298 results on '"Marine nematodes"'
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2. Insights into taxonomic and functional trait assessment of marine nematodes in mediterranean coastal ecosystems after exposure to polyethylene microplastics and sulfonamide antibiotics
- Author
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Bouleefah, F., Nasri, A., Hannachi, A., Béjaoui, M., and Mahmoudi, E.
- Published
- 2024
- Full Text
- View/download PDF
3. Three new species of free-living marine nematodes of the Microlaimus genus (Nematoda: Microlaimidae) from the continental shelf off northeastern Brazil (Atlantic Ocean).
- Author
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Manoel, Alex, Neres, Patrícia F., and Esteves, Andre M.
- Subjects
CONTINENTAL shelf ,SPECIES ,NEMATODES ,OCEAN ,SEDIMENT sampling - Abstract
Three new species of the Microlaimus genus (Nematoda: Microlaimidae) are described from sample sediments collected in the South Atlantic, along the Continental Shelf break of Northeastern Brazil. Microlaimus paraundulatus sp. n. possesses four setiform cephalic sensillae, a buccal cavity with three small teeth, arched and slender spicules and a wave-shaped gubernaculum. Microlaimus modestus sp. n. is characterized by four small cephalic sensillae, a buccal cavity with three teeth (one large dorsal tooth), cephalated spicules and a strongly arched gubernaculum in the distal region. Microlaimus nordestinus sp. n. is characterized by the following set of features: relatively long body, eight rows of hypodermal glands that extend longitudinally along the body and a funnel-shaped gubernaculum surrounding the spicules at the distal end. An amendment of the diagnosis is proposed for the genus. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
4. Three new species of free-living marine nematodes of the Microlaimus genus (Nematoda: Microlaimidae) from the continental shelf off northeastern Brazil (Atlantic Ocean)
- Author
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Alex Manoel, Patrícia F. Neres, and Andre M. Esteves
- Subjects
Marine nematodes ,Taxonomy ,Species description ,South Atlantic ,Nematode diversity ,Medicine ,Biology (General) ,QH301-705.5 - Abstract
Three new species of the Microlaimus genus (Nematoda: Microlaimidae) are described from sample sediments collected in the South Atlantic, along the Continental Shelf break of Northeastern Brazil. Microlaimus paraundulatus sp. n. possesses four setiform cephalic sensillae, a buccal cavity with three small teeth, arched and slender spicules and a wave-shaped gubernaculum. Microlaimus modestus sp. n. is characterized by four small cephalic sensillae, a buccal cavity with three teeth (one large dorsal tooth), cephalated spicules and a strongly arched gubernaculum in the distal region. Microlaimus nordestinus sp. n. is characterized by the following set of features: relatively long body, eight rows of hypodermal glands that extend longitudinally along the body and a funnel-shaped gubernaculum surrounding the spicules at the distal end. An amendment of the diagnosis is proposed for the genus.
- Published
- 2024
- Full Text
- View/download PDF
5. Zoonotic Marine Nematode Infection of Fish Products in Landlocked Country, Slovakia
- Author
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Mikuláš Oros, Daniel Barčák, Daniela Antolová, Miroslava Fecková, and Tomáš Scholz
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anisakiasis ,Anisakis ,food safety ,zoonoses ,parasites ,marine nematodes ,Medicine ,Infectious and parasitic diseases ,RC109-216 - Abstract
Fish products in Slovakia have been heavily infected with Anisakis spp. larvae, which causes human anisakiasis. We found larvae in all tested samples of frozen Atlantic herring. Anisakid allergen t-Ani s7 testing revealed 2 positive cases in humans, signaling need for health authorities to closely monitor zoonotic marine parasites, even in inland areas.
- Published
- 2023
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- View/download PDF
6. Revision of the genus Metoncholaimus (Nematoda: Enoplida) with description of new species from the South China Sea.
- Author
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Zograf, Julia K., Efimova, Kseniya V., Trebukhova, Yulia A., and Pavlyuk, Olga N.
- Subjects
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LAKES , *SPECIES , *FAMILY relations , *SEAWATER salinity , *RECOMBINANT DNA - Abstract
Summary: The family Oncholaimidae comprises ca 350 species of widespread nematodes. They are common in the seas and oceans and are also found in freshwater lakes and rivers. Here we provide the first description of Metoncholaimus species from the South China Sea. Metoncholaimus placatus sp. n. is characterised by the spicules 2.2-2.8 anal body diam. long, gubernaculum small, nearly parallel to the spicules, S-curved. Supplementary organ is composed of transversely elongated prominence with two sensillar structures (receptors). A pictorial key to the species level of Metoncholaimus species is provided. In this study, the D2-D3 domain of the LSU rDNA and the nearly full-length SSU rDNA were selected as targets for species identification. Phylogenetic relationships within the family Oncholaimidae remained unresolved despite of the various sequences analysed in different loci. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
7. Cosmopolitism, rareness and endemism in deep-sea marine nematodes
- Author
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R. Danovaro and C. Gambi
- Subjects
Marine nematodes ,cosmopolitanism ,endemism ,biodiversity patterns ,Zoology ,QL1-991 - Abstract
Nematodes represent the most abundant benthic metazoan of all seas and oceans, and their relative importance increases with increasing water depth. Understanding the biodiversity patterns of this dominant phylum could be a critical step towards our comprehension of the evolutionary patterns across the largest biome of the biosphere. For instance, it has been assumed for a long time that nematodes are ubiquitous across depths, latitudes and biogeographic regions, but there is still little scientific evidence for this lack of endemism. The present study is based on a meta-analysis of nematode biodiversity data collected from 246 deep-sea sites of the Atlantic Ocean and Mediterranean Sea. We explored the cosmopolitanism, rareness and potential endemism of nematode genera in deep-sea sediments. The results of this analysis indicate that only one-third of nematode families are widely distributed and could potentially be cosmopolitan, whereas 94% of the nematode genera are linked to specific habitats or bathymetric ranges. Singleton nematode genera (i.e. genera presenting as a single individual only in one specific habitat) increased in importance with increasing water depth. We conclude that rareness and endemism may be a far more common feature than previously thought in deep-sea nematode assemblages and hypothesise that the deep ocean interior could be a huge reservoir of endemic nematode species.
- Published
- 2022
- Full Text
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8. Nematode community structures in the presence of wastewater treatment plant discharge.
- Author
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Ridall, Aaron and Ingels, Jeroen
- Subjects
SEWAGE disposal plants ,NEMATOCIDES ,POINT sources (Pollution) ,BIOINDICATORS ,INFRASTRUCTURE (Economics) ,SEDIMENT sampling - Abstract
Wastewater treatment plants (WWTPs) represent major point sources of pollution in coastal systems, affecting benthic ecosystems. In the present study, we assessed the potential role that WWTPs have in shaping nematode communities and established baseline knowledge of free-living nematode community structures in St. Andrew Bay, Florida. Sediment samples were collected from four sites representing areas of WWTP outflow and areas with no apparent outflow, during the winter and summer. Nematode communities across sites were significantly different, and the differences were strongly associated with the distance to the nearest WWTP. While the communities were not different along transects at each site, nor across seasons, community dissimilarity across sites was high, implying strong contrasts throughout the bay system. Dominance of tolerant, opportunistic genera and Ecological Quality Status assessments suggest that the system is stressed by organic enrichment, possibly linked to the WWTPs. Our results suggest that knowledge on the life-history of dominant genera is imperative to assess the ecological quality of a benthic system, in addition to taxonomic and functional metrics. Considering the value of marine nematodes as bioindicators, more work should be done to monitor temporal variability in nematode communities in this system as future infrastructure changes alter its dynamics. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
9. Two new species of Cyatholaimidae (Nematoda: Chromadorida) from the Southeastern Brazilian coast with emphasis on the pore complex and lateral pore-like structures.
- Author
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Cunha, Beatriz P., Fonseca, Gustavo, and Cecília Z. Amaral, Antonia
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NUMBERS of species ,SPECIES ,CUTICLE ,NEMATODES ,RECOMBINANT DNA ,PHARYNX - Abstract
Cyatholaimidae is a common and diverse family of mainly marine nematodes, potentially, with a large number of species to be discovered. The taxonomy of the group is marked by a lack of information about the evolutionary history of the characters and of detailed descriptions of morphological structures that may be taxonomically relevant. Two new species of the family are described from a sublittoral region in Southeastern Brazil, emphasizing the importance of the distribution and morphology of pore complex and pore-like structures present on the cuticle. The taxonomic importance of the cuticle ornamentation and spicule shape for the Biarmifer species, as well as the precloacal supplements structures of Pomponema species, are discussed. Biarmifer nesiotes sp. nov. differs from other species of the genus by the presence of eight longitudinal rows of pore complex on the cuticle and by the shape of the copulatory structure. Pomponema longispiculum sp. nov. differs from the most similar species, P. stomachor Wieser, 1954, by the smaller number of turns of the amphidial fovea, the shorter tail and the beginning of the cuticle lateral differentiation (3/4 of the pharynx length vs. end of the pharynx, respectively). We also obtained the SSU rDNA sequence from Pomponema longispiculum sp. nov., which is closely related to Pomponema sp. (MN250093) by about 91%. Updated tabular keys to species identification of each genus (Biarmifer and Pomponema) are included, containing morphometric data, characters related to cuticle ornamentation, and copulatory structures. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
10. Cosmopolitism, rareness and endemism in deep-sea marine nematodes.
- Author
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Danovaro, R. and Gambi, C.
- Subjects
NEMATODES ,WATER depth ,NEMATOCIDES ,BIOSPHERE ,COSMOPOLITANISM ,OCEAN mining ,OCEAN - Abstract
Nematodes represent the most abundant benthic metazoan of all seas and oceans, and their relative importance increases with increasing water depth. Understanding the biodiversity patterns of this dominant phylum could be a critical step towards our comprehension of the evolutionary patterns across the largest biome of the biosphere. For instance, it has been assumed for a long time that nematodes are ubiquitous across depths, latitudes and biogeographic regions, but there is still little scientific evidence for this lack of endemism. The present study is based on a meta-analysis of nematode biodiversity data collected from 246 deep-sea sites of the Atlantic Ocean and Mediterranean Sea. We explored the cosmopolitanism, rareness and potential endemism of nematode genera in deep-sea sediments. The results of this analysis indicate that only one-third of nematode families are widely distributed and could potentially be cosmopolitan, whereas 94% of the nematode genera are linked to specific habitats or bathymetric ranges. Singleton nematode genera (i.e. genera presenting as a single individual only in one specific habitat) increased in importance with increasing water depth. We conclude that rareness and endemism may be a far more common feature than previously thought in deep-sea nematode assemblages and hypothesise that the deep ocean interior could be a huge reservoir of endemic nematode species. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
11. Two new species of Cyatholaimidae (Nematoda: Chromadorida) from the Southeastern Brazilian coast with emphasis on the pore complex and lateral pore-like structures
- Author
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Beatriz P. Cunha, Gustavo Fonseca, and Antonia Cecília Z. Amaral
- Subjects
Meiofauna ,Taxonomy ,Marine nematodes ,Tabular key ,SEM ,rDNA SSU ,Medicine ,Biology (General) ,QH301-705.5 - Abstract
Cyatholaimidae is a common and diverse family of mainly marine nematodes, potentially, with a large number of species to be discovered. The taxonomy of the group is marked by a lack of information about the evolutionary history of the characters and of detailed descriptions of morphological structures that may be taxonomically relevant. Two new species of the family are described from a sublittoral region in Southeastern Brazil, emphasizing the importance of the distribution and morphology of pore complex and pore-like structures present on the cuticle. The taxonomic importance of the cuticle ornamentation and spicule shape for the Biarmifer species, as well as the precloacal supplements structures of Pomponema species, are discussed. Biarmifer nesiotes sp. nov. differs from other species of the genus by the presence of eight longitudinal rows of pore complex on the cuticle and by the shape of the copulatory structure. Pomponema longispiculum sp. nov. differs from the most similar species, P. stomachor Wieser, 1954, by the smaller number of turns of the amphidial fovea, the shorter tail and the beginning of the cuticle lateral differentiation (3/4 of the pharynx length vs. end of the pharynx, respectively). We also obtained the SSU rDNA sequence from Pomponema longispiculum sp. nov., which is closely related to Pomponema sp. (MN250093) by about 91%. Updated tabular keys to species identification of each genus (Biarmifer and Pomponema) are included, containing morphometric data, characters related to cuticle ornamentation, and copulatory structures.
- Published
- 2023
- Full Text
- View/download PDF
12. The nematode genus Haliplectus Cobb, 1913 (Chromadorea: Haliplectidae): phylogenetic relationships, description of a new species from the Persian Gulf, southern Iran, and a tabular key to valid species.
- Author
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Gharahkhani, Azadeh, Pourjam, Ebrahim, Leduc, Daniel, and Pedram, Majid
- Subjects
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MANGROVE forests , *SPECIES , *MANGROVE plants , *SEXUAL dimorphism , *RECOMBINANT DNA - Abstract
Summary: The family Haliplectidae is reported from Iran for the first time and Haliplectus iranicus sp. n., from a mangrove forest in the Persian Gulf, is described. The new species is characterised by one ventromedian supplement near to cloacal aperture and a group of three supplements, 10-15 μ m anterior to cloacal opening, absence of protuberant caudal papillae and tail sexual dimorphism. A tabular key containing morphometric data and morphological information of 26 valid Haliplectus species is presented. Near full length SSU rDNA sequences are provided for H. iranicus sp. n. Our SSU analysis strongly indicates that Haliplectus does not belong to the order Plectida as in the current classification, and confirms the monophyly of Haliplectus based upon currently available data, but phylogenetic relationships of the genus remain uncertain. In fact, the classification of Haliplectidae is considered incerta sedis within the class Chromadorea. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
13. Coexisting cryptic species of the Litoditis marina complex (Nematoda) show differential resource use and have distinct microbiomes with high intraspecific variability.
- Author
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Derycke, S, De Meester, N, Rigaux, A, Creer, S, Bik, H, Thomas, WK, and Moens, T
- Subjects
Animals ,Nematoda ,Bacteria ,Escherichia coli ,DNA ,Bacterial ,RNA ,Ribosomal ,16S ,Sequence Analysis ,DNA ,Phylogeny ,Species Specificity ,Belgium ,Netherlands ,Microbiota ,bacteria ,coexistence ,diet ,individual niche specialization ,marine nematodes ,next-generation sequencing ,resource partitioning ,stabilizing effects ,Evolutionary Biology ,Biological Sciences - Abstract
Differences in resource use or in tolerances to abiotic conditions are often invoked as potential mechanisms underlying the sympatric distribution of cryptic species. Additionally, the microbiome can provide physiological adaptations of the host to environmental conditions. We determined the intra- and interspecific variability of the microbiomes of three cryptic nematode species of the Litoditis marina species complex that co-occur, but show differences in abiotic tolerances. Roche 454 pyrosequencing of the microbial 16S rRNA gene revealed distinct bacterial communities characterized by a substantial diversity (85-513 OTUs) and many rare OTUs. The core microbiome of each species contained only very few OTUs (2-6), and four OTUs were identified as potentially generating tolerance to abiotic conditions. A controlled experiment in which nematodes from two cryptic species (Pm1 and Pm3) were fed with either an E. coli suspension or a bacterial mix was performed, and the 16S rRNA gene was sequenced using the MiSeq technology. OTU richness was 10-fold higher compared to the 454 data set and ranged between 1118 and 7864. This experiment confirmed the existence of species-specific microbiomes, a core microbiome with few OTUs, and high interindividual variability. The offered food source affected the bacterial community and illustrated different feeding behaviour between the cryptic species, with Pm3 exhibiting a higher degree of selective feeding than Pm1. Morphologically similar species belonging to the same feeding guild (bacterivores) can thus have substantial differences in their associated microbiomes and feeding strategy, which in turn may have important ramifications for biodiversity-ecosystem functioning relationships.
- Published
- 2016
14. Three new species of Microlaimus (Nematoda: Microlaimidae) from the South Atlantic.
- Author
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Lima, Rita C., Neres, Patrícia F., and Esteves, André M.
- Subjects
NEMATODES ,CONTINENTAL shelf ,SEXUAL dimorphism ,SPECIES ,TESTIS ,GONADS - Abstract
Three new species of Microlaimus are described from the continental shelf of the Campos Basin, southwest Atlantic, Brazil. Microlaimus campiensis sp. n. differs from all other species in the presence of two anterior testes, slender spicules with enlarged proximal ends, 7-11 pre-cloacal papilliform supplements, and females with a pair of constriction structures, one on each branch of the ovary. Microlaimus alexandri sp. n. shows sexual dimorphism in the size of the amphidial fovea, which occupies 100% of the diameter of the corresponding area in the male; the buccal cavity provided with five teeth and a slightly cuticularized cuticular ring. Microlaimus vitorius sp. n. has four longitudinal-lateral rows of glands associated with small pores, one seta and three pores small pre-cloacal, and the gubernaculum has a triangular base. An amendment to the diagnosis of the genus is proposed, where the number of teeth was modified. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
15. The impact of intragenomic rRNA variation on metabarcoding‐derived diversity estimates: A case study from marine nematodes
- Author
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Tiago José Pereira, Alejandro De Santiago, Taruna Schuelke, Sarah M. Hardy, and Holly M. Bik
- Subjects
18S rRNA gene ,high‐throughput sequencing ,intragenomic variation ,marine nematodes ,metabarcoding ,Environmental sciences ,GE1-350 ,Microbial ecology ,QR100-130 - Abstract
Abstract Intragenomic rRNA variation is a critical concern for eukaryotic metabarcoding studies, due to its potentially confounding effects on species delimitation and biodiversity estimates derived from ‐Omics data. In the present study, we assessed patterns associated with 18S rRNA metabarcoding loci in marine nematodes, including characterization of intragenomic rRNA gene variants (number of variants and abundance profiles) and aspects of datasets that can obscure biological signals (e.g., amplification of nontarget DNA, ambiguous taxonomy assignments). We estimated amplicon sequence variants (ASVs) using DADA2 from an 18S rRNA metabarcoding dataset (Illumina MiSeq) generated from individual marine nematodes. Illumina data were analyzed in conjunction with nematode morphological identifications and nearly full‐length 18S reference sequences (~1,600 bp Sanger barcodes) generated for a subset of the same specimens. Our results indicated that levels of intragenomic rRNA variation appeared to vary widely across nematode taxa (irrespective of phylogenetic clades or ecological feeding groups) and that coamplification of nontarget DNA was common (relic DNA, gut contents, etc.). The DADA2 pipeline appeared to produce a biologically accurate profile of intragenomic rRNA variants in nematodes that was consistent with “Head‐Tail” patterns (of dominant vs. minor rRNA gene variants) identified in previous studies. Although intragenomic rRNA variation appears to be ubiquitous in marine nematodes, nematode identifications were highly congruent across our three methods for species delimitation (traditional morphological taxonomy, Sanger DNA barcoding, and high‐throughput metabarcoding). In spite of pervasive intragenomic variation and high copy number of rRNA genes, the most abundant ASVs in metabarcoding datasets are likely to represent true species barcodes and thus confer an accurate view of extant biodiversity. However, our findings also emphasize the importance of applying bioinformatic filtering techniques and developing well‐curated reference databases in order to better link rRNA molecules with specimen‐level data and alleviate the confounding effects of intragenomic gene variants in studies of microbial eukaryotes.
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- 2020
- Full Text
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16. Three new species of Microlaimus (Nematoda: Microlaimidae) from the South Atlantic
- Author
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Rita C. Lima, Patrícia F. Neres, and André M. Esteves
- Subjects
Marine nematodes ,Continental shelf ,MEIOFAUNA ,Campos basin ,New species ,Medicine ,Biology (General) ,QH301-705.5 - Abstract
Three new species of Microlaimus are described from the continental shelf of the Campos Basin, southwest Atlantic, Brazil. Microlaimus campiensis sp. n. differs from all other species in the presence of two anterior testes, slender spicules with enlarged proximal ends, 7–11 pre-cloacal papilliform supplements, and females with a pair of constriction structures, one on each branch of the ovary. Microlaimus alexandri sp. n. shows sexual dimorphism in the size of the amphidial fovea, which occupies 100% of the diameter of the corresponding area in the male; the buccal cavity provided with five teeth and a slightly cuticularized cuticular ring. Microlaimus vitorius sp. n. has four longitudinal-lateral rows of glands associated with small pores, one seta and three pores small pre-cloacal, and the gubernaculum has a triangular base. An amendment to the diagnosis of the genus is proposed, where the number of teeth was modified.
- Published
- 2022
- Full Text
- View/download PDF
17. New genus of Ironidae (Nematoda, Enoplida) from Piip volcano (the Bering Sea)
- Author
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Julia Zograf and Vladimir Mordukhovich
- Subjects
Marine nematodes ,Diversity ,Morphology ,Systematic ,Ironidae ,Bering sea ,Medicine ,Biology (General) ,QH301-705.5 - Abstract
Piipironus grandis gen. et sp. nov. is described from Piip submarine volcano, the Bering Sea. Piipironus gen. nov. shows all main characters of Thalassironinae but differs from all known ironids in the form of the amphid (spiral vs pocket-like) and the simultaneous presence of precloacal papilliform supplements and tubular postcloacal organs. Pared tubular postcloacal organs have never been described before for the family Ironidae. The combination of papilliform precloacal supplements and the pair of tubular postcloacal organs described for Piipironus grandis gen. et sp. nov. is unique among nematodes. The study of the nematofauna of the Piip submarine volcano began quite recently, and Piipironus is the second new genus of nematodes described from here from one sample of bottom sediments. This can be taken as one of the examples of the hyper-high diversity of marine nematodes.
- Published
- 2022
- Full Text
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18. New genus of Ironidae (Nematoda, Enoplida) from Piip volcano (the Bering Sea).
- Author
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Zograf, Julia and Mordukhovich, Vladimir
- Subjects
VOLCANOES ,NEMATODES ,SUBMARINE volcanoes ,SEDIMENT sampling - Abstract
Piipironus grandis gen. et sp. nov. is described from Piip submarine volcano, the Bering Sea. Piipironus gen. nov. shows all main characters of Thalassironinae but differs from all known ironids in the form of the amphid (spiral vs pocket-like) and the simultaneous presence of precloacal papilliform supplements and tubular postcloacal organs. Pared tubular postcloacal organs have never been described before for the family Ironidae. The combination of papilliform precloacal supplements and the pair of tubular postcloacal organs described for Piipironus grandis gen. et sp. nov. is unique among nematodes. The study of the nematofauna of the Piip submarine volcano began quite recently, and Piipironus is the second new genus of nematodes described from here from one sample of bottom sediments. This can be taken as one of the examples of the hyper-high diversity of marine nematodes. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
19. Revision of the genus Cobbionema Filipjev, 1922 (Nematoda, Chromadorida, Selachinematidae)
- Author
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Mohammed Ahmed, Sven Boström, and Oleksandr Holovachov
- Subjects
west coast of Sweden ,marine nematodes ,predatory ,stoma ,phylogeny ,Zoology ,QL1-991 ,Botany ,QK1-989 - Abstract
This paper reports on the genus Cobbionema Filipjev, 1922 in Sweden with the description of four species and a revision of the genus. Cobbionema acrocerca Filipjev, 1922 is relatively small in size, with a tail that has a conical proximal and a digitate distal section. Cobbionema cylindrolaimoides Schuurmans Stekhoven, 1950 is similar to C. acrocerca in most characters except having a larger body size and heavily cuticularized mandibles. Cobbionema brevispicula sp. nov. is characterised by short spicules and a conoid tail. Cobbionema acuminata sp. nov. is characterised by a long two-part spicule, a conical tail and three (one mid dorsal and two ventrosublateral) sharply pointed tines in the anterior chamber of the stoma that are located more anterior than in all the other species. We also present a molecular phylogeny of the family based on the nearly full-length 18S and the D2-D3 expansion segment of the 28S rRNA genes. Maximum Likelihood and Bayesian trees inferred from both genes strongly support a clade that included Cobbionema, Demonema Cobb, 1894 and Halichoanolaimus de Man, 1888 and another clade with Gammanema Cobb, 1920 and Latronema Wieser, 1954 nested together. None of the trees supported the monophyly of the subfamilies Choniolaiminae and Selachinematinae.
- Published
- 2020
- Full Text
- View/download PDF
20. Phylogenetic relationships of Leptolaimus de Man, 1876 (Plectida: Leptolaimidae) with description of two new species from the Persian Gulf, Iran.
- Author
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Gharahkhani, Azadeh, Pourjam, Ebrahim, Holovachov, Oleksandr, and Pedram, Majid
- Subjects
- *
INSECT anatomy , *MOLECULAR phylogeny , *SPECIES , *GENES , *RECOMBINANT DNA , *MORPHOLOGY - Abstract
Summary: Members of the family Leptolaimidae are reported for the first time from Iran with description of two new species of Leptolaimus from the Persian Gulf in the south of the country. Leptolaimus hormozganensis sp. n. is described based upon three populations. It differs from other Leptolaimus species in the position of the pharyngeal supplement and the number of precloacal tubular supplements and has a single sickle-shaped tubular pharyngeal supplement at mid-pharynx level in both sexes, 9-12 male precloacal supplements and one female preanal supplement. Leptolaimus dimorphus sp. n. is characterised by the presence of a pharyngeal tubular supplement only in some adults, one female preanal supplement and four male precloacal supplements. It differs from other species in that the pharyngeal supplement is only present in some specimens, presence of four male precloacal supplements, tail 50-59 μ m long and ventrosublateral position of vulva on either the right or left side of the body. Near full length SSU rDNA sequences are provided for L. hormozganensis sp. n. and two different males (one with, and one without, a pharyngeal supplement) of L. dimorphus sp. n. COI sequences for three populations of L. hormozganensis sp. n. from different regions of the Persian Gulf are also obtained. New sequences of two Leptolaimus species formed a clade with other sequenced Leptolaimus spp. and representatives of two genera of Leptolaimidae, i.e. , Aphanolaimus and Paraplectonema in a phylogeny based on SSU rDNA gene with 1.00/81 Bayesian posterior probability/maximum likelihood bootstrap (BPP/BS) values. Molecular phylogeny confirmed the synonymy of Leptolaimus and Halaphanolaimus that was formerly proposed based only on morphology. Based on SSU sequences and morphological characters, the presence of a pharyngeal supplement may not be a species-specific character and should not be used to differentiate genera. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
21. Natural stable isotope ratios and fatty acid profiles of estuarine tidal flat nematodes reveal very limited niche overlap among co-occurring species.
- Author
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Xiuqin Wu, Campinas Bezerra, Tania, Van Gansbeke, Dirk, and Moens, Tom
- Subjects
NEMATODES ,STABLE isotopes ,TIDAL flats ,MARINE species diversity ,FATTY acids ,SPECIES ,FOOD chains - Abstract
The high local-scale species diversity of marine meiofauna, and of nematodes in particular, has puzzled ecologists for decades. Both pronounced niche differentiation and neutral dynamics have been suggested as mechanisms underlying that high diversity. Differential resource use is the most plausible basis for niche differentiation, yet the vast majority of studies demonstrating that this is prominent in marine nematodes are based on laboratory experiments on single species or highly simplified assemblages. Only a small number of studies have investigated resource differentiation under natural conditions. Here we use natural stable-isotope ratios of carbon and nitrogen, as well as fatty-acid profiles, to assess differential resource use and trophic structure in nine abundant estuarine tidal flat nematode species, comprising different presumed feeding modes (deposit feeders, epistratum feeders, predators) and resource guilds (herbivores, carnivores) based on buccal cavity morphology. Nematodes comprise up to three different trophic levels (from primary to tertiary consumers), yet with the exception of some herbivores, omnivory is prominent. Bivariate isotopic niche spaces were of similar size among most species, irrespective of their trophic level. Herbivory not only contributed importantly to the nutrition of suspected herbivores, but also to that of species that were previously considered carnivores based on the morphology of their buccal cavity. Herbivory mainly targets diatoms in some nematode species, yet includes dinoflagellates in others. Bacteria, in contrast, appear to be of limited nutritional importance. Odontophora setosus is identified as a predator/omnivore (possibly of heterotrophic protists) with a trophic level in between that of secondary and tertiary consumers. Our study thus demonstrates that resource differentiation is pronounced among as well as within nematode feeding modes and resource guilds. However, this study included only the most abundant species of the in situ community, hence it remains to be established whether and to what extent its conclusions can be extrapolated to entire, often highly species-rich communities. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
22. Effects of seagrass (Cymodocea nodosa) restoration on nematode biodiversity.
- Author
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Gambi, Cristina, Corinaldesi, Cinzia, Dell'Anno, Antonio, and Danovaro, Roberto
- Subjects
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POSIDONIA , *SEAGRASSES , *SEAGRASS restoration , *COASTAL biodiversity , *RESTORATION ecology , *NUMBERS of species , *ANTHROPOGENIC effects on nature , *BIODIVERSITY , *ECOSYSTEMS - Abstract
Seagrass meadows are hot spots of biodiversity and play a key role in the provisioning of ecosystem goods and services but are often subjected to a regression due to a combination of multiple anthropogenic and climate-induced impacts. The ecological restoration of these habitat-forming species is a priority to reverse biodiversity loss and for the recovery of key ecosystem functions. Here we investigated the effects of seagrass (Cymodocea nodosa) restoration action on benthic biodiversity recovery assessed by a time-series analysis carried out for one year. We used nematode assemblages, the most widespread metazoan on global sediments, as a proxy of benthic biodiversity and compared the species richness, expected species number (ES51) and composition in donor and in restored seagrasses and in the adjacent unvegetated sediments. One year after the intervention, nematode biodiversity in restored seagrasses was more similar to that of the donor site than in unvegetated sediments, suggesting a progressive recovery. Overall, the nematode biodiversity of the restored seagrasses resulted in an intermediate level between unvegetated and pristine seagrass meadows, providing evidence that restoration intervention contributed to biodiversity recovery. Pristine and restored seagrass meadows hosted a high number of exclusive species, which resulted in an increase in the overall biodiversity in the investigated location. Our results indicate that the restoration of seagrass meadows has positive effects on benthic biodiversity and contributes to enhance the local biodiversity. • Nematode biodiversity in restored seagrasses recovers to values similar to the donor sites. • Pristine and restored seagrass meadows host a high number of exclusive species. • Seagrass restoration promotes high levels of benthic biodiversity. • Pristine and restored seagrasses enhance the local biodiversity of the coastal area. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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23. Environmental heterogeneity of cold seep by biological trait analysis of marine nematodes at Site F cold seep in South China Sea.
- Author
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Hu, Bingzhou, Wang, Qi, Liu, Jiwen, Xing, Lei, Zhang, Xin, Wang, Yuqing, and Liu, Xiaoshou
- Subjects
COLD seeps ,NEMATODES ,HETEROGENEITY ,WATER depth ,NEMATOCIDES ,SOCIAL influence ,BENTHOS - Abstract
Cold seeps provide high environmental heterogeneity for marine benthos. Site F is one of the active cold seeps in the South China Sea. In this study, free-living marine nematode communities were investigated at Site F and the adjacent deep-sea area. A total of 67 genera and 32 families were identified. The mean density at cold seep sites ranged from 13.6 to 181.8 ind./10 cm
2 , and that at the adjacent deep-sea sites ranged from 36.9 to 301.4 ind./10 cm2 . At cold seep sites, the most dominant nematode genera were Desmoscolex , Pierrickia , Sabatieria , Halalaimus , and Dorylaimopsis while at deep-sea sites, the most dominant genera were Retrotheristus , Thalassomonhystera , Desmoscolex , Cobbia , and Halalaimus. Deposit feeders of nematodes were dominant at all sites. Results of biological trait analysis showed that there was high environmental heterogeneity for nematodes at Site F. Water depth, sediment organic matter content, and sand proportion had important influences on nematode communities. • The deep-sea nematode Desmoscolex was found abundantly at the cold seep site. • Biological trait analysis showed high environmental heterogeneity at this site. • Water depth and sediment characteristics had significant effects on nematodes. • Organic matter caused changes in nematode diversity and functional differentiation. [ABSTRACT FROM AUTHOR]- Published
- 2024
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24. Meiofauna and free-living nematodes in volcanic sands of a remote South Atlantic, oceanic island (Trindade, Brazil).
- Author
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Santos, T.M.T. and Venekey, V.
- Abstract
This study presents patterns of spatial and temporal variation in the meiofaunal community and nematode associations on the volcanic sandy beaches of Trindade Island, a remote oceanic island in the South-east Atlantic Ocean. Samples were collected in August (rainy season) and December 2014 (dry season) on four beaches (Tartarugas, Parcel, Cabritos and Portugueses) at three zones of the intertidal (high, mid and low). A total of 10 meiofaunal groups were found. Copepods (31%) and nematodes (27%) dominated the meiofauna in all beaches and zones, regardless of the season. Nematodes were comprised mainly of non-selective deposit feeders, with a total of 27 genera from 12 families, with Cyatholaimidae, Xyalidae and Oncholaimidae as the most diverse and abundant. Significant differences were found in the meiofaunal community, as well as in nematode associations, among seasons and intertidal zones but not among beaches. The sediment characteristics were the main drivers regulating the structure of meiobenthic fauna in Trindade Island. Our findings are also compared to other studies focusing on the meiofauna and nematodes of oceanic islands with carbonate and volcanic sediments; the major patterns are herein presented. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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25. Determination of food sources for nematodes in the Kuril Basin and eastern slope of the Kuril Islands by stable isotope and fatty acid analyses.
- Author
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Mordukhovich, Vladimir V., Kiyashko, Serguei I., Kharlamenko, Vladimir I., and Fadeeva, Nataliya P.
- Subjects
- *
NEMATODES , *MARINE worms , *FATTY acids , *ORGANIC compounds , *BACTERIA - Abstract
Abstract Little is known about the diet and feeding strategies of deep-sea nematodes. In this study, we investigated the trophic ecology of several macrobenthic nematode species in the abyssal zone of the Sea of Okhotsk and adjacent northwest Pacific by means of stable isotope and fatty acid analyses. A wide range of δ13C and δ15N values was found, with δ13C values ranging from −37.8 to −16.4‰ and δ15N values ranging from 5.7 to 19.2‰. The fatty acid composition of the nematode species demonstrated high variation. Planktonic FAs were found in high abundance in the nematodes at all stations, with values ranging from 31% to 34% (Metoncholaimus sp.) to 59% (Synonchinae gen. sp.). The abundance of bacterial FAs ranged from 13% to 22%. The isotopic and FA signatures exhibited a wide range of food sources in the nematode diet and highlighted the importance of sediment bacteria in the diet. The depleted isotopic signatures coupled with the increased abundance of bacterial FAs suggest that chemosynthetically derived organic matter can be an important carbon source for macrobenthic nematodes in the Kuril Basin. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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26. Nematode‐associated microbial taxa do not correlate with host phylogeny, geographic region or feeding morphology in marine sediment habitats.
- Author
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Schuelke, Taruna, Pereira, Tiago José, Hardy, Sarah M., and Bik, Holly M.
- Subjects
- *
MICROORGANISMS , *NEMATODES , *MARINE sediments , *MARINE habitats , *ABIOTIC environment - Abstract
Abstract: Studies of host‐associated microbes are critical for advancing our understanding of ecology and evolution across diverse taxa and ecosystems. Nematode worms are ubiquitous across most habitats on earth, yet little is known about host‐associated microbial assemblages within the phylum. Free‐living nematodes are globally abundant and diverse in marine sediments, with species exhibiting distinct buccal cavity (mouth) morphologies that are thought to play an important role in feeding ecology and life history strategies. Here, we investigated patterns in marine nematode microbiomes, by characterizing host‐associated microbial taxa in 281 worms isolated from a range of habitat types (deep‐sea, shallow water, methane seeps, Lophelia coral mounds, kelp holdfasts) across three distinct geographic regions (Arctic, Southern California and Gulf of Mexico). Microbiome profiles were generated from single worms spanning 33 distinct morphological genera, using a two‐gene metabarcoding approach to amplify the V4 region of the 16S ribosomal RNA (rRNA) gene targeting bacteria/archaea and the V1–V2 region of the 18S rRNA gene targeting microbial eukaryotes. Contrary to our expectations, nematode microbiome profiles demonstrated no distinct patterns either globally (across depths and ocean basins) or locally (within site); prokaryotic and eukaryotic microbial assemblages did not correlate with nematode feeding morphology, host phylogeny or morphological identity, ocean region or marine habitat type. However, fine‐scale analysis of nematode microbiomes revealed a variety of novel ecological interactions, including putative parasites and symbionts, and potential associations with bacterial/archaeal taxa involved in nitrogen and methane cycling. Our results suggest that in marine habitats, free‐living nematodes may utilize diverse and generalist foraging strategies that are not correlated with host genotype or feeding morphology. Furthermore, some abiotic factors such as geographic region and habitat type do not appear to play an obvious role in structuring host–microbe associations or feeding preferences. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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27. THE INFLUENCE OF TIDAL AND RAINFALL CYCLES ON INTERTIDAL NEMATODES: A CASE STUDY IN A TROPICAL SANDY BEACH
- Author
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Virag Venekey, Paulo Jorge Parreira dos Santos, and Verônica Gomes da Fonsêca-Genevois
- Subjects
Brazil ,Intertidal environment ,Marine nematodes ,Meiobenthos ,Seasonal variations ,Tides ,Oceanography ,GC1-1581 - Abstract
The present study describes the nematode assemblage of the bay of Tamandaré (Brazil), a tropical sandy beach, during the low, flood, high and ebb tides of two consecutive tidal cycles in four different months of the year (May, July, September and November). The nematode assemblage was dominated by Metachromadora and Perepsilonema and varied significantly between months and tides. Densities were lower in July, and changes in assemblage structure occurred during the transitional periods between rainy and dry months, which showed the influence of rainfall. Flood and ebb tides appeared to exercise the greatest influences over the tidal cycle, although the patterns were not very clear. Identification at genera/species level is recommended for future studies, to better understand the patterns of nematode assemblages during tidal cycles.
- Published
- 2014
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28. Morphological and molecular identification of four new species of marine nematodes.
- Author
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Salma, J., Nasira, K., Saima, M., and Shahina, F.
- Subjects
NEMATODES ,MARINE worms - Abstract
Marine nematodes play a vital role in the ecosystem of seas and estuaries as a diverse species, universally rich and often showing sensitive responses to ecological changes. During present study, surveys were conducted at four locations of Sindh coast viz., Kaemari, Korangi Creek, Ibrahim Haidry, Mubarak Village and two of Balochistan coast viz., Gadani and Sonmiani beach. As a result, four new species Oncholaimus paraoxyuris n. sp., Metoncholaimus medispiculatum n. sp., Theristus (P) karachiense n. sp. and Theristus cylindricus n. sp. were found. O. paraoxyuris, M. medispiculatum and T. karachiense were molecularly identified on the basis of 18S ribosomal gene with accession numbers KY497017, KY979964 and KY979968, respectively. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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29. Nematode Responses to the Invasion of Exotic Spartina in Mangrove Wetlands in Southern China.
- Author
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Fu, Sujing, Cai, Lizhe, Cao, Jing, and Chen, Xinwei
- Subjects
NEMATODES ,MANGROVE forests ,MARSH ecology ,SPARTINA alterniflora ,SPARTINA ,MEIOFAUNA - Abstract
Investigations into nematode density and species assemblages have been conducted in different types of mangroves worldwide, but these studies have typically been limited to one type of plant or tree species. The invasive salt marsh grass Spartina alterniflora has successively invaded native mangroves along the southern coasts of China during the preceding two decades. However, few meiofauna studies on the impacts of S. alterniflora have been conducted, and the consequences of this invasion on ecosystem composition and function remain unclear. The hypothesis of this study was that the spatial and seasonal distribution of nematode assemblages vary significantly among three native mangrove habitats ( Kandelia obovata, Aegiceras corniculatum, and Avicennia marina) and between these habitats and a fourth habitat that was colonized by S. alterniflora, in Zhangjiang Estuary, China. Our results demonstrated that different species dominated in different habitats seasonally. Highly significant differences in density, number of species, diversity index, and maturity index were present among the four habitats. ANOSIM results revealed that there were significant differences in nematode assemblages among the four habitats and seasons, with the S. alterniflora habitat exhibiting the lowest mean values of number of species, Shannon-Wiener diversity index, richness index, and maturity index in the four seasons. This suggests that the presence of S. alterniflora disrupted nematode assemblages. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
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30. Lack of population genetic structure in the marine nematodes Ptycholaimellus pandispiculatus and Terschellingia longicaudata in beaches of the Persian Gulf, Iran.
- Author
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Sahraean, Narjes, Van Campenhout, Jelle, Rigaux, Annelien, Mosallanejad, Hadi, Leliaert, Frederik, and Moens, Tom
- Subjects
- *
POPULATION genetics , *NEMATODES , *AQUATIC biodiversity , *GENE flow , *COSMOPOLITANISM , *FISHES - Abstract
We investigated genetic diversity and population genetic structure of two common benthic nematode species, Ptycholaimellus pandispiculatus and Terschellingia longicaudata, from sandy beaches in the area of Bandar Abbas (Iran), Persian Gulf. Based upon partial mitochondrial cytochrome oxidase c subunit 1 ( COI) gene data, 17 and two haplotypes were found for P. pandispiculatus and Te. longicaudata, respectively. Analysis of molecular variance did not reveal a significant population genetic structure for either species. The absence of genetic structuring indicates substantial dispersal and gene flow in our study area. To assess the species structure of Te. longicaudata at a larger geographic scale, we compared 18S rDNA and COI sequences from Iran and the Scheldt Estuary in The Netherlands to ascertain whether they truly belong to the same species. Our data confirmed previous studies that Te. longicaudata likely constitutes a complex of multiple cryptic species, with one of these species having a (near) cosmopolitan distribution. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
31. Influence of the tidal and rainfall cycles on the population structure and density of Mesacanthion hirsutum gerlach (nematoda, thoracostomopsidae) on a tropical sandy beach (Tamandaré Bay, Pernambuco, Brazil)
- Author
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Virag Venekey, Verônica Gomes da Fonsêca-Genevois, and Paulo Jorge Parreira dos Santos
- Subjects
Nematode marinhos ,Meiobentos ,Ambiente entremarés ,Variações sazonais ,Brasil ,Marine nematodes ,Meiobenthos ,Intertidal environment ,Seasonal variations ,Brazil ,Oceanography ,GC1-1581 - Abstract
The population structure (males, females and juveniles) and density of Mesacanthion hirsutum Gerlach were studied during the tides (low, flood, high and ebb) of two consecutive tidal cycles in four different months of the year (May, July, September and November). Mesacanthion hirsutum density variations showed association with the rainfall cycle, with lower densities during July and September and significantly higher values in May and November. The population structure was constituted mostly by juveniles indicating a continuous reproduction during all the studied period. There were no significant differences between light and dark periods of the day, however, the higher densities detected during the high and ebb tidal stages demonstrate that this species could be dispersing through the water column and/or migrating within the sediment.A estrutura populacional (machos, fêmeas e juvenis) e densidade de Mesacanthion hirsutum Gerlach foram estudadas durante as marés (baixa, enchente, alta e vazante) de dois ciclos de maré consecutivos, em quatro meses diferentes do ano (Maio, Julho, Setembro e Novembro). As variações de densidade de Mesacanthion hirsutum mostraram associação com o ciclo de chuvas, com densidades mais baixas durante Julho e Setembro e significativamente maiores em Maio e Novembro. A estrutura populacional constituiu-se em sua maior parte por juvenis indicando uma reprodução continua durante todo o período de estudo. Não foram encontradas diferenças significativas entre os períodos claros e escuros do dia, contudo maiores densidades foram detectadas durante as marés altas e vazantes demonstrando que a espécie pode estar se dispersando através da coluna d'água e/ou migrando dentro do sedimento.
- Published
- 2011
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32. Spatio-temporal study and population structure of Daptonema Oxycerca (Nematoda: Xyalidae) in Coroa Grande, Rio de Janeiro, Brazil
- Author
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Tatiana F. Maria, Neyvan R. R. da Silva, Adriane P. Wandeness, and André M. Esteves
- Subjects
Daptonema ,Nematódeos marinhos ,Estrutura populacional ,Baía de Sepetiba ,Marine nematodes ,Population structure ,Sepetiba Bay ,Oceanography ,GC1-1581 - Abstract
Daptonema oxycerca was originally described from the North Sea and, up to now, nothing is known of this species in tropical regions. The spatio-temporal distribution and the population structure of this species was studied during one-year period (from May 1998 through April 1999) in Coroa Grande, Rio de Janeiro, Brazil. For sampling, two fixed, parallel transects were established perpendicularly to the shoreline, and at each transect, four, equally spaced levels were marked to represent the upper and the low intertidal zones. The lowest temperatures occurred in the end of the austral winter and first month of the spring and the highest temperatures occurred in the austral summer. The density of D. oxycerca varied during the year, with a peak in August. This tendency was observed for males, ovigerous females, and non-ovigerous females. The species density was negative correlated with temperature. The sex ratio was not statistically significant. D. oxycerca was most abundant at the upper intertidal level in both transects. This work provides the first record of D. oxycerca in Brazil, and confirms the influence of temperature in regulating its population density.Daptonema oxycerca foi descrita originalmente para o Mar do Norte, mas até o momento nada se conhece sobre essa espécie em regiões tropicais. A distribuição espaço-temporal e a estrutura populacional de D. oxycerca foram estudadas durante o período de um ano (de Maio 1998 a Abril 1999) em Coroa Grande, Rio de Janeiro, Brasil. Para a amostragem, dois transectos fixos e perpendiculares à linha d'água foram estabelecidos, e, em cada transecto, quatro níveis foram marcados para representar as zonas superior e inferior do médiolitoral. As menores temperaturas foram observadas no final do inverno e início da primavera e as maiores temperaturas no verão. A densidade de D. oxycerca variou durante o ano, com um pico em agosto. Essa tendência foi observada para os machos, as fêmeas grávidas e as fêmeas não-grávidas. A densidade da espécie correlacionou-se negativamente com a temperatura. A variação da razão sexual não foi significativa. D. oxycerca foi mais abundante no nível superior do médiolitoral em ambos os transectos. Esse trabalho representa o primeiro registro de D. oxycerca no Brasil, assim como, confirma a influência da temperatura na regulação de sua densidade populacional.
- Published
- 2008
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- View/download PDF
33. Bioassessment of environmental quality based on taxonomic and functional traits of marine nematodes in the Bohai Sea, China.
- Author
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Hua, Er, He, Lei, Zhang, Zhinan, Cui, Chunyan, and Liu, Xiaoshou
- Subjects
NEMATODES ,ENVIRONMENTAL quality ,BIOINDICATORS ,NEMATOCIDES ,ECOLOGICAL disturbances ,SPATIAL variation ,ENVIRONMENTAL sciences - Abstract
Free-living marine nematodes are valuable biological indicators for different environmental disturbances. Their taxonomic composition and functional traits often respond to environmental changes. In this study, marine nematodes, collected from the Bohai sea on the northeastern coast of China in 2014, were investigated in terms of their taxonomic composition and functional traits. Furthermore, the environmental quality of the investigated area was assessed based on nematode metrics. The studied nematode community showed spatial variation in taxonomic and functional composition, in response to changes in environmental variables such as sediment chlorophyll-a, phaeophytin-a, organic matter content, silt-clay content etc. Overall, high percentage of tolerant marine nematodes species or colonizers predominated, suggesting a disturbed environmental condition of the study area. Further results from the environmental quality assessment based on nematode metrics indicated a moderate quality status at the most investigated stations. • Nematodes contributed to the indication of certain disturbed habitats. • Nematodes reflected the influence of river discharge and land-based pollution. • Tolerant species or colonizers predominated the studied nematode communities. • Most investigated stations had moderate environmental quality status. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
34. New and known species of the genus Desmodora De Man, 1889 (Nematoda: Desmodoridae) from the hydrothermal vent communities of the Piip volcano (south-west Bering Sea).
- Author
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Mordukhovich, V.V., Fadeeva, N.P., Semenchenko, A.A., Kiyashko, S.I., and Scripova, E.R.
- Subjects
- *
HYDROTHERMAL vents , *VOLCANOES , *NEMATODES , *BIOLOGICAL classification , *MICROBIAL mats , *HABITATS , *SUBMARINE volcanoes - Abstract
Species of the marine nematode of the genus Desmodora have been found to dominate (up to 78%) in the nematode fauna from the hydrothermal vent communities of submarine Piip volcano, Bering Sea. The morphological characteristics and molecular genetic data of Desmodora specimens from different habitats of the volcano were studied and three new and one known species have been described: Desmodora hydrothermica sp.nov. , Desmodora marci, Desmodora spongiophila sp.nov., Desmodora spongiocola sp.nov. The species often lived together, but a pronounced spatial specialization was observed. Desmodora spongiophila sp.nov. and Desmodora spongiocola sp.nov. were abundant inhabitants of the vulcanellids and some hexactenellids. Desmodora hydrothermica sp.nov. dominated in microbial mats on the carbonate chimneys from the South Summit, while Desmodora marci was found on stones near vents and in bottom sediments with Calyptogena pacifica (Bivalvia: Vesicomyidae). The last two species were already known in deep-sea reduced environments of the Pacific and Atlantic oceans, in similar habitats. The δ13C and δ15N values and fatty acids composition of Desmodora samples from hydrothermal habitats confirmed the consumption of chemosynthetically derived organic matter. SSU and D2-D3 of LSU phylogenetic trees largely agree with those of previous analyses indicating that Desmodora is not monophyletic. Moreover, phylogenetic relationships within the subfamily Desmodorinae remained unresolved. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
35. Deep subsurface mine stalactites trap endemic fissure fluid Archaea, Bacteria and Nematoda possibly originating from ancient (inland) seas.
- Author
-
Gaetan eBorgonie, Borja eLinage-Alvarez, Abidemi eOjo, Steven eShivambu, olukayode ekuloyo, Errol Duncan Cason, Sihle eMaphanga, Jan-G eVermeulen, Derek eLitthauer, Colin Dunlop Ralston, Tullis eOnstott, Barbara eSherwood-Lollar, and Esta eVan Heerden
- Subjects
Archaea ,subsurface ,diversity ,Eukarya ,Marine nematodes ,Stalactites ,Microbiology ,QR1-502 - Abstract
Stalactites (CaCO3 and salt) from water seeps are frequently encountered in ceilings of mine tunnels whenever they intersect water-bearing faults or fractures. To determine whether stalactites could be mineralized traps for indigenous fracture water microorganisms, we analyzed stalactites collected from three different mines ranging in depth from 1.3 to 3.1 km. During sampling in Beatrix gold mine (1.4 km beneath the surface), central South Africa, CaCO3 stalactites growing on the mine tunnel ceiling were collected and discovered, in two cases, to contain a living obligate brackish water/marine nematode species, Monhystrella parvella. After sterilization of the outer surface, mineral layers were physically removed from the outside to the interior, the DNA extracted. Based upon 16S and 18S rRNA gene sequencing, Archaea, Bacteria and Eukarya in different combinations were detected for each layer. . Using CT scan and electron microscopy the inner structure of CaCO3 and salt stalactites were analyzed. CaCO3 stalactites show a complex pattern of lamellae carrying bacterially precipitated mineral structures. Nematoda were clearly identified between these layers confirming that bacteria and nematodes live inside the stalactites and not only in the central straw. Salt stalactites exhibit a more uniform internal structure. Surprisingly, several Bacteria showing highest sequence identities to marine Bacteria were identified. This, together with the observation that the nematode M. parvella recovered from Beatrix gold mine stalactite can only survive in a salty environment makes the origin of the deep subsurface colonization enigmatic. The possibility of a Permian origin is discussed. Our results indicate stalactites are suitable for biodiversity recovery and act as natural traps for microorganisms in the fissure water long after the water that formed the stalactite stopped flowing.
- Published
- 2015
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36. Cryptic diversity and ecosystem functioning: a complex tale of differential effects on decomposition.
- Author
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De Meester, N., Gingold, R., Rigaux, A., Derycke, S., and Moens, T.
- Subjects
- *
MARINE ecology , *COMPETITION (Biology) , *BIODEGRADATION , *SPECIES specificity , *NEMATODES , *SPECIES diversity , *EXTRACELLULAR enzymes - Abstract
Marine ecosystems are experiencing accelerating population and species loss. Some ecosystem functions are decreasing and there is growing interest in the link between biodiversity and ecosystem functioning. The role of cryptic (morphologically identical but genetically distinct) species in this biodiversity-ecosystem functioning link is unclear and has not yet been formally tested. We tested if there is a differential effect of four cryptic species of the bacterivorous nematode Litoditis marina on the decomposition process of macroalgae. Bacterivorous nematodes can stimulate or slow down bacterial activity and modify the bacterial assemblage composition. Moreover, we tested if interspecific interactions among the four cryptic species influence the decomposition process. A laboratory experiment with both mono- and multispecific nematode cultures was conducted, and loss of organic matter and the activity of two key extracellular enzymes for the degradation of phytodetritus were assessed. L. marina mainly influenced qualitative aspects of the decomposition process rather than its overall rate: an effect of the nematodes on the enzymatic activities became manifest, although no clear nematode effect on bulk organic matter weight loss was found. We also demonstrated that species-specific effects on the decomposition process existed. Combining the four cryptic species resulted in high competition, with one dominant species, but without complete exclusion of other species. These interspecific interactions translated into different effects on the decomposition process. The species-specific differences indicated that each cryptic species may play an important and distinct role in ecosystem functioning. Functional differences may result in coexistence among very similar species. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
37. Dracograllus trukensis sp. nov. (Draconematidae: Nematoda) from a seagrass bed ( Zostera spp.) in Chuuk Islands, Micronesia, Central Western Pacific Ocean.
- Author
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Min, Wongi, Kim, Dongsung, Decraemer, Wilfrida, and Rho, Hyun
- Abstract
A new species of free-living marine draconematid nematode, Dracograllus trukensis sp. nov., is described based on the specimens collected from the sediments of a intertidal seagrass bed from Chuuk Islands, Micronesia. Dracograllus trukensis sp. nov. differs from other species of the genus by the combination of the following characteristics: the presence of numerous minute spiny ornamented body cuticular annules in both sexes, eight cephalic adhesion tubes inserted on the head capsule in both sexes, the presence of stiff posteriorly directed setae anterior to posterior adhesion tubes in both sexes, the shape (large, elongated, open loop-shaped in male and large, elongated, closed loop-shaped in female) and position (longer ventral arm extending to the first body annule in male) of amphideal fovea, shorter spicule length (34-42 μm), the presence of sexual dimorphism in shape and length of the non-annulated tail terminus, and number of posterior sublateral adhesion tubes (10 in male and 13-15 in female) and posterior subventral adhesion tubes (8-10 in male and 9-11 in female). A comparative table on the biogeographical and ecological characteristics of the species of Dracograllus is presented. This is the first taxonomic report on the genus Dracograllus from Chuuk Islands, Micronesia, central western Pacific Ocean. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
38. Is maturity index an efficient tool to assess the effects of the physical disturbance on the marine nematode assemblages?-A critical interpretation of disturbance-induced maturity successions in some study cases in Maldives.
- Author
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Semprucci, F., Colantoni, P., and Balsamo, M.
- Abstract
Maturity index (MI), based on nematode life strategies, has been proposed in 1990 to assess the possible variations of the terrestrial and freshwater nematode assemblages induced by anthropogenic activities. It was subsequently applied also to marine ecosystems and, even if comparatively not yet very popular, it offers a good method to assess the ecological quality in relation to a wide range of anthropogenic drivers. However, few data are available on its response to physical stress, a key factor especially in the coastal areas. In this study, marine nematode genera from two study cases carried out in Maldives are used to test both MI and life strategy traits (i.e., c-p classes) for detecting the effects of physical disturbance. The results confirm that nematodes are well adapted to physical stress showing a general high rate of recovery. C-p scaling and MI did not seem to be appropriate for revealing this disturbance type probably because there are no empirical evidences on the life strategy of several genera, and a possible differential response to various disturbance types may be hypothesized. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
39. Patterns in nematode community during and after experimentally induced anoxia in the northern Adriatic Sea.
- Author
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Taheri, Mehrshad, Grego, Mateja, Riedel, Bettina, Vincx, Magda, and Vanaverbeke, Jan
- Subjects
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NEMATODES , *BIOTIC communities , *ANOXIC waters , *COASTAL ecosystem health - Abstract
The effect of short and long-term induced anoxia on a benthic nematode community and its potential for recovery after reoxygenation were investigated in an in situ experiment on a silty-sand bottom in the Gulf of Trieste, the northern Adriatic Sea. Anoxia was created artificially by three underwater benthic Plexiglas chambers at a depth of 24 m. Treatments lasted for 2, 23 and 307 days. Control samples (Normoxia) were taken on 3 (Normoxia 1) and 25 (Normoxia 2) August 2010 outside the chambers (4–5 m further). After opening the chambers, recovery cores were taken after 7 days (Anoxia 2D), 30 days (Anoxia 23D) and 90 days (Anoxia 307D). Our results revealed that short-term anoxia (Anoxia 2D) did not affect nematode total density and diversity, community structure and their vertical distribution in the sediment. However, total and vertical nematode density, species richness and diversity decreased at 23 days and decreased further at 307 days anoxia. Some nematode species like Metalinhomoeus effilatus, Paralinhomoeus caxinus and Terschellingia longicaudata even survived at 307 days anoxia treatment. Our results also demonstrated that nematode community exposed to 23 days anoxia did not recover after 30 days sediment reoxygenation but, a full recovery was observed after 90 days for nematode community exposed to 307 days anoxia. Feeding type contribution (functional aspect) of the nematode community also changed at the anoxia treatments and during the recovery process. This change was most drastic at the Anoxia 23D and 307D treatments. At both Normoxia and Anoxia 2D treatments, selective deposit feeders (1A), non-selective deposit feeders (1B) and epistrate (diatom) feeders (2A) nematodes were observed in the dominant nematode community. Epistrate feeders disappeared from in the Anoxia 23D treatment epistrate and also selective deposit feeders did not belong to the dominant nematode species in the Anoxia 307D treatment. After the recovery process, epistrate feeders and selective deposit feeding nematodes reappeared again amongst the dominant nematode species after 30 and 90 days of recovery, respectively. [ABSTRACT FROM AUTHOR]
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- 2015
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40. Two new free-living marine nematode species from an intertidal sandy-rocky shore on Pulau Ubin, Singapore with a key to the valid species of the genera Prooncholaimus and Acanthonchus.
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Chen Cheng-Ann, Nguyen Dinh Tu, and Nic Smol
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NEMATODES , *SYMPATRIC speciation , *SETAE , *SPICULE (Anatomy) , *BIOLOGICAL classification - Abstract
Marine nematodes belonging to two genera Prooncholaimus and Acanthonchus are described from Tanjung Tajam on the westernmost end of Pulau Ubin in the East Johor Strait. Prooncholaimus tani new species is characterised by having short cervical setae, a large buccal cavity, pocket-shaped amphid, thin gubernaculum and curved, L-shaped spicules. Acanthonchus singaporensis new species has a cuticle striated with transverse rows of minute punctations but is irregular laterally at the posterior region; cervical setae are present posterior to the amphid, the latter being multispiral with a total of 5.5 turns. Spicules are paired, cuticulatised. The gubernaculum is also paired and almost equal length to the spicules. Six tubular supplements are present with the most anterior large and heavily cuticularised with a hook near the posterior end of the supplement. [ABSTRACT FROM AUTHOR]
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- 2015
41. Two new nematodes, Pseudelzalia longiseta gen. nov., sp. nov. and Paramonohystera sinica sp. nov. (Monhysterida: Xyalidae), from sediment in the East China Sea.
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Yu, Tingting and Xu, Kuidong
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NEMATODES , *ANIMAL species , *MARINE sediments , *TAXONOMY , *ANIMAL genetics - Abstract
Pseudelzalia longisetagen. nov, sp. nov. andParamonohystera sinicasp. nov. from subtidal sediment in the East China Sea are described.Pseudelzaliais characterized by 6 labial papillae and 10 cephalic setae, cylindrical buccal cavity, elongate (>2 anal body diameter) spicules, and conico-cylindrical tail devoid of terminal setae. It differs fromElzaliaby the absence of terminal setae.Pseudelzalia longisetasp. nov. is 647–853 μm long, has 7–8 μm long cervical setae, 11–14 μm long caudal setae, 25–41 μm long spicules about 2.1–2.7 anal diameter, and pointed tail-tip.Paramonohystera sinicapossesses 12 cephalic setae, a character found in four congeners:Paramonohysterabuetschlii(Bresslau and Schuurmans Stekhoven in Schuurmans Stekhoven, 1935,ParamonohysterapilosaBoucher, 1971,ParamonohysteraconcinnaLorenzen, 1977 andParamonohysterahalerbaFadeeva and Belogurov, 1987. It differs fromP.buetschliiby shorter body (933–1023 μm versus 2000–2200 μm); fromP.pilosaby the much shorter spicules (79–88 μm versus 167 μm) and narrower head (13–16 µm versus 32 µm); fromP.concinnaby smooth cephalic setae (versus segmented); and fromP.halerbaby the absence of two rows of setae on the ventral side of the tail (versus present). Based on the evaluation of nominal species, we recognize 14 valid species and provide an emended diagnosis and a tabular key forParamonohystera. http://www.zoobank.org/urn:lsid:zoobank.org:pub:474B8F17-AED7-4078-8176-DFC499B78526 [ABSTRACT FROM AUTHOR]
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- 2015
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42. Two new species of Trophomera Rubtzov & Platonova, 1974 (Nematoda: Plectida: Benthimermithidae) from the Clarion-Clipperton Fracture Zone, North Pacific
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Shimada, Daisuke, Takeda, Naoya, Tsune, Akira, Murakami, Chisato, Department of Biology, Keio University, and Department of Biological Sciences, Hokkaido University
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marine nematodes ,Trophomera mangani sp. nov ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,CCFZ ,Deep sea ,Taxonomy ,Trophomera fodinae sp. nov - Abstract
International audience; Two new species of the genus Trophomera Rubtzov & Platonova, 1974 (Nematoda: Plectida: Benthimermithidae) from the deep-sea bottom of the Clarion-Clipperton Fracture Zone, North Pacific are described. Trophomera mangani sp. nov. differs from its congeners in terms of its large body size, preamphidial cervical lateral alae extending the whole distance from the cephalic apex to amphid, a cone-shaped tail with a terminal spine, and reproductive system with two testes arranged consecutively in tandem and connected by a joint spermaduct. Trophomera fodinae sp. nov. can be distinguished from its congeners by its setiform cephalic sensilla, a pharynx that connects with the anterior end of the trophosome, a rounded tail with a terminal spine possessing additional cuticular layers and granular inclusions, the presence of an anus and a rectum, the anterior position of the vulva, and its short reproductive system with two telogonic reflected ovaries. Dichotomous keys to male and female of Trophomera are provided.; Deux nouvelles espèces du genre Trophomera Rubtzov & Platonova, 1974 (Nematoda : Plectida : Benthimermithidae) des fonds marins de la zone de fracture de Clarion-Clipperton dans le nord Pacifique sont décrites. Trophomera mangani sp. nov. diffère de ses congénères par sa large taille, ses ailes latérales cervicales préamphidiales s’étendant sur toute la distance de l’apex céphalique à l’amphide, une queue en forme de cône avec une épine terminale et un système reproducteur avec deux testicules disposés consécutivement en tandem et reliés par un spermaduct. Trophomera fodinae sp. nov. se distingue de ses congénères par sa sensille céphalique sétiforme, un pharynx qui se connecte à l’extrémité antérieure du trophosome, une queue arrondie avec une épine terminale possédant des couches cuticulaires supplémentaires et des inclusions granulaires, la présence d’un anus et d’un rectum, la position antérieure de la vulve et son système reproducteur court avec deux ovaires télogoniques réfléchis. Les clés dichotomiques mâles et femelles sont fournies.
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- 2021
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43. Deep-Sea Nematodes of the Mozambique Channel: Evidence of Random Community Assembly Dynamics in Seep Sediments
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Ann Vanreusel, Lara Macheriotou, Annelien Rigaux, Daniela Zeppilli, Sofie Derycke, and Karine Olu
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0106 biological sciences ,Nematoda ,MEIOBENTHOS ,Science ,Ocean Engineering ,Biology ,QH1-199.5 ,Aquatic Science ,ECOLOGY ,Oceanography ,010603 evolutionary biology ,01 natural sciences ,Deep sea ,Bathyal zone ,Abyssal zone ,ECOSYSTEMS ,MARINE NEMATODES ,14. Life underwater ,Water Science and Technology ,Global and Planetary Change ,MUD-VOLCANO ,Ecology ,010604 marine biology & hydrobiology ,Pockmark ,Community structure ,PHYLOGENETIC STRUCTURE ,General. Including nature conservation, geographical distribution ,Biology and Life Sciences ,phylogenetic community structure ,Cold seep ,Petroleum seep ,metabarcoding ,PATTERNS ,cold seeps ,Species richness ,community structure - Abstract
Cold seeps occur globally in areas where gases escape from the seafloor, occasionally resulting in the formation of topographic depressions (pockmarks), characterised by unique physicochemical conditions such as anoxic and sulphuric sediments. Free-living marine nematodes tend to dominate the meiofaunal component in such environments, often occurring at extremely high densities and low richness; the mechanisms defining community assembly in areas of fluid seepage, however, have received little attention. Here we focus on a low-activity pockmark at 789 m in the Mozambique Channel (MC). We assessed the diversity, co-occurrence patterns and phylogenetic community structure of nematodes at this bathyal site to that of a nearby reference area as well as abyssal sediments using metabarcoding. In addition, we compared our molecularly-derived diversity estimates to replicate samples identified morphologically. Overall, nematode Amplicon Sequence Variants (ASVs) and generic richness were similar between Pockmark and Abyssal sediments, but lower compared to the Reference area. Although more than half the genera were shared, over 80% of ASVs were unique within each area and even within each replicate core. Even though both methodologies differentiated the Pockmark from the Reference and Abyssal sites, there was little overlap between the molecularly and morphologically identified taxa, highlighting the deficit of reference sequences for deep-sea nematodes in public databases. Phylogenetic community structure at higher taxonomic levels was clustered and did not differ between the three areas yet analysis within three shared and dominant genera (Acantholaimus, Desmoscolex, Halalaimus), revealed randomness with respect to phylogeny as well as co-occurrence which was exclusive to the Pockmark area. These patterns point to the influence of neutral dynamics at this locality resulting from the stochastic sampling of early colonizing taxa, the successional stage at sampling and/or the functional redundancy within the investigated genera.
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- 2021
44. Potential impacts of polymetallic nodule removal on deep-sea meiofauna
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Ellen Pape, T.N. Bezerra, Marius Buydens, Hendrik Gheerardyn, Amanda Kieswetter, and Ann Vanreusel
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Nodule (geology) ,HARPACTICOIDA CRUSTACEA ,PROVINCE ,Science ,Meiobenthos ,Biodiversity ,engineering.material ,SEDIMENT ,Deep sea ,Article ,FEEDING ECOLOGY ,Abundance (ecology) ,MARINE NEMATODES ,ASSEMBLAGES ,Trophic level ,Science & Technology ,Multidisciplinary ,Ecology ,SPECIES-DIVERSITY ,Sediment ,Species diversity ,Biology and Life Sciences ,FRAMEWORK ,Multidisciplinary Sciences ,engineering ,PATTERNS ,Science & Technology - Other Topics ,Medicine ,Environmental science ,COMMUNITIES - Abstract
Deep seabed mining is potentially imminent in the Clarion Clipperton Fracture Zone (CCFZ; northeast Pacific). Seabed collectors will remove polymetallic nodules and the surrounding surface sediments, both inhabited by meiofauna, along their path. To determine potential impacts of polymetallic nodule removal, we investigated the importance of nodule presence for the abundance, composition and diversity of sediment meiofauna, and evaluated the existence and composition of nodule crevice meiofauna in the Global Sea Mineral Resources (GSR) exploration contract area. Nodule-free and nodule-rich sediments displayed high biodiversity with many singletons and doubletons, potentially representing rare taxa. Nodule presence negatively influenced sediment meiofaunal abundances but did not markedly affect taxonomic composition or diversity. This is the first report on CCFZ nodule crevice meiofauna, whose abundance related positively to nodule dimensions. Though dominated by the same taxa, nodules and sediments differed regarding the taxonomic and trophic composition of the meio- and nematofauna. Nevertheless, there were no taxa endemic to the nodule crevices and nodule crevice meiofauna added only little to total small-scale (~ cm) meiofaunal abundance and diversity. We formulated environmental management recommendations at the contract area and regional (CCFZ) scale related to sampling effort, set-aside preservation and monitoring areas, and potential rehabilitation measures. ispartof: SCIENTIFIC REPORTS vol:11 issue:1 ispartof: location:England status: published
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- 2021
45. Combining traditional taxonomy and metabarcoding : assemblage structure of nematodes in the shelf sediments of the Eastern Antarctic Peninsula
- Author
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Ann Vanreusel, Lara Macheriotou, Gabriella Pantó, and Francesca Pasotti
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0106 biological sciences ,010504 meteorology & atmospheric sciences ,Science ,Meiobenthos ,Biodiversity ,Ocean Engineering ,QH1-199.5 ,Structural basin ,Aquatic Science ,Oceanography ,010603 evolutionary biology ,01 natural sciences ,Prince Gustav Channel ,ICE-SHELF ,COLONIZATION ,Benthos ,MARINE NEMATODES ,Eastern Antarctic Peninsula ,Transect ,MEIOFAUNA COMMUNITIES ,0105 earth and related environmental sciences ,Water Science and Technology ,biodiversity ,B EMBAYMENTS ,Global and Planetary Change ,PHYTOPLANKTON ASSEMBLAGES ,Community structure ,General. Including nature conservation, geographical distribution ,Sediment ,Biology and Life Sciences ,benthos ,ASVs ,WEDDELL SEA ,LARSEN ,Duse Bay ,nematodes ,metabarcoding ,GLACIER ,PATTERNS ,Bay ,Geology - Abstract
This study provides a snapshot of the largely understudied meiobenthic and nematode communities in the Prince Gustav Channel and Duse Bay. We compared five stations sampled at different water depths along the shelf and investigated their meiobenthic community structure. We approached nematode biodiversity combining traditional taxonomic identification and high throughput sequencing (HTS), with the use of Amplicon Sequence Variants (ASVs). Additionally, we characterized the environment by primary production proxies, grain size and seasonal ice conditions. Our results suggest that the availability of organic matter and its freshness are responsible for the high densities found at all depths. However, potential factors influencing the high local and regional variability of meiofauna density and biodiversity are less clear. A bathymetric transect consisting of three stations in Duse Bay (200 m, 500 m and 1000 m depth) showed increasing pigment concentrations in the first centimeters of the sediment vertical profile with increasing water depth, whereas the meiofauna densities showed the opposite trend. The deepest station of Duse Bay seems to function as a sink for fine material as supported by the higher silt fraction and higher organic matter concentrations. When comparing the two basins in the Prince Gustav Channel (1000 m and 1250 m) and the one in Duse Bay (1000 m), differences in terms of environmental variables, meiofaunal densities and composition were observed. The deepest basin in Prince Gustav Channel is located further South (closer to the highly unstable Larsen area), and marked differences with the other basins suggest that it might be experiencing different conditions as a result of its presence near the summer ice margin and its more elongated topography. Both, the shallowest and the deepest stations showed the highest number of unique sequences, suggesting a more biodiverse nematode assemblage. The morphological identification did not show significant differences in the biodiversity of all stations, differently from the ASVs approach. However the lack of reference sequences in online databases and the thickness of nematode’s cuticule are still important issues to consider as they potentially lead to underestimations of biodiversity and functional traits.
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- 2021
46. Ecological functioning of free-living marine nematodes in coastal wetlands: an overview.
- Author
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Du, Yongfen, Gao, Shu, Warwick, Richard, and Hua, Er
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MARINE ecology , *NEMATODES , *COASTAL wetlands , *MARINE sediments , *CARBON cycle , *VEGETATION & climate , *ENVIRONMENTAL monitoring - Abstract
Nematodes are small multicellular, thread-like organisms, inhabiting almost all conceivable environments; among these, some 25 % are free-living marine forms with a population density of (1-12) × 10 inds m in seabed sediment, reaching maximum values in muddy estuaries and salt marshes. A large quantity of carbon from the salt marsh plants enters the ecosystem via the detritus pathway, in which nematodes play an important role through their feeding and bioturbation activities. Vegetation influences the sedimentary environment and modifies the distribution pattern of nematode communities in coastal wetlands. Nematodes are coupled closely with bacteria/detritus in microbial food webs, stimulating bacterial growth and subsequent nutrient remineralization; they provide food sources for higher trophic levels and serve as a linkage between micro- and macro-fauna. Furthermore, nematodes have a potential to provide proxies that can be used in diagnosing environmental quality. In China, only a limited number of nematode data sets are available for the coastal wetlands across several different climatic zones. It is necessary to carry out additional investigations into the biology and ecology of nematodes in order to delineate their ecological functioning in coastal wetlands. On such a basis, the contribution made by nematodes to material cycling and the ecological functioning in coastal wetlands can be quantified. The assessment of their biological diversity should be a focus, which is fundamental in the study of wetland ecosystem dynamic mechanisms. In addition to laboratory and mesocosm experiments, mathematical models should be established to predict the responses of ecosystem to the environmental disturbance. Finally, it is necessary to improve the techniques for nematode analysis, to enhance the efficiency of data acquisition. [ABSTRACT FROM AUTHOR]
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- 2014
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47. Phylogenetic confirmation of the genus Robbea (Nematoda: Desmodoridae, Stilbonematinae) with the description of three new species.
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Ott, Jörg A., Gruber-Vodicka, Harald R., Leisch, Nikolaus, and Zimmermann, Judith
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DESMODORIDA , *PHYLOGENY , *RIBOSOMAL RNA , *NEMATODES , *SCANNING electron microscopes - Abstract
The Stilbonematinae are a monophyletic group of marine nematodes that are characterized by a coat of thiotrophic bacterial symbionts. Among the ten known genera of the Stilbonematinae, the genusRobbeaGerlach1956 had a problematic taxonomic history of synonymizations and indications of polyphyletic origin. Here we describe three new species of the genus,R. hypermnestrasp. nov.,R. ruetzlerisp. nov. andR. agricolasp. nov., using conventional light microscopy, interference contrast microscopy and SEM. We provide 18S rRNA gene sequences of all three species, together with new sequences for the generaCatanemaandLeptonemella. Both our morphological analyses as well as our phylogenetic reconstructions corroborate the genusRobbea. In our phylogenetic analysis the three species of the genusRobbeaform a distinct clade in the Stilbonematinae radiation and are clearly separated from the clade of the genusCatanema, which has previously been synonymized withRobbea. Surprisingly, inR. hypermnestrasp. nov. all females are intersexes exhibiting male sexual characters. Our extended dataset of Stilbonematinae 18S rRNA genes for the first time allows the identification of the different genera, e.g. in a barcoding approach. http://zoobank.org/urn:lsid:zoobank.org:pub:D37C3F5A-CF2B-40E6-8B09-3C72EEED60B0 [ABSTRACT FROM PUBLISHER]
- Published
- 2014
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48. THE INFLUENCE OF TIDAL AND RAINFALL CYCLES ON INTERTIDAL NEMATODES: A CASE STUDY IN A TROPICAL SANDY BEACH.
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Venekey, Virag, Santos, Paulo Jorge Parreira dos, and Fonsêca-Genevois, Verônica Gomes da
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NEMATODES ,MARINE worms ,RAINFALL ,MARINE invertebrates - Abstract
Copyright of Brazilian Journal of Oceanography is the property of Instituto Oceanografico da Universidade de Sao Paulo and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2014
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49. The state of the art of Xyalidae (Nematoda, Monhysterida) with reference to the Brazilian records.
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Venekey, Virág, Gheller, Paula, Maria, Tatiana, Brustolin, Marco, Kandratavicius, Noelia, Vieira, Danilo, Brito, Simone, Souza, Guilherme, and Fonseca, Gustavo
- Abstract
In the current study we provide a reviewed list of valid genera and species of Xyalidae, a widespread family of mostly marine free-living nematodes. Comments are added about the historic background and taxonomic situation of the family, all valid genera and, when necessary, diagnostic characters are given. Additionally, information about distribution and geographical location of species recorded along the Brazilian coast is provided. Our review recognized 46 valid genera, 450 valid species and 73 descriptions without enough morphological information for identification ( species inquerendae). Nearly 80 % of the species inquerendae belong to Daptonema and Theristus. To avoid homonymies, two Daptonema species were renamed, Daptonema biwaensis (Tsalolikhin, 2002) new name (former Mongolotheristus timoshkini) and Daptonema vietnamensis (Gagarin and Thu, 2008) new name (former D. curvatum sensu Gagarin and Thu, 2008). Cenolaimus sapeloensis is transferred to Xyala sapeloensis comb. nov. Along the Brazilian coast 28 genera and 41 species have been recorded. The species Elzalia floresi, Metadesmolaimus tersus, Paramonohystera stricta, Pseudosteineria scopae, Rhynchonema cemae, R. veronicae, Steineria ericia, S. marcorum, S. pavo, S. tripartita, Theristus acribus, T. flevensis, T. macroflevensis, T. pertenuis, T. stranus, Trichotheristus heterus, T. setosus and Zygonemella striata have the Brazilian coast as the type locality. Among all species, three occurred across three geographic regions, while the large majority was restricted to one. Xyalidae is typically encountered in oceanic sandy beaches, with only the species belonging to Daptonema, Theristus, Trichotheristus and Zygonemella being recorded in estuarine sediments. This observation suggests that the colonization of inland waters occurred multiple times along the evolutionary history. [ABSTRACT FROM AUTHOR]
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- 2014
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50. Effect of short-term hypoxia on marine nematode community structure and vertical distribution pattern in three different sediment types of the North Sea.
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Taheri, Mehrshad, Braeckman, Ulrike, Vincx, Magda, and Vanaverbeke, Jan
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- *
HYPOXEMIA , *NEMATODE populations , *MARINE invertebrates , *VERTICAL distribution (Aquatic biology) , *VETERINARY dentistry , *SEDIMENTATION & deposition - Abstract
The responses of nematode communities to short-term hypoxia (1 and 7 days) were investigated in three North Sea stations with different sediment types (coarse silt, fine sand and medium sand). In the field, nematode density, diversity, vertical distribution and community structure differ among the stations. In the laboratory, oxic and hypoxic treatments were established for 1 and 7 days for all sediment types. Comparison between field control and oxic day 1 treatments showed that experimental sediment handling did not affect nematode characteristics. Our results revealed that short-term hypoxia did not affect total density, diversity, community composition, vertical density profiles (except in the fine sand) and densities of five dominant species in all sediment types. [ABSTRACT FROM AUTHOR]
- Published
- 2014
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- View/download PDF
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