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1. Gene-level alignment of single-cell trajectories

2. An organotypic atlas of human vascular cells

3. A multi-omic atlas of human embryonic skeletal development

4. Single-cell integration reveals metaplasia in inflammatory gut diseases

5. Human SARS-CoV-2 challenge uncovers local and systemic response dynamics

6. Enhanced CD95 and interleukin 18 signalling accompany T cell receptor Vβ21.3+ activation in multi-inflammatory syndrome in children

8. Systematic benchmarking of single-cell ATAC-sequencing protocols

9. Human skeletal muscle aging atlas

10. Age-specific nasal epithelial responses to SARS-CoV-2 infection

11. An integrated cell atlas of the lung in health and disease

12. Author Correction: Age-specific nasal epithelial responses to SARS-CoV-2 infection

15. Author Correction: Human SARS-CoV-2 challenge uncovers local and systemic response dynamics

16. A roadmap for the Human Developmental Cell Atlas

17. Mapping interindividual dynamics of innate immune response at single-cell resolution

20. A spatially resolved atlas of the human lung characterizes a gland-associated immune niche

22. Single-cell landscape in mammary epithelium reveals bipotent-like cells associated with breast cancer risk and outcome

23. Mapping single-cell transcriptomes in the intra-tumoral and associated territories of kidney cancer

24. A human fetal lung cell atlas uncovers proximal-distal gradients of differentiation and key regulators of epithelial fates

25. Spatial Transcriptomics of the Respiratory System.

26. Altered TMPRSS2 usage by SARS-CoV-2 Omicron impacts infectivity and fusogenicity

27. Local and systemic responses to SARS-CoV-2 infection in children and adults

29. Blood and immune development in human fetal bone marrow and Down syndrome

30. Cells of the human intestinal tract mapped across space and time

31. Germline polymorphisms in an enhancer of PSIP1 are associated with progression-free survival in epithelial ovarian cancer

33. Fine-Scale Mapping of the 5q11.2 Breast Cancer Locus Reveals at Least Three Independent Risk Variants Regulating MAP3K1

34. Single cell derived mRNA signals across human kidney tumors

35. Molecular connectomics: Placing cells into morphological tissue context.

37. Obesity Is Associated with Attenuated Tissue Immunity in COVID-19

38. Distinct microbial and immune niches of the human colon

39. Fine-scale mapping of the FGFR2 breast cancer risk locus: putative functional variants differentially bind FOXA1 and E2F1.

40. Functional Variants at the 11q13 Risk Locus for Breast Cancer Regulate Cyclin D1 Expression through Long-Range Enhancers

41. Decoding human fetal liver haematopoiesis

42. A cellular census of human lungs identifies novel cell states in health and in asthma

43. Early human lung immune cell development and its role in epithelial cell fate

44. User-friendly, scalable tools and workflows for single-cell RNA-seq analysis

45. Single-cell reconstruction of the early maternal–fetal interface in humans

46. Yolk sac cell atlas reveals multiorgan functions during human early development

47. Systematic benchmarking of single-cell ATAC-sequencing protocols

48. Childhood-onset asthma is characterized by airway epithelial hillock-to-squamous differentiation in early life

49. FastCAR:fast correction for ambient RNA to facilitate differential gene expression analysis in single-cell RNA-sequencing datasets

50. Human SARS-CoV-2 challenge resolves local and systemic response dynamics

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