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We explore the phenomenon commonly known as halo assembly bias, whereby dark matter halos of the same mass are found to be more or less clustered when a second halo property is considered, for halos in the mass range $3.7 \times 10^{11} \; h^{-1} \mathrm{M_{\odot}} - 5.0 \times 10^{13} \; h^{-1} \mathrm{M_{\odot}}$. Using the Large Suite of Dark Matter Simulations (LasDamas) we consider nine commonly used halo properties and find that a clustering bias exists if halos are binned by mass or by any other halo property. This secondary bias implies that no single halo property encompasses all the spatial clustering information of the halo population. The mean values of some halo properties depend on their halo's distance to a more massive neighbor. Halo samples selected by having high values of one of these properties therefore inherit a neighbor bias such that they are much more likely to be close to a much more massive neighbor. This neighbor bias largely accounts for the secondary bias seen in halos binned by mass and split by concentration or age. However, halos binned by other mass-like properties still show a secondary bias even when the neighbor bias is removed. The secondary bias of halos selected by their spin behaves differently than that for other halo properties, suggesting that the origin of the spin bias is different than of other secondary biases., Comment: 14 pages, LaTeX; minor revisions, and added references; results unchanged

Interpreting the small-scale clustering of galaxies with halo models can elucidate the connection between galaxies and dark matter halos. Unfortunately, the modelling is typically not sufficiently accurate for ruling out models statistically. It is thus difficult to use the information encoded in small scales to test cosmological models or probe subtle features of the galaxy-halo connection. In this paper, we attempt to push halo modelling into the "accurate" regime with a fully numerical mock-based methodology and careful treatment of statistical and systematic errors. With our forward-modelling approach, we can incorporate clustering statistics beyond the traditional two-point statistics. We use this modelling methodology to test the standard $\Lambda\mathrm{CDM}$ + halo model against the clustering of SDSS DR7 galaxies. Specifically, we use the projected correlation function, group multiplicity function and galaxy number density as constraints. We find that while the model fits each statistic separately, it struggles to fit them simultaneously. Adding group statistics leads to a more stringent test of the model and significantly tighter constraints on model parameters. We explore the impact of varying the adopted halo definition and cosmological model and find that changing the cosmology makes a significant difference. The most successful model we tried (Planck cosmology with Mvir halos) matches the clustering of low luminosity galaxies, but exhibits a 2.3$\sigma$ tension with the clustering of luminous galaxies, thus providing evidence that the "standard" halo model needs to be extended. This work opens the door to adding interesting freedom to the halo model and including additional clustering statistics as constraints., Comment: Replaced to match the published version

We describe the Sloan Digital Sky Survey IV (SDSS-IV), a project encompassing three major spectroscopic programs. The Apache Point Observatory Galactic Evolution Experiment 2 (APOGEE-2) is observing hundreds of thousands of Milky Way stars at high resolution and high signal-to-noise ratio in the near-infrared. The Mapping Nearby Galaxies at Apache Point Observatory (MaNGA) survey is obtaining spatially-resolved spectroscopy for thousands of nearby galaxies (median redshift of z = 0.03). The extended Baryon Oscillation Spectroscopic Survey (eBOSS) is mapping the galaxy, quasar, and neutral gas distributions between redshifts z = 0.6 and 3.5 to constrain cosmology using baryon acoustic oscillations, redshift space distortions, and the shape of the power spectrum. Within eBOSS, we are conducting two major subprograms: the SPectroscopic IDentification of eROSITA Sources (SPIDERS), investigating X-ray AGN and galaxies in X-ray clusters, and the Time Domain Spectroscopic Survey (TDSS), obtaining spectra of variable sources. All programs use the 2.5-meter Sloan Foundation Telescope at Apache Point Observatory; observations there began in Summer 2014. APOGEE-2 also operates a second near-infrared spectrograph at the 2.5-meter du Pont Telescope at Las Campanas Observatory, with observations beginning in early 2017. Observations at both facilities are scheduled to continue through 2020. In keeping with previous SDSS policy, SDSS-IV provides regularly scheduled public data releases; the first one, Data Release 13, was made available in July 2016., Comment: Published in Astronomical Journal

We present cosmological results from the final galaxy clustering data set of the Baryon Oscillation Spectroscopic Survey, part of the Sloan Digital Sky Survey III. Our combined galaxy sample comprises 1.2 million massive galaxies over an effective area of 9329 deg^2 and volume of 18.7 Gpc^3, divided into three partially overlapping redshift slices centred at effective redshifts 0.38, 0.51, and 0.61. We measure the angular diameter distance DM and Hubble parameter H from the baryon acoustic oscillation (BAO) method after applying reconstruction to reduce non-linear effects on the BAO feature. Using the anisotropic clustering of the pre-reconstruction density field, we measure the product DM*H from the Alcock-Paczynski (AP) effect and the growth of structure, quantified by f{\sigma}8(z), from redshift-space distortions (RSD). We combine measurements presented in seven companion papers into a set of consensus values and likelihoods, obtaining constraints that are tighter and more robust than those from any one method. Combined with Planck 2015 cosmic microwave background measurements, our distance scale measurements simultaneously imply curvature {\Omega}_K =0.0003+/-0.0026 and a dark energy equation of state parameter w = -1.01+/-0.06, in strong affirmation of the spatially flat cold dark matter model with a cosmological constant ({\Lambda}CDM). Our RSD measurements of f{\sigma}_8, at 6 per cent precision, are similarly consistent with this model. When combined with supernova Ia data, we find H0 = 67.3+/-1.0 km/s/Mpc even for our most general dark energy model, in tension with some direct measurements. Adding extra relativistic species as a degree of freedom loosens the constraint only slightly, to H0 = 67.8+/-1.2 km/s/Mpc. Assuming flat {\Lambda}CDM we find {\Omega}_m = 0.310+/-0.005 and H0 = 67.6+/-0.5 km/s/Mpc, and we find a 95% upper limit of 0.16 eV/c^2 on the neutrino mass sum., Comment: 38 pages, 20 figures, 12 tables. Submitted to MNRAS. Clustering data and likelihoods are made available at https://sdss3.org/science/boss_publications.php

We apply the Alcock-Paczynski (AP) test to the stacked voids identified using the large-scale structure galaxy catalog from the Baryon Oscillation Spectroscopic Survey (BOSS). This galaxy catalog is part of the Sloan Digital Sky Survey (SDSS) Data Release 12 and is the final catalog of SDSS-III. We also use 1000 mock galaxy catalogs that match the geometry, density, and clustering properties of the BOSS sample in order to characterize the statistical uncertainties of our measurements and take into account systematic errors such as redshift space distortions. For both BOSS data and mock catalogs, we use the ZOBOV algorithm to identify voids, we stack together all voids with effective radii of 30-100Mpc/h in the redshift range 0.43-0.7, and we accurately measure the shape of the stacked voids. Our tests with the mock catalogs show that we measure the stacked void ellipticity with a statistical precision of 2.6%. We find that the stacked voids in redshift space are slightly squashed along the line of sight, which is consistent with previous studies. We repeat this measurement of stacked void shape in the BOSS data assuming several values of Omega_m within the flat LCDM model, and we compare to the mock catalogs in redshift space in order to perform the AP test. We obtain a constraint of $\Omega_m = 0.38^{+0.18}_{-0.15}$ at the 68% confidence level from the AP test. We discuss the various sources of statistical and systematic noise that affect the constraining power of this method. In particular, we find that the measured ellipticity of stacked voids scales more weakly with cosmology than the standard AP prediction, leading to significantly weaker constraints. We discuss how AP constraints will improve in future surveys with larger volumes and densities., Comment: 10 pages, 7 figures. Submitted to the ApJ. Replaced with updated version

We present a cosmic void catalog using the large-scale structure galaxy catalog from the Baryon Oscillation Spectroscopic Survey (BOSS). This galaxy catalog is part of the Sloan Digital Sky Survey (SDSS) Data Release 12 and is the final catalog of SDSS-III. We take into account the survey boundaries, masks, and angular and radial selection functions, and apply the ZOBOV void finding algorithm to the galaxy catalog. We identify a total of 10,643 voids. After making quality cuts to ensure that the voids represent real underdense regions, we obtain 1,228 voids with effective radii spanning the range 20-100Mpc/h and with central densities that are, on average, 30% of the mean sample density. We release versions of the catalogs both with and without quality cuts. We discuss the basic statistics of voids, such as their size and redshift distributions, and measure the radial density profile of the voids via a stacking technique. In addition, we construct mock void catalogs from 1000 mock galaxy catalogs, and find that the properties of BOSS voids are in good agreement with those in the mock catalogs. We compare the stellar mass distribution of galaxies living inside and outside of the voids, and find no significant difference. These BOSS and mock void catalogs are useful for a number of cosmological and galaxy environment studies., Comment: 7 pages, 7 figures, submitted to the ApJ

We report a measurement of the large-scale 3-point correlation function of galaxies using the largest dataset for this purpose to date, 777, 202 Luminous Red Galaxies in the Sloan Digital Sky Survey Baryon Acoustic Oscillation Spectroscopic Survey (SDSS BOSS) DR12 CMASS sample. This work exploits the novel algorithm of Slepian & Eisenstein (2015b) to compute the multipole moments of the 3PCF in $\mathcal{O}(N^2)$ time, with $N$ the number of galaxies. Leading-order perturbation theory models the data well in a compressed basis where one triangle side is integrated out. We also present an accurate and computationally efficient means of estimating the covariance matrix. With these techniques the redshift-space linear and non-linear bias are measured, with 2.6% precision on the former if $\sigma_8$ is fixed. The data also indicates a $2.8\sigma$ preference for the BAO, confirming the presence of BAO in the 3-point function., Comment: 16 pages, 10 figures, submitted MNRAS

We present a science forecast for the eBOSS survey, part of the SDSS-IV project, which is a spectroscopic survey using multiple tracers of large-scale structure, including luminous red galaxies (LRGs), emission line galaxies (ELGs) and quasars (both as a direct probe of structure and through the Ly-$\alpha$ forest). Focusing on discrete tracers, we forecast the expected accuracy of the baryonic acoustic oscillation (BAO), the redshift-space distortion (RSD) measurements, the $f_{\rm NL}$ parameter quantifying the primordial non-Gaussianity, the dark energy and modified gravity parameters. We also use the line-of-sight clustering in the Ly-$\alpha$ forest to constrain the total neutrino mass. We find that eBOSS LRGs ($0.60.6$), ELGs ($0.6

The Baryon Oscillation Spectroscopic Survey (BOSS), part of the Sloan Digital Sky Survey (SDSS) III project, has provided the largest survey of galaxy redshifts available to date, in terms of both the number of galaxy redshifts measured by a single survey, and the effective cosmological volume covered. Key to analysing the clustering of these data to provide cosmological measurements is understanding the detailed properties of this sample. Potential issues include variations in the target catalogue caused by changes either in the targeting algorithm or properties of the data used, the pattern of spectroscopic observations, the spatial distribution of targets for which redshifts were not obtained, and variations in the target sky density due to observational systematics. We document here the target selection algorithms used to create the galaxy samples that comprise BOSS. We also present the algorithms used to create large scale structure catalogues for the final Data Release (DR12) samples and the associated random catalogues that quantify the survey mask. The algorithms are an evolution of those used by the BOSS team to construct catalogues from earlier data, and have been designed to accurately quantify the galaxy sample. The code used, designated MKSAMPLE, is released with this paper., Comment: 21 pages, 12 figures, version accepted for publication in MNRAS

We present a study of the clustering and halo occupation distribution of BOSS CMASS galaxies in the redshift range 0.43 < z < 0.7 drawn from the Final SDSS-III Data Release. We compare the BOSS results with the predictions of a Halo Abundance Matching (HAM) clustering model that assigns galaxies to dark matter halos selected from the large BigMultiDark $N$-body simulation of a flat $\Lambda$CDM Planck cosmology. We compare the observational data with the simulated ones on a light-cone constructed from 20 subsequent outputs of the simulation. Observational effects such as incompleteness, geometry, veto masks and fiber collisions are included in the model, which reproduces within 1-$\sigma$ errors the observed monopole of the 2-point correlation function at all relevant scales: from the smallest scales, 0.5 $h^{-1}$ Mpc, up to scales beyond the Baryonic Acoustic Oscillation feature. This model also agrees remarkably well with the BOSS galaxy power spectrum (up to $k\sim1$ $h$ Mpc$^{-1}$), and the Three-point correlation function. The quadrupole of the correlation function presents some tensions with observations. We discuss possible causes that can explain this disagreement, including target selection effects. Overall, the standard HAM model describes remarkably well the clustering statistics of the CMASS sample. We compare the stellar to halo mass relation for the CMASS sample measured using weak lensing in the CFHT Stripe 82 Survey with the prediction of our clustering model, and find a good agreement within 1-$\sigma$. The BigMD-BOSS light-cone including properties of BOSS galaxies and halo properties is made publicly available., Comment: 16 pages, 16 figures. See companion papers that share the "The clustering of galaxies in the SDSS-III Baryon Oscillation Spectroscopic Survey:" title

We present distance scale measurements from the baryon acoustic oscillation signal in the CMASS and LOWZ samples from the Data Release 12 of the Baryon Oscillation Spectroscopic Survey (BOSS). The total volume probed is 14.5 Gpc$^3$, a 10 per cent increment from Data Release 11. From an analysis of the spherically averaged correlation function, we infer a distance to $z=0.57$ of $D_V(z)r^{\rm fid}_{\rm d}/r_ {\rm d}=2028\pm21$ Mpc and a distance to $z=0.32$ of $D_V(z)r^{\rm fid}_{\rm d}/r_{\rm d}=1264\pm22$ Mpc assuming a cosmology in which $r^{\rm fid}_{\rm d}=147.10$ Mpc. From the anisotropic analysis, we find an angular diameter distance to $z=0.57$ of $D_{\rm A}(z)r^{\rm fid}_{\rm d}/r_{\rm d}=1401\pm21$ Mpc and a distance to $z=0.32$ of $981\pm20$ Mpc, a 1.5 per cent and 2.0 per cent measurement respectively. The Hubble parameter at $z=0.57$ is $H(z)r_{\rm d}/r^{\rm fid}_{\rm d}=100.3\pm3.7$ km s$^{-1}$ Mpc$^{-1}$ and its value at $z=0.32$ is $79.2\pm5.6$ km s$^{-1}$ Mpc$^{-1}$, a 3.7 per cent and 7.1 per cent measurement respectively. These cosmic distance scale constraints are in excellent agreement with a $\Lambda$CDM model with cosmological parameters released by the recent Planck 2015 results., Comment: 18 pages, 10 figures, 13 tables. Matches version accepted for publication in MNRAS. Here we account for a systematic error budget not included in the previous version of this manuscript

We describe the algorithm used to select the Luminous Red Galaxy (LRG) sample for the extended Baryon Oscillation Spectroscopic Survey (eBOSS) of the Sloan Digital Sky Survey IV (SDSS-IV) using photometric data from both the SDSS and the Wide-Field Infrared Survey Explorer (WISE). LRG targets are required to meet a set of color selection criteria and have z-band and i-band MODEL magnitudes z < 19.95 and 19.9 < i < 21.8, respectively. Our algorithm selects roughly 50 LRG targets per square degree, the great majority of which lie in the redshift range 0.6 < z < 1.0 (median redshift 0.71). We demonstrate that our methods are highly effective at eliminating stellar contamination and lower-redshift galaxies. We perform a number of tests using spectroscopic data from SDSS-III/BOSS to determine the redshift reliability of our target selection and its ability to meet the science requirements of eBOSS. The SDSS spectra are of high enough signal-to-noise ratio that at least 89% of the target sample yields secure redshift measurements. We also present tests of the uniformity and homogeneity of the sample, demonstrating that it should be clean enough for studies of the large-scale structure of the universe at higher redshifts than SDSS-III/BOSS LRGs reached., Comment: Submitted in ApJS, 15 pages, 10 figures

As part of the Sloan Digital Sky Survey IV the extended Baryon Oscillation Spectroscopic Survey (eBOSS) will improve measurements of the cosmological distance scale by applying the Baryon Acoustic Oscillation (BAO) method to quasar samples. eBOSS will adopt two approaches to target quasars over 7500 sq. deg. First, a "CORE" quasar sample will combine optical selection in ugriz using a likelihood-based routine called XDQSOz, with a mid-IR-optical color-cut. eBOSS CORE selection (to g < 22 OR r < 22) should return ~ 70 quasars per sq. deg. at redshifts 0.9 < z < 2.2 and ~7 z > 2.1 quasars per sq. deg. Second, a selection based on variability in multi-epoch imaging from the Palomar Transient Factory should recover an additional ~3-4 z > 2.1 quasars per sq. deg. to g < 22.5. A linear model of how imaging systematics affect target density recovers the angular distribution of eBOSS CORE quasars over 96.7% (76.7%) of the SDSS North (South) Galactic Cap area. The eBOSS CORE quasar sample should thus be sufficiently dense and homogeneous over 0.9 < z < 2.2 to yield the first few-percent-level BAO constraint near z~1.5. eBOSS quasars at z > 2.1 will be used to improve BAO measurements in the Lyman-alpha Forest. Beyond its key cosmological goals, eBOSS should be the next-generation quasar survey, comprising > 500,000 new quasars and > 500,000 uniformly selected spectroscopically confirmed 0.9 < z < 2.2 quasars. At the conclusion of eBOSS, the SDSS will have provided unique spectra of over 800,000 quasars., Comment: 25 pages, 21 figures, 6 tables, Accepted to ApJS after minor revisions and replaced with accepted version. Results unchanged

The Extended Baryon Oscillation Spectroscopic Survey (eBOSS) will conduct novel cosmological observations using the BOSS spectrograph at Apache Point Observatory. Observations will be simultaneous with the Time Domain Spectroscopic Survey (TDSS) designed for variability studies and the Spectroscopic Identification of eROSITA Sources (SPIDERS) program designed for studies of X-ray sources. eBOSS will use four different tracers to measure the distance-redshift relation with baryon acoustic oscillations (BAO). Using more than 250,000 new, spectroscopically confirmed luminous red galaxies at a median redshift z=0.72, we project that eBOSS will yield measurements of $d_A(z)$ to an accuracy of 1.2% and measurements of H(z) to 2.1% when combined with the z>0.6 sample of BOSS galaxies. With ~195,000 new emission line galaxy redshifts, we expect BAO measurements of $d_A(z)$ to an accuracy of 3.1% and H(z) to 4.7% at an effective redshift of z= 0.87. A sample of more than 500,000 spectroscopically-confirmed quasars will provide the first BAO distance measurements over the redshift range 0.92.1; these new data will enhance the precision of $d_A(z)$ and H(z) by a factor of 1.44 relative to BOSS. Furthermore, eBOSS will provide improved tests of General Relativity on cosmological scales through redshift-space distortion measurements, improved tests for non-Gaussianity in the primordial density field, and new constraints on the summed mass of all neutrino species. Here, we provide an overview of the cosmological goals, spectroscopic target sample, demonstration of spectral quality from early data, and projected cosmological constraints from eBOSS., Comment: 39 pages, 13 figures, accepted AJ, revised for consistency with accepted version

Current and future large redshift surveys, as the Sloan Digital Sky Survey IV extended Baryon Oscillation Spectroscopic Survey (SDSS-IV/eBOSS) or the Dark Energy Spectroscopic Instrument (DESI), will use emission-line galaxies (ELG) to probe cosmological models by mapping the large-scale structure of the Universe in the redshift range $0.6 < z < 1.7$. With current data, we explore the halo-galaxy connection by measuring three clustering properties of $g$-selected ELGs as matter tracers in the redshift range $0.6 < z < 1$: (i) the redshift-space two-point correlation function using spectroscopic redshifts from the BOSS ELG sample and VIPERS; (ii) the angular two-point correlation function on the footprint of the CFHT-LS; (iii) the galaxy-galaxy lensing signal around the ELGs using the CFHTLenS. We interpret these observations by mapping them onto the latest high-resolution MultiDark Planck N-body simulation, using a novel (Sub)Halo-Abundance Matching technique that accounts for the ELG incompleteness. ELGs at $z\sim0.8$ live in halos of $(1\pm 0.5)\times10^{12}\,h^{-1}$M$_{\odot}$ and 22.5$\pm2.5$% of them are satellites belonging to a larger halo. The halo occupation distribution of ELGs indicates that we are sampling the galaxies in which stars form in the most efficient way, according to their stellar-to-halo mass ratio., Comment: 11 pages, 7 figures, 2 tables

We explore the bluer star-forming population of the Sloan Digital Sky Survey (SDSS) III/BOSS CMASS DR11 galaxies at $z>0.55$ to quantify their differences, in terms of redshift-space distortions and large-scale bias, with respect to the luminous red galaxy sample. We perform a qualitative analysis to understand the significance of these differences and whether we can model and reproduce them in mock catalogs. Specifically, we measure galaxy clustering in CMASS on small and intermediate scales ($r\lesssim 50\,h^{-1}$Mpc) by computing the two-point correlation function $-$ both projected and redshift-space $-$ of these galaxies, and a new statistic, $\Sigma(\pi)$, able to provide robust information about redshift-space distortions and large-scale bias. We interpret our clustering measurements by adopting a Halo Occupation Distribution (HOD) scheme that maps them onto high-resolution N-body cosmological simulations to produce suitable mock galaxy catalogs. The traditional HOD prescription can be applied to the red and the blue samples, independently, but this approach is unphysical since it allows the same mock galaxies to be either red or blue. To overcome this failure, we modify the standard formulation and infer the red and the blue mock catalogs directly from the full one, so that they are complementary and non-overlapping. This separation is performed by matching the observed CMASS red and blue galaxy fractions and produces reliable and accurate models., Comment: 20 pages, 20 figures

We study how optical galaxy morphology depends on mass and star formation rate (SFR) in the Illustris Simulation. To do so, we measure automated galaxy structures in 10808 simulated galaxies at z=0 with stellar masses 10^9.7 < M_*/M_sun < 10^12.3. We add observational realism to idealized synthetic images and measure non-parametric statistics in rest-frame optical and near-IR images from four directions. We find that Illustris creates a morphologically diverse galaxy population, occupying the observed bulge strength locus and reproducing median morphology trends versus stellar mass, SFR, and compactness. Morphology correlates realistically with rotation, following classification schemes put forth by kinematic surveys. Type fractions as a function of environment agree roughly with data. These results imply that connections among mass, star formation, and galaxy structure arise naturally from models matching global star formation and halo occupation functions when simulated with accurate methods. This raises a question of how to construct experiments on galaxy surveys to better distinguish between models. We predict that at fixed halo mass near 10^12 M_sun, disc-dominated galaxies have higher stellar mass than bulge-dominated ones, a possible consequence of the Illustris feedback model. While Illustris galaxies at M_* ~ 10^11 M_sun have a reasonable size distribution, those at M_* ~ 10^10 M_sun have half-light radii larger than observed by a factor of two. Furthermore, at M_* ~ 10^10.5-10^11 M_sun, a relevant fraction of Illustris galaxies have distinct "ring-like" features, such that the bright pixels have an unusually wide spatial extent., Comment: 26 pages, 15 figures, MNRAS accepted version

The third generation of the Sloan Digital Sky Survey (SDSS-III) took data from 2008 to 2014 using the original SDSS wide-field imager, the original and an upgraded multi-object fiber-fed optical spectrograph, a new near-infrared high-resolution spectrograph, and a novel optical interferometer. All the data from SDSS-III are now made public. In particular, this paper describes Data Release 11 (DR11) including all data acquired through 2013 July, and Data Release 12 (DR12) adding data acquired through 2014 July (including all data included in previous data releases), marking the end of SDSS-III observing. Relative to our previous public release (DR10), DR12 adds one million new spectra of galaxies and quasars from the Baryon Oscillation Spectroscopic Survey (BOSS) over an additional 3000 sq. deg of sky, more than triples the number of H-band spectra of stars as part of the Apache Point Observatory (APO) Galactic Evolution Experiment (APOGEE), and includes repeated accurate radial velocity measurements of 5500 stars from the Multi-Object APO Radial Velocity Exoplanet Large-area Survey (MARVELS). The APOGEE outputs now include measured abundances of 15 different elements for each star. In total, SDSS-III added 2350 sq. deg of ugriz imaging; 155,520 spectra of 138,099 stars as part of the Sloan Exploration of Galactic Understanding and Evolution 2 (SEGUE-2) survey; 2,497,484 BOSS spectra of 1,372,737 galaxies, 294,512 quasars, and 247,216 stars over 9376 sq. deg; 618,080 APOGEE spectra of 156,593 stars; and 197,040 MARVELS spectra of 5,513 stars. Since its first light in 1998, SDSS has imaged over 1/3 of the Celestial sphere in five bands and obtained over five million astronomical spectra., Comment: DR12 data are available at http://www.sdss3.org/dr12. 30 pages. 11 figures. Accepted to ApJS

We present our methods for generating a catalog of 7,000 synthetic images and 40,000 integrated spectra of redshift z = 0 galaxies from the Illustris Simulation. The mock data products are produced by using stellar population synthesis models to assign spectral energy distributions (SED) to each star particle in the galaxies. The resulting synthetic images and integrated SEDs therefore properly reflect the spatial distribution, stellar metallicity distribution, and star formation history of the galaxies. From the synthetic data products it is possible to produce monochromatic or color-composite images, perform SED fitting, classify morphology, determine galaxy structural properties, and evaluate the impacts of galaxy viewing angle. The main contribution of this paper is to describe the production, format, and composition of the image catalog that makes up the Illustris Simulation Obsevatory. As a demonstration of this resource, we derive galactic stellar mass estimates by applying the SED fitting code FAST to the synthetic galaxy products, and compare the derived stellar masses against the true stellar masses from the simulation. We find from this idealized experiment that systematic biases exist in the photometrically derived stellar mass values that can be reduced by using a fixed metallicity in conjunction with a minimum galaxy age restriction., Comment: 21 pages, 17 figures, submitted to MNRAS. Comments welcome

We derive constraints on cosmological parameters and tests of dark energy models from the combination of baryon acoustic oscillation (BAO) measurements with cosmic microwave background (CMB) and Type Ia supernova (SN) data. We take advantage of high-precision BAO measurements from galaxy clustering and the Ly-alpha forest (LyaF) in the BOSS survey of SDSS-III. BAO data alone yield a high confidence detection of dark energy, and in combination with the CMB angular acoustic scale they further imply a nearly flat universe. Combining BAO and SN data into an "inverse distance ladder" yields a 1.7% measurement of $H_0=67.3 \pm1.1$ km/s/Mpc. This measurement assumes standard pre-recombination physics but is insensitive to assumptions about dark energy or space curvature, so agreement with CMB-based estimates that assume a flat LCDM cosmology is an important corroboration of this minimal cosmological model. For open LCDM, our BAO+SN+CMB combination yields $\Omega_m=0.301 \pm 0.008$ and curvature $\Omega_k=-0.003 \pm 0.003$. When we allow more general forms of evolving dark energy, the BAO+SN+CMB parameter constraints remain consistent with flat LCDM. While the overall $\chi^2$ of model fits is satisfactory, the LyaF BAO measurements are in moderate (2-2.5 sigma) tension with model predictions. Models with early dark energy that tracks the dominant energy component at high redshifts remain consistent with our constraints. Expansion history alone yields an upper limit of 0.56 eV on the summed mass of neutrino species, improving to 0.26 eV if we include Planck CMB lensing. Standard dark energy models constrained by our data predict a level of matter clustering that is high compared to most, but not all, observational estimates. (Abridged), Comment: 38 pages, 20 figures, BOSS collaboration paper; v2: fixed inconsistent definitions of DH, added references; v3: version accepted by PRD, corrected error resulting in significantly weaker constraints on decaying dark matter model

We have developed an analytical method based on forward-modeling techniques to characterize the high-mass end of the red sequence (RS) galaxy population at redshift $z\sim0.55$, from the DR10 BOSS CMASS spectroscopic sample, which comprises $\sim600,000$ galaxies. The method, which follows an unbinned maximum likelihood approach, allows the deconvolution of the intrinsic CMASS colour-colour-magnitude distributions from photometric errors and selection effects. This procedure requires modeling the covariance matrix for the i-band magnitude, g-r colour and r-i colour using Stripe 82 multi-epoch data. Our results indicate that the error-deconvolved intrinsic RS distribution is consistent, within the photometric uncertainties, with a single point ($<0.05~{\rm{mag}}$) in the colour-colour plane at fixed magnitude, for a narrow redshift slice. We have computed the high-mass end ($^{0.55}M_i \lesssim -22$) of the $^{0.55}i$-band RS Luminosity Function (RS LF) in several redshift slices within the redshift range $0.52

We present the measurements of the redshift-space three-point correlation function (3PCF) for z~0.5 luminous red galaxies of the CMASS sample in the Sloan Digital Sky Survey-III Baryon Oscillation Spectroscopic Survey Data Release 11. The 3PCF measurements are interpreted within the halo occupation distribution framework using high-resolution N-body simulations, and the model successfully reproduces the 3PCF on scales larger than 1Mpc/h. As with the case for the redshift-space two-point correlation functions, we find that the redshift-space 3PCF measurements also favour the inclusion of galaxy velocity bias in the model. In particular, the central galaxy in a halo is on average in motion with respect to the core of the halo. We discuss the potential of the small-scale 3PCF to tighten the constraints on the relation between galaxies and dark matter haloes and on the phase-space distribution of galaxies., Comment: MNRAS Letter accepted

Observations of redshift-space distortions in spectroscopic galaxy surveys offer an attractive method for observing the build-up of cosmological structure, which depends both on the expansion rate of the Universe and our theory of gravity. In preparation for analysis of redshift-space distortions from the Baryon Oscillation Spectroscopic Survey (BOSS) final data release we compare a number of analytic and phenomenological `streaming' models, specified in configuration space, to mock catalogs derived in different ways from several N-body simulations. The galaxies in each mock catalog have properties similar to those of the higher redshift galaxies measured by BOSS but differ in the details of how small-scale velocities and halo occupancy are determined. We find that all of the analytic models fit the simulations over a limited range of scales while failing at small scales. We discuss which models are most robust and on which scales they return reliable estimates of the rate of growth of structure: we find that models based on some form of resummation can fit our N-body data for BOSS-like galaxies above $30\,h^{-1}$Mpc well enough to return unbiased parameter estimates., Comment: 12 pages, 11 figures, matches version accepted by MNRAS

We measure the angular clustering of galaxies from the Sloan Digital Sky Survey Data Release 7 in order to probe the spatial distribution of satellite galaxies within their dark matter halos. Specifically, we measure the angular correlation function on very small scales (7-320") in a range of luminosity threshold samples (absolute r-band magnitudes of -18 up to -21) that are constructed from the subset of SDSS that has been spectroscopically observed more than once (the so-called plate overlap region). We choose to measure angular clustering in this reduced survey footprint in order to minimize the effects of fiber collision incompleteness, which are otherwise substantial on these small scales. We model our clustering measurements using a fully numerical halo model that populates dark matter halos in N-body simulations to create realistic mock galaxy catalogs. The model has free parameters that specify both the number and spatial distribution of galaxies within their host halos. We adopt a flexible density profile for the spatial distribution of satellite galaxies that is similar to the dark matter Navarro-Frenk-White (NFW) profile, except that the inner slope is allowed to vary. We find that the angular clustering of our most luminous samples (Mr< -20 and -21) suggests that luminous satellite galaxies have substantially steeper inner density profiles than NFW. Lower luminosity samples are less constraining, however, and are consistent with satellite galaxies having shallow density profiles. Our results confirm the findings of Watson et al. 2012 while using different clustering measurements and modeling methodology., Comment: 13 pages, 8 figures. Published in the Astrophysical Journal

We use cosmological N-body simulations to investigate whether measurements of the moments of large-scale structure can yield constraints on primordial non-Gaussianity. We measure the variance, skewness, and kurtosis of the evolved density field from simulations with Gaussian and three different non-Gaussian initial conditions: a local model with f_NL=100, an equilateral model with f_NL=-400, and an orthogonal model with f_NL=-400. We show that the moments of the dark matter density field differ significantly between Gaussian and non-Gaussian models. We also make the measurements on mock galaxy catalogs that contain galaxies with clustering properties similar to those of luminous red galaxies (LRGs). We find that, in the case of skewness and kurtosis, galaxy bias reduces the detectability of non-Gaussianity, though we can still clearly discriminate between different models in our simulation volume. However, in the case of the variance, galaxy bias greatly amplifies the detectability of non-Gaussianity. In all cases we find that redshift distortions do not significantly affect the detectability. When we restrict our measurements to volumes equivalent to the Sloan Digital Sky Survey II (SDSS-II) or Baryon Oscillation Spectroscopic Survey (BOSS) samples, the probability of detecting a departure from the Gaussian model is high by using measurements of the variance, but very low by using only skewness and kurtosis measurements. We find that skewness and kurtosis measurements are never likely to yield useful constraints on primordial non-Gaussianity, but future surveys should be large enough to place meaningful constraints using measurements of the galaxy variance.(Abridged)

We investigate the luminosity and colour dependence of clustering of CMASS galaxies in the Sloan Digital Sky Survey-III Baryon Oscillation Spectroscopic Survey Tenth Data Release. The halo occupation distribution framework is adopted to model the projected two-point correlation function measurements on small and intermediate scales (from $0.02$ to $60\,h^{-1}{\rm {Mpc}}$) and to interpret the observed trends and infer the connection of galaxies to dark matter halos. We find that luminous red galaxies reside in massive halos of mass $M{\sim}10^{13}$--$10^{14}\,h^{-1}{\rm M_\odot}$ and more luminous galaxies are more clustered and hosted by more massive halos. The strong small-scale clustering requires a fraction of these galaxies to be satellites in massive halos, with the fraction at the level of 5--8 per cent and decreasing with luminosity. The characteristic mass of a halo hosting on average one satellite galaxy above a luminosity threshold is about a factor $8.7$ larger than that of a halo hosting a central galaxy above the same threshold. At a fixed luminosity, progressively redder galaxies are more strongly clustered on small scales, which can be explained by having a larger fraction of these galaxies in the form of satellites in massive halos. Our clustering measurements on scales below $0.4\,h^{-1}{\rm {Mpc}}$ allow us to study the small-scale spatial distribution of satellites inside halos. While the clustering of luminosity-threshold samples can be well described by a Navarro-Frenk-White (NFW) profile, that of the reddest galaxies prefers a steeper or more concentrated profile. Finally, we also use galaxy samples of constant number density at different redshifts to study the evolution of luminous galaxies, and find the clustering to be consistent with passive evolution in the redshift range of $0.5 \lesssim z \lesssim 0.6$., Comment: MNRAS Accepted. Minor revisions from the last version

We present the distance measurement to z = 0.32 using the 11th data release of the Sloan Digital Sky Survey-III Baryon Acoustic Oscillation Survey (BOSS). We use 313,780 galaxies of the low-redshift (LOWZ) sample over 7,341 square-degrees to compute $D_V = (1264 \pm 25)(r_d/r_{d,fid})$ - a sub 2% measurement - using the baryon acoustic feature measured in the galaxy two-point correlation function and power-spectrum. We compare our results to those obtained in DR10. We study observational systematics in the LOWZ sample and quantify potential effects due to photometric offsets between the northern and southern Galactic caps. We find the sample to be robust to all systematic effects found to impact on the targeting of higher-redshift BOSS galaxies, and that the observed north-south tensions can be explained by either limitations in photometric calibration or by sample variance, and have no impact on our final result. Our measurement, combined with the baryonic acoustic scale at z = 0.57, is used in Anderson et al. (2013a) to constrain cosmological parameters., Comment: 17 pages. Submitted to MNRAS

We explore the cosmological implications of the angle-averaged correlation function, xi(s), and the clustering wedges, xi_perp(s) and xi_para(s), of the LOWZ and CMASS galaxy samples from Data Release 10 and 11 of the SDSS-III Baryon Oscillation Spectroscopic Survey. Our results show no significant evidence for a deviation from the standard LCDM model. The combination of the information from our clustering measurements with recent data from the cosmic microwave background is sufficient to constrain the curvature of the Universe to Omega_k = 0.0010 +- 0.0029, the total neutrino mass to Sum m_nu < 0.23 eV (95% confidence level), the effective number of relativistic species to N_eff=3.31 +- 0.27, and the dark energy equation of state to w_DE = -1.051 +- 0.076. These limits are further improved by adding information from type Ia supernovae and baryon acoustic oscillations from other samples. In particular, this data set combination is completely consistent with a time-independent dark energy equation of state, in which case we find w_DE=-1.024 +- 0.052. We explore the constraints on the growth-rate of cosmic structures assuming f(z)=Omega_m(z)^gamma and obtain gamma=0.69 +- 0.15, in agreement with the predictions from general relativity of gamma=0.55., Comment: 24 pages, 14 figures. Submitted to MNRAS. Measurements and covariance matrices are available at https://sdss3.org/science/boss_publications.php

We present improved methodology for including covariance matrices in the error budget of Baryon Oscillation Spectroscopic Survey (BOSS) galaxy clustering measurements, revisiting Data Release 9 (DR9) analyses, and describing a method that is used in DR10/11 analyses presented in companion papers. The precise analysis method adopted is becoming increasingly important, due to the precision that BOSS can now reach: even using as many as 600 mock catalogues to estimate covariance of 2-point clustering measurements can still lead to an increase in the errors of ~20%, depending on how the cosmological parameters of interest are measured. In this paper we extend previous work on this contribution to the error budget, deriving formulae for errors measured by integrating over the likelihood, and to the distribution of recovered best-fit parameters fitting the simulations also used to estimate the covariance matrix. Both are situations that previous analyses of BOSS have considered. We apply the formulae derived to Baryon Acoustic Oscillation (BAO) and Redshift-Space Distortion (RSD) measurements from BOSS in our companion papers. To further aid these analyses, we consider the optimum number of bins to use for 2-point measurements using the monopole power spectrum or correlation function for BAO, and the monopole and quadrupole moments of the correlation function for anisotropic-BAO and RSD measurements., Comment: 11 pages, 5 figures, MNRAS submitted

We present a one per cent measurement of the cosmic distance scale from the detections of the baryon acoustic oscillations in the clustering of galaxies from the Baryon Oscillation Spectroscopic Survey (BOSS), which is part of the Sloan Digital Sky Survey III (SDSS-III). Our results come from the Data Release 11 (DR11) sample, containing nearly one million galaxies and covering approximately $8\,500$ square degrees and the redshift range $0.2

We analyse the anisotropic clustering of the Baryon Oscillation Spectroscopic Survey (BOSS) CMASS Data Release 11 (DR11) sample, which consists of $690\,827$ galaxies in the redshift range $0.43 < z < 0.7$ and has a sky coverage of $8\,498\,\text{deg}^2$. We perform our analysis in Fourier space using a power spectrum estimator suggested by Yamamoto et al. (2006). We measure the multipole power spectra in a self-consistent manner for the first time in the sense that we provide a proper way to treat the survey window function and the integral constraint, without the commonly used assumption of an isotropic power spectrum and without the need to split the survey into sub-regions. The main cosmological signals exploited in our analysis are the Baryon Acoustic Oscillations and the signal of redshift space distortions, both of which are distorted by the Alcock-Paczynski effect. Together, these signals allow us to constrain the distance ratio $D_V(z_{\rm eff})/r_s(z_d) = 13.89\pm 0.18$, the Alcock-Paczynski parameter $F_{\rm AP}(z_{\rm eff}) = 0.679\pm0.031$ and the growth rate of structure $f(z_{\rm eff})\sigma_8(z_{\rm eff}) = 0.419\pm0.044$ at the effective redshift $z_{\rm eff}=0.57$. We did not find significant systematic uncertainties for $D_V/r_s$ or $F_{\rm AP}$ but include a systematic error for $f\sigma_8$ of $3.1\%$. Combining our dataset with Planck to test General Relativity (GR) through the simple $\gamma$-parameterisation, reveals a $\sim 2\sigma$ tension between the data and the prediction by GR. The tension between our result and GR can be traced back to a tension in the clustering amplitude $\sigma_8$ between CMASS and Planck., Comment: 30 pages, 3 Tables, 17 Figures

Sophisticated analysis of modern large-scale structure surveys requires mock catalogs. Mock catalogs are used to optimize survey design, test reduction and analysis pipelines, make theoretical predictions for basic observables and propagate errors through complex analysis chains. We present a new method, which we call "quick particle mesh", for generating many large-volume, approximate mock catalogs at low computational cost. The method is based on using rapid, low-resolution particle mesh simulations that accurately reproduce the large-scale dark matter density field. Particles are sampled from the density field based on their local density such that they have N-point statistics nearly equivalent to the halos resolved in high-resolution simulations, creating a set of mock halos that can be populated using halo occupation methods to create galaxy mocks for a variety of possible target classes., Comment: 13 pages, 16 figures. Matches version accepted by MNRAS. Code available at http://github.com/mockFactory

The Sloan Digital Sky Survey (SDSS) has been in operation since 2000 April. This paper presents the tenth public data release (DR10) from its current incarnation, SDSS-III. This data release includes the first spectroscopic data from the Apache Point Observatory Galaxy Evolution Experiment (APOGEE), along with spectroscopic data from the Baryon Oscillation Spectroscopic Survey (BOSS) taken through 2012 July. The APOGEE instrument is a near-infrared R~22,500 300-fiber spectrograph covering 1.514--1.696 microns. The APOGEE survey is studying the chemical abundances and radial velocities of roughly 100,000 red giant star candidates in the bulge, bar, disk, and halo of the Milky Way. DR10 includes 178,397 spectra of 57,454 stars, each typically observed three or more times, from APOGEE. Derived quantities from these spectra (radial velocities, effective temperatures, surface gravities, and metallicities) are also included.DR10 also roughly doubles the number of BOSS spectra over those included in the ninth data release. DR10 includes a total of 1,507,954 BOSS spectra, comprising 927,844 galaxy spectra; 182,009 quasar spectra; and 159,327 stellar spectra, selected over 6373.2 square degrees., Comment: 15 figures; 1 table. Accepted to ApJS. DR10 is available at http://www.sdss3.org/dr10 v3 fixed 3 diacritic markings in the arXiv HTML listing of the author names

The ever increasing size and complexity of data coming from simulations of cosmic structure formation demands equally sophisticated tools for their analysis. During the past decade, the art of object finding in these simulations has hence developed into an important discipline itself. A multitude of codes based upon a huge variety of methods and techniques have been spawned yet the question remained as to whether or not they will provide the same (physical) information about the structures of interest. Here we summarize and extent previous work of the "halo finder comparison project": we investigate in detail the (possible) origin of any deviations across finders. To this extent we decipher and discuss differences in halo finding methods, clearly separating them from the disparity in definitions of halo properties. We observe that different codes not only find different numbers of objects leading to a scatter of up to 20 per cent in the halo mass and Vmax function, but also that the particulars of those objects that are identified by all finders differ. The strength of the variation, however, depends on the property studied, e.g. the scatter in position, bulk velocity, mass, and the peak value of the rotation curve is practically below a few per cent, whereas derived quantities such as spin and shape show larger deviations. Our study indicates that the prime contribution to differences in halo properties across codes stems from the distinct particle collection methods and -- to a minor extent -- the particular aspects of how the procedure for removing unbound particles is implemented. We close with a discussion of the relevance and implications of the scatter across different codes for other fields such as semi-analytical galaxy formation models, gravitational lensing, and observables in general., Comment: 28 pages containing 13 figures & 4 tables + 9 pages appendix containing another 4 tables + 4 pages of references, accepted for publication in MNRAS

We present measurements of the angular diameter distance to and Hubble parameter at z=0.57 from the measurement of the baryon acoustic peak in the correlation of galaxies from the Sloan Digital Sky Survey III Baryon Oscillation Spectroscopic Survey. Our analysis is based on a sample from Data Release 9 of 264,283 galaxies over 3275 square degrees in the redshift range 0.43

We present the measurement of the two-point cross-correlation function (CCF) of 8,198 Sloan Digital Sky Survey (SDSS) Data Release 7 (DR7) quasars and 349,608 DR10 CMASS galaxies from the Baryonic Oscillation Spectroscopic Survey (BOSS) at redshift ~0.5 (0.3=0.53 from the CCF measurements. This linear bias corresponds to a characteristic host halo mass of ~4x10^12 M_sun/h, compared to ~10^13 M_sun/h characteristic host halo mass for CMASS galaxies. We divide the quasar sample in luminosity and constrain the luminosity dependence of quasar bias to be db_Q/dlogL=0.20+-0.34 or 0.11+-0.32 (depending on different luminosity divisions) for quasar luminosities -23.5>M_i(z=2)>-25.5, implying a weak luminosity dependence of quasar clustering for the bright end of the quasar population at ~0.5. We compare our measurements with theoretical predictions, Halo Occupation Distribution (HOD) models and mock catalogs. These comparisons suggest quasars reside in a broad range of host halos, and the host halo mass distributions significantly overlap with each other for quasars at different luminosities, implying a poor correlation between halo mass and instantaneous quasar luminosity. We also find that the quasar HOD parameterization is largely degenerate such that different HODs can reproduce the CCF equally well, but with different outcomes such as the satellite fraction and host halo mass distribution. These results highlight the limitations and ambiguities in modeling the distribution of quasars with the standard HOD approach and the need for additional information in populating quasars in dark matter halos with HOD. [Abridged], Comment: 20 emulateapj pages; submitted to ApJ

We measure the luminosity and color dependence and the redshift evolution of galaxy clustering in the Sloan Digital Sky Survey-III Baryon Oscillation Spectroscopic Survey Ninth Data Release. We focus on the projected two-point correlation function (2PCF) of subsets of its CMASS sample, which includes about 260,000 galaxies over ~3,300 sq. deg in the redshift range 0.43

Measuring the two-point correlation function of the galaxies in the Universe gives access to the underlying dark matter distribution, which is related to cosmological parameters and to the physics of the primordial Universe. The estimation of the correlation function for current galaxy surveys makes use of the Landy-Szalay estimator, which is supposed to reach minimal variance. This is only true, however, for a vanishing correlation function. We study the Landy-Szalay estimator when these conditions are not fulfilled and propose a new estimator that provides the smallest variance for a given survey geometry. Our estimator is a linear combination of ratios between paircounts of data and/or random catalogues (DD, RR and DR). The optimal combination for a given geometry is determined by using lognormal mock catalogues. The resulting estimator is biased in a model-dependent way, but we propose a simple iterative procedure for obtaining an unbiased model- independent estimator.Our method can be easily applied to any dataset and requires few extra mock catalogues compared to the standard Landy-Szalay analysis. Using various sets of simulated data (lognormal, second-order LPT and N-Body), we obtain a 20-25% gain on the error bars on the two-point correlation function for the SDSS geometry and $\Lambda$CDM correlation function. When applied to SDSS data (DR7 and DR9), we achieve a similar gain on the correlation functions, which translates into a 10-15% improvement over the estimation of the densities of matter $\Omega_m$ and dark energy $\Omega_\Lambda$ in an open $\Lambda$CDM model. The constraints derived from DR7 data with our estimator are similar to those obtained with the DR9 data and the Landy-Szalay estimator, which covers a volume twice as large and has a density that is three times higher., Comment: Accepted for publication A&A

We report on the small scale (0.5

The Baryon Oscillation Spectroscopic Survey (BOSS) is designed to measure the scale of baryon acoustic oscillations (BAO) in the clustering of matter over a larger volume than the combined efforts of all previous spectroscopic surveys of large scale structure. BOSS uses 1.5 million luminous galaxies as faint as i=19.9 over 10,000 square degrees to measure BAO to redshifts z<0.7. Observations of neutral hydrogen in the Lyman alpha forest in more than 150,000 quasar spectra (g<22) will constrain BAO over the redshift range 2.15