at diagnosis of T1D can predispose to partial CR in children. In patients with CR of T1D after 2 years of follow-up a lipid profile improvement is observed.
- Published
- 2017
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23. Relationship between arsenic and selenium in workers occupationally exposed to inorganic arsenic.
- Author
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Janasik B, Zawisza A, Malachowska B, Fendler W, Stanislawska M, Kuras R, and Wasowicz W
- Subjects
- Adult, Creatinine urine, Humans, Male, Middle Aged, Multivariate Analysis, Arsenic urine, Occupational Exposure analysis, Selenium blood
- Abstract
The interaction between arsenic (As) and selenium (Se) has been one of the most extensively studied. The antagonism between As and Se suggests that low Se status plays an important role in aggravating arsenic toxicity in diseases development. The objective of this study was to assess the Se contents in biological samples of inorganic As exposed workers (n=61) and in non-exposed subjects (n=52). Median (Me) total arsenic concentration in urine of exposed workers was 21.83μg/g creat. (interquartile range (IQR) 15.49-39.77) and was significantly higher than in the control group - (Me 3.75μg/g creat. (IQR 2.52-9.26), p<0.0001). The median serum Se concentrations in the study group and the control were: 54.20μg/l (IQR 44.2-73.10μg/l) and 55.45μg/l (IQR 38.5-69.60μg/l) respectively and did not differ significantly between the groups. In the exposed group we observed significantly higher urine concentrations of selenosugar 1 (SeSug 1) and selenosugar 3 (SeSug3) than in the control group Me: 1.68μg/g creat. (IQR 1.25-2.97 vs Me: 1.07μg/g creat. (IQR 0.86-1.29μg/g), p<0.0001 for SeSug1; Me: 0.45μg/g creat. (IQR 0.26-0.69) vs Me: 0.28μg/g creat. (IQR 0.17-0.45μg/g), p=0.0021). In the multivariate model, after adjusting to cofounders (age, BMI, job seniority time, consumption of fish and seafood and smoking habits) the high rate of arsenic urine wash out (measured as a sum of iAs+MMA+DMA) was significantly associated with the high total selenium urine excretion (B=0.14 (95%CI (confidence interval) 0.05-0.23)). Combination of both arsenic and selenium status to assess the risk of arsenic-induced diseases requires more studies with regard to both the analysis of speciation, genetics and the influence of factors such as nutritional status., (Copyright © 2017 Elsevier GmbH. All rights reserved.)
- Published
- 2017
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24. Evolutionarily conserved serum microRNAs predict radiation-induced fatality in nonhuman primates.
- Author
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Fendler W, Malachowska B, Meghani K, Konstantinopoulos PA, Guha C, Singh VK, and Chowdhury D
- Subjects
- Animals, Female, Gene Expression Profiling, Gene Expression Regulation, Macaca mulatta, Male, Reproducibility of Results, Sex Characteristics, Survival Analysis, Conserved Sequence, Evolution, Molecular, MicroRNAs blood, MicroRNAs genetics, Radiation Injuries blood, Radiation Injuries genetics
- Abstract
Effective planning for the medical response to a radiological or nuclear accident is complex. Because of limited resources for medical countermeasures, the key would be to accurately triage and identify victims most likely to benefit from treatment. We used a mouse model system to provide evidence that serum microRNAs (miRNAs) may effectively predict the impact of radiation on the long-term viability of animals. We had previously used nonhuman primates (NHPs) to demonstrate that this concept is conserved and serum miRNA signatures have the potential to serve as prediction biomarkers for radiation-induced fatality in a human population. We identified a signature of seven miRNAs that are altered by irradiation in both mice and NHPs. Genomic analysis of these conserved miRNAs revealed that there is a combination of seven transcription factors that are predicted to regulate these miRNAs in human, mice, and NHPs. Moreover, a combination of three miRNAs (miR-133b, miR-215, and miR-375) can identify, with nearly complete accuracy, NHPs exposed to radiation versus unexposed NHPs. Consistent with historical data, female macaques appeared to be more sensitive to radiation, but the difference was not significant. Sex-based stratification allowed us to identify an interaction between gender and miR-16-2 expression, which affected the outcome of radiation exposure. Moreover, we developed a classifier based on two miRNAs (miR-30a and miR-126) that can reproducibly predict radiation-induced mortality. Together, we have obtained a five-miRNA composite signature that can identify irradiated macaques and predict their probability of survival., (Copyright © 2017, American Association for the Advancement of Science.)
- Published
- 2017
- Full Text
- View/download PDF
25. Altered platelets' morphological parameters in children with type 1 diabetes – a case-control study.
- Author
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Malachowska B, Tomasik B, Szadkowska A, Baranowska-Jazwiecka A, Wegner O, Mlynarski W, and Fendler W
- Subjects
- Adolescent, Blood Platelets physiology, Cardiovascular Diseases blood, Cardiovascular Diseases etiology, Case-Control Studies, Cell Shape, Child, Diabetes Mellitus, Type 1 pathology, Female, Humans, Male, Mean Platelet Volume, Risk Factors, Blood Platelets pathology, Diabetes Mellitus, Type 1 blood
- Abstract
Background: Platelet hyperreactivity is a factor which contributes towards increased risk of cardiovascular events in adults with type 2 diabetes (T2DM). However, little is known about platelets' disturbances among children with type 1 diabetes (T1DM). The aim of the study was to investigate whether platelets' morphology or function are altered in children with type 1 diabetes, potentially predisposing them to cardiovascular events in the future., Methods: The study group consisted of 389 children with T1DM during the 2008-2010 period. Patients with acute diabetes complications and ongoing infections were excluded from the study. An equinumerous (N = 389), age and sex-matched control group was assembled from children undergoing routine, minor surgical procedures in the same hospital. Platelet: count (PLT), mean volume (MPV), distribution width (PDW) and platelet large cell ratio (P-LCR) as well as HbA1c levels were measured. For statistical analysis we used Chi-square tests, the student's t-test, one-way analysis of variance (ANOVA), the Pearson's correlation coefficient and linear regression models in order to adjust for covariates., Results: MPV, PDW and P-LCR were significantly higher among children with diabetes in comparison with the control group (MPV 10.47+/-0.85 fL vs 10.23+/-0.94 fL, p = 0.0007; PDW 12.09+/-1.80% vs 11.66+/-1.90%, p = 0.0032; P-LCR 28.21+/-6.15% vs 26.29+/-6.38%, p < 0.0001). PLT however, were shown to be similar (263.55+/-60.04 vs 268.77+/-65.78 10(3)/μl; p = 0.5637). In both cases and controls age was inversely correlated with platelet count (for study group: r = -0.30, p < 0.0001; for control group: r = -0.34, p < 0.0001), positively correlated with MPVs (r = 0.20, p < 0.0001; r = 0.26, p < 0.0001), PDW (r = 0.25, p < 0.0001 and r = 0.24, p < 0.0001) and P-LCR (r = 0.26, p < 0.0001; r = 0.26, p < 0.0001). After adjustment for confounding factors, higher platelet counts were associated with poorer metabolic control (beta = 0.20; 0.0001)., Conclusions: Platelets of paediatric patients with T1DM show morphological evidence of hyperreactivity (higher MPV, PDW and P-LCR), while poorer metabolic control increases their number potentially predisposing the patients to future cardiovascular events.
- Published
- 2015
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26. Association of microRNA-93, 190, 200b and receptor status in core biopsies from stage III breast cancer patients.
- Author
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Kolacinska A, Morawiec J, Pawlowska Z, Szemraj J, Szymanska B, Malachowska B, Morawiec Z, Morawiec-Sztandera A, Pakula L, Kubiak R, and Zawlik I
- Subjects
- Adult, Aged, Aged, 80 and over, Biopsy, Large-Core Needle, Breast Neoplasms pathology, Carcinoma, Ductal, Breast pathology, Case-Control Studies, Female, Gene Expression, Humans, Mammary Glands, Human metabolism, Mammary Glands, Human pathology, MicroRNAs genetics, Middle Aged, Receptor, ErbB-2 metabolism, Receptors, Estrogen metabolism, Receptors, Progesterone metabolism, Breast Neoplasms metabolism, Carcinoma, Ductal, Breast metabolism, MicroRNAs metabolism
- Abstract
Oncologists now favor more personalized treatment strategies in breast cancer patients. Gene expression analysis has been widely used, but less is known about epigenetic factors, for example, microRNAs (miRNAs). The aim of this study was to determine the relationship between selected miRNAs and receptor status in core biopsies sampled before preoperative chemotherapy in stage III locally advanced breast cancer (LABC) patients. In 37 LABC core biopsies, three miRNAs per sample were analyzed: hsa-miR-93-5p, hsa-miR-190a, and hsa-miR-200b-3p, and hsa-miR-103a-3p as an endogenous control (TaqMan(®) RT-PCR; Applied Biosystems). Receptor status was determined by a dedicated pathologist. The Mann-Whitney U, Shapiro-Wilk, and Levene's tests were used to compare related samples. Levels of miRNA-93 differed significantly in core biopsies of LABC patients with different expressions of ER (estrogen receptor) and PR (progesterone receptor). Higher levels of miRNA-93 were found in ER-negative (p=0.0027) and PR-negative patients (p=0.0185). Levels of miRNA-190 and 200b did not differ significantly in core biopsies of LABC patients who expressed ER and PR differently (p=0.7727, p=0.9434, p=0.6213, and p=0.1717). Levels of miRNA-93, 190, and 200b were not significantly different in core biopsies of LABC patients with different HER2 (human epidermal growth factor 2) expressions (p=0.8013, p=0.2609, and p=0.3222). The assessment of core biopsy miRNA profiles and receptor-based subtypes may identify new signaling pathways for improved breast cancer classification.
- Published
- 2014
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27. Less but better: cardioprotective lipid profile of patients with GCK-MODY despite lower HDL cholesterol level.
- Author
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Fendler W, Rizzo M, Borowiec M, Malachowska B, Antosik K, Szadkowska A, Banach M, Urbanska-Kosinska M, Szopa M, Malecki M, and Mlynarski W
- Subjects
- Adolescent, Adult, Case-Control Studies, Child, Cholesterol, LDL blood, Diabetes Mellitus, Type 1 enzymology, Diabetes Mellitus, Type 1 genetics, Female, Glucokinase blood, Hepatocyte Nuclear Factor 1-alpha genetics, Hepatocyte Nuclear Factor 1-alpha metabolism, Humans, Lipoproteins, HDL blood, Lipoproteins, LDL blood, Male, Young Adult, Cholesterol, HDL blood, Diabetes Mellitus, Type 1 blood, Glucokinase genetics
- Abstract
Patients with diabetes caused by single-gene mutations generally exhibit an altered course of diabetes. Those with mutations of the glucokinase gene (GCK-MODY) show good metabolic control and low risk of cardiovascular complications despite paradoxically lowered high-density lipoprotein (HDL) cholesterol levels. In order to investigate the matter, we analyzed the composition of low-density lipoprotein (LDL) and HDL subpopulations in such individuals. The LipoPrint(©) system (Quantimetrix, USA) based on non-denaturing, linear polyacrylamide gel electrophoresis was used to separate and measure LDL and HDL subclasses in fresh-frozen serum samples from patients with mutations of glucokinase or HNF1A, type 1 diabetes (T1DM) and healthy controls. Fresh serum samples from a total of 37 monogenic diabetes patients (21 from GCK-MODY and 16 from HNF1A-MODY), 22 T1DM patients and 15 healthy individuals were measured in this study. Concentrations of the small, highly atherogenic LDL subpopulation were similar among the compared groups. Large HDL percentage was significantly higher in GCK-MODY than in control (p = 0.0003), T1DM (p = 0.0006) and HNF1A-MODY groups (p = 0.0246). Patients with GCK-MODY were characterized by significantly lower intermediate HDL levels than controls (p = 0.0003) and T1DM (p = 0.0005). Small, potentially atherogenic HDL content differed significantly with the GCK-MODY group showing concentrations of that subfraction from control (p = 0.0096), T1DM (p = 0.0193) and HNF1A-MODY (p = 0.0057) groups. Within-group heterogeneity suggested the existence of potential gene-gene or gene-environment interactions. GCK-MODY is characterized by a strongly protective profile of HDL cholesterol subpopulations. A degree of heterogeneity within the groups suggests the existence of interactions with other genetic or clinical factors.
- Published
- 2014
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28. Association of microRNAs and pathologic response to preoperative chemotherapy in triple negative breast cancer: preliminary report.
- Author
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Kolacinska A, Morawiec J, Fendler W, Malachowska B, Morawiec Z, Szemraj J, Pawlowska Z, Chowdhury D, Choi YE, Kubiak R, Pakula L, and Zawlik I
- Subjects
- Adult, Aged, Aged, 80 and over, Female, Gene Expression Profiling, Gene Regulatory Networks, Humans, Middle Aged, Neoadjuvant Therapy, Neoplasm Grading, Neoplasm Staging, Preoperative Period, Treatment Outcome, Triple Negative Breast Neoplasms pathology, Antineoplastic Combined Chemotherapy Protocols therapeutic use, MicroRNAs genetics, Triple Negative Breast Neoplasms drug therapy, Triple Negative Breast Neoplasms genetics
- Abstract
Triple negative breast cancer (TNBC) has caught the attention of oncologists worldwide because of poor prognosis and paucity of targeted therapies. Gene pathways have been widely studied, but less is known about epigenetic factors such as microRNAs (miRNAs) and their role in tailoring an individual systemic and surgical approach for breast cancer patients. The aim of the study was to examine selected miRNAs in TNBC core biopsies sampled before preoperative chemotherapy and the subsequent pathologic response in mastectomy or breast conservation specimens. Prior to treatment, core needle biopsies were collected from 11 female patients with inoperable locally advanced TNBC or large resectable tumors suitable for down-staging. In all 11 TNBC core biopsies we analyzed 19 miRNAs per sample: 512, 190, 200, 346, 148, 449, 203, 577, 93, 126, 423, 129, 193, 182, 136, 135, 191, 122 and 222 (miRCURY LNA™ Universal RT microRNA polymerase chain reaction Custom Pick & Mixpanels). The Wilcoxon signed-rank test was used to compare related samples. Ingenuity pathway analysis was used to evaluate potential functional significance of differentially expressed miRNAs. Statistical analysis showed that 3 of 19 miRNAs differed in relation to pathologic response i.e. good versus poor. These differences failed to reach statistical significance, although a trend was observed (p=0.06). Among these miRNAs, we identified-miR-200b-3p, miR-190a and miR-512-5p. In summary, our results indicate that higher miR-200b-3p, higher miR-190a and lower miR-512-5p expression levels in core biopsies sampled from TNBC patients may be associated with better pathologic response to chemotherapy and the increased feasibility of breast conserving surgery in these patients. Although these results were from a small cohort, they provide an important basis for larger, prospective, multicenter studies to investigate the potential role of miRNAs in neoadjuvant setting.
- Published
- 2014
- Full Text
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29. TP53 promoter methylation in primary glioblastoma: relationship with TP53 mRNA and protein expression and mutation status.
- Author
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Jesionek-Kupnicka D, Szybka M, Malachowska B, Fendler W, Potemski P, Piaskowski S, Jaskolski D, Papierz W, Skowronski W, Och W, Kordek R, and Zawlik I
- Subjects
- Base Sequence, DNA Primers genetics, Epigenesis, Genetic genetics, ErbB Receptors metabolism, Female, Humans, Immunohistochemistry, Male, Molecular Sequence Data, Mutation genetics, Poland, Real-Time Polymerase Chain Reaction, Reverse Transcriptase Polymerase Chain Reaction, Sequence Analysis, DNA, Statistics, Nonparametric, Superoxide Dismutase metabolism, Superoxide Dismutase-1, DNA Methylation, Glioblastoma genetics, Promoter Regions, Genetic genetics, RNA, Messenger metabolism, Tumor Suppressor Protein p53 genetics, Tumor Suppressor Protein p53 metabolism
- Abstract
Reduced expression of TP53 by promoter methylation has been reported in several neoplasms. It remains unclear whether TP53 promoter methylation is associated with reduced transcriptional and protein expression in glioblastoma (GB). The aim of our work was to study the impact of TP53 methylation and mutations on TP53 mRNA level and protein expression in 42 molecularly characterized primary GB tumors. We also evaluate the impact of all molecular alterations on the overall patient survival. The frequency of TP53 promoter methylation was found in 21.4%. To the best of our knowledge, this is the first report showing such high frequency of TP53 promoter methylation in primary GB. There was no relation between TP53 promoter methylation and TP53 mRNA level (p=0.5722) and between TP53 promoter methylation and TP53 protein expression (p=0.2045). No significant associations were found between TP53 mRNA expression and mutation of TP53 gene (p=0.9076). However, significant association between TP53 mutation and TP53 protein expression was found (p=0.0016). Our data suggest that in primary GB TP53 promoter methylation does not play a role in silencing of TP53 transcriptional and protein expression and is probably regulated by other genetic and epigenetic mechanisms associated with genes involved in the TP53 pathway.
- Published
- 2014
- Full Text
- View/download PDF
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