21 results on '"Morin TJ"'
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2. Coprocessed heterogeneous near-infrared lasers on thin-film lithium niobate.
- Author
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Morin TJ, Peters J, Li M, Guo J, Wan Y, Xiang C, and Bowers JE
- Abstract
Thin-film lithium niobate (TFLN) is an attractive platform for photonic applications on account of its wide bandgap, its large electro-optic coefficient, and its large nonlinearity. Since these characteristics are used in systems that require a coherent light source, size, weight, power, and cost can be reduced and reliability enhanced by combining TFLN processing and heterogeneous laser fabrication. Here, we report the fabrication of laser devices on a TFLN wafer and also the coprocessing of five different GaAs-based III-V epitaxial structures, including InGaAs quantum wells and InAs quantum dots. Lasing is observed at wavelengths near 930, 1030, and 1180 nm, which, if frequency-doubled using TFLN, would produce blue, green, and orange visible light. A single-sided power over 25 mW is measured with an integrating sphere.
- Published
- 2024
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3. 3D integration enables ultralow-noise isolator-free lasers in silicon photonics.
- Author
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Xiang C, Jin W, Terra O, Dong B, Wang H, Wu L, Guo J, Morin TJ, Hughes E, Peters J, Ji QX, Feshali A, Paniccia M, Vahala KJ, and Bowers JE
- Abstract
Photonic integrated circuits are widely used in applications such as telecommunications and data-centre interconnects
1-5 . However, in optical systems such as microwave synthesizers6 , optical gyroscopes7 and atomic clocks8 , photonic integrated circuits are still considered inferior solutions despite their advantages in size, weight, power consumption and cost. Such high-precision and highly coherent applications favour ultralow-noise laser sources to be integrated with other photonic components in a compact and robustly aligned format-that is, on a single chip-for photonic integrated circuits to replace bulk optics and fibres. There are two major issues preventing the realization of such envisioned photonic integrated circuits: the high phase noise of semiconductor lasers and the difficulty of integrating optical isolators directly on-chip. Here we challenge this convention by leveraging three-dimensional integration that results in ultralow-noise lasers with isolator-free operation for silicon photonics. Through multiple monolithic and heterogeneous processing sequences, direct on-chip integration of III-V gain medium and ultralow-loss silicon nitride waveguides with optical loss around 0.5 decibels per metre are demonstrated. Consequently, the demonstrated photonic integrated circuit enters a regime that gives rise to ultralow-noise lasers and microwave synthesizers without the need for optical isolators, owing to the ultrahigh-quality-factor cavity. Such photonic integrated circuits also offer superior scalability for complex functionalities and volume production, as well as improved stability and reliability over time. The three-dimensional integration on ultralow-loss photonic integrated circuits thus marks a critical step towards complex systems and networks on silicon., (© 2023. The Author(s).)- Published
- 2023
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4. Extending the spectrum of fully integrated photonics to submicrometre wavelengths.
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Tran MA, Zhang C, Morin TJ, Chang L, Barik S, Yuan Z, Lee W, Kim G, Malik A, Zhang Z, Guo J, Wang H, Shen B, Wu L, Vahala K, Bowers JE, Park H, and Komljenovic T
- Abstract
Integrated photonics has profoundly affected a wide range of technologies underpinning modern society
1-4 . The ability to fabricate a complete optical system on a chip offers unrivalled scalability, weight, cost and power efficiency5,6 . Over the last decade, the progression from pure III-V materials platforms to silicon photonics has significantly broadened the scope of integrated photonics, by combining integrated lasers with the high-volume, advanced fabrication capabilities of the commercial electronics industry7,8 . Yet, despite remarkable manufacturing advantages, reliance on silicon-based waveguides currently limits the spectral window available to photonic integrated circuits (PICs). Here, we present a new generation of integrated photonics by directly uniting III-V materials with silicon nitride waveguides on Si wafers. Using this technology, we present a fully integrated PIC at photon energies greater than the bandgap of silicon, demonstrating essential photonic building blocks, including lasers, amplifiers, photodetectors, modulators and passives, all operating at submicrometre wavelengths. Using this platform, we achieve unprecedented coherence and tunability in an integrated laser at short wavelength. Furthermore, by making use of this higher photon energy, we demonstrate superb high-temperature performance and kHz-level fundamental linewidths at elevated temperatures. Given the many potential applications at short wavelengths, the success of this integration strategy unlocks a broad range of new integrated photonics applications., (© 2022. The Author(s).)- Published
- 2022
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5. Integrated Pockels laser.
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Li M, Chang L, Wu L, Staffa J, Ling J, Javid UA, Xue S, He Y, Lopez-Rios R, Morin TJ, Wang H, Shen B, Zeng S, Zhu L, Vahala KJ, Bowers JE, and Lin Q
- Abstract
The development of integrated semiconductor lasers has miniaturized traditional bulky laser systems, enabling a wide range of photonic applications. A progression from pure III-V based lasers to III-V/external cavity structures has harnessed low-loss waveguides in different material systems, leading to significant improvements in laser coherence and stability. Despite these successes, however, key functions remain absent. In this work, we address a critical missing function by integrating the Pockels effect into a semiconductor laser. Using a hybrid integrated III-V/Lithium Niobate structure, we demonstrate several essential capabilities that have not existed in previous integrated lasers. These include a record-high frequency modulation speed of 2 exahertz/s (2.0 × 10
18 Hz/s) and fast switching at 50 MHz, both of which are made possible by integration of the electro-optic effect. Moreover, the device co-lases at infrared and visible frequencies via the second-harmonic frequency conversion process, the first such integrated multi-color laser. Combined with its narrow linewidth and wide tunability, this new type of integrated laser holds promise for many applications including LiDAR, microwave photonics, atomic physics, and AR/VR., (© 2022. The Author(s).)- Published
- 2022
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6. Fast and accurate quantification of insertion-site specific transgene levels from raw seed samples using solid-state nanopore technology.
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Pearson MD, Nguyen L, Zhao Y, McKenna WL, Morin TJ, and Dunbar WB
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- DNA, Plant genetics, Electrophoresis, Capillary economics, Electrophoresis, Capillary methods, Nanopores, Polymerase Chain Reaction economics, Quantitative Trait, Heritable, Seeds genetics, Time Factors, Crops, Agricultural genetics, Plants, Genetically Modified genetics, Polymerase Chain Reaction methods, Glycine max genetics, Transgenes
- Abstract
Many modern crop varieties contain patented biotechnology traits, and an increasing number of these crops have multiple (stacked) traits. Fast and accurate determination of transgene levels is advantageous for a variety of use cases across the food, feed and fuel value chain. With the growing number of new transgenic crops, any technology used to quantify them should have robust assays that are simple to design and optimize, thereby facilitating the addition of new traits to an assay. Here we describe a PCR-based method that is simple to design, starts from whole seeds, and can be run to end-point in less than 5 minutes. Subsequent relative quantification (trait vs. non-trait) using capillary electrophoresis performed in 5% increments across the 0-100% range showed a mean absolute error of 1.9% (s.d. = 1.1%). We also show that the PCR assay can be coupled to non-optical solid-state nanopore sensors to give seed-to-trait quantification results with a mean absolute error of 2.3% (s.d. = 1.6%). In concert, the fast PCR and nanopore sensing stages demonstrated here can be fully integrated to produce seed-to-trait quantification results in less than 10 minutes, with high accuracy across the full dynamic range., Competing Interests: WD, MP, LN, YZ, WM, and TM are employed by Ontera. Additionally, there are three patents related to the work 1. Pearson M, Morin TJ. U.S. Patent Application No. 62/815,763, 2019 Mar. This application is currently unpublished, while all details provided in the manuscript and supporting material are sufficient to reproduce the reported results. 2. Zhao Y, MckennaW, Dunbar WB. “Fractional abundance of polynucleotide sequences in a sample.” International patent no. WO2018081178A1. 2018 May. This application is published, and cited in the paper. 3. McGrath DA, Shropshire TD, Smith AM. PCT Application No. PCT/US2019/050087, 2018 Sept. This application is currently unpublished, while all details provided in the manuscript and supporting material are sufficient to reproduce the reported results. This does not alter our adherence to PLOS ONE policies on sharing data and materials.
- Published
- 2019
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7. A handheld platform for target protein detection and quantification using disposable nanopore strips.
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Morin TJ, McKenna WL, Shropshire TD, Wride DA, Deschamps JD, Liu X, Stamm R, Wang H, and Dunbar WB
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- Antibodies, Monoclonal analysis, HIV Antibodies analysis, Humans, Indicators and Reagents, Models, Theoretical, Single Molecule Imaging, Tetanus Toxin analysis, Tumor Necrosis Factor-alpha analysis, Biosensing Techniques instrumentation, Biosensing Techniques methods, Disposable Equipment, Nanopores
- Abstract
Accessible point-of-care technologies that can provide immunoassay and molecular modalities could dramatically enhance diagnostics, particularly for infectious disease control in low-resource settings. Solid-state nanopores are simple and durable sensors with low-energy instrumentation requirements. While nanopore sensors have demonstrated efficacy for nucleic acid targets, selective detection and quantification of target proteins from sample background has not been demonstrated. We present a simple approach for electronic detection and quantification of target proteins that combines novel biomolecular engineering methods, a portable reader device and disposable nanopore test strips. The target of interest can be varied by swapping the binding domain on our engineered detection reagent, which eficiently binds in the bulk-phase to the target and subsequently generates a unique signature when passing through the pore. We show modularity of the detection reagent for two HIV antibodies, TNFα and tetanus toxin as targets. A saliva swab-to-result is demonstrated for clinically relevant HIV antibody levels (0.4-20 mg/liter) in under 60 seconds. While other strip-like assays are qualitative, the presented method is quantitative and sets the stage for simultaneous immunoassay and molecular diagnostic functionality within a single portable platform.
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- 2018
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8. Nanopore-Based Target Sequence Detection.
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Morin TJ, Shropshire T, Liu X, Briggs K, Huynh C, Tabard-Cossa V, Wang H, and Dunbar WB
- Subjects
- Electrophoresis, Polyacrylamide Gel, Electrophoretic Mobility Shift Assay, Peptide Nucleic Acids chemistry, DNA chemistry, Nanopores, Sequence Analysis, DNA methods
- Abstract
The promise of portable diagnostic devices relies on three basic requirements: comparable sensitivity to established platforms, inexpensive manufacturing and cost of operations, and the ability to survive rugged field conditions. Solid state nanopores can meet all these requirements, but to achieve high manufacturing yields at low costs, assays must be tolerant to fabrication imperfections and to nanopore enlargement during operation. This paper presents a model for molecular engineering techniques that meets these goals with the aim of detecting target sequences within DNA. In contrast to methods that require precise geometries, we demonstrate detection using a range of pore geometries. As a result, our assay model tolerates any pore-forming method and in-situ pore enlargement. Using peptide nucleic acid (PNA) probes modified for conjugation with synthetic bulk-adding molecules, pores ranging 15-50 nm in diameter are shown to detect individual PNA-bound DNA. Detection of the CFTRΔF508 gene mutation, a codon deletion responsible for ∼66% of all cystic fibrosis chromosomes, is demonstrated with a 26-36 nm pore size range by using a size-enhanced PNA probe. A mathematical framework for assessing the statistical significance of detection is also presented.
- Published
- 2016
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9. Characterization of a monoclonal antibody to a novel glycan-dependent epitope in the V1/V2 domain of the HIV-1 envelope protein, gp120.
- Author
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Doran RC, Morales JF, To B, Morin TJ, Theolis R Jr, O'Rourke SM, Yu B, Mesa KA, and Berman PW
- Subjects
- AIDS Vaccines immunology, AIDS Vaccines isolation & purification, Amino Acid Sequence, Animals, Antibodies, Monoclonal chemistry, Antibodies, Neutralizing immunology, Antibodies, Neutralizing isolation & purification, Cells, Cultured, Epitope Mapping, Epitopes chemistry, HEK293 Cells, HIV Envelope Protein gp120 chemistry, HIV Envelope Protein gp120 genetics, Humans, Mice, Mice, Inbred BALB C, Molecular Sequence Data, Mutagenesis, Site-Directed, Protein Structure, Tertiary, Antibodies, Monoclonal immunology, Epitopes immunology, HIV Envelope Protein gp120 immunology, Polysaccharides immunology
- Abstract
Recent studies have described several broadly neutralizing monoclonal antibodies (bN-mAbs) that recognize glycan-dependent epitopes (GDEs) in the HIV-1 envelope protein, gp120. These were recovered from HIV-1 infected subjects, and several (e.g., PG9, PG16, CH01, CH03) target glycans in the first and second variable (V1/V2) domain of gp120. The V1/V2 domain is thought to play an important role in conformational masking, and antibodies to the V1/V2 domain were recently identified as the only immune response that correlated with protection in the RV144 HIV-1 vaccine trial. While the importance of antibodies to polymeric glycans is well established for vaccines targeting bacterial diseases, the importance of antibodies to glycans in vaccines targeting HIV has only recently been recognized. Antibodies to GDEs may be particularly significant in HIV vaccines based on gp120, where 50% of the molecular mass of the envelope protein is contributed by N-linked carbohydrate. However, few studies have reported antibodies to GDEs in humans or animals immunized with candidate HIV-1 vaccines. In this report, we describe the isolation of a mouse mAb, 4B6, after immunization with the extracellular domain of the HIV-1 envelope protein, gp140. Epitope mapping using glycopeptide fragments and in vitro mutagenesis showed that binding of this antibody depends on N-linked glycosylation at asparagine N130 (HXB2 numbering) in the gp120 V1/V2 domain. Our results demonstrate that, in addition to natural HIV-1 infection, immunization with recombinant proteins can elicit antibodies to the GDEs in the V1/V2 domain of gp120. Although little is known regarding conditions that favor antibody responses to GDEs, our studies demonstrate that these antibodies can arise from a short-term immunization regimen. Our results suggest that antibodies to GDEs are more common than previously suspected, and that further analysis of antibody responses to the HIV-1 envelope protein will lead to the discovery of additional antibodies to GDEs., (Copyright © 2014 Elsevier Ltd. All rights reserved.)
- Published
- 2014
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10. Homoleptic nickel(II) complexes of redox-tunable pincer-type ligands.
- Author
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Hewage JS, Wanniarachchi S, Morin TJ, Liddle BJ, Banaszynski M, Lindeman SV, Bennett B, and Gardinier JR
- Subjects
- Crystallography, X-Ray, Electrochemical Techniques, Gallium chemistry, Ligands, Models, Molecular, Molecular Structure, Organometallic Compounds chemical synthesis, Oxidation-Reduction, Quantum Theory, Nickel chemistry, Organometallic Compounds chemistry
- Abstract
Different synthetic methods have been developed to prepare eight new redox-active pincer-type ligands, H(X,Y), that have pyrazol-1-yl flanking donors attached to an ortho-position of each ring of a diarylamine anchor and that have different groups, X and Y, at the para-aryl positions. Together with four previously known H(X,Y) ligands, a series of 12 Ni(X,Y)2 complexes were prepared in high yields by a simple one-pot reaction. Six of the 12 derivatives were characterized by single-crystal X-ray diffraction, which showed tetragonally distorted hexacoordinate nickel(II) centers. The nickel(II) complexes exhibit two quasi-reversible one-electron oxidation waves in their cyclic voltammograms, with half-wave potentials that varied over a remarkable 700 mV range with the average of the Hammett σ(p) parameters of the para-aryl X, Y groups. The one- and two-electron oxidized derivatives [Ni(Me,Me)2](BF4)n (n = 1, 2) were prepared synthetically, were characterized by X-band EPR, electronic spectroscopy, and single-crystal X-ray diffraction (for n = 2), and were studied computationally by DFT methods. The dioxidized complex, [Ni(Me,Me)2](BF4)2, is an S = 2 species, with nickel(II) bound to two ligand radicals. The mono-oxidized complex [Ni(Me,Me)2](BF4), prepared by comproportionation, is best described as nickel(II) with one ligand centered radical. Neither the mono- nor the dioxidized derivative shows any substantial electronic coupling between the metal and their bound ligand radicals because of the orthogonal nature of their magnetic orbitals. On the other hand, weak electronic communication occurs between ligands in the mono-oxidized complex as evident from the intervalence charge transfer (IVCT) transition found in the near-IR absorption spectrum. Band shape analysis of the IVCT transition allowed comparisons of the strength of the electronic interaction with that in the related, previously known, Robin-Day class II mixed valence complex, [Ga(Me,Me)2](2+)., Competing Interests: Notes The authors declare no competing financial interest.
- Published
- 2014
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11. HIV-1 envelope proteins and V1/V2 domain scaffolds with mannose-5 to improve the magnitude and quality of protective antibody responses to HIV-1.
- Author
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Morales JF, Morin TJ, Yu B, Tatsuno GP, O'Rourke SM, Theolis R Jr, Mesa KA, and Berman PW
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- AIDS Vaccines genetics, AIDS Vaccines pharmacology, Animals, Antibodies, Monoclonal, Murine-Derived immunology, Glycosylation, HIV Antibodies genetics, HIV Envelope Protein gp120 genetics, HIV-1 genetics, Humans, Mannose genetics, Protein Structure, Secondary, Protein Structure, Tertiary, Rabbits, AIDS Vaccines immunology, Antibodies, Neutralizing immunology, HIV Antibodies immunology, HIV Envelope Protein gp120 immunology, HIV-1 immunology, Mannose immunology
- Abstract
Two lines of investigation have highlighted the importance of antibodies to the V1/V2 domain of gp120 in providing protection from HIV-1 infection. First, the recent RV144 HIV-1 vaccine trial documented a correlation between non-neutralizing antibodies to the V2 domain and protection. Second, multiple broadly neutralizing monoclonal antibodies to the V1/V2 domain (e.g. PG9) have been isolated from rare infected individuals, termed elite neutralizers. Interestingly, the binding of both types of antibodies appears to depend on the same cluster of amino acids (positions 167–171) adjacent to the junction of the B and C strands of the four-stranded V1/V2 domain β-sheet structure. However, the broadly neutralizing mAb, PG9, additionally depends on mannose-5 glycans at positions 156 and 160 for binding. Because the gp120 vaccine immunogens used in previous HIV-1 vaccine trials were enriched for complex sialic acid-containing glycans, and lacked the high mannose structures required for the binding of PG9-like mAbs, we wondered if these immunogens could be improved by limiting glycosylation to mannose-5 glycans. Here, we describe the PG9 binding activity of monomeric gp120s from multiple strains of HIV-1 produced with mannose-5 glycans. We also describe the properties of glycopeptide scaffolds from the V1/V2 domain also expressed with mannose-5 glycans. The V1/V2 scaffold from the A244 isolate was able to bind the PG9, CH01, and CH03 mAbs with high affinity provided that the proper glycans were present. We further show that immunization with A244 V1/V2 fragments alone, or in a prime/boost regimen with gp120, enhanced the antibody response to sequences in the V1/V2 domain associated with protection in the RV144 trial.
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- 2014
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12. Analytical characterization of a monoclonal antibody therapeutic reveals a three-light chain species that is efficiently removed using hydrophobic interaction chromatography.
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Wollacott RB, Casaz PL, Morin TJ, Zhu HL, Anderson RS, Babcock GJ, Que J, Thomas WD Jr, and Ozturk SS
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- Animals, CHO Cells, Cells, Cultured, Chromatography, High Pressure Liquid, Cricetinae, Cricetulus, Humans, Hydrophobic and Hydrophilic Interactions, Molecular Weight, Antibodies, Monoclonal chemistry, Electrophoresis, Polyacrylamide Gel, Immunoglobulin Light Chains chemistry
- Abstract
Size exclusion high performance liquid chromatography analysis of a human monoclonal antibody (mAb) showed the presence of a new species that eluted with a retention time between the dimeric and monomeric species of the antibody. Extensive characterization of this species, referred to as "shoulder," indicated that it was a mAb containing an extra light chain and had a molecular weight of approximately 175 kDa. The extra light chain was found to be non-covalently associated with the Fab portion of the protein. The relative amount of shoulder (typically 1-3% of the total mAb present) varied with the Chinese hamster ovary cell line producing the mAb and was not influenced by the growth conditions. Our three-step mAb purification platform using protein A, anion exchange, and cation exchange process steps was successful at removing dimer and higher and lower molecular weight species, but not the shoulder impurity. It was found that hydrophobic interaction chromatography could be used in place of cation exchange to exploit the subtle differences in hydrophobicity between monomer and shoulder. We developed an antibody polishing process using Butyl Sepharose HP resin that is capable of removing the majority of high and low molecular weight impurities yielding 99% pure mAb monomer, virtually devoid of the shoulder species, with a step recovery of about 80%.
- Published
- 2013
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13. Human monoclonal antibody HCV1 effectively prevents and treats HCV infection in chimpanzees.
- Author
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Morin TJ, Broering TJ, Leav BA, Blair BM, Rowley KJ, Boucher EN, Wang Y, Cheslock PS, Knauber M, Olsen DB, Ludmerer SW, Szabo G, Finberg RW, Purcell RH, Lanford RE, Ambrosino DM, Molrine DC, and Babcock GJ
- Subjects
- Amino Acid Sequence, Animals, Cell Line, Disease Models, Animal, Hepatitis C immunology, Hepatitis C virology, Hepatitis C, Chronic immunology, Humans, Liver Transplantation, Mutation, Neutralization Tests, Pan troglodytes, RNA, Viral blood, Tetraspanin 28 metabolism, Viral Envelope Proteins genetics, Viral Envelope Proteins metabolism, Viral Load, Antibodies, Monoclonal therapeutic use, Hepacivirus immunology, Hepatitis C prevention & control, Hepatitis C Antibodies therapeutic use, Hepatitis C, Chronic therapy
- Abstract
Hepatitis C virus (HCV) infection is a leading cause of liver transplantation and there is an urgent need to develop therapies to reduce rates of HCV infection of transplanted livers. Approved therapeutics for HCV are poorly tolerated and are of limited efficacy in this patient population. Human monoclonal antibody HCV1 recognizes a highly-conserved linear epitope of the HCV E2 envelope glycoprotein (amino acids 412-423) and neutralizes a broad range of HCV genotypes. In a chimpanzee model, a single dose of 250 mg/kg HCV1 delivered 30 minutes prior to infusion with genotype 1a H77 HCV provided complete protection from HCV infection, whereas a dose of 50 mg/kg HCV1 did not protect. In addition, an acutely-infected chimpanzee given 250 mg/kg HCV1 42 days following exposure to virus had a rapid reduction in viral load to below the limit of detection before rebounding 14 days later. The emergent virus displayed an E2 mutation (N415K/D) conferring resistance to HCV1 neutralization. Finally, three chronically HCV-infected chimpanzees were treated with a single dose of 40 mg/kg HCV1 and viral load was reduced to below the limit of detection for 21 days in one chimpanzee with rebounding virus displaying a resistance mutation (N417S). The other two chimpanzees had 0.5-1.0 log(10) reductions in viral load without evidence of viral resistance to HCV1. In vitro testing using HCV pseudovirus (HCVpp) demonstrated that the sera from the poorly-responding chimpanzees inhibited the ability of HCV1 to neutralize HCVpp. Measurement of antibody responses in the chronically-infected chimpanzees implicated endogenous antibody to E2 and interference with HCV1 neutralization although other factors may also be responsible. These data suggest that human monoclonal antibody HCV1 may be an effective therapeutic for the prevention of graft infection in HCV-infected patients undergoing liver transplantation.
- Published
- 2012
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14. Chemical control of metabolically-engineered voltage-gated K+ channels.
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Hua Z, Lvov A, Morin TJ, and Kobertz WR
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- Animals, CHO Cells, Cricetinae, Cricetulus, Potassium Channels metabolism, Ion Channel Gating, Potassium Channels chemistry
- Abstract
Metabolic oligosaccharide engineering is a powerful approach for installing unnatural glycans with unique functional groups into the glycocalyx of living cells and animals. Using this approach, we showed that K(+) channel complexes decorated with thiol-containing sialic acids were irreversibly inhibited with scorpion toxins bearing a pendant maleimide group. Irreversible inhibition required a glycosylated K(+) channel subunit and was completely reversible with mild reductant when the tether connecting the toxin to the maleimide contained a disulfide bond. Cleavage of the disulfide bond not only restored function, but delivered a biotin moiety to the modified K(+) channel subunit, providing a novel approach for preferentially labeling wild type K(+) channel complexes functioning in cells., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2011
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15. Pyrazolyl methyls prescribe the electronic properties of iron(II) tetra(pyrazolyl)lutidine chloride complexes.
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Morin TJ, Wanniarachchi S, Gwengo C, Makura V, Tatlock HM, Lindeman SV, Bennett B, Long GJ, Grandjean F, and Gardinier JR
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- Electrochemistry, Methanol chemistry, Molecular Structure, X-Ray Diffraction, Cyclic N-Oxides chemistry, Iron chemistry, Organometallic Compounds chemistry, Pyrazoles chemistry
- Abstract
A series of iron(II) chloride complexes of pentadentate ligands related to α,α,α',α'-tetra(pyrazolyl)-2,6-lutidine, pz(4)lut, has been prepared to evaluate whether pyrazolyl substitution has any systematic impact on the electronic properties of the complexes. For this purpose, the new tetrakis(3,4,5-trimethylpyrazolyl)lutidine ligand, pz**(4)lut, was prepared via a CoCl(2)-catalyzed rearrangement reaction. The equimolar combination of ligand and FeCl(2) in methanol gives the appropriate 1:1 complexes [FeCl(pz(R)(4)lut)]Cl that are each isolated in the solid state as a hygroscopic solvate. In solution, the iron(II) complexes have been fully characterized by several spectroscopic methods and cyclic voltammetry. In the solid state, the complexes have been characterized by X-ray diffraction, and, in some cases, by Mössbauer spectroscopy. The Mössbauer studies show that the complexes remain high spin to 4 K and exclude spin-state changes as the cause of the surprising solid-state thermochromic properties of the complexes. Non-intuitive results of spectroscopic and structural studies showed that methyl substitution at the 3- and 5- positions of the pyrazolyl rings reduces the ligand field strength through steric effects whereas methyl substitution at the 4-position of the pyrazolyl rings increases the ligand field strength through inductive effects., (This journal is © The Royal Society of Chemistry 2011)
- Published
- 2011
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16. Breaking the cycle: impact of sterically-tailored tetra(pyrazolyl)lutidines on the self-assembly of silver(I) complexes.
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Morin TJ, Merkel A, Lindeman SV, and Gardinier JR
- Abstract
A improved preparation of the pentadentate ligand alpha,alpha,alpha',alpha'-tetra(pyrazolyl)lutidine, pz(4)lut, and the syntheses of three new alkyl-substituted pyrazolyl derivatives pz(4')(4)lut (pz(4') = 4-methylpyrazolyl), pz*(4)lut (pz* = 3,5-dimethylpyrazolyl), and pz(DIP)(4)lut (pz(DIP) = 3,5-diisopropylpyrazolyl) are described. The silver(I) complexes of these ligands were studied to ascertain the impact of pyrazolyl substitution, if any, on their binding modes and on solubility issues. In the solid state, [Ag(pz(4)lut)](BF(4)) (1), [Ag(pz(4')(4)lut)](BF(4)) (2), and [Ag(pz*(4)lut)](BF(4)) (3) give cyclic dications as a result of two ligands sandwiching two silver centers where each ligand binds the metals through only pyrazolyl nitrogen donors. This cyclic motif is similar to those observed in the silver complexes of tetra(pyridyl)lutidine PY5-R derivatives (where the central pyridyl does not bind) and in related tetra(pyrazolyl)-m-xylene complexes. While suitable single crystals of [Ag(pz(DIP)(4)lut)](BF(4)) (4) could not be obtained, those of [Ag(pz(DIP)(4)lut)](OTf) (5) showed infinite polymeric chains secured via silver-bound mu-kappa(2)N(pz),kappa(2)N(pz)- ligands. The different binding mode of the latter ligand versus the former three is likely due to unfavorable steric interactions between the bulky iso-propyl (pyrazolyl) substituents and the central pyridyl rings of hypothetical cyclic architectures. The combined electrospray ionization mass spectrometry (ESI(+)-MS), variable-temperature NMR (VT NMR), and diffusion pulsed field-gradient spin-echo (PFGSE) NMR data indicate that the solid state structures of each 1-5 are neither retained nor static in CD(3)CN, rather the cations are monomeric in solution.
- Published
- 2010
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17. Tethering chemistry and K+ channels.
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Morin TJ and Kobertz WR
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- Animals, Biochemistry methods, Crystallography, X-Ray methods, Cysteine chemistry, Electrophysiology methods, Humans, Ion Channel Gating, Ligands, Membrane Potentials, Models, Biological, Models, Chemical, Molecular Conformation, Neurons metabolism, Protein Conformation, Potassium Channels, Voltage-Gated metabolism
- Abstract
Voltage-gated K+ channels are dynamic macromolecular machines that open and close in response to changes in membrane potential. These multisubunit membrane-embedded proteins are responsible for governing neuronal excitability, maintaining cardiac rhythmicity, and regulating epithelial electrolyte homeostasis. High resolution crystal structures have provided snapshots of K+ channels caught in different states with incriminating molecular detail. Nonetheless, the connection between these static images and the specific trajectories of K+ channel movements is still being resolved by biochemical experimentation. Electrophysiological recordings in the presence of chemical modifying reagents have been a staple in ion channel structure/function studies during both the pre- and post-crystal structure eras. Small molecule tethering agents (chemoselective electrophiles linked to ligands) have proven to be particularly useful tools for defining the architecture and motions of K+ channels. This Minireview examines the synthesis and utilization of chemical tethering agents to probe and manipulate the assembly, structure, function, and molecular movements of voltage-gated K+ channel protein complexes.
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- 2008
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18. First-row transition-metal complexes of a new pentadentate ligand, alpha,alpha,alpha',alpha'-tetra(pyrazolyl)lutidine.
- Author
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Morin TJ, Bennett B, Lindeman SV, and Gardinier JR
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- Electrons, Ligands, Organometallic Compounds chemistry, Pyrazoles chemistry, Pyridines chemistry, Organometallic Compounds chemical synthesis, Pyrazoles chemical synthesis, Pyridines chemical synthesis, Transition Elements chemistry
- Abstract
A new pentadentate ligand, alpha,alpha,alpha',alpha'-tetra(pyrazolyl)lutidine, pz 4lut, has been prepared by a CoCl 2-catalyzed rearrangement reaction between 2,6-pyridinedicarboxaldehyde and dipyrazolylthione. The coordination chemistry with some divalent first-row transition metal (Mn, Fe, Co, Ni, Cu, and Zn) chlorides has been explored. The electronic properties indicate that the new kappa (5)N ligand is a slightly stronger-field donor to Ni (2+) and Co (2+) than a related pentadentate ligand with five pyridyl donors presumably because of greater interaction between the metal and axial pyridyl.
- Published
- 2008
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19. Counting membrane-embedded KCNE beta-subunits in functioning K+ channel complexes.
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Morin TJ and Kobertz WR
- Subjects
- Animals, Cell Membrane drug effects, Cell Membrane metabolism, Charybdotoxin chemical synthesis, Charybdotoxin chemistry, Charybdotoxin pharmacology, Disulfides chemical synthesis, Disulfides chemistry, Humans, KCNQ1 Potassium Channel antagonists & inhibitors, KCNQ1 Potassium Channel metabolism, Oocytes metabolism, Potassium Channels, Voltage-Gated antagonists & inhibitors, Potassium Channels, Voltage-Gated metabolism, Protein Subunits antagonists & inhibitors, Protein Subunits metabolism, Xenopus, Cell Membrane chemistry, Charybdotoxin analogs & derivatives, Disulfides pharmacology, KCNQ1 Potassium Channel analysis, Potassium Channels, Voltage-Gated analysis, Protein Subunits analysis
- Abstract
Ion channels are multisubunit proteins responsible for the generation and propagation of action potentials in nerve, skeletal muscle, and heart as well as maintaining salt and water homeostasis in epithelium. The subunit composition and stoichiometry of these membrane protein complexes underlies their physiological function, as different cells pair ion-conducting alpha-subunits with specific regulatory beta-subunits to produce complexes with diverse ion-conducting and gating properties. However, determining the number of alpha- and beta-subunits in functioning ion channel complexes is challenging and often fraught with contradictory results. Here we describe the synthesis of a chemically releasable, irreversible K(+) channel inhibitor and its iterative application to tally the number of beta-subunits in a KCNQ1/KCNE1 K(+) channel complex. Using this inhibitor in electrical recordings, we definitively show that there are two KCNE subunits in a functioning tetrameric K(+) channel, breaking the apparent fourfold arrangement of the ion-conducting subunits. This digital determination rules out any measurable contribution from supra, sub, and multiple stoichiometries, providing a uniform structural picture to interpret KCNE beta-subunit modulation of voltage-gated K(+) channels and the inherited mutations that cause dysfunction. Moreover, the architectural asymmetry of the K(+) channel complex affords a unique opportunity to therapeutically target ion channels that coassemble with KCNE beta-subunits.
- Published
- 2008
- Full Text
- View/download PDF
20. BORAZANs: tunable fluorophores based on 2-(pyrazolyl)aniline chelates of diphenylboron.
- Author
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Liddle BJ, Silva RM, Morin TJ, Macedo FP, Shukla R, Lindeman SV, and Gardinier JR
- Subjects
- Magnetic Resonance Spectroscopy, Models, Molecular, Spectrophotometry, Infrared, Aniline Compounds chemistry, Boron Compounds chemistry, Chelating Agents chemistry, Fluorescent Dyes chemistry, Pyrazoles chemistry
- Abstract
The reaction between 2-pyrazolyl-4-X-anilines, H(pzAnX), (X = para-OMe (L1), Me (L2), H (L3), Cl (L4), CO2Et (L5), CF3 (L6), CN (L7)) and triphenylboron in boiling toluene affords the respective, highly emissive N,N'-boron chelate complexes, BPh2(pzAnX) (X = para-OMe (1), Me (2), H (3), Cl (4), CO2Et (5), CF3 (6), CN (7)) in high yield. The structural, electrochemical, and photophysical properties of the new boron complexes can be fine-tuned by varying the electron-withdrawing or -donating power of the para-aniline substituent (delineated by the substituent's Hammett parameter). Those complexes with electron-withdrawing para-aniline substituents such as CO2Et (5), CF3 (6), and CN (7) have more planar chelate rings, more 'quinoidal' distortion in the aniline rings, greater chemical stability, higher oxidation potentials, and more intense (phiF = 0.81 for 7 in toluene), higher-energy (blue) fluorescent emission compared to those with electron-donating substituents. Thus, for 1 the oxidation potential is 0.53 V versus Ag/AgCl (compared to 1.12 V for 7), and the emission is tuned to the yellow-green but at an expense in terms of lower quantum yields (phiF = 0.07 for 1 in toluene) and increased chemical reactivity. Density functional calculations (B3LYP/6-31G*) on PM3 energy-minimized structures of the ligands and boron complexes reproduced experimentally observed data and trends and provided further insight into the nature of the electronic transitions.
- Published
- 2007
- Full Text
- View/download PDF
21. A derivatized scorpion toxin reveals the functional output of heteromeric KCNQ1-KCNE K+ channel complexes.
- Author
-
Morin TJ and Kobertz WR
- Subjects
- Amino Acid Sequence, Animals, KCNQ1 Potassium Channel drug effects, KCNQ1 Potassium Channel genetics, Mutagenesis, Site-Directed, Patch-Clamp Techniques, Potassium Channels, Voltage-Gated drug effects, Potassium Channels, Voltage-Gated genetics, Xenopus, KCNQ1 Potassium Channel chemistry, Potassium Channels, Voltage-Gated chemistry, Scorpion Venoms chemistry, Scorpion Venoms pharmacology
- Abstract
KCNE transmembrane peptides are a family of modulatory beta-subunits that assemble with voltage-gated K+ channels, producing the diversity of potassium currents needed for proper function in a variety of tissues. Although all five KCNE transcripts have been found in cardiac and other tissues, it is unclear whether two different KCNE peptides can assemble with the same K+ channel to form a functional complex. Here, we describe the derivatization of a scorpion toxin that irreversibly inhibits KCNQ1 (Q1) K+ channel complexes that contain a specific KCNE peptide. Using this KCNE sensor, we show that heteromeric complexes form, and the functional output from these complexes reveals a hierarchy in KCNE modulation of Q1 channels: KCNE3 > KCNE1 >> KCNE4. Furthermore, our results demonstrate that Q1/KCNE1/KCNE4 complexes also generate a slowly activating current that has been previously attributed to homomeric Q1/KCNE1 complexes, providing a potential functional role for KCNE4 peptides in the heart.
- Published
- 2007
- Full Text
- View/download PDF
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