1. In-vitro enzyme inhibition, kinetics, molecular docking and dynamics simulation approaches to decoding the mechanism of Ficus virens in cholinesterase inhibition
- Author
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Hind Muteb Albadrani, Mohammed Alsaweed, Qazi Mohammad Sajid Jamal, Sharifa M. Alasiry, Sadaf Jahan, Munerah Hamed, Mehnaz Kamal, Md Tabish Rehman, and Danish Iqbal
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Ficus virens ,Alzheimer’s disease ,acetylcholinesterase ,butyrylcholinesterase ,enzyme kinetics ,molecular dynamics simulation ,Science (General) ,Q1-390 - Abstract
In the current study, we investigate the bioactive potentials and mode of action of Ficus virens bark (FVB) extract against cholinesterase enzymes, via in-vitro cell-free cholinesterase inhibition kinetics, molecular docking, ADMET and dynamic simulation. Our results illustrated that FVBM extract showed better DPPH-free radical scavenging activity (IC50 = 17.8 ± 0.46 µg/ml) and AChE inhibitory ability (IC50 = 37.2 ± 0.43 µg/ml). Kinetics study explored the mixed inhibition of AChE enzyme by FVBM extract. Furthermore, molecular docking demonstrates that compounds Diethyl Phthalate and Dinopol NOP present in FVBM extract have good ΔG: −8.6 kcal/mol and Ki; 2.01 × 106 M−1 for AChE enzyme than BuChE enzyme (ΔG: −7.6 and Ki: 3.72 × 105 M−1). A simulation study of 200 ns of best two hits and Tacrine confirms that these compounds remained inside the binding pocket of proteins and formed a stable protein-ligand complex via interacting with key residue. Further studies could provide a better understanding of the therapeutic potential of these promising compounds.
- Published
- 2024
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