27 results on '"Muller, Heloise"'
Search Results
2. Temporal dynamics of woolly mammoth genome erosion prior to extinction
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Dehasque, Marianne, Morales, Hernán E., Díez-del-Molino, David, Pečnerová, Patrícia, Chacón-Duque, J. Camilo, Kanellidou, Foteini, Muller, Héloïse, Plotnikov, Valerii, Protopopov, Albert, Tikhonov, Alexei, Nikolskiy, Pavel, Danilov, Gleb K., Giannì, Maddalena, van der Sluis, Laura, Higham, Tom, Heintzman, Peter D., Oskolkov, Nikolay, Gilbert, M. Thomas P., Götherström, Anders, van der Valk, Tom, Vartanyan, Sergey, and Dalén, Love
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- 2024
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3. Numerical modelling of tidal sediment dynamics in the Bay of Brest over the Holocene: How the use of a process-based model over paleoenvironmental reconstitutions can help understand long-term tidal deposits?
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Olivier, Matthieu Guillaume, Leroux, Estelle, Granjeon, Didier, Le Hir, Pierre, Rabineau, Marina, Le Roy, Pascal, Simplet, Laure, Ehrhold, Axel, and Muller, Héloïse
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- 2023
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4. Numerical modelling of a Macrotidal Bay over the last 9,000 years: An interdisciplinary methodology to understand the influence of sea-level variations on tidal currents in the Bay of Brest
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Guillaume Olivier, Matthieu, Leroux, Estelle, Rabineau, Marina, Le Hir, Pierre, Granjeon, Didier, Chataigner, Teddy, Beudin, Alexis, and Muller, Heloise
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- 2021
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5. The Impact of Centromeres on Spatial Genome Architecture
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Muller, Héloïse, Gil, José, Jr, and Drinnenberg, Ines Anna
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- 2019
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6. Infragravity waves: From driving mechanisms to impacts
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Bertin, Xavier, de Bakker, Anouk, van Dongeren, Ap, Coco, Giovanni, André, Gael, Ardhuin, Fabrice, Bonneton, Philippe, Bouchette, Frédéric, Castelle, Bruno, Crawford, Wayne C., Davidson, Mark, Deen, Martha, Dodet, Guillaume, Guérin, Thomas, Inch, Kris, Leckler, Fabien, McCall, Robert, Muller, Héloïse, Olabarrieta, Maitane, Roelvink, Dano, Ruessink, Gerben, Sous, Damien, Stutzmann, Éléonore, and Tissier, Marion
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- 2018
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7. Towards the Development of a Storm Erosion EWS for the French Aquitaine Coast
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Lerma, Alexandre Nicolae, Bulteau, Thomas, Muller, Héloise, Decarsin, Clément, Gillet, Raphael, Paris, François, Biausque, Mélanie, Senechal, Nadia, and Castelle, Bruno
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- 2018
8. 3D organization of synthetic and scrambled chromosomes
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Mercy, Guillaume, Mozziconacci, Julien, Scolari, Vittore F., Yang, Kun, Zhao, Guanghou, Thierry, Agnès, Luo, Yisha, Mitchell, Leslie A., Shen, Michael, Shen, Yue, Walker, Roy, Zhang, Weimin, Wu, Yi, Xie, Ze-xiong, Luo, Zhouqing, Cai, Yizhi, Dai, Junbiao, Yang, Huanming, Yuan, Ying-Jin, Boeke, Jef D., Bader, Joel S., Muller, Héloïse, and Koszul, Romain
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- 2017
9. Assessing Storm Impact on a French Coastal Dune System Using Morphodynamic Modeling
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Muller, Héloïse, van Rooijen, Arnold, Idier, Déborah, Pedreros, Rodrigo, and Rohmer, Jérémy
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- 2017
10. Total Synthesis of a Functional Designer Eukaryotic Chromosome
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Annaluru, Narayana, Muller, Héloïse, Mitchell, Leslie A., Ramalingam, Sivaprakash, Stracquadanio, Giovanni, Richardson, Sarah M., Dymond, Jessica S., Kuang, Zheng, Scheifele, Lisa Z., Cooper, Eric M., Cai, Yizhi, Zeller, Karen, Agmon, Neta, Han, Jeffrey S., Hadjithomas, Michalis, Tullman, Jennifer, Caravelli, Katrina, Cirelli, Kimberly, Guo, Zheyuan, London, Viktoriya, Yeluru, Apurva, Murugan, Sindurathy, Kandavelou, Karthikeyan, Agier, Nicolas, Fischer, Gilles, Yang, Kun, Martin, Andrew, Bilgel, Murat, Bohutski, Pavlo, Boulier, Kristin M., Capaldo, Brian J., Chang, Joy, Charoen, Kristie, Choi, Woo Jin, Deng, Peter, DiCarlo, James E., Doong, Judy, Dunn, Jessilyn, Feinberg, Jason I., Fernandez, Christopher, Floria, Charlotte E., Gladowski, David, Hadidi, Pasha, Ishizuka, Isabel, Jabbari, Javaneh, Lau, Calvin Y. L., Lee, Pablo A., Li, Sean, Lin, Denise, Linder, Matthias E., Ling, Jonathan, Liu, Jaime, Liu, Jonathan, London, Mariya, Ma, Henry, Mao, Jessica, McDade, Jessica E., McMillan, Alexandra, Moore, Aaron M., Oh, Won Chan, Ouyang, Yu, Patel, Ruchi, Paul, Marina, Paulsen, Laura C., Qiu, Judy, Rhee, Alex, Rubashkin, Matthew G., Soh, Ina Y., Sotuyo, Nathaniel E., Srinivas, Venkatesh, Suarez, Allison, Wong, Andy, Wong, Remus, Xie, Wei Rose, Xu, Yijie, Yu, Allen T., Koszul, Romain, Bader, Joel S., Boeke, Jef D., and Chandrasegaran, Srinivasan
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- 2014
11. Article 8 MSFD Assessment Guidance
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Acangeli, Antonella, Authier, Matthieu, Baccetti, Nicola, Borsani, Junio Fabrizio, Cachera, Marie, Cariou, Valerie, Canals, Miquel, Casier, Maud, Cavenne, Elise, Claro, Françoise, Coatu, Valentina, Connor, David, Consalvo, Ivan, Cardoso, Ana, Dalu, Massimo, Dierschke, Volker, Ducommun, Laure, Fleming, Vivi, Fortibuoni, Tomaso, Galgani, François, Gonzalez-Pola, Cesar, Gaudin, François, Gerigny, Olivia, Gilles, Anita, Giorgi, Giordano, Girard, Fanny, Häubner, Norbert, Hauswirth, Mirko, Hatzianestis, Ioannis, Hernández Sánchez, Maria Teresa, Heyden, Birgit, Kennouche, Paul, Korpinen, Samuli, Koschniski, Sven, Kreutle, Axel, Lacroix, Camille, Lamesa, Gabriele, Lauriano, Giancarlo, Courtois, Florent Le, Lefkaditou, Evgenia, Maggi, Chiara, García-Denche, Lucía Martínez, Matiddi, Marco, Mihail, Otilia, Mo, Giulia, Muller, Heloise, Nyström Sandman, Antonia, Ocadhla, Oliver, Otero Matias, Joana, Palialexis, Andreas, Papdopoulou, Nadia, Peterlin, Monika, Pettersson, Karin, Pezzo, Francesco, Pulcini, Marina, Punzon, Antonio, Raabe, Thomas, Raicevich, Sasa, Rindorf, Anna, Rivet, Jehanne, Ronchini, Francesca, Salvany, Lara, Schilder, Jos, Schroeder, Alexander, Sigray, Peter, Silvestri, Cecilia, Spitz, Jérôme, Strand, Jakob, Tixier, Celine, Tornero, Victoria, Tunesi, Leonardo, Valanko, Sebastian, van Hoey, Gert, van Lancker, Vera, Van, Willem, Varenius, Kerstin, Vaz, Sandrine, Weiß, Andrea, Zenatello, Marco, and Lacalle, Martine
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[SDE] Environmental Sciences - Published
- 2022
12. Genomic polymorphism in the population of Candida glabrata: Gene copy-number variation and chromosomal translocations
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Muller, Héloïse, Thierry, Agnès, Coppée, Jean-Yves, Gouyette, Catherine, Hennequin, Christophe, Sismeiro, Odile, Talla, Emmanuel, Dujon, Bernard, and Fairhead, Cécile
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- 2009
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13. Estimating the Lagrangian residual circulation in the Iroise Sea
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Muller, Héloïse, Blanke, Bruno, Dumas, Franck, Lekien, Francois, and Mariette, Vincent
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- 2009
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14. Formation of the CenH3-Deficient Holocentromere in Lepidoptera Avoids Active Chromatin
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Senaratne, Aruni P., Muller, Héloïse, Fryer, Kelsey A., Kawamoto, Munetaka, Katsuma, Susumu, and Drinnenberg, Ines A.
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- 2021
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15. Numerical modelling of a Macrotidal Bay over the last 9,000 years: An interdisciplinary methodology to understand the influence of sea-level variations on tidal currents in the Bay of Brest
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Olivier, Matthieu, primary, Leroux, Estelle, additional, Rabineau, Marina, additional, Le Hir, Pierre, additional, Granjeon, Didier, additional, Chataigner, Teddy, additional, Beudin, Alexis, additional, and Muller, HeloIse, additional
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- 2021
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16. Synthetic chromosome arms function in yeast and generate phenotypic diversity by design
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Dymond, Jessica S., Richardson, Sarah M., Coombes, Candice E., Babatz, Timothy, Muller, Heloise, Annaluru, Narayana, Blake, William J., Schwerzmann, Joy W., Dai, Junbiao, Lindstrom, Derek L., Boeke, Annabel C., Gottschling, Daniel E., Chandrasegaran, Srinivasan, Bader, Joel S., and Boeke, Jef D.
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Yeast fungi -- Genetic aspects ,DNA synthesis -- Research ,Genomes -- Research ,Chromosomes -- Research ,Phenotype -- Research ,Synthetic biology -- Research ,Environmental issues ,Science and technology ,Zoology and wildlife conservation - Abstract
Recent advances in DNA synthesis technology have enabled the construction of novel genetic pathways and genomic elements, furthering our understanding of system-level phenomena (1-7). The ability to synthesize large segments of DNA allows the engineering of pathways and genomes according to arbitrary sets of design principles. Here we describe a synthetic yeast genome project, Sc2.0, and the first partially synthetic eukaryotic chromosomes, Saccharomyces cerevisiae chromosome synIXR, and semi-synVIL. We defined three design principles for a synthetic genome as follows: first, it should result in a (near) wild-type phenotype and fitness; second, it should lack destabilizing elements such as tRNA genes or transposons (8,9); and third, it should have genetic flexibility to facilitate future studies. The synthetic genome features several systemic modifications complying with the design principles, including an inducible evolution system, SCRaMbLE (synthetic chromosome rearrangement and modification by loxP-mediated evolution). We show the utility of SCRaMbLE as a novel method of combinatorial mutagenesis, capable of generating complex genotypes and a broad variety of phenotypes. When complete, the fully synthetic genome will allow massive restructuring of the yeast genome, and may open the door to a new type of combinatorial genetics based entirely on variations in gene content and copy number., The first phase of any genome engineering project is design (Supplementary Text 1). We designed the right arm of chromosome IX (IXR) according to the three principles outlined above and [...]
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- 2011
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17. Numerical modelling of a Macrotidal Bay over the last 9,000 years: An interdisciplinary methodology to understand the influence of sea-level variations on tidal currents in the Bay of Brest
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Olivier, Matthieu Guillaume, Leroux, Estelle, Rabineau, Marina, Le Hir, Pierre, Granjeon, Didier, Chataigner, Teddy, Beudin, Alexis, Muller, Heloise, Olivier, Matthieu Guillaume, Leroux, Estelle, Rabineau, Marina, Le Hir, Pierre, Granjeon, Didier, Chataigner, Teddy, Beudin, Alexis, and Muller, Heloise
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Estuaries play a major role in the transfer of sediments from the continents to the shelves and deep ocean basins. Their position at the interface between land and sea promotes them as a key area for the understanding of ocean sediment supply, but yet long-term evolution remains poorly understood. The main reasons of the lack of knowledge about estuaries filling are the lack of hydrodynamic data in the past and the temporal application of numerical models. Oceanographers and geologists have developed numerical models to simulate currents and sedimentation. On one hand, hydro-sediment models allow a good physical representation of estuarine hydrodynamic processes and their impact on sedimentation, but only over time-scale spanning years to decades. On the other hand, stratigraphic diffusive models aim to study the impact of various geological processes on sedimentary basins over millions of years, but they are unable to describe in detail the tidal hydrodynamic processes that govern estuaries. In response to this timescale issue, this study presents a first step attempt to explore the evolution of tidal current distribution in relation with Holocene eustatic variations and seafloor evolution. Here we focus on a macro-tidal estuary, the bay of Brest, where tidal processes dominate, as the estuary is naturally protected from ocean swells. This paper aims to set up a methodology to simulate the (past) tidal currents over a long time period and correlate them with sedimentary data. Major changes in deposit dynamics are first identified from cores and seismic data, and the corresponding paleo-topographies and paleo-sea-levels are rebuilt. A process-based hydrodynamic model (MARS3D) is then used to test the impacts of these paleo-bathymetries on hydrodynamics over a 1-year time span. Four scenarii have been considered, representing four key stages of the Holocene transgression in the Bay of Brest. The simulated barotropic currents distributions were analysed and bottom cur
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- 2021
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18. Genome evolution in yeasts
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Dujon, Bernard, Sherman, David, Fischer, Gilles, Durrens, Pascal, Casaregola, Serge, Lafontaine, Ingrid, de Montigny, Jacky, Marck, Christian, Neuveglise, Cecile, Talla, Emmanuel, Goffard, Nicolas, Frangeul, Lionel, Aigle, Michel, Anthouard, Veronique, Babour, Anna, Barbe, Valerie, Barnay, Stephanie, Blanchin, Sylvie, Beckerich, Jean-Marie, Beyne, Emmanuelle, Bleykasten, Claudine, Boisrame, Anita, Boyer, Jeanne, Cattolico, Laurence, Confanioleri, Fabrice, de Daruvar, Antoine, Despons, Laurence, Fabre, Emmanuelle, Fairhead, Cecile, Ferry-Dumazet, Helene, Groppi, Alexis, Hantraye, Florence, Hennequin, Christophe, Jauniaux, Nicolas, Joyet, Philippe, Kachouri, Rym, Kerrest, Alix, Koszul, Romain, Lemaire, Marc, Lesur, Isabelle, Ma, Laurence, Muller, Heloise, Nicaud, Jean-Marc, Nikolski, Macha, Oztas, Sophie, Ozier-Kalogeropoulos, Odile, Pellenz, Stefan, Potier, Serge, Richard, Guy-Franck, Straub, Marie-Laure, Suleau, Audrey, Swennen, Dominique, Tekaia, Fredj, Wesolowski-Louvel, Micheline, Westhof, Eric, Wirth, Benedicte, Zeniou-Meyer, Maria, Zivanovic, Ivan, Bolotin-Fukuhara, Monique, Thierry, Agnes, Bouchier, Christiane, Caudron, Bernard, Scarpelli, Claude, Gaillardin, Claude, Weissenbach, Jean, Wincker, Patrick, and Souciet, Jean-Luc
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Environmental issues ,Science and technology ,Zoology and wildlife conservation - Abstract
Author(s): Bernard Dujon (corresponding author) [1]; David Sherman [5, 6]; Gilles Fischer [1]; Pascal Durrens [6, 7]; Serge Casaregola [8]; Ingrid Lafontaine [1]; Jacky de Montigny [9]; Christian Marck [10]; [...]
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- 2004
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19. Workshop to evaluate and test operational assessment of human activities causing physical disturbance and loss to seabed habitats (MSFD D6 C1, C2 and C4) (WKBEDPRES2)
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Boulcott, Philip, Valanko, Sebastian, van Denderen, Pieter Daniël, Abaza, Valeria, Addington, Laura, Bennecke, Swaantje, Brivois, Olivier, Carter, Anita, Connor, David, De Backer, Annelies, Egekvist, Josefine, Franceschini, Gianluca, Hiddink, Jan Geert, Kenny, Andrew, Krawack, Marie Louise, Laamanen, Leena, Middelboe, Anne Lise, Muller, Heloise, Papadopoulou, Nadia, Papathanasiou, Vasillis, Smith, Christopher J., Spinu, Alina, Stolk, Ad, Trabucco, Benedetta, and Van Lancker, Vera
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SDG 14 - Life Below Water - Abstract
ICES was requested to investigate the main physical disturbance pressure(s) causing benthic impact on habitats per EU ecoregion. The three workshops in this process - WKBEDPRES1, WKBEDLOSS and WKBEDPRES2 – form part of a stepwise process that will deliver advice on seafloor integrity for the Marine Strategy Framework Directive (MSFD). In collaboration with its strategic partners, the high level objectives undertaken by ICES within the advice request process were: 1) to identify benthic physical disturbance pressure layers available within ICES and the European and wider marine community across the four EU (MSFD) regions – including the mapping of pertinent data flows and the establishment of criteria needed to ensure the practical use of the data in assessing benthic impact in the workshop WKBEDPRES1 (ICES HQ 24–26 October 2018); 2) to identify physical pressure layers causing loss of benthic habitats across the four EU regions, including mapping of data flow and establish guidance to ensure the practical use of the data in assessing benthic impact in the workshop WKBEDLOSS (ICES HQ 11–13 March 2019); 3) to collate physical pressure layer data causing loss or disturbance (October 2018–Aug 2019), using identified sources and targeted data calls; and 4) to evaluate and operationally test the application of compiled physical pressure layer data causing loss or disturbance (WKBEDPRES2, 30 September–2 October 2019). WKBEDPRES 2 represents the end of this process prior to submission to an ICES coordinated scientific peer-review. During this ICES review phase the EU’s TG SeaBed group will also be given the opportunity to highlight any issues requiring further clarification, and input on the operational implementation of the suggested approaches. An ICES Advice Drafting Group (ADGD6PRES) will be convened to draft advice in response to the original advice request based on the workshop reports and their review (including TG SeaBed input) to then be approved by the ICES Advisory Committee. The expected release of the ICES advice is 5 December 2019.WKBEDPRES2 focused on objectives 3 and 4 above, developing EU-wide guidance on how to assess and report human activities that cause physical disturbance to the seafloor and loss of benthic habitats and to present relevant methodological flows and demonstration products. Within WKBEDPRES2 suitable data streams relating to activities thought to be the main causes of physical disturbance were identified, as were the links from activity to pressure and then through to impact. To produce an assessment process that allowed an accurate assessment of pressures, whilst at the same time being tractable operationally, key pressures drivers and activities were identified and have been reported herein. Definitions of what constitutes physical disturbance and loss, including further definitions required in their assessment, were also set out. The methodology laid out in WKBEDPRES2 was found to be generally applicable to each ecoregion and pressure type thought to have a main impact upon seabed integrity. The resultant demonstration product confirms the current availability of reliable methods that can implement such an assessment and the data requirements needed to serve such methods. Limitations to this assessment process, in terms of supporting models and data gaps were also identified. The implementation of such methods provides a framework that is able to assess multiple pressures arising from multiple activities and presents the possibility of further activities being included into the assessment framework in a cumulative and biologically relevant manner: appropriate to assessment of adverse effects under D6C3 and D6C5, both for the single pressure and the cumulative of all pressures.
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- 2019
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20. Infragravity waves: from driving mechanisms to impacts
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Proceskunde, Coastal dynamics, Fluvial systems and Global change, Bertin, Xavier, de Bakker, A.T.M., van Dongeren, Ap, Coco, Giovanni, Andre, Gael, Ardhuin, F., Bonneton, P., Bouchette, Frederic, Castelle, B., Crawford, Wayne, Davidson, M., Deen, Martha, Dodet, Guillaume, Guerin, Thomas, Inch, Kris, Leckler, Fabien, McCall, Robert, Muller, Heloise, Olabarrieta, Maintane, Roelvink, Dano, Ruessink, B.G., Sous, Damien, Stutzmann, Eleonore, Tissier, M.F.S., Proceskunde, Coastal dynamics, Fluvial systems and Global change, Bertin, Xavier, de Bakker, A.T.M., van Dongeren, Ap, Coco, Giovanni, Andre, Gael, Ardhuin, F., Bonneton, P., Bouchette, Frederic, Castelle, B., Crawford, Wayne, Davidson, M., Deen, Martha, Dodet, Guillaume, Guerin, Thomas, Inch, Kris, Leckler, Fabien, McCall, Robert, Muller, Heloise, Olabarrieta, Maintane, Roelvink, Dano, Ruessink, B.G., Sous, Damien, Stutzmann, Eleonore, and Tissier, M.F.S.
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- 2018
21. PREVIMER: Improvement of surge, sea level and currents modelling
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Pineau-Guillou, Lucia, Dumas, Franck, Sébastien Theetten, Fabrice Ardhuin, Lecornu, Fabrice, Jean-Francois Le Roux, Idier, Deborah, Muller, Heloise, and Pedreros, Rodrigo
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The pre-operational system PREVIMER provides coastal observations and forecasts along French coasts. It provides, among other variables, currents, sea levels, surges and waves. This paper describes the development and validation of a high temporal (15 minutes) and spatial (250 m) resolution modeling system, based on MARS hydrodynamic model (Lazure and Dumas 2008), along the Atlantic and English Channel coasts. Models benefi t from experiments developed during the PREVIMER project by: (1) taking better into account wind and wave actions (improving surface drag coeffi cient parameterization), (2) taking into account a better meteorological forcing (improving spatial and temporal meteorological resolution). These high resolution models have been integrated in PREVIMER modeling system since 2013.
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- 2014
22. Atmospheric storm surge modeling methodology along the French (Atlantic and English Channel) coast
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Muller, Heloise, Pineau-guillou, Lucia, Idier, Deborah, Ardhuin, Fabrice, Muller, Heloise, Pineau-guillou, Lucia, Idier, Deborah, and Ardhuin, Fabrice
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Storm surge modeling and forecast are the key issues for coastal risk early warning systems. As a general objective, this study aims at improving high-frequency storm surge variations modeling within the PREVIMER system (www.previmer.org), along the French Atlantic and English Channel coasts. The paper focuses on (1) sea surface drag parameterization and (2) uncertainties induced by the meteorological data quality. The modeling is based on the shallow-water version of the model for applications at regional scale (MARS), with a 2-km spatial resolution. The model computes together tide and surge, allowing properly taking into account tide-surge interactions. To select the most appropriate parameterization for the study area, a sensitivity analysis on sea surface drag parameterizations is done, based on comparisons of modeled storm surges (extracted with a tidal component analysis) with four tidal gauges, during four storm events, and over about 7.5 years, where the observed water level is processed in the same way as the modeling results. The tested drag parameterizations are a constant one, as reported by Moon et al. (J Atmos Sci 61: 2321–2333, 2007), Makin (Bound-Layer Meteorol 115: 169–176, 2005), and Charnock (J Roy Meteor Soc 81: 639–640, 1955). Charnock’s parameterization, either constant with high value (0.022) or relying on a full statistical description of the sea state, enables to improve storm surges forecast with peak errors 10 cm smaller than those computed with the other drag coefficient formulations. The impact of the meteorological forcing quality is evaluated over January 2012 from the comparison between surges modeled with different meteorological data (ARPEGE, ARPEGE High Resolution and AROME) and observations. For event time scale, storm surge computation is highly improved with ARPEGE High Resolution data. For month time scale, statistics of model accuracy are less sensitive to the choice of meteorological forcing. As a conclusion, the Charnock’s
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- 2014
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23. Tide-surge interaction in the English Channel
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Idier, Deborah, Dumas, Franck, Muller, Heloise, Idier, Deborah, Dumas, Franck, and Muller, Heloise
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The English Channel is characterised by strong tidal currents and a wide tidal range, such that their influence on surges is expected to be non-negligible. In order to better assess storm surges in this zone, tide-surge interactions are investigated. A preliminary data analysis on hourly surges indicates some preferential times of occurrence of large storm surges at rising tide, especially in Dunkerque. To examine this further, a numerical modelling approach is chosen, based on the 2DH shallow-water model (MARS). The surges are computed both with and without tide interaction. For the two selected events (the November 2007 North Sea and March 2008 Atlantic storms), it appears that the instantaneous tide-surge interaction is seen to be non-negligible in the eastern half of the English Channel, reaching values of 74 cm (i.e. 50% of the same event maximal storm surge) in the Dover Strait for the studied cases. This interaction decreases in westerly direction. In the risk-analysis community in France, extreme water levels have been determined assuming skew surges and tide as independent. The same hydrodynamic model is used to investigate this dependence in the English Channel. Simple computations are performed with the same meteorological forcing, while varying the tidal amplitude, and the skew surge differences D-SS are analysed. Skew surges appear to be tide-dependent, with negligible values of DSS (<0.05 m) over a large portion of the English Channel, although reaching several tens of centimetres in some locations (e. g. the Isle of Wight and Dover Strait).
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- 2012
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24. Identification of typical scenarios for the surface Lagrangian residual circulation in the Iroise Sea
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Muller, Heloise, Blanke, Bruno, Dumas, Franck, Mariette, Vincent, Muller, Heloise, Blanke, Bruno, Dumas, Franck, and Mariette, Vincent
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This paper describes the surface Lagrangian residual circulation (LRC) over 2.5 day intervals in the Iroise Sea, west of France, and evaluates, for operational purposes, the influence of the different physical mechanisms that govern it. The method consists of the calculation of water displacements with a diagnostic Lagrangian tool that computes the trajectories of numerical particles in a given velocity field. The LRC is inferred from trajectories integrated over five M2 tidal cycles. The analysis is applied to both gridded genuine current measurements and ocean model outputs: the sea surface currents are derived from high-frequency (HF) radar measurements and from MARS, a 3-D regional ocean model used here in idealized configurations. To substantiate the analysis, the Lagrangian residual currents are also compared to genuine movements of drifters released in the Iroise Sea in 2005 and 2007. The LRC is mapped for typical scenarios identified from the Lagrangian analysis of HF radar surface currents measured in winter and summer, under weak (<7 m/s) and strong (>10 m/s) wind conditions, and in neap tide and spring tide seasons. Idealized numerical simulations that switch on and off each individual physical process are used to isolate in the LRC the patterns induced by the atmospheric forcing, tides, and density-driven currents.
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- 2010
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25. Etude de la circulation résiduelle lagrangienne en mer d'Iroise
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Muller, Heloise and Muller, Heloise
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The aim of this work is to assess the lagrangian residual circulation in the Iroise sea and to evaluate the relative contribution of the different physical processes at play. We calculate water displacements with a diagnostic lagrangian tool that computes the full trajectories of Active particles advected in a given velocity field. The lagrangian residual circulation is inferred from trajectories integrated over an appropriate period. This analysis is applied both to ocean model ouputs and genuine, gridded current measurements. These two sources of data are indeed complementary to study the lagrangian residual circulation according to the impact of the physical processes at play. We used sea surface currents measured by HF radars and surface currents computed with a 3D ocean model, forced by high resolution meteorological data from an atmospheric model. The lagrangian residual currents are compared to genuine movements of drifters. Our analyses and diagnoses provide a realistic description of the lagrangian residual circulation in the Iroise sea and evaluate the influence of the different driving mechanisms that govern it. We determine the contribution of tides, wind and density gradients by analysing HF radars surface currents during winter and summer, weak and strong wind conditions. idealized numerical simulations that switch on and off each individual physical processes help us refine our conclusions. To exploit this process study in terms of operational oceanography, we draw maps of the lagrangian residual circulation over five M2 tidal cycles in the Iroise sea. We provide representative samples of various meteorological and oceanic situations., La mer d'Iroise est une zone particulière qui possède une structure hydrologique et un hydrodynamisme singuliers. Les forts courants de marée dont elle est le siège participent en été a la création de fronts thermiques. Ces zones frontales permettent le développement d'une activité biologique intense. Par ailleurs, la zone Iroise se distingue par un trafic maritime très dense. Que ce soit en termes de prévention ou en temps de crise, il est essentiel de comprendre la circulation résiduelle lagrangienne dans la zone. Cette compréhension repose sur l'évaluation des contributions respectives des différents mécanismes physiques (la marée, le vent et les gradients de densité) à cette circulation résiduelle lagrangienne. La cartographie de la circulation résiduelle lagrangienne de la zone a été étudiée selon trois angles d'approche complémentaires. Les deux premiers consistent à calculer les courants résiduels lagrangiens sur un nombre fini de cycles de l'onde de marée M2 grâce à l'utilisation d'une méthode numérique de suivi de particules advectées dans des champs de courant de surface mesures par radar HF ou simulés avec un modèle d'océan. La troisième approche est une analyse fine des trajectoires suivies par des bouées dérivantes lâchées dans la zone. Afin d'obtenir des résultats pertinents, une modélisation haute résolution de la mer d'Iroise a été mise en place, suivie par le développement d'une méthodologie de calcul des courants résiduels lagrangien de la zone à partir de n'importe quels champs de courant instantanés grilles et enfin par la description de la circulation résiduelle lagrangienne de la zone basée sur l'identification de scénarios types.
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- 2008
26. High-resolution atmospheric forcing for regional oceanic model: the Iroise Sea
- Author
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Muller, Heloise, Dumas, Franck, Blanke, Bruno, Mariette, Vincent, Muller, Heloise, Dumas, Franck, Blanke, Bruno, and Mariette, Vincent
- Abstract
This study was aimed at modeling, as realistically as possible, the dynamics and thermodynamics of the Iroise Sea by using the Model for Applications at Regional Scale (MARS), a regional ocean 3D model. The horizontal resolution of the configuration in use is 2 km with 30 vertical levels. The 3D model of the Iroise Sea is embedded in a larger model providing open boundary conditions. As regards the atmospheric forcing, the originality of this study is to force the regional ocean model with the high-resolution (6 km) regional meteorological model, Weather Research and Forecasting (WRF). In addition, as the air surface temperature is highly sensitive to the sea surface temperature (SST), this regional meteorological model is improved by taking into account a regional climatologic SST to compute meteorological parameters. By allowing a better coherence between the SST and the temperature of the atmospheric boundary layer while giving a more realistic representation of heat fluxes exchanged at the air/sea interface, this forcing constitutes a noticeable improvement of the Iroise Sea modeling. The different sensitivity tests discussed here pinpoint the importance of entering, in WRF, SST data of sufficiently high quality before the computation of meteorological forcing when the aim is a study of dynamics and thermodynamics far away from the coast. On the other hand, when the target is the reproduction of coastal small-scale features in Iroise Sea modeling, the resolution of the meteorological forcing and the quality of SST are both paramount. The simulation of reference was carried out throughout the Summer and Autumn of year 2005 to allow comparisons with a campaign of surface current measurements by high-frequency radars conducted at the same period.
- Published
- 2007
- Full Text
- View/download PDF
27. Estimating Lagrangian Residual Circulation (LRC) in the Iroise Sea
- Author
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Petersen, Leif, primary, Muller, Heloise, additional, and Mariette, Vincent, additional
- Published
- 2008
- Full Text
- View/download PDF
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