107 results on '"Nakamachi, Y."'
Search Results
2. Activation-induced cytidine deaminase expression in follicular lymphoma: association between AID expression and ongoing mutation in FL
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Hardianti, M S, Tatsumi, E, Syampurnawati, M, Furuta, K, Saigo, K, Nakamachi, Y, Kumagai, S, Ohno, H, Tanabe, S, Uchida, M, and Yasuda, N
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- 2004
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3. Hospital outbreak of MEN-1-derived extended spectrum β-lactamase-producing Klebsiella pneumoniae
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Komatsu, M., Ikeda, N., Aihara, M., Nakamachi, Y., Kinoshita, S., Yamasaki, K., and Shimakawa, K.
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- 2001
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4. Quantitative nested reverse transcriptase PCR vs. real-time PCR for measuring AML1/ETO (MTG8) transcripts
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TAKENOKUCHI, M., YASUDA, C., TAKEUCHI, K., NAKAMACHI, Y., MUKAI, M., KONDO, S., KUMAGAI, S., SAIGO, K., MURAYAMA, T., KOIZUMI, T., and TATSUMI, E.
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- 2004
5. PIN49 EXAMINING THE CLINICAL AND ECONOMIC IMPACT OF ANTIMICROBIAL RESISTANCE AT ACUTE CARE FACILITIES: A PRACTICAL TOOL
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Smallwood, C., primary, Gala, S., additional, Chandran, A., additional, Nakamachi, Y., additional, and Morris, A., additional
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- 2019
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6. 531 Identification of a heterozygous p.Gly568Val missense mutation in the TRPV3 gene in a patient with Olmsted syndrome: In silico analysis of TRPV3
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Nagai, H., primary, Takaoka, Y., additional, Sugano, A., additional, Nakamachi, Y., additional, Kawano, S., additional, and Nishigori, C., additional
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- 2017
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7. Epidermolysis bullosa simplex with mottled pigmentation with noncicatricial alopecia: identification of a recurrent p.P25L mutation inKRT5in four affected family members
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Nagai, H., primary, Oiso, N., additional, Tomida, S., additional, Sakai, K., additional, Fujiwara, S., additional, Nakamachi, Y., additional, Kawano, S., additional, Kawada, A., additional, Nishio, K., additional, and Nishigori, C., additional
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- 2016
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8. Élaboration et renforcement de la gestion des antimicrobiens en milieu hospitalier : L'expérience ontarienne
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Nakamachi, Y, primary, West, S, additional, Dresser, L, additional, and Morris, AM, additional
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- 2015
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9. Developing and expanding hospital antimicrobial stewardship: The Ontario experience
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Nakamachi, Y, primary, West, S, additional, Dresser, L, additional, and Morris, AM, additional
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- 2015
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10. THU0076 Microrna-124 Inhibits Progression of Adjuvant-Induced Arthritis in Rats
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Nakamachi, Y., primary, Ohnuma, K., additional, Uto, K., additional, Noguchi, Y., additional, Saegusa, J., additional, and Kawano, S., additional
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- 2015
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11. Gun Bullet Collision and Penetration Problem in Polycarbonate Board
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Gotoh, K., primary, Sakamoto, Hidetoshi, additional, Ohbuchi, Y., additional, Katayama, T., additional, Nakamachi, Y., additional, and Ando, H., additional
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- 2014
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12. miR-124a as a key regulator of proliferation and MCP-1 secretion in synoviocytes from patients with rheumatoid arthritis
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Kawano, S., primary and Nakamachi, Y., additional
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- 2011
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13. Troglitazone Inhibits Cell Growth and Induces Apoptosis of B-Cell Acute Lymphoblastic Leukemia Cells with t(14;18)
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Takenokuchi, M., primary, Saigo, K., additional, Nakamachi, Y., additional, Kawano, S., additional, Hashimoto, M., additional, Fujioka, T., additional, Koizumi, T., additional, Tatsumi, E., additional, and Kumagai, S., additional
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- 2006
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14. Modification of Cytokine Milieu by A2A Adenosine Receptor Signaling?Possible Application for Inflammatory Diseases
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Koshiba, M., primary, Nakamachi, Y., additional, Kosaka, H., additional, Nakazawa, T., additional, Tsuji, G., additional, and Kumagai, S., additional
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- 2005
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15. Modification of Cytokine Milieu by A2AAdenosine Receptor Signaling–Possible Application for Inflammatory Diseases
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Koshiba, M., primary, Nakamachi, Y., additional, Kosaka, H., additional, Nakazawa, T., additional, Tsuji, G., additional, and Kumagai, S., additional
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- 2004
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16. Protein Synthesis Is Required for the Generation of Oscillatory Current Responses in Xenopus Oocyte
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Nakamachi, Y., primary and Ando, H., additional
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- 1994
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17. Quantitative detection of PML-RARalpha fusion transcript by real-time PCR with a single primer pair.
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Takenokuchi M, Nakamachi Y, Yoneda K, Joo K, Kawano S, Tatsumi E, Saigo K, Kumagai S, Takenokuchi, Mariko, Nakamachi, Yuji, Yoneda, Keiko, Joo, Kana, Kawano, Seiji, Tatsumi, Eiji, Saigo, Katsuyasu, and Kumagai, Shunichi
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- 2009
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18. Modification of Cytokine Milieu by A2A Adenosine Receptor Signaling–Possible Application for Inflammatory Diseases.
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Koshiba, M., Nakamachi, Y., Kosaka, H., Nakazawa, T., Tsuji, G., and Kumagai, S.
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- *
CYTOKINES , *ADENOSINES , *DISEASES , *PURINERGIC receptors , *TUMOR necrosis factors - Abstract
Pro-inflammatory cytokine TNF-alpha(TNF) production from in vitro lipopolysaccharide(LPS)-stimulated human peripheral blood CD14+ cells(PB-CD14) was inhibited by A2A adenosine receptor(AdoR)(A2AR) orß2 adrenergic receptor(ADR)(ß2R) signaling in a concentration-dependent manner. These inhibitory effects were presumably mediated by the increase in intracellular cAMP. Furthermore A2AR agonist andß2R agonist synergistically inhibited the TNF production of LPS-stimulated PB-CD14 cells. These results suggest that the anti-inflammatory effect of extracellular adenosine is, at least in part, due to the modification of the cytokine milieu via A2A signaling, and that the targeting of both A2AR andß2R may have strong therapeutic potential for the inflammatory diseases. [ABSTRACT FROM AUTHOR]
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- 2004
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19. 531 Identification of a heterozygous p.Gly568Val missense mutation in the TRPV3gene in a patient with Olmsted syndrome: In silicoanalysis of TRPV3
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Nagai, H., Takaoka, Y., Sugano, A., Nakamachi, Y., Kawano, S., and Nishigori, C.
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- 2017
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20. Modification of Cytokine Milieu by A2A Adenosine Receptor Signaling-Possible Application for Inflammatory Diseases.
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Koshiba, M., Nakamachi, Y., Kosaka, H., Nakazawa, T., Tsuji, G., and Kumagai, S.
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- 2005
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21. Oguchi disease with sectoral retinitis pigmentosa harboring adenine deletion at position 1147 in the arrestin gene
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Nakamachi, Y., Nakamura, M., Fujii, S., Yamamoto, M., and Okubo, K.
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- 1998
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22. Modification of Cytokine Milieu by A2AAdenosine Receptor Signaling—Possible Application for Inflammatory Diseases
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Koshiba, M., Nakamachi, Y., Kosaka, H., Nakazawa, T., Tsuji, G., and Kumagai, S.
- Abstract
For Abstract see ChemInform Abstract in Full Text.
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- 2005
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23. Preparation of natural high-mannose-type oligosaccharides (Glc 1 Man 9 GlcNAc 2 ) with the asparagine-glycine-threonine as consensus sequence from chicken egg yolk.
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Hirose M, Nakamachi Y, Muto H, Taira A, Tanaka S, Kuribara T, and Totani K
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- Animals, Asparagine chemistry, Mannose chemistry, Threonine chemistry, Consensus Sequence, Glycine chemistry, Glycopeptides chemistry, Chickens, Egg Yolk chemistry, Oligosaccharides chemistry, Oligosaccharides chemical synthesis
- Abstract
High-mannose-type glycan structure of N-glycoproteins plays important roles in the proper folding of proteins in sorting glycoprotein secretion and degradation of misfolded proteins in the endoplasmic reticulum (ER). The Glc
1 Man9 GlcNAc2 (G1M9)-type N-glycan is one of the most important signaling molecules in the ER. However, current chemical synthesis strategies are laborious, warranting more practical approaches for G1M9-glycopeptide development. Wang et al. reported the procedure to give G1M9-Asn-Fmoc through chemical modifications and purifications from 40 chicken eggs, but only 3.3 mg of G1M9-glycopeptide was obtained. Therefore, better methods are needed to obtain more than 10 mg of G1M9-glycopeptide. In this study, we report the preparation of G1M9-glycopeptide (13.2 mg) linking Asn-Gly-Thr triad as consensus sequence from 40 chicken eggs. In this procedure, λ-carrageenan treatment followed by papain treatment was used to separate the Fc region of IgY antibody that harbors high-mannose glycans. Moreover, cotton hydrophilic interaction liquid chromatography was adapted for easy purification. The resulting G1M9-Asn(Fmoc)-Gly-Thr was identified by nuclear magnetic resonance and mass spectroscopy. G1M9-Asn(Fmoc)-Gly, G1M9-Asn(Fmoc), and G1M9-OH were also detected by mass spectroscopy. Here, our developed G1M9-tripeptide might be useful for the elucidation of glycoprotein functions as well as the specific roles of the consensus sequence., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Yuto Nakamachi, Shinji Tanaka, Taiki Kuribara, Kiichiro Totani has patent #P7261366 issued to KH Neochem Co. Ltd. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Ltd. All rights reserved.)- Published
- 2024
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24. Management of infectious disease syndromes in thoracic organ transplants and mechanical circulatory device recipients: a Delphi panel.
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Luong ML, Nakamachi Y, Silveira FP, Morrissey CO, Danziger-Isakov L, Verschuuren EAM, Wolfe CR, Hadjiliadis D, Chambers DC, Patel JK, Dellgren G, So M, Verleden GM, Blumberg EA, Vos R, Perch M, Holm AM, Mueller NJ, Chaparro C, and Husain S
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- Humans, Surveys and Questionnaires, Heart-Assist Devices adverse effects, Consensus, Invasive Pulmonary Aspergillosis drug therapy, Mycobacterium Infections, Nontuberculous, Transplant Recipients, Lung Transplantation adverse effects, Anti-Bacterial Agents therapeutic use, Communicable Diseases, Delphi Technique
- Abstract
Purpose: Antimicrobial misuse contributes to antimicrobial resistance in thoracic transplant (TTx) and mechanical circulatory support (MCS) recipients. This study uses a modified Delphi method to define the expected appropriate antimicrobial prescribing for the common clinical scenarios encountered in TTx and MCS recipients., Methods: An online questionnaire on managing 10 common infectious disease syndromes was submitted to a multidisciplinary Delphi panel of 25 experts from various disciplines. Consensus was predefined as 80% agreement for each question. Questions where consensus was not achieved were discussed during live virtual live sessions adapted by an independent process expert., Results: An online survey of 62 questions related to 10 infectious disease syndromes was submitted to the Delphi panel. In the first round of the online questionnaire, consensus on antimicrobial management was reached by 6.5% (4/62). In Round 2 online live discussion, the remaining 58 questions were discussed among the Delphi Panel members using a virtual meeting platform. Consensus was reached among 62% (36/58) of questions. Agreement was not reached regarding the antimicrobial management of the following six clinical syndromes: (1) Burkholderia cepacia pneumonia (duration of therapy); (2) Mycobacterium abscessus (intra-operative antimicrobials); (3) invasive aspergillosis (treatment of culture-negative but positive BAL galactomannan) (duration of therapy); (4) respiratory syncytial virus (duration of antiviral therapy); (5) left ventricular assist device deep infection (initial empirical antimicrobial coverage) and (6) CMV (duration of secondary prophylaxis)., Conclusion: This Delphi panel developed consensus-based recommendations for 10 infectious clinical syndromes seen in TTx and MCS recipients., (© 2024 Wiley Periodicals LLC.)
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- 2024
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25. Exosomes derived from synovial fibroblasts from patients with rheumatoid arthritis promote macrophage migration that can be suppressed by miR-124-3p.
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Nakamachi Y, Uto K, Hayashi S, Okano T, Morinobu A, Kuroda R, Kawano S, and Saegusa J
- Abstract
Objectives: Exosomes are potent vehicles for intercellular communication. Rheumatoid arthritis (RA) is a chronic systemic disease of unknown etiology. Local administration of miR-124 precursor to rats with adjuvant-induced arthritis suppresses systemic arthritis and bone destruction. Thus, exosomes may be involved in this disease. We aimed to determine the role of exosomes in the pathology of RA., Methods: Fibroblast-like synoviocytes (FLS) were collected from patients with RA and osteoarthritis (OA). miR-124-3p mimic was transfected into the RA FLS (RA miR-124 FLS). Exosomes were collected from the culture medium by ultracentrifugation. Macrophages were produced from THP-1 cells. MicroRNAs in the exosomes were analyzed using real-time PCR. Proteomics analysis was performed using nanoscale liquid chromatography-tandem mass spectrometry. Macrophage migration was evaluated using a Transwell migration assay. SiRNA was used to knockdown proteins of interest., Results: MicroRNAs in the RA FLS, RA miR-124 FLS, and OA FLS exosomes were similar. Proteomics analysis revealed that pentraxin 3 (PTX3) levels were higher in RA FLS exosomes than in RA miR-124 FLS and OA FLS exosomes, and proteasome 20S subunit beta 5 (PSMB5) levels were lower in RA FLS exosomes than in RA miR-124 FLS and OA FLS exosomes. The RA FLS exosomes promoted and the RA miR-124 FLS exosomes suppressed macrophage migration. PTX3-silenced RA FLS exosomes suppressed and PSMB5-silenced OA FLS exosomes promoted macrophage migration., Conclusions: RA FLS exosomes promote macrophage migration via PTX3 and PSMB5, and miR-124-3p suppresses this migration., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2023 The Authors.)
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- 2023
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26. Auditing tools for antimicrobial prescribing in solid organ transplant recipients: The why, the how, and an assessment of current options.
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So M, Nakamachi Y, and Thursky K
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- Humans, Antimicrobial Stewardship, Hospitals, Transplant Recipients, Anti-Bacterial Agents therapeutic use, Anti-Infective Agents therapeutic use, Organ Transplantation adverse effects
- Abstract
Background: Antimicrobial stewardship (AMS) aims to optimize antimicrobial use. Auditing and reporting of antimicrobial prescribing are essential. Auditing tools for solid organ transplant (SOT) patients should tailor to their needs., Methods: We reviewed published data describing auditing tools in the general and SOT population., Results: We focused on three internationally or nationally available auditing tools. The National Antimicrobial Prescribing Survey (NAPS) is web-based tool to report antimicrobial consumption and assess appropriateness using standardized definitions based on consensus guidelines. In the absence of guidelines, adjudication is based on AMS principles. An automated dashboard, analyses by indication or antimicrobial, and benchmarking reports are available. The National Healthcare Safety Network Antimicrobial Use/Resistance module was developed by the Centers for Disease Control and Prevention for hospitals to upload monthly data, which are standardized for benchmarking. It does not assess appropriateness or address SOT wards. The Global-Point Prevalence Survey from bioMérieux collects data on antimicrobial regimen, indication and microbial resistance. Variables unique to SOT include comorbidities and devices. Assessment of appropriateness is limited to guideline adherence, and benchmarking may require prearrangement with bioMérieux. Benchmarking requires prearrangement. Advances in electronic health record systems and clinical decision support tools can improve the efficiency of the auditing process., Conclusion: Each AMS auditing tool has unique features for SOT patients. Capturing immunosuppression, source control, organ dysfunction, donor-derived infection, serology, and colonization status will enhance their applicability., (© 2022 Wiley Periodicals LLC.)
- Published
- 2022
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27. Comparison of 17 serological treponemal and nontreponemal assays for syphilis: A retrospective cohort study.
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Sato I, Nakamachi Y, Ohji G, Yano Y, and Saegusa J
- Abstract
Objectives: Rapid plasma reagin (RPR) and Treponema pallidum (TP) antibody test kits are often used to diagnose syphilis, although the relationship between their measured values is unclear. We aimed to reveal the relevance of these kits' results., Design and Methods: In all, 143 sera from 110 patients were tested using 12 TP kits and 5 RPR kits and the results compared., Results: The specificity and sensitivity of RPR kits were 81-96% and 95-100%, respectively. The correlation coefficients (0.849-0.934) considerably differed between the manual RPR card test and latex agglutination (LA) assay kits. The following sensitivities were obtained: 82-91% for TP fluorescent treponemal antibody absorption assay (FTA-ABS), TP hemagglutination assay (HA), and TP particle agglutination assay (PA); 94-95% for TP LAs; and 92-100% for chemiluminescent immunoassay (CLIA), chemiluminescent enzyme immunoassay (CLEIA), and immunochromatography assay (IC). Correlation coefficients between TP kits were 0.753-0.974, and the measured values varied. Changes in RPR and quantifiable TP kits were the same for patients with reinfected syphilis and with syphilis under treatment., Conclusions: RPR tests had lower specificity than TP antibody tests. RPR card test and RPR LAs had similar specificity and sensitivity, but their measured values were different. RPR should be measured using automatic RPR LA without setting the upper limit of the reported value. RPR LA should also be standardized. The sensitivity of TP antibody was better in CLIA, CLEIA, and IC than in FTA-ABS, HA, PA, and LA. Therefore, TP antibody kits should be standardized and quantified., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2022 The Authors.)
- Published
- 2022
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28. Knowledge, perspectives and health outcome expectations of antibiotic therapy in hospitalized patients.
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Jorgoni L, Camardo E, Jeffs L, Nakamachi Y, Somanader D, Bell CM, and Morris AM
- Abstract
Background: The World Health Organization (WHO) has recognized antimicrobial resistance (AMR) as a top threat to global health. However, the public has an incomplete understanding of AMR and its consequences., Aim: The aim of this study was to explore patients' understanding, perspective and health outcome expectations for antibiotic therapy within an inpatient internal medicine population., Methods: A mixed methods study, combining a cross-sectional survey with qualitative methods. Fourteen questions (10 paper survey and four open ended interview questions) were used, and were completed by the participant in one sitting. Participants were recruited from General Internal Medicine units at two academic hospitals in Canada (convenience sample)., Findings: Thirty participants were included. Out of a scale of 1-100%, participants indicated moderate concern (mean of 40%) about getting an infection that could not be cured by antibiotics. The majority agreed that they trusted their healthcare team to decide on appropriate antibiotic therapy (mean of 81%). The participants strongly agreed (mean of 90%) that it was important to understand the rationale for their antibiotic therapy . Three themes emerged from the qualitative analysis: 1) varying levels of knowledge; 2) viewing antibiotics as beneficial while emphasizing effectiveness; and 3) trusting the healthcare team with expectations for inclusion in decision making., Conclusion: The study results showed varying levels of patients' antibiotic knowledge and large gaps in awareness related to AMR. Exploring the role and workflow of interdisciplinary healthcare professionals may be a potential strategy to minimize patients' knowledge gap related to antimicrobial therapy and AMR., (© 2022 The Authors.)
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- 2022
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29. Identification of plexin D1 on circulating extracellular vesicles as a potential biomarker of polymyositis and dermatomyositis.
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Uto K, Ueda K, Okano T, Akashi K, Takahashi S, Nakamachi Y, Imanishi T, Awano H, Morinobu A, Kawano S, and Saegusa J
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- Biomarkers, Cell Adhesion Molecules, Humans, Intracellular Signaling Peptides and Proteins, Membrane Glycoproteins, Membrane Proteins, Nerve Tissue Proteins, Dermatomyositis, Extracellular Vesicles metabolism, Lupus Erythematosus, Systemic diagnosis, Polymyositis diagnosis, Polymyositis metabolism
- Abstract
Objectives: We aimed to identify disease-specific surface proteins on extracellular vesicles (EVs) as novel serum biomarkers of PM/DM., Methods: We performed liquid chromatography-tandem mass spectrometry (LC/MS) on purified EVs from sera of 10 PM/DM patients, 23 patients with other autoimmune diseases and 10 healthy controls (HCs). We identified membrane proteins preferentially present in EVs of PM/DM patients by bioinformatics and biostatistical analyses. We developed an EV sandwich ELISA for directly detecting serum EVs expressing disease-specific membrane proteins and evaluated their clinical utility using sera from 54 PM/DM, 24 RA, 20 SLE, 13 SSc and 25 Duchenne and Becker types of muscular dystrophy (DMD/BMD) patients and 36 HCs., Results: LC/MS analysis identified 1220 proteins in serum EVs. Of these, plexin D1 was enriched in those from PM/DM patients relative to HCs or patients without PM/DM. Using a specific EV sandwich ELISA, we found that levels of plexin D1+ EVs in serum were significantly greater in PM/DM patients than in HCs or RA, SLE or DMD/BMD patients. Serum levels of plexin D1+ EVs were greater in those PM/DM patients with muscle pain or weakness. Serum levels of plexin D1+ EVs were significantly correlated with levels of aldolase (rs = 0.481), white blood cells (rs = 0.381), neutrophils (rs = 0.450) and platelets (rs = 0.408) in PM/DM patients. Finally, serum levels of plexin D1+ EVs decreased significantly in patients with PM/DM in clinical remission after treatment., Conclusion: We identified levels of circulating plexin D1+ EVs as a novel serum biomarker for PM/DM., (© The Author(s) 2021. Published by Oxford University Press on behalf of the British Society for Rheumatology. All rights reserved. For permissions, please email: journals.permissions@oup.com.)
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- 2022
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30. The feasibility and generalizability of assessing the appropriateness of antimicrobial prescribing in hospitals: a review of the Australian National Antimicrobial Prescribing Survey.
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James R, Nakamachi Y, Morris A, So M, Ponnampalavanar SSS, Chuki P, Loong LS, Lai PSM, Chen C, Ingram R, Rajkhowa A, Buising K, and Thursky K
- Abstract
The National Antimicrobial Prescribing Survey (NAPS) is a web-based qualitative auditing platform that provides a standardized and validated tool to assist hospitals in assessing the appropriateness of antimicrobial prescribing practices. Since its release in 2013, the NAPS has been adopted by all hospital types within Australia, including public and private facilities, and supports them in meeting the national standards for accreditation. Hospitals can generate real-time reports to assist with local antimicrobial stewardship (AMS) activities and interventions. De-identified aggregate data from the NAPS are also submitted to the Antimicrobial Use and Resistance in Australia surveillance system, for national reporting purposes, and to strengthen national AMS strategies. With the successful implementation of the programme within Australia, the NAPS has now been adopted by countries with both well-resourced and resource-limited healthcare systems. We provide here a narrative review describing the experience of users utilizing the NAPS programme in Canada, Malaysia and Bhutan. We highlight the key barriers and facilitators to implementation and demonstrate that the NAPS methodology is feasible, generalizable and translatable to various settings and able to assist in initiatives to optimize the use of antimicrobials., (© The Author(s) 2022. Published by Oxford University Press on behalf of British Society for Antimicrobial Chemotherapy.)
- Published
- 2022
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31. Genetic Analysis of UGT1A1 Polymorphisms Using Preserved Dried Umbilical Cord for Assessing the Potential of Neonatal Jaundice as a Risk Factor for Autism Spectrum Disorder in Children.
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Horinouchi T, Maeyama K, Nagai M, Mizobuchi M, Takagi Y, Okada Y, Kato T, Nishimura M, Kawasaki Y, Yoshioka M, Takada S, Matsumoto H, Nakamachi Y, Saegusa J, Fukushima S, Fujioka K, Tomioka K, Nagase H, Nozu K, Iijima K, and Nishimura N
- Subjects
- Child, Female, Humans, Infant, Newborn, Polymorphism, Genetic, Pregnancy, Risk Factors, Umbilical Cord, Autism Spectrum Disorder diagnosis, Autism Spectrum Disorder genetics, Glucuronosyltransferase genetics, Jaundice, Neonatal complications
- Abstract
Neonatal jaundice has been suggested as a perinatal risk factor for autism spectrum disorder (ASD). We examined UGT1A1 polymorphisms to assess the potential of neonatal jaundice as a risk factor for ASD in children by using DNA extracted from preserved umbilical cord. In total, 79 children with ASD were genotyped for UGT1A1*28 (c.-41-40dup), UGT1A1*6 (c.211 G > A), and UGT1A1*27 (c.686 C > A). The allele frequency of UGT1A1*6 (OR = 1.34, p = 0.26) and UGT1A1*28 (OR = 0.80, p = 0.54) and the prevalence of UGT1A1*28/*6 diplotypes did not differ significantly from those in the control population. No UGT1A1*27 allele was detected in the subjects. ASD symptom assessment scores were not associated with UGT1A1*28/*6/*27 genotypes or UGT1A1*28/*6 diplotypes. These results suggest that neonatal jaundice is not significantly associated with ASD., (© 2021. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
- Published
- 2022
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32. A pragmatic randomized trial of a primary care antimicrobial stewardship intervention in Ontario, Canada.
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McIsaac W, Kukan S, Huszti E, Szadkowski L, O'Neill B, Virani S, Ivers N, Lall R, Toor N, Shah M, Alvi R, Bhatt A, Nakamachi Y, and Morris AM
- Subjects
- Adult, Anti-Bacterial Agents therapeutic use, Humans, Ontario, Practice Patterns, Physicians', Primary Health Care, Antimicrobial Stewardship, Respiratory Tract Infections drug therapy
- Abstract
Background: More than 90% of antibiotics are prescribed in primary care, but 50% may be unnecessary. Reducing unnecessary antibiotic overuse is needed to limit antimicrobial resistance. We conducted a pragmatic trial of a primary care provider-focused antimicrobial stewardship intervention to reduce antibiotic prescriptions in primary care., Methods: Primary care practitioners from six primary care clinics in Toronto, Ontario were assigned to intervention or control groups to evaluate the effectiveness of a multi-faceted intervention for reducing antibiotic prescriptions to adults with respiratory and urinary tract infections. The intervention included provider education, clinical decision aids, and audit and feedback of antibiotic prescribing. The primary outcome was total antibiotic prescriptions for these infections. Secondary outcomes were delayed prescriptions, prescriptions longer than 7 days, recommended antibiotic use, and outcomes for individual infections. Generalized estimating equations were used to estimate treatment effects, adjusting for clustering by clinic and baseline differences., Results: There were 1682 encounters involving 54 primary care providers from January until May 31, 2019. In intervention clinics, the odds of any antibiotic prescription was reduced 22% (adjusted Odds Ratio (OR) = 0.78; 95% Confidence Interval (CI) = 0.64.0.96). The odds that a delay in filling a prescription was recommended was increased (adjusted OR=2.29; 95% CI=1.37, 3.83), while prescription durations greater than 7 days were reduced (adjusted OR=0.24; 95% CI=0.13, 0.43). Recommended antibiotic use was similar in control (85.4%) and intervention clinics (91.8%, p=0.37)., Conclusions: A community-based, primary care provider-focused antimicrobial stewardship intervention was associated with a reduced likelihood of antibiotic prescriptions for respiratory and urinary infections, an increase in delayed prescriptions, and reduced prescription durations., Trial Registration: clinicaltrials.gov ( NCT03517215 )., (© 2021. The Author(s).)
- Published
- 2021
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33. Development and evaluation of a primary care antimicrobial stewardship program (PC-ASP) in Toronto, Ontario, Canada.
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McIsaac WJ, Senthinathan A, Moineddin R, Nakamachi Y, Dresser L, McIntyre M, Singh S, De Oliveira N, Tannenbaum D, Bloom J, Lemieux C, Marr P, Levy M, Mitri M, Walji S, Kukan S, and Morris AM
- Abstract
Background: Effective community-based antimicrobial stewardship programs (ASPs) are needed because 90% of antimicrobials are prescribed in the community. A primary care ASP (PC-ASP) was evaluated for its effectiveness in lowering antibiotic prescriptions for six common infections., Methods: A multi-faceted educational program was assessed using a before-and-after design in four primary care clinics from 2015 through 2017. The primary outcome was the difference between control and intervention clinics in total antibiotic prescriptions for six common infections before and after the intervention. Secondary outcomes included changes in condition-specific antibiotic use, delayed antibiotic prescriptions, prescriptions exceeding 7 days duration, use of recommended antibiotics, and emergency department visits or hospitalizations within 30 days. Multi-method models adjusting for demographics, case mix, and clustering by physician were used to estimate treatment effects., Results: Total antibiotic prescriptions in control and intervention clinics did not differ (difference in differences = 1.7%; 95% CI -12.5% to 15.9%), nor did use of delayed prescriptions (-5.2%; 95% CI -24.2% to 13.8%). Prescriptions for longer than 7 days were significantly reduced (-21.3%; 95% CI -42.5% to -0.1%). However, only 781 of 1,777 encounters (44.0%) involved providers who completed the ASP education. Where providers completed the education, delayed prescriptions increased 17.7% ( p = 0.06), and prescriptions exceeding 7 days duration declined (-27%; 95% CI -48.3% to -5.6%). Subsequent emergency department visits and hospitalizations did not increase., Conclusions: PC-ASP effectiveness on antibiotic use was variable. Shorter prescription durations and increased use of delayed prescriptions were adopted by engaged primary care providers., Competing Interests: Linda Dresser reports grants from Merck, Avir, and Sunovion outside of the submitted work., (Copyright © 2021, Association of Medical Microbiology and Infectious Disease Canada (AMMI Canada).)
- Published
- 2021
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34. Lymphoplasmacytic lymphoma in a patient with Birt-Hogg-Dubé syndrome.
- Author
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Kurata K, Matsumoto H, Jimbo N, Yakushijin K, Yamamoto K, Ito M, Nakamachi Y, Matsuoka H, Saegusa J, Seyama K, Itoh T, and Minami H
- Subjects
- Antigens, CD20, Biomarkers, Tumor, Exons genetics, Female, Genetic Predisposition to Disease, Germ-Line Mutation, Humans, Middle Aged, Myeloid Differentiation Factor 88 genetics, Positron Emission Tomography Computed Tomography, Proto-Oncogene Proteins genetics, Syndecan-1, Tumor Suppressor Proteins genetics, Waldenstrom Macroglobulinemia diagnosis, Waldenstrom Macroglobulinemia pathology, Birt-Hogg-Dube Syndrome complications, Birt-Hogg-Dube Syndrome genetics, Waldenstrom Macroglobulinemia etiology, Waldenstrom Macroglobulinemia genetics
- Abstract
Birt-Hogg-Dubé (BHD) syndrome is an autosomal dominant disease characterized by benign skin hamartomas, pulmonary cysts leading to spontaneous pneumothorax, and an increased risk of renal cancer. BHD syndrome is caused by germline mutations in the folliculin (FLCN) gene, a putative tumor suppressor, which result in loss of function of the folliculin protein and may cause cancer predisposition. In a 45-year-old woman with anemia, lymphadenopathy, and a history of recurrent spontaneous pneumothorax,
18 F-FDG PET/CT detected diffuse and slight18 F-FDG accumulation in the bone marrow, enlarged spleen, and systemic multiple enlarged lymph nodes. Genetic examination identified a germline nonsense mutation [c.998C > G (p.Ser333*)] on exon 9 of FLCN. Pathological examination of the lymph node revealed a diffuse neoplastic proliferation of plasmacytoid lymphocytes. The neoplastic lymphoid cells were positive for CD20, CD138, and light chain kappa as per immunohistochemistry and mRNA in situ hybridization, and a MYD88 gene mutation [c.755T > C (p.L252P)] was identified. Accordingly, she was diagnosed with lymphoplasmacytic lymphoma concomitant with BHD syndrome. To the best of our knowledge, this is the first report describing the development of hematological malignancy in a patient with BHD syndrome. The FLCN mutation might contribute lymphomagenesis as an additional mutation cooperating with the MYD88 mutation.- Published
- 2020
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35. Detection of a novel CBFB-MYH11 fusion transcript in acute myeloid leukemia M1 with inv(16)(p13q22).
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Kurata K, Yamamoto K, Okazaki Y, Noguchi Y, Matsui K, Matsumoto H, Inui Y, Yakushijin K, Ito M, Nakamachi Y, Matsuoka H, Saegusa J, and Minami H
- Subjects
- Aged, Antineoplastic Combined Chemotherapy Protocols therapeutic use, Bone Marrow pathology, Female, Humans, Leukemia, Myeloid, Acute diagnosis, Leukemia, Myeloid, Acute drug therapy, Leukemia, Myeloid, Acute pathology, Spectral Karyotyping, Treatment Outcome, Chromosomes, Human, Pair 16 genetics, Gene Rearrangement, Leukemia, Myeloid, Acute genetics, Oncogene Proteins, Fusion genetics
- Abstract
Acute myeloid leukemia (AML) with an inv(16)(p13q22) or t(16;16)(p13;q22) chromosomal abnormality represents one of the most common subtypes of de novo cases. These chromosomal rearrangements result in multiple CBFB-MYH11 fusion transcripts, with type-A being the most frequent. We here describe a unique case of de novo AML-M1, with inv(16)(p13q22), leading to an unusual CBFB-MYH11 fusion transcript, and der(7)t(7;11)(q31;q21). The fusion transcript involves a CBFB exon 5 with a breakpoint at nucleotide 754, an insertion of a 13-bp sequence of CBFB intron 5 at the fusion point, and the MYH11 exon 27 with a breakpoint at nucleotide 3464. To our knowledge, this CBFB-MYH11 fusion transcript has never been reported previously. The clinical characteristics of the present case are in line with previous reports suggesting that rare CBFB-MYH11 fusion transcripts lead to aberrant characteristics such as an atypical cytomorphology and additional cytogenetic abnormalities., Competing Interests: Declaration of Competing Interest Dr. Minami reports grants, personal fees and other from Novartis, during the conduct of the study; grants from Asahi-Kasei Pharma, grants from Astellas, other from AstraZeneca, grants, personal fees and other from Bayer, grants and personal fees from Behringer, grants, personal fees and other from Bristol-Myers Squibb, personal fees from Celgene, grants, personal fees and other from Chugai, grants, personal fees and other from DaiichiSankyo, grants and personal fees from DaiNihonSumitomo, grants and personal fees from Eizai, personal fees from Janssen, personal fees from Kowa, grants and personal fees from Kyowa-Kirin, grants and personal fees from Lilly, grants and personal fees from Merck Serono, grants, personal fees and other from MSD, grants from Nihon Shinyaku, grants and personal fees from Nippon Chemiphar, grants and personal fees from Eizai, grants, personal fees and other from Ono Yakuhin, personal fees from Ohtsuka, grants, personal fees and other from Pfizer, grants and personal fees from Sanofi, personal fees from Shire Japan, grants, personal fees and other from Taiho, grants from Taisho-Toyama, grants and personal fees from Takeda, grants from Teijin Pharma, grants from Yakult, personal fees from Genomic Health, grants from CSL Behring, grants from Nihon Kayaku, grants from Shionogi, outside the submitted work; Other Authors: none., (Copyright © 2019 Elsevier Inc. All rights reserved.)
- Published
- 2020
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36. Prediction of poor neurological development in patients with symptomatic congenital cytomegalovirus diseases after oral valganciclovir treatment.
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Fukushima S, Morioka I, Ohyama S, Nishida K, Iwatani S, Fujioka K, Mandai T, Matsumoto H, Nakamachi Y, Deguchi M, Tanimura K, Iijima K, and Yamada H
- Subjects
- Administration, Oral, Antiviral Agents adverse effects, Cytomegalovirus Infections diagnosis, Cytomegalovirus Infections epidemiology, Female, Follow-Up Studies, Humans, Incidence, Infant, Male, Neurodevelopmental Disorders epidemiology, Neurodevelopmental Disorders etiology, Prognosis, Prospective Studies, Valganciclovir adverse effects, Antiviral Agents therapeutic use, Cytomegalovirus Infections congenital, Cytomegalovirus Infections drug therapy, Neurodevelopmental Disorders diagnosis, Valganciclovir therapeutic use
- Abstract
Objective: This study aimed to evaluate the neurodevelopmental outcomes of infants with symptomatic congenital cytomegalovirus (SCCMV) disease after antiviral treatment and investigate the symptoms at birth associated with a developmental quotient (DQ) < 70., Methods: In this prospective study conducted from 2009 to 2018, infants with SCCMV disease who received oral valganciclovir (VGCV; 32 mg/kg/day) for 6 weeks (November 2009 to June 2015) or 6 months (July 2015 to March 2018) were evaluated for their neurodevelopmental outcomes at around 18 months of corrected age. Sequelae were categorized as follows: no impairment with a DQ ≥ 80 and no hearing dysfunction; mild sequelae including unilateral hearing dysfunction or a DQ of 70-79; and severe sequelae with a DQ < 70, bilateral hearing dysfunction requiring hearing aids, blindness or epilepsy requiring anti-epileptic drugs. DQ was assessed using the Kyoto Scale of Psychological Development. Symptoms at birth associated with a DQ < 70 were determined using univariate and receiver operating characteristic curve analyses., Results: Of the 24 treated infants, 21 reached > 18 months of corrected age. Six (29%) were no impairment, 4 (19%) had mild sequelae, and 11 (52%) developed severe sequelae. The symptoms at birth associated with a DQ < 70 were microcephaly and/or small for gestational age., Conclusion: In our cohort of infants with SCCMV disease after VGCV treatment, the incidence of severe sequelae at 18 months of corrected age was around 50%. When microcephaly and/or small for gestational age are seen at birth, a low DQ may appear even after oral VGCV treatment., (Copyright © 2019 The Japanese Society of Child Neurology. Published by Elsevier B.V. All rights reserved.)
- Published
- 2019
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37. Diagnostic Value of Cytomegalovirus IgM Antibodies at Birth in PCR-Confirmed Congenital Cytomegalovirus Infection.
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Ohyama S, Fujioka K, Fukushima S, Abe S, Ashina M, Ikuta T, Nishida K, Matsumoto H, Nakamachi Y, Tanimura K, Yamada H, and Iijima K
- Subjects
- Antibodies, Viral metabolism, Cytomegalovirus genetics, Cytomegalovirus Infections immunology, DNA Viruses genetics, DNA, Viral analysis, Female, Humans, Infant, Infant, Newborn, Male, Predictive Value of Tests, Prospective Studies, Urine virology, Cytomegalovirus immunology, Cytomegalovirus Infections congenital, Cytomegalovirus Infections diagnosis, Immunoglobulin M metabolism
- Abstract
Although cytomegalovirus (CMV) DNA detection in urine is the standard method for diagnosing congenital cytomegalovirus infection (CCMVI), polymerase chain reaction (PCR) is not comprehensively available. Currently, the efficacy of CMV-specific IgM (CMV-IgM) and CMV-specific IgG (CMV-IgG) detection remains unclear. To determine the sensitivity and specificity of CMV-specific antibodies at birth, we investigated CMV-IgM and CMV-IgG titers in CCMVI cases and non-CCMVI controls, with confirmed diagnoses by urine quantitative real-time PCR within 3 weeks after birth. We included 174 infants with suspected CCMVI in whom serological testing was performed within the first 2 weeks after birth during 2012-2018. We classified the participants into a CCMVI group ( n = 32) and non-CCMVI group ( n = 142) based on their urine PCR results. The CMV-IgM-positive rate was 27/32 (84.4%) in the CCMVI group, compared with 1/142 (0.7%) in the non-CCMVI group ( p < 0.0001). The positive CMV-IgG rates were 32/32 (100%) in the CCMVI group and 141/142 (99.3%) in the non-CCMVI group. The positive predictive value for CMV-IgM was high at 96.4% (27/28). This value may be sufficient for clinical use, especially in settings with limited resources where PCR is unavailable. However, CCMVI screening by CMV-IgM alone appears insufficient because of the considerable number of false-negative cases.
- Published
- 2019
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38. Coexpression of ETV6/MDS1/EVI1 and ETV6/EVI1 fusion transcripts in acute myeloid leukemia with t(3;12)(q26.2;p13) and thrombocytosis.
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Yamamoto K, Yakushijin K, Ichikawa H, Okamura A, Nagao S, Kakiuchi S, Kurata K, Kawamoto S, Matsui K, Nakamachi Y, Saegusa J, Matsuoka H, and Minami H
- Subjects
- Bone Marrow pathology, Cell Line, Tumor, Chromosomes, Human, Pair 12, Chromosomes, Human, Pair 3, DNA Mutational Analysis, Humans, Karyotype, Male, Young Adult, ETS Translocation Variant 6 Protein, Gene Expression Regulation, Leukemic, Leukemia, Myeloid, Acute genetics, MDS1 and EVI1 Complex Locus Protein genetics, Oncogene Proteins, Fusion genetics, Proto-Oncogene Proteins c-ets genetics, Repressor Proteins genetics, Thrombocytosis genetics, Translocation, Genetic
- Published
- 2019
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39. MicroRNA-124 inhibits TNF-α- and IL-6-induced osteoclastogenesis.
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Ohnuma K, Kasagi S, Uto K, Noguchi Y, Nakamachi Y, Saegusa J, and Kawano S
- Subjects
- Animals, Interleukin-6 metabolism, Macrophage Colony-Stimulating Factor metabolism, Mice, NFATC Transcription Factors metabolism, Osteoprotegerin metabolism, RANK Ligand, Tumor Necrosis Factor-alpha metabolism, Macrophages metabolism, MicroRNAs genetics, Osteogenesis genetics
- Abstract
Receptor activator for nuclear factor κB ligand (RANKL)-independent osteoclastogenic pathway was reported recently. MicroRNA (miR)-124 has been known to suppress RANKL-dependent osteoclastogenesis by inhibiting NFATc1 expression. However, whether miR-124 regulates a RANKL-independent pathway has not been elucidated. In this study, we examined whether a RANKL-independent pathway is regulated by miR-124 in addition to the RANKL-dependent one. Using osteoclastogenic culture and pit-formation assay, we found that a miR-124 mimic inhibited osteoclastogenesis in mouse bone marrow-derived macrophages stimulated by TNF-α, IL-6, and M-CSF in the presence of osteoprotegerin. We also showed that the expression levels of osteoclast-specific genes and NFATc1 protein were suppressed in the miR-124 mimic-transfected cells by performing quantitative-polymerase chain reaction and western blotting. Our results indicate that miR-124 is important in inhibiting both RANKL-dependent and -independent osteoclast differentiation by suppressing NFATc1-mediated pathway.
- Published
- 2019
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40. Efficacy of Valganciclovir Treatment Depends on the Severity of Hearing Dysfunction in Symptomatic Infants with Congenital Cytomegalovirus Infection.
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Ohyama S, Morioka I, Fukushima S, Yamana K, Nishida K, Iwatani S, Fujioka K, Matsumoto H, Imanishi T, Nakamachi Y, Deguchi M, Tanimura K, Iijima K, and Yamada H
- Subjects
- Cytomegalovirus Infections virology, Evoked Potentials, Auditory, Brain Stem, Female, Hearing Loss, Sensorineural virology, Humans, Infant, Male, Treatment Outcome, Valganciclovir pharmacology, Viral Load, Cytomegalovirus Infections drug therapy, Cytomegalovirus Infections physiopathology, Hearing Loss, Sensorineural drug therapy, Hearing Loss, Sensorineural physiopathology, Severity of Illness Index, Valganciclovir therapeutic use
- Abstract
Although earlier studies have shown that antiviral treatment regimens using valganciclovir (VGCV) improved hearing function in some infants with congenital cytomegalovirus (CMV) infection; its efficacy on the severity of hearing dysfunction is unclear. We conducted a prospective study among 26 infants with congenital CMV infections from 2009 to 2018. Oral VGCV (32 mg/kg/day) was administered for 6 weeks (November 2009 to June 2015; n = 20) or 6 months (July 2015 to March 2018, n = 6). Hearing function was evaluated by measuring the auditory brainstem response before VGCV treatment and at 6 months. Hearing dysfunction, defined as a V-wave threshold >40 dB, was categorized into: most severe, ≥91 dB; severe, 61⁻90 dB; and moderate, 41⁻60 dB. Hearing improvement was defined as a decrease of ≥20 dB from the pretreatment V-wave threshold. Of 52 ears in 26 infants with congenital CMV infection, 29 (56%) had hearing dysfunction, and of 29 ears, 16 (55%) improved after VGCV treatment. Although, 16 (84%) of 19 ears with moderate or severe hearing dysfunction improved after treatment ( p < 0.001), 10 ears with the most severe form did not. In conclusion, VGCV treatment is effective in improving moderate and severe hearing dysfunction in infants with congenital CMV infection.
- Published
- 2019
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41. Sequence analyses of variable cytomegalovirus genes for distinction between breast milk- and transfusion-transmitted infections in very-low-birth-weight infants.
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Furui Y, Yamagishi N, Morioka I, Taira R, Nishida K, Ohyama S, Matsumoto H, Nakamachi Y, Hasegawa T, Matsubayashi K, Nagai T, and Satake M
- Subjects
- Female, Humans, Infant, Newborn, Pregnancy, Chemokines, CXC genetics, Chemokines, CXC metabolism, DNA, Viral genetics, DNA, Viral metabolism, Infant, Very Low Birth Weight, Viral Proteins genetics, Viral Proteins metabolism, Cytomegalovirus genetics, Cytomegalovirus metabolism, Cytomegalovirus Infections genetics, Cytomegalovirus Infections metabolism, Cytomegalovirus Infections transmission, Fetomaternal Transfusion, Genes, Viral, Genetic Variation, Infectious Disease Transmission, Vertical, Milk, Human virology, Sequence Analysis, DNA
- Abstract
Background: Cytomegalovirus (CMV) transmission to very-low-birth-weight infants (VLBWIs) sometimes induces serious clinical symptoms. Although breast milk is considered a major source of transmission, transfusion-transmitted CMV (TT-CMV) infection is often suspected when CMV disease develops after transfusion. Thus, it is clinically important to distinguish between transfusion-transmitted and breast milk-transmitted CMV infections., Study Design and Methods: Study A: The incidence of acquired CMV transmission was prospectively investigated in 65 VLBWIs. Study B: To determine the transmission routes in 18 TT-CMV-suspected VLBWIs who had been reported in our hemovigilance system, we performed polymerase chain reaction for CMV DNA in fed breast milk and/or repository blood samples related to transfused leukoreduced blood products. Furthermore, we evaluated the identity of CMV strains in patients' urine/blood samples and fed breast milk by sequence analyses of variable CMV genes UL139 and UL146., Results: Study A: Acquired CMV infection was found in 4 of 65 VLBWIs (6.2%). Study B: CMV DNA was detected in fed breast milk for 12 of 14 TT-CMV-suspected cases, for which breast milk was available. Furthermore, CMV DNA sequence-matching rates between fed breast milk and patients' urine/blood for both UL139 and UL146 genes were 100% or nearly 100% in 11 patients. In contrast, repository blood samples for 11 of 14 patients were CMV DNA negative., Conclusion: CMV is principally transmitted through breast milk in VLBWIs. The risk of TT-CMV seems to be extremely low when using leukoreduced blood products. Sequence analyses of the variable CMV genes are useful for evaluating CMV transmission routes., (© 2018 AABB.)
- Published
- 2018
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42. Expression of a novel ZMYND11/MBTD1 fusion transcript in CD7 + CD56 + acute myeloid leukemia with t(10;17)(p15;q21).
- Author
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Yamamoto K, Yakushijin K, Ichikawa H, Kakiuchi S, Kawamoto S, Matsumoto H, Nakamachi Y, Saegusa J, Matsuoka H, and Minami H
- Subjects
- Aged, Cell Cycle Proteins, Chromosomes, Human, Pair 10 genetics, Chromosomes, Human, Pair 17 genetics, Co-Repressor Proteins, DNA-Binding Proteins, Humans, Leukemia, Myeloid, Acute genetics, Leukemia, Myeloid, Acute metabolism, Male, Prognosis, Antigens, CD7 metabolism, CD56 Antigen metabolism, Carrier Proteins genetics, Chromosomal Proteins, Non-Histone genetics, Leukemia, Myeloid, Acute pathology, Oncogene Proteins, Fusion genetics, Translocation, Genetic
- Published
- 2018
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43. Determination of the antimicrobial susceptibility and molecular profile of clarithromycin resistance in the Mycobacterium abscessus complex in Japan by variable number tandem repeat analysis.
- Author
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Kusuki M, Osawa K, Arikawa K, Tamura M, Shigemura K, Shirakawa T, Nakamura T, Nakamachi Y, Fujisawa M, Saegusa J, and Tokimatsu I
- Subjects
- Adult, Aged, Aged, 80 and over, DNA, Bacterial chemistry, DNA, Bacterial genetics, DNA, Ribosomal chemistry, DNA, Ribosomal genetics, Female, Humans, Japan, Male, Middle Aged, Molecular Diagnostic Techniques methods, Mycobacterium Infections, Nontuberculous microbiology, RNA, Ribosomal, 23S genetics, Anti-Bacterial Agents pharmacology, Clarithromycin pharmacology, Drug Resistance, Bacterial, Microbial Sensitivity Tests methods, Minisatellite Repeats, Mycobacterium abscessus drug effects, Mycobacterium abscessus genetics
- Abstract
Mycobacterium abscessus complex, including three subspecies-M. abscessus, M. massiliense, and M. bolletii-is resistant to a variety of antibiotics so limited treatment options are available. The susceptibility of these subspecies to antimicrobial agents depends in particular on the erm(41) sequevar and rrl mutations in the 23S rRNA, which are potentially related to clarithromycin (CLR) resistance. The purpose of this study was to carry out identification and molecular characterization of these subspecies based on variable number of tandem repeats (VNTR) analysis. Twenty-four M. abscessus complex strains were identified as M. abscessus and M. massiliense and these subspecies could be discriminated between based on their resistance to CLR, as determined by truncation or mutation of erm(41) or mutation of rrl, as illustrated by their VNTR patterns. In conclusion, we confirmed that the CLR susceptibility profiles could be differentiated according to the subspecies of M. abscessus complex strains by their VNTR patterns., (Copyright © 2018. Published by Elsevier Inc.)
- Published
- 2018
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44. Associations between left ventricular diastolic function and right ventricular function in patients with and without preserved left ventricular ejection fraction.
- Author
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Oki T, Tanaka H, Imanishi T, Nakamachi Y, Saegusa J, Kawano S, Hirata KI, and Nishimura Y
- Subjects
- Adult, Age Factors, Aged, Diastole, Echocardiography, Echocardiography, Doppler, Female, Heart Failure physiopathology, Heart Failure, Diastolic diagnostic imaging, Heart Failure, Diastolic physiopathology, Humans, Male, Middle Aged, Multivariate Analysis, Sex Factors, Ventricular Dysfunction, Left physiopathology, Ventricular Dysfunction, Right physiopathology, Heart Failure diagnostic imaging, Stroke Volume, Ventricular Dysfunction, Left diagnostic imaging, Ventricular Dysfunction, Right diagnostic imaging, Ventricular Function, Left, Ventricular Function, Right
- Abstract
Background: The purpose of this study was to investigate associations between right ventricular (RV) function and left ventricular (LV) diastolic function in patients with reduced LV ejection fraction (LVEF) and preserved LVEF., Methods: A total of 139 patients who had undergone echocardiography were recruited. LV diastolic function was determined as the ratio of mitral inflow E to mitral e' lateral annular velocities (E/e'). RV function was determined as the RV index of myocardial performance (RIMP). Patients were divided into two groups: the preserved LVEF group (n = 100, LVEF ≥ 50%) and the reduced LVEF group (n = 39, LVEF < 50%)., Results: Associations between RV function and LV diastolic function in patients with reduced LVEF and preserved LVEF differed significantly. RIMP correlated significantly with E/e' in patients with reduced LVEF (r = 0.47, p = 0.003), but not in those with preserved LVEF (r = 0.04, p = 0.68). An important finding of the multivariate regression analysis showed that RIMP was the only independent determinant of E/e' in patients with reduced LVEF, whereas age and gender (not RIMP) was the independent determinant of E/e' in patients with preserved LVEF., Conclusions: Associations between RV function and LV diastolic function in patients with reduced LVEF and preserved LVEF differed significantly, and RV function showed a close correlation with LV diastolic function in patients with reduced LVEF, but not in those with preserved LVEF. Thus, these findings may well have clinical implications for better management of patients with reduced LVEF.
- Published
- 2018
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45. ETV6-ABL1 fusion combined with monosomy 7 in childhood B-precursor acute lymphoblastic leukemia.
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Uemura S, Nishimura N, Hasegawa D, Shono A, Sakaguchi K, Matsumoto H, Nakamachi Y, Saegusa J, Yokoi T, Tahara T, Tamura A, Yamamoto N, Saito A, Kozaki A, Kishimoto K, Ishida T, Nino N, Takafuji S, Mori T, Iijima K, and Kosaka Y
- Subjects
- Adolescent, Chromosome Deletion, Chromosomes, Human, Pair 7 genetics, Dasatinib pharmacology, Female, Gene Fusion, Gene Rearrangement genetics, Humans, Imatinib Mesylate pharmacology, Induction Chemotherapy, Maintenance Chemotherapy, Oncogene Proteins, Fusion genetics, Precursor B-Cell Lymphoblastic Leukemia-Lymphoma drug therapy, Protein Kinase Inhibitors pharmacology, Protein-Tyrosine Kinases antagonists & inhibitors, Protein-Tyrosine Kinases genetics, Remission Induction, ETS Translocation Variant 6 Protein, Dasatinib therapeutic use, Imatinib Mesylate therapeutic use, Leukemia, B-Cell genetics, Oncogene Proteins v-abl genetics, Precursor B-Cell Lymphoblastic Leukemia-Lymphoma genetics, Protein Kinase Inhibitors therapeutic use, Proto-Oncogene Proteins c-ets genetics, Repressor Proteins genetics
- Abstract
ETV6-ABL1 fusion is a rare but recurrent oncogenic lesion found in childhood B-cell precursor acute lymphoblastic leukemia (BCP-ALL), without an established chromosomal abnormality, and is associated with poor outcome. In ETV6-ABL1-positive cases, an in-frame fusion produced by a complex rearrangement results in constitutive chimeric tyrosine kinase activity. Monosomy 7 is also a rare and unfavorable chromosomal abnormality in childhood BCP-ALL. Here, we report a 14-year-old female BCP-ALL patient with ETV6-ABL1 fusion combined with monosomy 7. She was admitted to our hospital because of persistent fever. Bone marrow nuclear cell count on admission was 855,000/µL with 90.0% blastic cells of lymphoid morphology. Blasts were positive for CD10, CD19, CD20, CD34, cyCD79a, cyTdT, HLA-DR, and CD66c, had a karyotype of 45, XX, - 7 [18/20] and a split signal for ABL1 FISH probe (92.7%), and were sensitive to tyrosine kinase inhibitors, imatinib and dasatinib, in vitro. ETV6-ABL1 fusion transcript was identified by whole transcriptome sequencing and confirmed by RT-PCR. She was treated with the high-risk protocol based on ALL-BFM 95, achieved complete remission (CR) after induction chemotherapy, and maintained CR for 4 months. To our knowledge, this is the first report of ETV6-ABL1 fusion combined with monosomy 7 in childhood BCP-ALL.
- Published
- 2018
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46. Identification of a heterozygous p.Gly568Val missense mutation in the TRPV3 gene in a Japanese patient with Olmsted syndrome: In silico analysis of TRPV3.
- Author
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Nagai H, Takaoka Y, Sugano A, Nakamachi Y, Kawano S, and Nishigori C
- Subjects
- Adult, Heterozygote, Humans, Male, Molecular Docking Simulation, Mutation, Missense, Keratoderma, Palmoplantar genetics, Rare Diseases genetics, TRPV Cation Channels genetics
- Abstract
Olmsted syndrome is a very rare congenital disorder, characterized by palmoplantar keratoderma and periorificial keratotic lesions. Recently, TRPV3 was reported to be a causative gene of Olmsted syndrome. We identified a heterozygous missense mutation of TRPV3, c.1703G>T, p.Gly568Val, in a Japanese patient with Olmsted syndrome. To the best of our knowledge, this is the first report of a Japanese patient with Olmsted syndrome harboring a missense mutation in TRPV3. We conducted in silico analysis of TRPV3 to evaluate whether the p.Gly568Val leads to structural changes in the TRPV3 selectivity filter. The selectivity filter was shown to become dilated and hyperpermeable as a result of genetic mutation (p.Gly573Ser, p.Tr692Gly or p.Gly568Val) as well as after a change in temperature (300 K to 310 K). In silico analysis of TRPV3 could be a useful approach in predicting mutation-induced activated states of ion channels, and thus enrich our understanding of the pathogenesis of Olmsted syndrome., (© 2017 Japanese Dermatological Association.)
- Published
- 2017
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47. [Performance Utility of High Sensitivity Quantitative Assay for HBs Antigen].
- Author
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Sato I, Uto K, Fukuzumi N, Kitaaki S, Watanabe Y, Sakurai K, Ishida N, Oyabu C, Nakamachi Y, Hayashi N, and Saegusa J
- Subjects
- Hepatitis B virus immunology, Humans, Sensitivity and Specificity, Serologic Tests, Hepatitis B diagnosis, Hepatitis B Surface Antigens immunology, Immunoenzyme Techniques
- Abstract
A high sensitivity quantitative assay for hepatitis B virus (HBV) surface antigen (HBsAg-HQ assay) was recently developed and is useful for earlier detection of HBV reactivation. We created HBsAg-HQ assay operational proce- dures by the sample transport system and laboratory information system. In this study, we evaluated the perfor- mance and utility of the HBsAg-HQ assay based on our operational procedures using internal quality control (IQC) data and 13,762 samples routinely measured for 8 months. The IQC data of the HBsAg-HQ assay demonstrated good accuracy (CV: 1.6-2.7%). The difference in IQC data between two of the same analyzers or several reagent lots had no clinical significance. Of 13,762 samples, HBsAg titer was negative in 12,592(91.5%) and positive in 1,169(8.5%), and HBsAg negative samples were remarkably lower(<0.001 IU/mL) than the cut-off value(0.005 IU/mL). Among 114 HBsAg weakly positive samples ranging from 0.005 to 1.000 IU/mL, false positive results occurred in 12 samples, which were converted into negative results after re-measurement. We could effectively perform carry-over prevention and dilution of high titer samples using our operational procedures. Furthermore, we performed inhibition test in 52 HBsAg weakly positive samples, and 20 samples, most of which were taken from patients with connective tissue disease or malignancy, were judged as non-specific reactivity. Taken together, our operational HBsAg-HQ assay procedures may contribute to efficient workflow for routine testing. Moreover, the HBsAg-HQ assay may be clinically useful for not only highly sensitive assays, but also for reducing false positives.
- Published
- 2017
48. Telomeric Region of the Spinal Muscular Atrophy Locus Is Susceptible to Structural Variations.
- Author
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Noguchi Y, Onishi A, Nakamachi Y, Hayashi N, Harahap NI, Rochmah MA, Shima A, Yanagisawa S, Morisada N, Nakagawa T, Iijima K, Kasagi S, Saegusa J, Kawano S, Shinohara M, Tairaku S, Saito T, Kubo Y, Saito K, and Nishio H
- Subjects
- Adolescent, Adult, Aged, Centromere genetics, Child, Child, Preschool, DNA Copy Number Variations, Exons, Female, Humans, Infant, Male, Middle Aged, Neuronal Apoptosis-Inhibitory Protein genetics, Severity of Illness Index, Survival of Motor Neuron 1 Protein genetics, Survival of Motor Neuron 2 Protein genetics, Young Adult, Genetic Loci, Muscular Atrophy, Spinal genetics, Telomere genetics
- Abstract
Background: Most patients with spinal muscular atrophy lack the survival motor neuron 1 gene (SMN1) in the telomeric region of the spinal muscular atrophy locus on chromosome 5q13. On the other hand, the copy number of SMN2, a centromeric homolog of SMN1, is increased in many of these patients. This study aimed to clarify the mechanism underlying these structural variations., Methods: We determined the copy numbers of telomeric and centromeric genes in the spinal muscular atrophy locus of 86 patients and 22 control subjects using multiplex ligation-dependent probe amplification analysis. Then, we chose 74 patients lacking SMN1 exons 7 and 8, and compared their dataset with that of 22 control subjects retaining SMN1 exons 7 and 8., Results: The SMN2 copy number was shown to vary widely and to correlate with the disease severity of the patients. Interestingly, telomeric NAIP and telomeric GTF2H2 showed similar tendencies. We also noted positive correlations among the copy number of SMN2 and the telomeric genes of the spinal muscular atrophy locus. However, the copy numbers of centromeric NAIP and centromeric GTF2H2 were stable among the patients, with both approximating a value of two., Conclusion: Our findings suggested that the telomeric region of the spinal muscular atrophy locus appears to be susceptible to structural variation, whereas the centromeric region is stable. Moreover, according to our results, new SMN2 copies may be generated in the telomeric region of the spinal muscular atrophy locus, supporting the SMN1-to-SMN2 gene conversion theory., (Copyright © 2016 Elsevier Inc. All rights reserved.)
- Published
- 2016
- Full Text
- View/download PDF
49. MicroRNA-124 inhibits the progression of adjuvant-induced arthritis in rats.
- Author
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Nakamachi Y, Ohnuma K, Uto K, Noguchi Y, Saegusa J, and Kawano S
- Subjects
- Animals, CCAAT-Enhancer-Binding Protein-alpha drug effects, CCAAT-Enhancer-Binding Protein-alpha genetics, Disease Progression, Gene Expression Regulation drug effects, Humans, Integrin beta1 drug effects, Integrin beta1 genetics, RANK Ligand drug effects, RANK Ligand genetics, RNA, Messenger metabolism, Rats, Rats, Inbred Lew, Sp1 Transcription Factor drug effects, Sp1 Transcription Factor genetics, Synovial Membrane cytology, Transcription Factors drug effects, Transcription Factors genetics, Arthritis, Experimental genetics, Cell Differentiation drug effects, Cell Proliferation drug effects, MicroRNAs pharmacology, Osteoclasts drug effects, RNA, Messenger drug effects
- Abstract
Objective: MicroRNAs (miRNAs) are small endogenous, non-coding RNAs that act as post-transcriptional regulators. We analysed the in vivo effect of miRNA-124 (miR-124, the rat analogue of human miR-124a) on adjuvant-induced arthritis (AIA) in rats., Methods: AIA was induced in Lewis rats by injecting incomplete Freund's adjuvant with heat-killed Mycobacterium tuberculosis. Precursor (pre)-miR-124 was injected into the right hind ankle on day 9. Morphological changes in the ankle joint were assessed by micro-CT and histopathology. Cytokine expression was examined by western blotting and real-time RT-PCR. The effect of miR-124 on predicted target messenger RNAs (mRNAs) was examined by luciferase reporter assays. The effect of pre-miR-124 or pre-miR-124a on the differentiation of human osteoclasts was examined by tartrate-resistant acid phosphatase staining., Results: We found that miR-124 suppressed AIA in rats, as demonstrated by decreased synoviocyte proliferation, leucocyte infiltration and cartilage or bone destruction. Osteoclast counts and expression level of receptor activator of the nuclear factor κB ligand (RANKL), integrin β1 (ITGB1) and nuclear factor of activated T cells cytoplasmic 1 (NFATc1) were reduced in AIA rats treated with pre-miR-124. Luciferase analysis showed that miR-124 directly targeted the 3'UTR of the rat NFATc1, ITGB1, specificity protein 1 and CCAAT/enhancer-binding protein α mRNAs. Pre-miR-124 also suppressed NFATc1 expression in RAW264.7 cells. Both miR-124 and miR-124a directly targeted the 3'-UTR of human NFATc1 mRNA, and both pre-miR-124 and pre-miR-124a suppressed the differentiation of human osteoclasts., Conclusions: We found that miR-124 ameliorated AIA by suppressing critical prerequisites for arthritis development, such as RANKL and NFATc1. Thus, miR-124a is a candidate for therapeutic use for human rheumatoid arthritis., (Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/)
- Published
- 2016
- Full Text
- View/download PDF
50. Neurological outcomes in symptomatic congenital cytomegalovirus-infected infants after introduction of newborn urine screening and antiviral treatment.
- Author
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Nishida K, Morioka I, Nakamachi Y, Kobayashi Y, Imanishi T, Kawano S, Iwatani S, Koda T, Deguchi M, Tanimura K, Yamashita D, Nibu K, Funakoshi T, Ohashi M, Inoue N, Iijima K, and Yamada H
- Subjects
- Antiviral Agents therapeutic use, Antiviral Agents urine, Cohort Studies, Cytomegalovirus genetics, Cytomegalovirus Infections drug therapy, Female, Ganciclovir analogs & derivatives, Ganciclovir therapeutic use, Humans, Infant, Newborn urine, Japan, Male, Neonatal Screening methods, Polymerase Chain Reaction, Treatment Outcome, Valganciclovir, Cytomegalovirus Infections diagnosis, Cytomegalovirus Infections urine
- Abstract
Background: Newborn screening for urinary cytomegalovirus (CMV) and early introduction of antiviral treatment are expected to improve neurological outcomes in symptomatic congenital CMV-infected infants. This cohort study prospectively evaluated neurological outcomes in symptomatic congenital CMV-infected infants following the introduction of hospital-based newborn urinary CMV screening and antiviral treatment., Subjects/methods: Following institutional review board approval and written informed consent from their parents, newborns were prospectively screened from 2009 to 2014 for urinary CMV-DNA by PCR within 1 week after birth at Kobe University Hospital and affiliated hospitals. CMV-positive newborns were further examined at Kobe University Hospital, and those diagnosed as symptomatic were treated with valganciclovir for 6 weeks plus immunoglobulin. Clinical neurological outcomes were evaluated at age ⩾12 months and categorized by the presence and severity of neurologic sequelae., Results: Urine samples of 6348 newborns were screened, with 32 (0.50%) positive for CMV. Of these, 16 were diagnosed with symptomatic infection and 12 received antiviral treatment. Four infants developed severe impairment (33%), three developed mild impairment (25%), and five developed normally (42%)., Conclusions: This is the first Japanese report of neurological assessments in infants with symptomatic congenital CMV infection who received early diagnosis and antiviral treatment. Urinary screening, resulting in early diagnosis and treatment, may yield better neurological outcomes in symptomatic congenital CMV-infected infants., (Copyright © 2015 The Japanese Society of Child Neurology. Published by Elsevier B.V. All rights reserved.)
- Published
- 2016
- Full Text
- View/download PDF
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