62 results on '"Nalbantoglu I"'
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2. H. pylori Pattern Gastritis with Negative Helicobacter Immunohistochemical Stain: Does A Specific Comment in Pathology Report Impact Clinical Management?
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Hu, X, primary, Lucas, E, additional, Hammer, S, additional, Gopal, P, additional, Bhalla, A, additional, Panarelli, N, additional, Westerhoff, M, additional, Cheng, J, additional, and Nalbantoglu, I, additional
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- 2021
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3. Metastatic Neoplasms of the Large Bile Ducts- A Clinicopathological Study
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Verma, A, primary, Nalbantoglu, I, additional, and Barbieri, A, additional
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- 2021
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4. Ischemic Preconditioning and Intermittent Clamping Increase the Tolerance of Fatty Liver to Hepatic Ischemia-Reperfusion Injury in the Rat
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Saidi, R.F., Chang, J., Brooks, S., Nalbantoglu, I., Adsay, V., and Jacobs, M.J.
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- 2007
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5. Liver Allograft Injury Post Treatment of Hepatitis C (HCV) with Pegylated Interferon alfa (PEG IFN) and Ribavirin (RIBA): Factors Favoring an Immune Mediated Hepatitis (IMH)?: Abstract# 1371: Poster Board #-Session: P238-III
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Ahmed, A., Sayuk, G., Lisker-Melman, M., Korenblat, K., Kerr, T., Nalbantoglu, I., Chapman, W., and Crippin, J. S.
- Published
- 2012
6. The Expression Of Interferon Receptor Alpha/Beta In Human Pancreatic Cancer In Nude Mice Is Essential For Tumor Response To Interferon Alpha Treatment
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Saidi, R.F., primary, Ahad, A., additional, Talik, J., additional, Nalbantoglu, I., additional, and Jacobs, M., additional
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- 2011
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7. Positron emission tomography with [(18)F]-3'-deoxy-3'fluorothymidine (FLT) as a predictor of outcome in patients with locally advanced resectable rectal cancer: a pilot study.
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Dehdashti F, Grigsby PW, Myerson RJ, Nalbantoglu I, Ma C, Siegel BA, Dehdashti, Farrokh, Grigsby, Perry W, Myerson, Robert J, Nalbantoglu, Ilke, Ma, Changqing, and Siegel, Barry A
- Abstract
Purpose: This pilot study was performed to evaluate whether tumor uptake of (18)F-labeled 3'-deoxy-3'fluorothymidine (FLT), a proliferative radiotracer, at baseline and early during therapy, is predictive of outcome in locally advanced rectal cancer.Procedures: Fourteen patients underwent positron emission tomography (PET) with 2-deoxy-2-[(18)F]fluoro-D-glucose (FDG) and FLT before therapy and PET with FLT approximately 2 weeks after initiating neoadjuvant chemoradiotherapy. FLT and FDG uptake were evaluated qualitatively and by maximum standardized uptake value (SUV(max)). Tumor FLT and FDG uptake were correlated with disease-free survival (DFS).Results: Thirteen patients underwent surgery after therapy, one died before surgery with progressive disease. FDG-PET/computed tomography detected regional lymph node metastases in five and FLT-PET was positive in one. High pretherapy FDG uptake (SUV(max) ≥ 14.3), low during-therapy FLT uptake (SUV(max) < 2.2), and high percentage change in FLT uptake (≥60 %) were predictive of improved DFS (p < 0.05 for all three values).Conclusion: Pretherapy FDG uptake, during-therapy FLT uptake, and percentage change in FLT uptake were equally predictive of DFS. [ABSTRACT FROM AUTHOR]- Published
- 2013
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8. The preliminary results of a residency satisfaction survey: 'To love and not to love Pathology'
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Pehlivanoglu, B., HUR HASSOY, Nalbantoglu, I., Calle, C., Dendooven, A., Okuducu, A. F., and Doganavsargil, B.
9. EFFECT OF METHYLPREDNISOLONE ON LIVER ISCHEMIAREPERFUSION INJURY.
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Saidi, Reza F, Chang, J, Brooks, S, Verb, S, Nalbantoglu, I, Adsay, V, and Jacobs, M J
- Published
- 2006
10. Intestinal epithelial HuR modulates distinct pathways of proliferation and apoptosis and attenuates small intestinal and colonic tumor development
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Sung-Hee Chang, Coen L. Klos, Sekhar Dharmarajan, ILKe Nalbantoglu, Jianyang Luo, Valerie Blanc, Nicholas O. Davidson, Grace Montenegro, Antonina Giammanco, Susan Kennedy, Timothy Hla, Yan Xie, Giammanco A, Blanc V, Montenegro G, Klos C, Xie Y, Kennedy S, Luo J, Chang SH, Hla T, Nalbantoglu I, Dharmarajan S, and Davidson NO.
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Cancer Research ,Post-translational regulation ,RNA-binding protein ,Context (language use) ,Apoptosis ,Cell Growth Processes ,Biology ,medicine.disease_cause ,Article ,AU-rich RNA ,Mice ,Gene expression ,Intestinal Neoplasms ,medicine ,Animals ,mRNA stability ,Intestinal Mucosa ,Mice, Knockout ,Cell growth ,Molecular biology ,Phenotype ,Protein-RNA interaction ,Small intestine ,Disease Models, Animal ,medicine.anatomical_structure ,Oncology ,ELAV Proteins ,Colonic Neoplasms ,Cancer research ,Carcinogenesis - Abstract
HuR is a ubiquitous nucleocytoplasmic RNA-binding protein that exerts pleiotropic effects on cell growth and tumorigenesis. In this study, we explored the impact of conditional, tissue-specific genetic deletion of HuR on intestinal growth and tumorigenesis in mice. Mice lacking intestinal expression of HuR (Hur IKO mice) displayed reduced levels of cell proliferation in the small intestine and increased sensitivity to doxorubicin-induced acute intestinal injury, as evidenced by decreased villus height and a compensatory shift in proliferating cells. In the context of Apcmin/+ mice, a transgenic model of intestinal tumorigenesis, intestinal deletion of the HuR gene caused a three-fold decrease in tumor burden characterized by reduced proliferation, increased apoptosis, and decreased expression of transcripts encoding antiapoptotic HuR target RNAs. Similarly, HurIKO mice subjected to an inflammatory colon carcinogenesis protocol [azoxymethane and dextran sodium sulfate (AOM-DSS) administration] exhibited a two-fold decrease in tumor burden. HurIKO mice showed no change in ileal Asbt expression, fecal bile acid excretion, or enterohepatic pool size that might explain the phenotype. Moreover, none of the HuR targets identified in Apcmin/+HurIKO were altered in AOM-DSS–treated HurIKO mice, the latter of which exhibited increased apoptosis of colonic epithelial cells, where elevation of a unique set of HuR-targeted proapoptotic factors was documented. Taken together, our results promote the concept of epithelial HuR as a contextual modifier of proapoptotic gene expression in intestinal cancers, acting independently of bile acid metabolism to promote cancer. In the small intestine, epithelial HuR promotes expression of prosurvival transcripts that support Wnt-dependent tumorigenesis, whereas in the large intestine epithelial HuR indirectly downregulates certain proapoptotic RNAs to attenuate colitis-associated cancer. Cancer Res; 74(18); 5322–35. ©2014 AACR.
- Published
- 2014
11. Ursodeoxycholic acid ameliorates erectile dysfunction and corporal fibrosis in diabetic rats by inhibiting the TGF-β1/Smad2 pathway.
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Cavusoglu Nalbantoglu I, Sevgi S, Kerimoglu G, Kadıoglu Duman M, and Kalyoncu NI
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- Animals, Male, Rats, Penis drug effects, Penis pathology, Ursodeoxycholic Acid pharmacology, Ursodeoxycholic Acid therapeutic use, Rats, Sprague-Dawley, Smad2 Protein metabolism, Erectile Dysfunction drug therapy, Erectile Dysfunction etiology, Transforming Growth Factor beta1 metabolism, Diabetes Mellitus, Experimental complications, Diabetes Mellitus, Experimental drug therapy, Fibrosis, Signal Transduction drug effects
- Abstract
Corporal tissue fibrosis is critical in diabetes-associated erectile dysfunction. Transforming growth factor-β1/Small mothers against decapentaplegic-2 (TGF-β1/Smad2) contributes to the induction of fibrosis in corporal tissue. Smad7 is accepted as a general negative regulator of Smad signaling, although its role in corporal fibrosis is unknown. Ursodeoxycholic acid (UDCA) is a hydrophilic bile acid used for biliary and liver related disorders and has antifibrotic effects in the liver. This study investigated the effects of UDCA on diabetic erectile dysfunction. Forty-eight male Spraque Dawley rats were divided into six groups: nondiabetic (n = 6), nondiabetic+20 mg/kg UDCA (n = 6), nondiabetic+80 mg/kg UDCA (n = 6), diabetic (n = 10), diabetic+20 mg/kg UDCA (n = 10), diabetic+80 mg/kg UDCA (n = 10). Diabetes was induced by intraperitoneal injection of 60 mg/kg Streptozocin. UDCA (20 and 80 mg/kg/day) or saline was subsequently administered via oral gavage for 56 days. Erectile function was evaluated as measurement of maximum intracavernosal pressure (m-ICP)/mean arterial pressure (MAP) and total ICP/MAP. Corporal tissues were evaluated by Western blotting and Masson's trichrome staining. Electrical stimulation-induced m-ICP/MAP responses were higher in UDCA-treated diabetic rats compared to untreated diabetic rats, respectively (20 mg/kg; 4 V: 0.77 ± 0.11 vs 0.45 ± 0.09, p = 0.0001 and 80 mg/kg; 4 V: 0.78 ± 0.11 vs 0.45 ± 0.09, p = 0.0001) UDCA prevented the increase in phospho-Smad2 and fibronectin protein expressions in diabetic corporal tissue both at 20 mg/kg (p = 0.0002, p = 0.002 respectively) and 80 mg/kg doses (p < 0.0001 for both). Smad7 protein expressions were significantly increased in the UDCA-treated diabetic groups compared to the untreated diabetic group (20 mg/kg: p = 0.0079; 80 mg/kg: p = 0.004). Furthermore, UDCA significantly prevented diabetes-induced increase in collagen (20 mg/kg: p = 0.0172; 80 mg/kg: p = 0.0003) and smooth muscle loss (20 mg/kg: p = 0.044; 80 mg/kg: p = 0.039). In conclusion, UDCA has a potential protective effect on erectile function in diabetic rats by altering fibrotic pathways via inhibition of TGF-β1/Smad2 and activation of Smad7., Competing Interests: Competing interests: The authors declare no competing interests., (© 2024. The Author(s), under exclusive licence to Springer Nature Limited.)
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- 2024
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12. Validation of Metallothionein Immunohistochemistry as a Highly Sensitive Screening Test for Wilson Disease.
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Stokes NL, Patil A, Adeyi O, Bhalla A, Brown I, Byrnes K, Calderaro J, Chen D, Chen W, Cooper C, Dhall D, Frankel W, Gooch GG, Gonzalez RS, Hammer S, Hale G, Lagana S, McKenzie C, Allende DS, Moreira RK, Nakhleh R, Nalbantoglu I, Pai RK, Salomao M, Schaeffer DF, Shih A, Shin JS, Simoes CC, Vij M, Rela M, Xue Y, Yantiss RK, Sabatto BZ, and Graham RP
- Abstract
Wilson disease (WD) is a rare autosomal recessive condition with protean clinical manifestations that result from biallelic ATP7B mutations. However, nondestructive tissue tests to be applied clinically to tissue specimens are not widely available to effectively assess patients for possible WD. Previously, we showed that metallothionein (MTH) immunohistochemistry (IHC) has a high sensitivity and specificity for WD diagnosis and, thus, represents a potentially powerful diagnostic tool that can be used in routine histologic sections. This study aimed to validate this finding in a large cohort of bona fide patients with WD and to correlate metallothionein expression with other histologic features. We identified 91 cases of WD, which included 28 needle biopsies and 64 explants from 14 centers worldwide. Histologic features were evaluated, and a histopathological pattern was assigned to each case. All cases were evaluated with Masson trichrome and MTH IHC (clone UC1MT, Abcam) using a previously published technique. Liver tissues from chronic cholestatic diseases (n = 42) were used as controls. The median age of the cohort was 28.5 years. Of the 91 total cases, 83 were positive for MTH immunostain. In the controls, all 42 cases were negative for MTH immunostain. The sensitivity and specificity of MTH immunostain for WD were 91.20% and 100%, respectively. MTH IHC is a highly sensitive and specific cost-effective screening tool for WD. It can be used for patients across age groups, varied histologic patterns, and fibrosis stages. This marker could prove to be a valuable tool in the evaluation of patients with possible WD., (Copyright © 2024 United States & Canadian Academy of Pathology. Published by Elsevier Inc. All rights reserved.)
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- 2024
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13. Validation of a whole slide image management system for metabolic-associated steatohepatitis for clinical trials.
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Pulaski H, Mehta SS, Manigat LC, Kaufman S, Hou H, Nalbantoglu I, Zhang X, Curl E, Taliano R, Kim TH, Torbenson M, Glickman JN, Resnick MB, Patel N, Taylor CE, Bedossa P, Montalto MC, Beck AH, and Wack KE
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- Humans, Clinical Trials as Topic, Reproducibility of Results, Biopsy, Liver pathology, Image Interpretation, Computer-Assisted methods, Observer Variation, Non-alcoholic Fatty Liver Disease pathology
- Abstract
The gold standard for enrollment and endpoint assessment in metabolic dysfunction-associated steatosis clinical trials is histologic assessment of a liver biopsy performed on glass slides. However, obtaining the evaluations from several expert pathologists on glass is challenging, as shipping the slides around the country or around the world is time-consuming and comes with the hazards of slide breakage. This study demonstrated that pathologic assessment of disease activity in steatohepatitis, performed using digital images on the AISight whole slide image management system, yields results that are comparable to those obtained using glass slides. The accuracy of scoring for steatohepatitis (nonalcoholic fatty liver disease activity score ≥4 with ≥1 for each feature and absence of atypical features suggestive of other liver disease) performed on the system was evaluated against scoring conducted on glass slides. Both methods were assessed for overall percent agreement with a consensus "ground truth" score (defined as the median score of a panel of three pathologists' glass slides). Each case was also read by three different pathologists, once on glass and once digitally with a minimum 2-week washout period between the modalities. It was demonstrated that the average agreement across three pathologists of digital scoring with ground truth was noninferior to the average agreement of glass scoring with ground truth [noninferiority margin: -0.05; difference: -0.001; 95% CI: (-0.027, 0.026); and p < 0.0001]. For each pathologist, there was a similar average agreement of digital and glass reads with glass ground truth (pathologist A, 0.843 and 0.849; pathologist B, 0.633 and 0.605; and pathologist C, 0.755 and 0.780). Here, we demonstrate that the accuracy of digital reads for steatohepatitis using digital images is equivalent to glass reads in the context of a clinical trial for scoring using the Clinical Research Network scoring system., (© 2024 PathAI. The Journal of Pathology: Clinical Research published by The Pathological Society of Great Britain and Ireland and John Wiley & Sons Ltd.)
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- 2024
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14. Clinical and Pathological Correlation in Concomitant Celiac Disease and Eosinophilic Esophagitis Suggests Separate Etiologies.
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Castrodad-Rodríguez CA, Cheng J, Westerhoff M, Liang GH, Lin J, Nalbantoglu I, Hu S, Sekhri R, and Panarelli NC
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- Humans, Duodenum pathology, Eosinophilic Esophagitis complications, Eosinophilic Esophagitis diagnosis, Eosinophilic Esophagitis pathology, Celiac Disease complications, Celiac Disease pathology, Enteritis, Eosinophilia, Gastritis
- Abstract
Introduction. Recently, an increased risk of celiac disease or eosinophilic esophagitis has been postulated among patients with either of these disorders, prompting some to suggest a common underlying mechanism, whereas others maintain that their co-existence is coincidental. Methods. We compared clinical and pathological features of 29 patients meeting criteria for both celiac disease and eosinophilic esophagitis to 26 celiac disease and 26 eosinophilic esophagitis controls to determine whether any distinguished study patients from controls. Results. Eight (28%) study patients presented with symptoms of both celiac disease and eosinophilic esophagitis, whereas 14 (48%) had celiac disease symptoms only and 5 had (17%) esophageal symptoms only. Study patients had similar autoimmune and atopic conditions seen in both control groups. Histological severity of disease, including Marsh II-III duodenal histology (study specimens: 87%; controls: 89%), mean peak esophageal eosinophil counts (study specimens: 55/400x field; controls: 80/400X field, P = .1), and presence of eosinophil microabscesses, scale crust, and subepithelial fibrosis were also similar to controls. Gluten-free diet resolved celiac disease-related symptoms (19 of 20, 95%) and histology (10 of 12, 83%), but not esophageal symptoms or eosinophilia in most study patients. Conclusion. Patients with concomitant celiac disease and eosinophilic esophagitis lack distinguishing features compared to controls with celiac disease or eosinophilic esophagitis alone. The occurrence of both disorders is likely coincidental in most cases., Competing Interests: Declaration of Conflicting InterestsThe author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.
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- 2024
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15. Liver allograft findings of donation after cardiac death versus brain death in recipients with hepatitis C related cirrhosis: a matched histologic comparison.
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Byrnes K, Vachharajani N, Doyle MM, and Nalbantoglu I
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- Allografts, Brain Death, Death, Hepacivirus, Humans, Liver Cirrhosis surgery, Retrospective Studies, Tissue Donors, Treatment Outcome, Cholestasis etiology, Hepatitis C complications
- Abstract
As the demand for organ transplantation increases, utilization of liver allografts of donation after cardiac death (DCD) is becoming increasingly necessary. Although the clinical outcomes of DCD allografts have been well described, the histologic features are not well characterized. Liver biopsies (n = 131) from age-matched DCD (n = 60) and donation after brain death (DBD; n = 71) recipients with hepatitis C virus were compared. Histologic features were studied in a blinded fashion, subgrouped into time 0, 0-6 months, and >6 months. In time 0 biopsies, more DCD cases had zone 3 (43.8 vs 29%) and bridging necrosis (19 vs 0%), albeit not statistically significant. At 0-6 months, more DCD cases had portal edema (p = 0.01). Pericholangitis (30.4% vs 18.8%) and acute cholestasis (21.7% vs 12.5%) were more common in DCD, but not statistically significant. At >6 months, pericholangitis (19% vs 4.5%) persisted in DCD, although not statistically significant. Overall, both groups had similar bile duct injury, portal inflammation, and fibrosis. Postoperative biliary complications were more common in DCD (19% vs 0%). Three-year and 10-year graft survival and patient outcomes were similar in both cohorts. Biliary alterations were more prevalent in the 0-6 month time period DCD biopsies, reflecting increased vulnerability of this group to biliary complications in the early post-orthotopic liver transplant (OLT) period. This finding may suggest poor graft perfusion despite comparable cold ischemia times. However, these features improved and DCD recipients have similar graft and overall survival compared to DBD recipients, indicating that carefully selected DCD liver allografts are a viable option for transplantation., (Copyright © 2022 Elsevier Inc. All rights reserved.)
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- 2022
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16. Gastric Xanthoma: An Incidental and Unusual Finding.
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Abu-Alreesh S, Rosen D, Nalbantoglu I, and Arbizu RA
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- Humans, Stomach Diseases diagnosis, Xanthomatosis diagnosis
- Abstract
Competing Interests: The authors report no conflicts of interest.
- Published
- 2021
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17. Yale Cancer Center Precision Medicine Tumor Board: molecular findings alter a diagnosis and treatment plan.
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Gibson JA, Finberg KE, Nalbantoglu I, Cecchini M, Ganzak A, Walther Z, Sklar JL, Eder JP, and Goldberg SB
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- Adenocarcinoma diagnosis, Adenocarcinoma genetics, Diagnosis, Differential, Gallbladder Neoplasms diagnosis, Gallbladder Neoplasms genetics, High-Throughput Nucleotide Sequencing, Humans, Male, Mesothelioma diagnosis, Mesothelioma genetics, Middle Aged, Molecular Targeted Therapy, Mutation, Peritoneal Neoplasms diagnosis, Peritoneal Neoplasms genetics, Prognosis, Adenocarcinoma therapy, Biomarkers, Tumor genetics, Gallbladder Neoplasms therapy, Mesothelioma therapy, Patient Care Planning, Peritoneal Neoplasms therapy, Precision Medicine
- Published
- 2021
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18. Recurrent Autoimmune Hepatitis and De Novo Autoimmune Hepatitis in the Liver Allograft.
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González IA, Hartley CP, and Nalbantoglu I
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- Adult, Female, Humans, Male, Middle Aged, Recurrence, Young Adult, Allografts pathology, Hepatitis, Autoimmune pathology, Liver Transplantation adverse effects, Postoperative Complications pathology
- Abstract
Objectives: Autoimmune hepatitis (AIH) is a form of severe hepatitis that can recur after orthotopic liver transplant (OLT). Presentation of AIH in patients with OLT who do not have a history of AIH is called de novo AIH (DNAIH). We evaluated the clinicopathologic characteristics of AIH and DNAIH., Methods: Clinicopathologic and outcome measures of 11 patients with recurrent AIH (RAIH) and 22 with DNAIH identified between 2000 and 2017 were compared., Results: Both cohorts showed female predominance. The mean clinical follow-up was 13 and 7.8 years in the in the RAIH and DNAIH groups, respectively (P = .1). Moderate portal inflammation was more common in patients with RAIH (64% vs 27%, P = .043). A trend was observed for more cases of DNAIH showing severe inflammation (36% vs 9%, P = .09) and submassive necrosis compared with RAIH (23% vs 0%, P = .086). A trend for more advanced fibrosis was also noted in the RAIH group (27% vs 5%, P = .059). Three patients with RAIH lost their grafts because of RAIH. Five-year disease-specific graft survival (GS) (P = .012) and overall GS (P = .015) were worse in patients with RAIH. Complement component 4d immunohistochemistry was positive in 2 patients with RAIH and 3 with DNAIH but showed no correlation with GS or other parameters., Conclusions: RAIH seems to have a more aggressive clinical course than DNAIH and warrants closer clinical follow-up and aggressive treatment., (© American Society for Clinical Pathology, 2020. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
- Published
- 2021
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19. Apobec1 complementation factor overexpression promotes hepatic steatosis, fibrosis, and hepatocellular cancer.
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Blanc V, Riordan JD, Soleymanjahi S, Nadeau JH, Nalbantoglu I, Xie Y, Molitor EA, Madison BB, Brunt EM, Mills JC, Rubin DC, Ng IO, Ha Y, Roberts LR, and Davidson NO
- Subjects
- Animals, Carcinoma, Hepatocellular genetics, Carcinoma, Hepatocellular pathology, Fatty Liver genetics, Fatty Liver pathology, Liver Cirrhosis genetics, Liver Cirrhosis pathology, Liver Neoplasms genetics, Liver Neoplasms pathology, Mice, Mice, Knockout, Neoplasm Proteins genetics, RNA-Binding Proteins genetics, Carcinoma, Hepatocellular metabolism, Fatty Liver metabolism, Liver Cirrhosis metabolism, Liver Neoplasms metabolism, Neoplasm Proteins metabolism, RNA-Binding Proteins metabolism
- Abstract
The RNA-binding protein Apobec1 complementation factor (A1CF) regulates posttranscriptional ApoB mRNA editing, but the range of RNA targets and the long-term effect of altered A1CF expression on liver function are unknown. Here we studied hepatocyte-specific A1cf-transgenic (A1cf+/Tg), A1cf+/Tg Apobec1-/-, and A1cf-/- mice fed chow or high-fat/high-fructose diets using RNA-Seq, RNA CLIP-Seq, and tissue microarrays from human hepatocellular cancer (HCC). A1cf+/Tg mice exhibited increased hepatic proliferation and steatosis, with increased lipogenic gene expression (Mogat1, Mogat2, Cidea, Cd36) associated with shifts in polysomal RNA distribution. Aged A1cf+/Tg mice developed spontaneous fibrosis, dysplasia, and HCC, and this development was accelerated on a high-fat/high-fructose diet and was independent of Apobec1. RNA-Seq revealed increased expression of mRNAs involved in oxidative stress (Gstm3, Gpx3, Cbr3), inflammatory response (Il19, Cxcl14, Tnfα, Ly6c), extracellular matrix organization (Mmp2, Col1a1, Col4a1), and proliferation (Kif20a, Mcm2, Mcm4, Mcm6), and a subset of mRNAs (including Sox4, Sox9, Cdh1) were identified in RNA CLIP-Seq. Increased A1CF expression in human HCC correlated with advanced fibrosis and with reduced survival in a subset with nonalcoholic fatty liver disease. In conclusion, we show that hepatic A1CF overexpression selectively alters polysomal distribution and mRNA expression, promoting lipogenic, proliferative, and inflammatory pathways leading to HCC.
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- 2021
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20. Reproducibility of AJCC Criteria for Classifying Deeply Invasive Colon Cancers Is Suboptimal for Consistent Cancer Staging.
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Panarelli NC, Hammer STG, Lin J, Gopal P, Nalbantoglu I, Zhou L, Cheng J, Gersten AJ, McHugh JB, Parkash V, Lucas E, and Westerhoff M
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- Adenocarcinoma classification, Adult, Aged, Aged, 80 and over, Colonic Neoplasms classification, Female, Humans, Male, Middle Aged, Neoplasm Staging standards, Observer Variation, Young Adult, Adenocarcinoma pathology, Colonic Neoplasms pathology, Neoplasm Staging methods
- Abstract
The eighth edition of the American Joint Committee on Cancer (AJCC) Staging Manual attempts to address ambiguity in the pT category assignment for colon cancer from prior editions. Despite modifications, the distinction between the pT3 and pT4a categories continues to be a source of diagnostic confusion. In this study, we assessed interobserver agreement among pathologists from different institutions in the application of AJCC eighth edition criteria for categorizing deeply invasive colonic adenocarcinomas. We identified morphologic patterns that produce diagnostic confusion. We assessed 47 colon cancers that closely approached the serosal surface. Six pathologists with interest in gastrointestinal pathology and 4 focused in other subspecialties classified each case as pT3 or pT4a, based on examination of low-magnification and high-magnification images of the most deeply invasive area. Interobserver agreement was assessed using Fleiss' κ. Cases displayed 3 morphologic patterns at the advancing tumor edge, namely, (1) continuous invasion through an inflammatory focus, (2) pushing border, and (3) infiltrative glands and cell clusters with serosal reaction. Gastrointestinal pathologists achieved slight (κ=0.21) or moderate (κ=0.46) and (κ=0.51) agreement in each category, whereas agreement among nongastrointestinal pathologist was fair (0.31) and (0.39), or moderate (0.57) for each category, respectively. In 10 (21%) cases, the distinction between pT3 and pT4a would have changed the overall clinical stage. We conclude that histologic criteria for serosal penetration is a persistent source of diagnostic ambiguity for gastrointestinal and general pathologists in the pT categorization of colon cancers. Clarification of these criteria will help ensure uniform reporting of pathologic and clinical stage.
- Published
- 2020
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21. Primary sclerosing cholangitis associated colitis: Characterization of clinical, histologic features, and their associations with liver transplantation.
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Aranake-Chrisinger J, Dassopoulos T, Yan Y, and Nalbantoglu I
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- Humans, Cholangitis, Sclerosing surgery, Colitis, Ulcerative surgery, Crohn Disease complications, Crohn Disease diagnosis, Inflammatory Bowel Diseases, Liver Transplantation
- Abstract
Background: Primary sclerosing cholangitis (PSC) associated inflammatory bowel disease (IBD) is a unique form of IBD (PSC-IBD) with distinct clinical and histologic features from ulcerative colitis (UC) and Crohn disease (CD). In patients with PSC and IBD, the severity of the two disease processes may depend on each other., Aim: To study the histologic and clinical features of PSC patients with and without IBD., Methods: We assessed specimens from patients with UC ( n = 28), CD ( n = 10), PSC and UC (PSC-UC; n = 26); PSC and CD (PSC-CD; n = 6); and PSC and no IBD (PSC-no IBD; n = 4) between years 1999-2013. PSC-IBD patients were matched to IBD patients without PSC by age and colitis duration. Clinical data including age, gender, age at IBD and PSC diagnoses, IBD duration, treatment, follow-up, orthotopic liver transplantation (OLT) were noted., Results: PSC-UC patients had more isolated right-sided disease ( P = 0.03), and less active inflammation in left colon, rectum ( P = 0.03 and P = 0.0006), and overall ( P = 0.0005) compared to UC. They required less steroids ( P = 0.01) and fewer colectomies ( P = 0.03) than UC patients. The PSC-CD patients had more ileitis and less rectal involvement compared to PSC-UC and CD. No PSC-CD patients required OLT compared to 38% of PSC-UC ( P = 0.1). PSC-IBD (PSC-UC and PSC-CD) patients with OLT had severe disease in the left colon and rectum ( P = 0.04)., Conclusion: PSC-UC represents a distinct form of IBD. The different disease phenotype in PSC-IBD patients with OLT may support liver-gut axis interaction, however warrants clinical attention and further research., Competing Interests: Conflict-of-interest statement: We have no financial relationships to disclose., (©The Author(s) 2020. Published by Baishideng Publishing Group Inc. All rights reserved.)
- Published
- 2020
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22. Cryptogenic cirrhosis: Old and new perspectives in the era of molecular and genomic medicine.
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Nalbantoglu I and Jain D
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- Genetic Testing, High-Throughput Nucleotide Sequencing, Humans, Liver Cirrhosis genetics, Exome Sequencing, Genomics, Liver Cirrhosis congenital, Molecular Medicine
- Abstract
Cryptogenic cirrhosis (CC) is defined as cirrhosis of unknown etiology despite extensive clinical, laboratory and pathologic work-up, and constitutes approximately 5-10% of all cirrhosis cases. Histologic examination can provide important clues and help identify the potential etiology of CC. Most CC cases can still be classified into four histologic patterns: hepatitic, steatotic, biliary, and patternless (bland). The use of genetic testing has significantly improved diagnostic ability and treatment, especially in pediatric patients with acute and chronic liver diseases. More recently, whole exome sequencing has been used for identifying genetic alterations that lead to a diagnosis in adults with liver disease of unknown etiology. Recent advances in genomic analysis has allowed the unraveling of the underlying etiology in a subset of CC cases, and also helped identify new disorders. Providing a diagnosis for these patients has several important implications for treatment, possible genetic counseling, and transplant eligibility. However, detailed clinical and histologic characterization of the patients still remains an important part of the CC work-up, since clinicopathologic and genomic correlation is crucial in making a diagnosis, or in some cases, discovery of a new entity. This article summarizes the main histologic findings that can be observed in CC cases, potential causes of CC, and recent advances in the field., (Copyright © 2019 Elsevier Inc. All rights reserved.)
- Published
- 2019
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23. The microscopic anatomy of the esophagus including the individual layers, specialized tissues, and unique components and their responses to injury.
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Zhang X, Patil D, Odze RD, Zhao L, Lisovsky M, Guindi M, Riddell R, Bellizzi A, Yantiss RK, Nalbantoglu I, and Appelman HD
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- Humans, Esophageal Mucosa blood supply, Esophageal Mucosa injuries, Esophageal Mucosa innervation, Esophageal Mucosa pathology, Esophagogastric Junction blood supply, Esophagogastric Junction injuries, Esophagogastric Junction innervation, Esophagogastric Junction pathology
- Abstract
The esophagus, a straight tube that connects the pharynx to the stomach, has the complex architecture common to the rest of the gastrointestinal tract with special differences that relate to its function as a conduit of ingested substances. For instance, it has submucosal glands that are unique and have a specific protective function. It has a squamous lining that exists nowhere else in the gut except the anus and it has a different submucosal nerve plexus when compared to the stomach and intestines. All of the layers of the esophageal wall and the specialized structures including blood and lymphatic vessels and nerves have specific responses to injury. The esophagus also has unique features such as patches of gastric mucosa called inlet patches at the very proximal part and it has a special sphincter mechanism at the most distal aspect. This review covers the normal microscopic anatomy of the esophagus and the patterns of reaction to stress and injury of each layer and each special structure., (© 2018 New York Academy of Sciences.)
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- 2018
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24. Unique causes of esophageal inflammation: a histopathologic perspective.
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Gopal P, Gibson JA, Lisovsky M, and Nalbantoglu I
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- Bacterial Infections metabolism, Bacterial Infections microbiology, Bacterial Infections pathology, Bacterial Infections virology, Biopsy, Candida albicans metabolism, Candidiasis metabolism, Candidiasis microbiology, Candidiasis virology, Cytomegalovirus metabolism, Cytomegalovirus Infections metabolism, Cytomegalovirus Infections microbiology, Cytomegalovirus Infections virology, Esophagoscopy, Herpes Simplex metabolism, Herpes Simplex microbiology, Herpes Simplex pathology, Herpes Simplex virology, Humans, Inflammation metabolism, Inflammation microbiology, Inflammation pathology, Inflammation virology, Simplexvirus metabolism, Eosinophilic Esophagitis metabolism, Eosinophilic Esophagitis microbiology, Eosinophilic Esophagitis pathology, Eosinophilic Esophagitis virology, Esophagitis, Peptic metabolism, Esophagitis, Peptic microbiology, Esophagitis, Peptic pathology, Esophagitis, Peptic virology, Esophagus metabolism, Esophagus microbiology, Esophagus pathology, Esophagus virology
- Abstract
Gastroenterologists frequently perform endoscopic esophageal mucosal biopsies for pathologic diagnosis in patients experiencing symptoms of esophagitis. The more common causes of esophagitis diagnosed on esophageal mucosal biopsy include reflux esophagitis, eosinophilic esophagitis, and infectious esophagitis caused by Candida albicans, herpes simplex virus, and/or cytomegalovirus. However, there are several causes of esophagitis seen less frequently by pathologists that are very important to recognize. We discuss unique types of esophageal inflammation, including acute bacterial esophagitis, esophageal manifestations of dermatologic diseases, medication-induced esophageal injury, and sloughing esophagitis; and we review their clinical and histopathologic features., (© 2018 New York Academy of Sciences.)
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- 2018
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25. Clinical, Histologic, and Immunophenotypic Features of Serrated Polyps in Patients With Inflammatory Bowel Disease.
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Yang C, Tarabishy Y, Dassopoulos T, and Nalbantoglu I
- Abstract
Background: Colorectal serrated polyps (SP), which include hyperplastic polyps (HP), sessile serrated adenomas/polyps (SSA/P), and traditional serrated adenomas, are not uncommon and have been implicated to play a role in the pathogenesis in a subset of sporadic colorectal carcinomas; however, their significance in patients with prolonged inflammatory bowel disease (IBD) remains unclear., Methods: We retrospectively studied the clinicopathologic features, BRAF and β-catenin immunohistochemistry staining patterns in 36 SPs from 28 patients with IBD compared with 40 SPs in patients without IBD., Results: Eleven SSA/Ps and 25 HPs from IBD and site-matched controls were included. SSA/Ps in the study group were slightly more commonly seen in males (55% vs. 41%, P = 0.7) and older patients (55.2 vs. 47.8 years, P = 0.2) compared to patients with HP. They were moderately larger (7.13 mm vs. 4.83 mm, P = 0.14) and more likely located on the right (63.6% vs. 32%, P = 0.46). Smaller percentage of SSA/Ps showed BRAF staining compared to controls (55.6% vs. 73.3%, P = 0.41) and HPs showed similar features (52.0% vs. 54.2%, P = 1). β-catenin was negative in all cases. During follow-up, only one patient in the SSA/P group developed carcinoma 42 months after at the same site and two developed adenoma-like low-grade dysplasia but no patients with HPs had such findings., Conclusions: Our findings show that SPs in IBD share similar clinicodemographic and immunophenotypical features with sporadic SPs. However, patients with SSA/Ps may have a slight increase in risk of developing dysplasia compared to patients with HPs in IBD.
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- 2018
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26. Frequent GNAQ and GNA14 Mutations in Hepatic Small Vessel Neoplasm.
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Joseph NM, Brunt EM, Marginean C, Nalbantoglu I, Snover DC, Thung SN, Yeh MM, Umetsu SE, Ferrell LD, and Gill RM
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- Adult, Aged, Female, Humans, Male, Middle Aged, Mutation, GTP-Binding Protein alpha Subunits, Gq-G11 genetics, Liver Neoplasms genetics, Neoplasms, Vascular Tissue genetics
- Abstract
Hepatic small vessel neoplasm (HSVN) is a recently described infiltrative vascular neoplasm of the liver, composed of small vessels. Although the infiltrative nature can mimic angiosarcoma, HSVN are thought to be benign or low-grade neoplasms because they lack cytologic atypia and increased proliferation. To characterize the molecular pathogenesis of HSVN, we performed both targeted panel sequencing and exome sequencing on 18 benign or low-grade vascular neoplasms in the liver including 8 HSVN, 6 classic cavernous hemangioma (CH), and 4 variant lesions (VL) with overlapping features between HSVN and CH. All 18 lesions had simple genomes without copy number alterations. In total, 75% (6/8) of HSVN demonstrated known activating hotspot mutations in GNAQ (2/8, p.Q209H) or GNA14 (4/8, p.Q205L), and the remaining 2 had the same missense mutation in GNAQ, p.G48L, which has not been previously described. 25% (1/4) of VL had a hotspot GNAQ p.Q209H mutation and another VL had a GNAQ p.G48L mutation. Known pathogenic mutations were not identified in any of the 6 CH. These data suggest that HSVN share a similar molecular biology to several other vascular lesions (congenital hemangioma, tufted angioma, anastomosing hemangioma, lobular capillary hemangioma, and kaposiform hemangioendothelioma) recently reported to have GNAQ, GNA11, or GNA14 mutations.
- Published
- 2018
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27. The impact of diet-induced hepatic steatosis in a murine model of hepatic ischemia/reperfusion injury.
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Liss KHH, McCommis KS, Chambers KT, Pietka TA, Schweitzer GG, Park SL, Nalbantoglu I, Weinheimer CJ, Hall AM, and Finck BN
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- Animals, Diet, Western adverse effects, Disease Models, Animal, Humans, Liver blood supply, Liver surgery, Liver Function Tests, Liver Transplantation standards, Male, Mice, Mice, Inbred C57BL, Non-alcoholic Fatty Liver Disease etiology, Obesity etiology, Reperfusion Injury etiology, Tissue and Organ Harvesting standards, Liver pathology, Liver Transplantation adverse effects, Non-alcoholic Fatty Liver Disease pathology, Obesity pathology, Reperfusion Injury pathology
- Abstract
The prevalence of obesity-associated nonalcoholic fatty liver disease has significantly increased over the past decade, and end-stage liver disease secondary to nonalcoholic steatohepatitis has become 1 of the most common indications for liver transplantation. This both increases the demand for organs and decreases the availability of donor livers deemed suitable for transplantation. Although in the past many steatotic livers were discarded due to concerns over enhanced susceptibility to ischemia/reperfusion injury (IRI) and organ failure, the discrepancy between supply and demand has resulted in increasing use of expanded criteria donor organs including steatotic livers. However, it remains controversial whether steatotic livers can be safely used for transplantation and how best to improve the performance of steatotic grafts. We aimed to evaluate the impact of diet-induced hepatic steatosis in a murine model of IRI. Using a diet of high trans-fat, fructose, and cholesterol (HTF-C) and a diet high in saturated fats, sucrose, and cholesterol (Western diet), we were able to establish models of mixed macrovesicular and microvesicular steatosis (HTF-C) and microvesicular steatosis (Western). We found that the presence of hepatic steatosis, whether it is predominantly macrovesicular or microvesicular, significantly worsens IRI as measured by plasma alanine aminotransferase levels and inflammatory cytokine concentration, and histological evaluation for necrosis. Additionally, we report on a novel finding in which hepatic IRI in the setting of steatosis results in the induction of the necroptosis factors, receptor interacting protein kinase (RIPK) 3, RIPK1, and mixed-lineage kinase domain-like. These data lay the groundwork for additional experimentation to test potential therapeutic approaches to limit IRI in steatotic livers by using a genetically tractable system. Liver Transplantation 24 908-921 2018 AASLD., (© 2018 by the American Association for the Study of Liver Diseases.)
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- 2018
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28. Differentiation of Hepatocellular Carcinoma from Other Hepatic Malignancies in Patients at Risk: Diagnostic Performance of the Liver Imaging Reporting and Data System Version 2014.
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Fraum TJ, Tsai R, Rohe E, Ludwig DR, Salter A, Nalbantoglu I, Heiken JP, and Fowler KJ
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- Adolescent, Adult, Aged, Aged, 80 and over, Female, Humans, Image Interpretation, Computer-Assisted standards, Magnetic Resonance Imaging, Male, Middle Aged, Reproducibility of Results, Retrospective Studies, Tomography, X-Ray Computed, Young Adult, Carcinoma, Hepatocellular diagnostic imaging, Image Interpretation, Computer-Assisted methods, Liver Neoplasms diagnostic imaging
- Abstract
Purpose To evaluate the diagnostic performance and interrater reliability of the Liver Imaging Reporting and Data System (LI-RADS) version 2014 in differentiating hepatocellular carcinoma (HCC) from non-HCC malignancy in a population of patients at risk for HCC. Materials and Methods This retrospective HIPAA-compliant institutional review board-approved study was exempt from informed consent. A total of 178 pathology-proven malignant liver masses were identified in 178 patients at risk for HCC but without established extrahepatic malignancy from August 2012 through August 2015. Two readers blinded to pathology findings and clinical follow-up data independently evaluated a liver protocol magnetic resonance or computed tomography study for each lesion and assigned LI-RADS categories, scoring all major and most ancillary features. Statistical analyses included the independent samples t test, x
2 test, Fisher exact test, and Cohen k. Results This study included 136 HCCs and 42 non-HCC malignancies. Specificity and positive predictive value of an HCC imaging diagnosis (LR-5 or LR-5V) were 69.0% and 90.5%, respectively, for reader 1 (R1) and 88.3% and 95.5%, respectively, for reader 2 (R2). Tumor in vein was a common finding in patients with non-HCC malignancies (R1, 10 of 42 [23.8%]; R2, five of 42 [11.9%]). Exclusion of the LR-5V pathway improved specificity and positive predictive value for HCC to 83.3% and 92.9%, respectively, for R1 (six fewer false-positive findings) and 92.3% and 96.4%, respectively, for R2 (one fewer false-positive finding). Among masses with arterial phase hyperenhancement, the rim pattern was more common among non-HCC malignancies than among HCCs for both readers (R1: 24 of 36 [66.7%] vs 13 of 124, [10.5%], P < .001; R2: 27 of 35 [77.1%] vs 21 of 123 [17.1%], P < .001) (k = 0.76). Exclusion of rim arterial phase hyperenhancement as a means of satisfying LR-5 criteria also improved specificity and positive predictive value for HCC (R1, two fewer false-positive findings). Conclusion Modification of the algorithmic role of tumor in vein and rim arterial phase hyperenhancement improves the diagnostic performance of LI-RADS version 2014 in differentiating HCC from non-HCC malignancy.© RSNA, 2017 Online supplemental material is available for this article.- Published
- 2018
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29. Genomic regions associated with susceptibility to Barrett's esophagus and esophageal adenocarcinoma in African Americans: The cross BETRNet admixture study.
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Sun X, Chandar AK, Canto MI, Thota PN, Brock M, Shaheen NJ, Beer DG, Wang JS, Falk GW, Iyer PG, Abrams JA, Venkat-Ramani M, Veigl M, Miron A, Willis J, Patil DT, Nalbantoglu I, Guda K, Markowitz SD, Zhu X, Elston R, and Chak A
- Subjects
- Adenocarcinoma ethnology, Barrett Esophagus ethnology, Esophageal Neoplasms ethnology, Humans, Adenocarcinoma genetics, Black or African American, Barrett Esophagus genetics, Esophageal Neoplasms genetics, Genetic Predisposition to Disease
- Abstract
Background: Barrett's esophagus (BE) and esophageal adenocarcinoma (EAC) are far more prevalent in European Americans than in African Americans. Hypothesizing that this racial disparity in prevalence might represent a genetic susceptibility, we used an admixture mapping approach to interrogate disease association with genomic differences between European and African ancestry., Methods: Formalin fixed paraffin embedded samples were identified from 54 African Americans with BE or EAC through review of surgical pathology databases at participating Barrett's Esophagus Translational Research Network (BETRNet) institutions. DNA was extracted from normal tissue, and genotyped on the Illumina OmniQuad SNP chip. Case-only admixture mapping analysis was performed on the data from both all 54 cases and also on a subset of 28 cases with high genotyping quality. Haplotype phases were inferred with Beagle 3.3.2, and local African and European ancestries were inferred with SABER plus. Disease association was tested by estimating and testing excess European ancestry and contrasting it to excess African ancestry., Results: Both datasets, the 54 cases and the 28 cases, identified two admixture regions. An association of excess European ancestry on chromosome 11p reached a 5% genome-wide significance threshold, corresponding to -log10(P) = 4.28. A second peak on chromosome 8q reached -log10(P) = 2.73. The converse analysis examining excess African ancestry found no genetic regions with significant excess African ancestry associated with BE and EAC. On average, the regions on chromosomes 8q and 11p showed excess European ancestry of 15% and 20%, respectively., Conclusions: Chromosomal regions on 11p15 and 8q22-24 are associated with excess European ancestry in African Americans with BE and EAC. Because GWAS have not reported any variants in these two regions, low frequency and/or rare disease associated variants that confer susceptibility to developing BE and EAC may be driving the observed European ancestry association evidence.
- Published
- 2017
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30. Tumor budding in intestinal-type gastric adenocarcinoma is associated with nodal metastasis and recurrence.
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Olsen S, Jin L, Fields RC, Yan Y, and Nalbantoglu I
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- Adenocarcinoma surgery, Adult, Aged, Aged, 80 and over, Cell Differentiation, Female, Gastrectomy, Humans, Lymphatic Metastasis, Male, Middle Aged, Neoplasm Grading, Neoplasm Staging, Predictive Value of Tests, Risk Factors, Stomach Neoplasms surgery, Time Factors, Treatment Outcome, Adenocarcinoma secondary, Neoplasm Recurrence, Local, Stomach Neoplasms pathology
- Abstract
Gastric adenocarcinoma (GAC) is a common cause of cancer-related death worldwide. GAC can be classified as intestinal or diffuse. Intestinal-type cancers are common and reported to have a better prognosis compared to diffuse cancers. Studies have shown the presence and amount of tumor budding in intestinal carcinomas of the colon and esophagus to predict nodal metastasis and recurrence. Our aim is to determine if tumor budding in intestinal-type GAC correlates with prognostic features. One hundred four patients treated with primary surgical excision between 1999 and 2013 were identified. Histologic type (intestinal, diffuse, or mixed), tumor grade, T-stage, and lymph node status were evaluated. Tumor bud scores were assigned to all intestinal-type cancers using methods previously described for colorectal adenocarcinoma. Scores of <1 were designated as low and ≥1 as high. Tumor characteristics were as follows: 52 intestinal (50%), 36 diffuse (35%), and 16 mixed (15%). Of the 52 cases with intestinal histology, 4 were well (8%), 28 were moderately (54%), and 20 were poorly differentiated (38%). Thirty-three (63%) of the intestinal tumors had high tumor bud scores. Cases with high scores were associated with higher T-stage, N-stage, and grade (P<.001, P<.001, and P=.002). These also had a higher likelihood of recurrence (P=.007). In our cohort, high tumor bud scores in intestinal-type GAC have higher T-stage, N-stage, grade, and likelihood of recurrence. Assessment of tumor budding may guide clinical management in a subset of patients., (Copyright © 2017 Elsevier Inc. All rights reserved.)
- Published
- 2017
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31. How does it feel to be a pathology resident? Results of a survey on experiences and job satisfaction during pathology residency.
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Pehlivanoglu B, Hassoy H, Calle C, Dendooven A, Nalbantoglu I, Reshchikova L, Gul G, and Doganavsargil B
- Subjects
- Adult, Career Choice, Europe, Female, Humans, Internship and Residency statistics & numerical data, Male, Physicians statistics & numerical data, Quality of Life, Surveys and Questionnaires, Job Satisfaction, Pathology statistics & numerical data, Physicians psychology
- Abstract
Residents' career choices and professional motivation can be affected from perception of their role and recognition within a medical team as well as their educational and workplace experiences. To evaluate pathology trainees' perceptions of their pathology residency, we conducted a 42-item survey via a web-based link questioning respondents' personal and institutional background, workplace, training conditions, and job satisfaction level. For the 208 residents from different European countries who responded, personal expectations in terms of quality of life (53%) and scientific excitement (52%) were the most common reasons why they chose and enjoy pathology. Sixty-six percent were satisfied about their relationship with other people working in their department, although excessive time spent on gross examination appeared less satisfactory. A set residency training program (core curriculum), a set annual scientific curriculum, and a residency program director existed in the program of 58, 60, and 69% respondents, respectively. Most respondents (76%) considered that pathologists have a direct and high impact on patient management, but only 32% agreed that pathologists cooperate with clinicians/surgeons adequately. Most (95%) found that patients barely know what pathologists do. Only 22% considered pathology and pathologists to be adequately positioned in their country's health care system. Almost 84% were happy to have chosen pathology, describing it as "puzzle solving," "a different fascinating world," and "challenging while being crucial for patient management." More than two thirds (72%) considered pathology and pathologists to face a bright future. However, a noticeable number of respondents commented on the need for better physical working conditions, a better organized training program, more interaction with experienced pathologists, and deeper knowledge on molecular pathology.
- Published
- 2017
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32. Targeting the mitochondrial pyruvate carrier attenuates fibrosis in a mouse model of nonalcoholic steatohepatitis.
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McCommis KS, Hodges WT, Brunt EM, Nalbantoglu I, McDonald WG, Holley C, Fujiwara H, Schaffer JE, Colca JR, and Finck BN
- Subjects
- Acetophenones pharmacology, Animals, Disease Models, Animal, Drug Evaluation, Preclinical, Exosomes drug effects, Hepatic Stellate Cells drug effects, Male, Mice, Inbred C57BL, Molecular Targeted Therapy, Random Allocation, Thiazolidinediones pharmacology, Acetophenones therapeutic use, Anion Transport Proteins antagonists & inhibitors, Mitochondrial Membrane Transport Proteins antagonists & inhibitors, Non-alcoholic Fatty Liver Disease drug therapy, Thiazolidinediones therapeutic use
- Abstract
Diseases of the liver related to metabolic syndrome have emerged as the most common and undertreated hepatic ailments. The cause of nonalcoholic fatty liver disease is the aberrant accumulation of lipid in hepatocytes, though the mechanisms whereby this leads to hepatocyte dysfunction, death, and hepatic fibrosis are still unclear. Insulin-sensitizing thiazolidinediones have shown efficacy in treating nonalcoholic steatohepatitis (NASH), but their widespread use is constrained by dose-limiting side effects thought to be due to activation of the peroxisome proliferator-activated receptor γ. We sought to determine whether a next-generation thiazolidinedione with markedly diminished ability to activate peroxisome proliferator-activated receptor γ (MSDC-0602) would retain its efficacy for treating NASH in a rodent model. We also determined whether some or all of these beneficial effects would be mediated through an inhibitory interaction with the mitochondrial pyruvate carrier 2 (MPC2), which was recently identified as a mitochondrial binding site for thiazolidinediones, including MSDC-0602. We found that MSDC-0602 prevented and reversed liver fibrosis and suppressed expression of markers of stellate cell activation in livers of mice fed a diet rich in trans-fatty acids, fructose, and cholesterol. Moreover, mice with liver-specific deletion of MPC2 were protected from development of NASH on this diet. Finally, MSDC-0602 directly reduced hepatic stellate cell activation in vitro, and MSDC-0602 treatment or hepatocyte MPC2 deletion also limited stellate cell activation indirectly by affecting secretion of exosomes from hepatocytes., Conclusion: Collectively, these data demonstrate the effectiveness of MSDC-0602 for attenuating NASH in a rodent model and suggest that targeting hepatic MPC2 may be an effective strategy for pharmacologic development. (Hepatology 2017;65:1543-1556)., (© 2016 by the American Association for the Study of Liver Diseases.)
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- 2017
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33. Lymphoid Aggregates Remodel Lymphatic Collecting Vessels that Serve Mesenteric Lymph Nodes in Crohn Disease.
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Randolph GJ, Bala S, Rahier JF, Johnson MW, Wang PL, Nalbantoglu I, Dubuquoy L, Chau A, Pariente B, Kartheuser A, Zinselmeyer BH, and Colombel JF
- Subjects
- Adult, Animals, B-Lymphocytes pathology, Crohn Disease pathology, Crohn Disease surgery, Female, Humans, Ileum diagnostic imaging, Ileum pathology, Imaging, Three-Dimensional, Inflammation, Intestines pathology, Intestines surgery, Lymph Nodes pathology, Lymph Nodes surgery, Lymphatic Vessels pathology, Lymphatic Vessels surgery, Male, Mesentery diagnostic imaging, Mesentery pathology, Mesentery surgery, Mice, Middle Aged, Tertiary Lymphoid Structures diagnostic imaging, Tertiary Lymphoid Structures pathology, Crohn Disease diagnostic imaging, Lymph Nodes diagnostic imaging, Lymphatic Vessels diagnostic imaging
- Abstract
Early pathological descriptions of Crohn disease (CD) argued for a potential defect in lymph transport; however, this concept has not been thoroughly investigated. In mice, poor healing in response to infection-induced tissue damage can cause hyperpermeable lymphatic collecting vessels in mesenteric adipose tissue that impair antigen and immune cell access to mesenteric lymph nodes (LNs), which normally sustain appropriate immunity. To investigate whether analogous changes might occur in human intestinal disease, we established a three-dimensional imaging approach to characterize the lymphatic vasculature in mesenteric tissue from controls or patients with CD. In CD specimens, B-cell-rich aggregates resembling tertiary lymphoid organs (TLOs) impinged on lymphatic collecting vessels that enter and exit LNs. In areas of creeping fat, which characterizes inflammation-affected areas of the bowel in CD, we observed B cells and apparent innate lymphoid cells that had invaded the lymphatic vessel wall, suggesting these cells may be mediators of lymphatic remodeling. Although TLOs have been described in many chronic inflammatory states, their anatomical relationship to preestablished LNs has never been revealed. Our data indicate that, at least in the CD-affected mesentery, TLOs are positioned along collecting lymphatic vessels in a manner expected to affect delivery of lymph to LNs., (Copyright © 2016 American Society for Investigative Pathology. Published by Elsevier Inc. All rights reserved.)
- Published
- 2016
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34. Hepatic small vessel neoplasm, a rare infiltrative vascular neoplasm of uncertain malignant potential.
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Gill RM, Buelow B, Mather C, Joseph NM, Alves V, Brunt EM, Liu TC, Makhlouf H, Marginean C, Nalbantoglu I, Sempoux C, Snover DC, Thung SN, Yeh MM, and Ferrell LD
- Subjects
- Adult, Aged, Aged, 80 and over, Biomarkers, Tumor analysis, Biomarkers, Tumor genetics, Cell Proliferation, Class I Phosphatidylinositol 3-Kinases, DNA Mutational Analysis, Diagnosis, Differential, Female, GTP-Binding Protein alpha Subunits, Gq-G11 genetics, Hemangioma, Cavernous pathology, Hemangiosarcoma pathology, Humans, Immunohistochemistry, Ki-67 Antigen analysis, Liver Neoplasms chemistry, Liver Neoplasms classification, Liver Neoplasms genetics, Male, Middle Aged, Mutation, Neoplasm Grading, Phosphatidylinositol 3-Kinases genetics, Predictive Value of Tests, Proto-Oncogene Proteins c-myc analysis, Terminology as Topic, Tumor Suppressor Protein p53 analysis, Vascular Neoplasms chemistry, Vascular Neoplasms classification, Vascular Neoplasms genetics, Young Adult, Liver Neoplasms pathology, Vascular Neoplasms pathology
- Abstract
Characteristic but rare vascular neoplasms in the adult liver composed of small vessels with an infiltrative border were collected from an international group of collaborators over a 5-year period (N=17). These tumors were termed hepatic small vessel neoplasm (HSVN), and the histologic differential diagnosis was angiosarcoma (AS). The average age of patients was 54years (range, 24-83years). HSVN was more common in men. The average size was 2.1cm (range, 0.2-5.5cm). Diagnosis was aided by immunohistochemical stains for vascular lineage (CD31, CD34, FLI-1), which were uniformly positive in HSVN. Immunohistochemical stains (p53, c-Myc, GLUT-1, and Ki-67) for possible malignant potential are suggestive of a benign/low-grade tumor. Capture-based next-generation sequencing (using an assay that targets the coding regions of more than 500 cancer genes) identified an activating hotspot GNAQ mutation in 2 of 3 (67%) tested samples, and one of these cases also had a hotspot mutation in PIK3CA. When compared with hepatic AS (n=10) and cavernous hemangioma (n=6), the Ki-67 proliferative index is the most helpful tool in excluding AS, which demonstrated a tumor cell proliferative index greater than 10% in all cases. Strong p53 and diffuse c-Myc staining was also significantly associated with AS but not with HSVN or cavernous hemangioma. There have been no cases with rupture/hemorrhage, disseminated intravascular coagulation, or Kasabach-Merritt syndrome. Thus far, there has been no metastasis or recurrence of HSVN, but complete resection and close clinical follow-up are recommended because the outcome remains unknown., Competing Interests: ☆ Competing interests: The authors declare no conflicts of interest., (Copyright © 2016 Elsevier Inc. All rights reserved.)
- Published
- 2016
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35. Characterization of Colorectal Cancer Development in Apc (min/+) Mice.
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Nalbantoglu I, Blanc V, and Davidson NO
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- Animals, Bile Acids and Salts toxicity, Colorectal Neoplasms genetics, Dextran Sulfate toxicity, Diet, High-Fat adverse effects, Disease Models, Animal, Female, Humans, Male, Mice, Mice, Inbred C57BL, Adenomatous Polyposis Coli Protein genetics, Colorectal Neoplasms chemically induced, Colorectal Neoplasms pathology
- Abstract
The Apc (min/+) mouse provides an excellent experimental model for studying genetic, environmental, and therapeutic aspects of intestinal neoplasia in humans. In this chapter, we will describe techniques for studying colon cancer development in Apc (min/+) mice on C57BL/6J (B6) background, focusing on the roles of environmental modifiers, including Dextran Sulfate Sodium (DSS), high fat diet, and bile acid supplementation in the context of experimental colorectal cancer. This chapter also includes protocols describing extraction and purification of DSS-contaminated RNA, as well as sampling, harvesting, and tissue processing. The common pathologic lesions encountered in these animals are described in detail.
- Published
- 2016
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36. Outcomes Using Grafts from Donors after Cardiac Death.
- Author
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Doyle MB, Collins K, Vachharajani N, Lowell JA, Shenoy S, Nalbantoglu I, Byrnes K, Garonzik-Wang J, Wellen J, Lin Y, and Chapman WC
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Brain Death, Child, End Stage Liver Disease mortality, Female, Follow-Up Studies, Graft Survival, Humans, Male, Matched-Pair Analysis, Middle Aged, Retrospective Studies, Survival Analysis, Treatment Outcome, Young Adult, Death, Donor Selection methods, End Stage Liver Disease surgery, Liver Transplantation mortality, Tissue Donors
- Abstract
Background: Previous reports suggest that donation after cardiac death (DCD) liver grafts have increased primary nonfunction (PNF) and cholangiopathy thought to be due to the graft warm ischemia before cold flushing., Study Design: In this single-center, retrospective study, 866 adult liver transplantations were performed at our institution from January 2005 to August 2014. Forty-nine (5.7%) patients received DCD donor grafts. The 49 DCD graft recipients were compared with all recipients of donation after brain death donor (DBD) grafts and to a donor and recipient age- and size-matched cohort., Results: The DCD donors were younger (age 28, range 8 to 60 years) than non-DCD (age 44.3, range 9 to 80 years) (p < 0.0001), with similar recipient age. The mean laboratory Model for End-Stage Liver Disease (MELD) was lower in DCD recipients (18.7 vs 22.2, p = 0.03). Mean cold and warm ischemia times were similar. Median ICU and hospital stay were 2 days and 7.5 days in both groups (p = 0.37). Median follow-ups were 4.0 and 3.4 years, respectively. Long-term outcomes were similar between groups, with similar 1-, 3- and 5-year patient and graft survivals (p = 0.59). Four (8.5%) recipients developed ischemic cholangiopathy (IC) at 2, 3, 6, and 8 months. Primary nonfunction and hepatic artery thrombosis did not occur in any patient in the DCD group. Acute kidney injury was more common with DCD grafts (16.3% of DCD recipients required dialysis vs 4.1% of DBD recipients, p = 0.01). An increased donor age (>40 years) was shown to increase the risk of IC (p = 0.006)., Conclusions: Careful selection of DCD donors can provide suitable donors, with results of liver transplantation comparable to those with standard brain dead donors., (Copyright © 2015 American College of Surgeons. Published by Elsevier Inc. All rights reserved.)
- Published
- 2015
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37. IgG4-related sclerosing cholangitis in the absence of autoimmune pancreatitis mimicking extrahepatic cholangiocarcinoma.
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Lin J, Cummings OW, Greenson JK, House MG, Liu X, Nalbantoglu I, Pai R, Davidson DD, and Reuss SA
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- Aged, Aged, 80 and over, Autoimmune Diseases complications, Cholangitis, Sclerosing surgery, Diagnostic Errors, Humans, Jaundice, Obstructive etiology, Male, Middle Aged, Nystagmus, Pathologic etiology, Pancreatitis complications, Pancreatitis immunology, Weight Loss, Bile Duct Neoplasms diagnosis, Bile Ducts, Extrahepatic chemistry, Cholangiocarcinoma diagnosis, Cholangitis, Sclerosing immunology, Cholangitis, Sclerosing pathology, Immunoglobulin G analysis
- Abstract
Aims: IgG4-related sclerosing cholangitis in extrahepatic bile ducts in the absence of autoimmune pancreatitis (AIP) is rare and is poorly studied. Herein, we present the clinicopathological features of four cases of IgG4-related sclerosing cholangitis., Methods and Results: The clinicopathological features of IgG4-related sclerosing cholangitis were compared with those of IgG4-related sclerosing cholangitis with AIP (n = 7), extrahepatic cholangiocarcinoma (n = 29), primary sclerosing cholangitis (n = 40), and secondary sclerosing cholangitis (n = 12). Several histomorphologic features distinguish IgG4-related sclerosing cholangitis, including a marked degree of bile duct injury, a higher percentage of lymphoid follicle formation, a higher percentage of perineuritis, and a more diffuse and dense lymphoplasmacytic infiltrate. All four cases of IgG4-related sclerosing cholangitis occurred exclusively in males. Of these cases, none had IgG4 serology checked preoperatively, and all had a preoperative diagnosis of extrahepatic cholangiocarcinoma. Clinical follow-up was available in 2 patients with a mean time of 11 months. Follow-up confirmed the benign course of the disease as the patients showed no evidence of relapse. IgG4-related conditions, including sclerosing cholecystitis and retroperitoneal fibrosis, were noted in three patients., Conclusions: IgG4-related sclerosing cholangitis in the absence of AIP presents as a distinct and under-recognized disease that mimics extrahepatic cholangiocarcinoma clinically. Awareness of this entity is essential to avoid erroneously diagnosing malignancy. The current threshold of 10 IgG4-positive plasma cells/high-power field (HPF) in the biopsy is not specific enough to exclude cholangiocarcinoma. Therefore, we suggest the diagnostic cut-off to be 50 IgG4-positive plasma cells/HPF in the biopsy.
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- 2015
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38. Advanced colorectal adenomas in patients under 45 years of age are mostly sporadic.
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Kushnir VM, Nalbantoglu I, Watson R, Goodwin J, Safar E, Chokshi RV, Azar RR, and Davidson NO
- Subjects
- Adenoma epidemiology, Adolescent, Adult, Colorectal Neoplasms epidemiology, Female, Gastrointestinal Hemorrhage etiology, Humans, Male, Middle Aged, Retrospective Studies, Risk Factors, Young Adult, Adenoma pathology, Colorectal Neoplasms pathology
- Abstract
Background: The presence of advanced adenomas in younger individuals is a criterion for Lynch syndrome (LS). However, the utility of screening advanced adenomas for loss of mismatch repair (MMR) protein expression to identify suspected LS remains unclear., Aims: Determine the prevalence of MMR defects to understand whether these patients harbor a defined genetic risk for CRC., Methods: The study cohort included adult patients ≤45 years of age with advanced adenomas (villous histology, ≥1 cm in diameter, ≥3 polyps of any size) endoscopically removed between 2001 and 2011. Clinical records were reviewed along with detailed pathological review and immunohistochemical MMR analysis., Results: A total of 76 (40.1 % male, age 40.6 ± 5.4 years) patients met inclusion and exclusion criteria. Indications for colonoscopy were gastrointestinal (GI) bleeding 39 (51.3 %), CRC in a first-degree relative 17 (22.4 %) and somatic GI symptoms 20 (26.3 %). Index colonoscopy revealed a median of 1 adenoma (range 1-4), mean diameter of 12.9 ± 7.1 mm, 40 (52.6 %) with villous histology. The mean follow-up duration was 3.3 ± 2 years. Recurrent adenomas developed in 24 (31.6 %), of which 8 (10.5 %) were advanced adenomas; none of these patients developed CRC. One of 66 (1.5 %) adenomas available for immunohistochemical (IHC) testing revealed loss of MLH1 and PMS2., Conclusions: IHC screening of advanced adenomas from patients younger than 45 years of age identified potential LS in one of 64 patients. The low yield of IHC screening in this population suggests that universal IHC screening of advanced adenomas from patients younger than 45 years of age for MMR defects is not an efficient strategy for identifying LS subjects.
- Published
- 2014
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39. Histological features and severity of oxaliplatin-induced liver injury and clinical associations.
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Nalbantoglu IL, Tan BR Jr, Linehan DC, Gao F, and Brunt EM
- Subjects
- Antineoplastic Agents therapeutic use, Chemical and Drug Induced Liver Injury etiology, Chemotherapy, Adjuvant adverse effects, Colorectal Neoplasms pathology, Female, Hepatectomy, Hepatocytes pathology, Humans, Liver Neoplasms drug therapy, Liver Neoplasms secondary, Liver Neoplasms surgery, Male, Neoadjuvant Therapy adverse effects, Organoplatinum Compounds therapeutic use, Oxaliplatin, Retrospective Studies, Severity of Illness Index, Antineoplastic Agents adverse effects, Chemical and Drug Induced Liver Injury pathology, Organoplatinum Compounds adverse effects
- Abstract
Objective: Oxaliplatin, a component of chemotherapy for colorectal carcinoma liver metastases, can result in hepatic sinusoidal injury; rarely, the injury is fatal. The manifestations of injury are variable. There are no known predictors of susceptibility and outcome. A semi-quantitative system for assessing histological features in non-tumor liver was designed to compare with clinical short-term and long-term outcomes., Methods: A review of 47 patients with metastatic colorectal carcinoma who received liver resection utilizing a system for an aggregate liver injury score (0-4) included hepatocellular and sinusoidal features. Immunohistochemistry (IHC) for aberrant capillarization was included. The proliferation of hepatocytes and sinusoidal lining cells was evaluated with Ki-67 stain., Results: In total, 32 (68.1%) cases showed light microscopic lesions of oxaliplatin-induced liver injury, in which 26 were moderate to severe. Elevated preoperative aspartate aminotransferase (AST) and alkaline phosphatase levels were noted with higher injury scores (P = 0.01). Patients with higher injury scores had no significant increase in short-term postoperative complications, with one notable exception, who died of liver failure 10 months postoperatively. Increased CD34 expression was associated with higher injury scores (P = 0.00004), and abnormal AST levels (P = 0.04). Preoperative use of bevacizumab was not associated with lower injury scores. Steatosis was correlated with body mass index (P = 0.052) but not with exposure to oxaliplatin, bevacizumab or irinotecan., Conclusions: The proposed liver injury scoring system encompasses the spectrum of sinusoidal and hepatocellular lesions in oxaliplatin-induced liver injury and is correlated with serum liver enzyme levels in this group. Most patients recovered without complications during the 93-month follow-up, indicating that these lesions are reversible., (© 2014 Chinese Medical Association Shanghai Branch, Chinese Society of Gastroenterology, Renji Hospital Affiliated to Shanghai Jiaotong University School of Medicine and Wiley Publishing Asia Pty Ltd.)
- Published
- 2014
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40. Intestinal epithelial HuR modulates distinct pathways of proliferation and apoptosis and attenuates small intestinal and colonic tumor development.
- Author
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Giammanco A, Blanc V, Montenegro G, Klos C, Xie Y, Kennedy S, Luo J, Chang SH, Hla T, Nalbantoglu I, Dharmarajan S, and Davidson NO
- Subjects
- Animals, Apoptosis physiology, Cell Growth Processes physiology, Colonic Neoplasms genetics, Colonic Neoplasms metabolism, Disease Models, Animal, ELAV Proteins genetics, ELAV Proteins metabolism, Intestinal Mucosa metabolism, Intestinal Neoplasms genetics, Intestinal Neoplasms metabolism, Mice, Mice, Knockout, Colonic Neoplasms pathology, ELAV Proteins physiology, Intestinal Mucosa pathology, Intestinal Neoplasms pathology
- Abstract
HuR is a ubiquitous nucleocytoplasmic RNA-binding protein that exerts pleiotropic effects on cell growth and tumorigenesis. In this study, we explored the impact of conditional, tissue-specific genetic deletion of HuR on intestinal growth and tumorigenesis in mice. Mice lacking intestinal expression of HuR (Hur (IKO) mice) displayed reduced levels of cell proliferation in the small intestine and increased sensitivity to doxorubicin-induced acute intestinal injury, as evidenced by decreased villus height and a compensatory shift in proliferating cells. In the context of Apc(min/+) mice, a transgenic model of intestinal tumorigenesis, intestinal deletion of the HuR gene caused a three-fold decrease in tumor burden characterized by reduced proliferation, increased apoptosis, and decreased expression of transcripts encoding antiapoptotic HuR target RNAs. Similarly, Hur(IKO) mice subjected to an inflammatory colon carcinogenesis protocol [azoxymethane and dextran sodium sulfate (AOM-DSS) administration] exhibited a two-fold decrease in tumor burden. Hur(IKO) mice showed no change in ileal Asbt expression, fecal bile acid excretion, or enterohepatic pool size that might explain the phenotype. Moreover, none of the HuR targets identified in Apc(min/+)Hur(IKO) were altered in AOM-DSS-treated Hur(IKO) mice, the latter of which exhibited increased apoptosis of colonic epithelial cells, where elevation of a unique set of HuR-targeted proapoptotic factors was documented. Taken together, our results promote the concept of epithelial HuR as a contextual modifier of proapoptotic gene expression in intestinal cancers, acting independently of bile acid metabolism to promote cancer. In the small intestine, epithelial HuR promotes expression of prosurvival transcripts that support Wnt-dependent tumorigenesis, whereas in the large intestine epithelial HuR indirectly downregulates certain proapoptotic RNAs to attenuate colitis-associated cancer. Cancer Res; 74(18); 5322-35. ©2014 AACR., (©2014 American Association for Cancer Research.)
- Published
- 2014
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41. Role of liver biopsy in nonalcoholic fatty liver disease.
- Author
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Nalbantoglu IL and Brunt EM
- Subjects
- Adult, Age Factors, Animals, Carcinoma, Hepatocellular etiology, Carcinoma, Hepatocellular pathology, Child, Diagnosis, Differential, Humans, Liver Cirrhosis etiology, Liver Cirrhosis pathology, Liver Neoplasms etiology, Liver Neoplasms pathology, Non-alcoholic Fatty Liver Disease complications, Predictive Value of Tests, Prognosis, Risk Factors, Severity of Illness Index, Biopsy, Liver pathology, Non-alcoholic Fatty Liver Disease pathology
- Abstract
Nonalcoholic fatty liver disease (NAFLD), defined as abnormal accumulation (> 5%) of hepatic triglyceride without excess alcohol intake, is the most common form of chronic liver disease in adults and children in the United States. NAFLD encompasses a spectrum of histologic findings including uncomplicated steatosis, steatosis with inflammation and steatohepatitis [nonalcoholic steatohepatitis (NASH)]; the latter can advance to cirrhosis and hepatocellular carcinoma. NASH is currently accepted as the hepatic manifestation of the set of cardiovascular risk factors collectively known as metabolic syndrome. In 1999 a system for histologic grading and staging for NASH was proposed; this was revised by the NASH Clinical Research Network in 2005 for the entire spectrum of lesions in NAFLD, including the lesions and patterns of pediatric NAFLD, and for application in clinical research trials. Diagnosis remains distinct from grade and stage. A recent European proposal separates steatosis from activity to derive a numeric diagnosis of NASH. Even though there have been promising advancements in non-invasive testing, these tests are not yet detailed enough to replace the full range of findings provided by liver biopsy evaluation. Limitations of biopsy are acknowledged, but liver biopsy remains the "gold standard" for diagnosis and determination of amounts of necroinflammatory activity, and location of fibrosis, as well as remodeling of the parenchyma in NASH. This review focuses on the specific histologic lesions of NAFLD and NASH, grading and staging, differential diagnoses to be considered, and the continuing role of the liver biopsy in this important liver disease.
- Published
- 2014
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42. Differential expression of miR-31 between inflammatory bowel disease and microscopic colitis.
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Zhang C, Zhao Z, Osman H, Watson R, Nalbantoglu I, and Lin J
- Subjects
- Adult, Aged, Aged, 80 and over, Biomarkers metabolism, Colitis, Microscopic diagnosis, Colitis, Microscopic genetics, Colitis, Ulcerative diagnosis, Colitis, Ulcerative genetics, Crohn Disease diagnosis, Crohn Disease genetics, Female, Humans, Male, MicroRNAs genetics, Middle Aged, Colitis, Microscopic metabolism, Colitis, Ulcerative metabolism, Crohn Disease metabolism, MicroRNAs metabolism
- Abstract
Background: Idiopathic inflammatory bowel disease (IBD) and microscopic colitis (MC) are distinct entities. However, patients with intermittent episodes of IBD and MC that are encountered in a clinical setting puzzle clinicians and pathologists. This study examined whether microRNA assisted in the classification of IBD and MC., Design: Small RNA was extracted from formalin-fixed, paraffin-embedded (FFPE) colon tissue and qRT-PCR was performed from cohorts of normal control (n=38), ulcerative colitis (n=36), Crohns disease (n=26), collagenous colitis (n=36), lymphocytic colitis (n=30), and patients with intermittent features of IBD and MC (n=6)., Results: Differential expression of miR-31 distinguished IBD (ulcerative colitis and Crohns disease) from MC (collagenous colitis and lymphocytic colitis), confirming the specificity of miR-31 expression in IBD (P=0.00001). In addition, expression of miR-31 was increased in collagenous colitis compared to that of lymphocytic colitis (P=0.010). Among 6 patients with alternating episodes of IBD and MC, one patient had matching miR-31 expression in different phases (lymphocytic colitis to ulcerative colitis, and then back to collagenous colitis). The other 5 patients had MC-like expression patterns in both MC and IBD episodes., Conclusion: In summary, IBD and MC have distinct miR-31 expression pattern. Therefore, miR-31 might be used as a biomarker to distinguish between IBD and MC in FFPE colonic tissue. In addition, miR-31 is differentially expressed in colonic tissue between lymphocytic colitis and collagenous colitis, suggesting them of separate disease processes. Finally, patients with alternating IBD and MC episodes represent a diverse group. Among them, the majority demonstrates MC-like miR-31 expression pattern in MC phases, which seems unlikely to support the speculation of MC as an inactive form of IBD. Although the mechanisms deserve further investigation, microRNA is a potentially useful biomarker to differentiate IBD and MC.
- Published
- 2014
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43. Liver fatty acid-binding protein (L-Fabp) modifies intestinal fatty acid composition and adenoma formation in ApcMin/+ mice.
- Author
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Dharmarajan S, Newberry EP, Montenegro G, Nalbantoglu I, Davis VR, Clanahan MJ, Blanc V, Xie Y, Luo J, Fleshman JW Jr, Kennedy S, and Davidson NO
- Subjects
- Animals, Cell Proliferation, Dietary Fats, Dinoprostone metabolism, Female, Gene Deletion, Genotype, Immunohistochemistry, Lipids chemistry, Mice, Mice, Transgenic, Polymerase Chain Reaction, RNA, Messenger metabolism, Signal Transduction, Time Factors, Adenoma metabolism, Fatty Acid-Binding Proteins genetics, Fatty Acid-Binding Proteins metabolism, Fatty Acids metabolism, Gene Expression Regulation, Neoplastic, Intestinal Mucosa metabolism
- Abstract
Evidence suggests a relationship between dietary fat intake, obesity, and colorectal cancer, implying a role for fatty acid metabolism in intestinal tumorigenesis that is incompletely understood. Liver fatty acid-binding protein (L-Fabp), a dominant intestinal fatty acid-binding protein, regulates intestinal fatty acid trafficking and metabolism, and L-Fabp deletion attenuates diet-induced obesity. Here, we examined whether changes in intestinal fatty acid metabolism following L-Fabp deletion modify adenoma development in Apc(Min)(/+) mice. Compound L-Fabp(-/-)Apc(Min)(/+) mice were generated and fed a 10% fat diet balanced equally between saturated, monounsaturated, and polyunsaturated fat. L-Fabp(-/-)Apc(Min)(/+) mice displayed significant reductions in adenoma number and total polyp area compared with Apc(Min)(/+)controls, reflecting a significant shift in distribution toward smaller polyps. Adenomas from L-Fabp(-/-)Apc(Min)(/+) mice exhibited reductions in cellular proliferation, high-grade dysplasia, and nuclear β-catenin translocation. Intestinal fatty acid content was increased in L-Fabp(-/-)Apc(Min)(/+) mice, and lipidomic profiling of intestinal mucosa revealed significant shifts to polyunsaturated fatty acid species with reduced saturated fatty acid species. L-Fabp(-/-)Apc(Min)(/+) mice also showed corresponding changes in mRNA expression of enzymes involved in fatty acid elongation and desaturation. Furthermore, adenomas from L-Fabp(-/-)Apc(Min)(/+) mice displayed significant reductions in mRNA abundance of nuclear hormone receptors involved in cellular proliferation and in enzymes involved in lipogenesis. These findings collectively implicate L-Fabp as an important genetic modifier of intestinal tumorigenesis, and identify fatty acid trafficking and metabolic compartmentalization as an important pathway linking dietary fat intake, obesity, and intestinal tumor formation.
- Published
- 2013
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44. Intestine-Specific Mttp Deletion Increases the Severity of Experimental Colitis and Leads to Greater Tumor Burden in a Model of Colitis Associated Cancer.
- Author
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Xie Y, Matsumoto H, Nalbantoglu I, Kerr TA, Luo J, Rubin DC, Kennedy S, and Davidson NO
- Subjects
- Animals, Azoxymethane toxicity, Carrier Proteins metabolism, Cells, Cultured, Colitis chemically induced, Colitis complications, Colon metabolism, Colon pathology, Colonic Neoplasms genetics, Dextran Sulfate toxicity, Disease Models, Animal, Feces chemistry, Interleukin-17 genetics, Interleukin-17 metabolism, Interleukin-1beta genetics, Interleukin-1beta metabolism, Mice, Mice, Inbred C57BL, Mice, Transgenic, Myofibroblasts cytology, Myofibroblasts metabolism, Severity of Illness Index, Tumor Burden genetics, Tumor Necrosis Factor-alpha blood, Carrier Proteins genetics, Colitis pathology, Colonic Neoplasms pathology, Intestines pathology
- Abstract
Background: Gut derived lipid factors have been implicated in systemic injury and inflammation but the precise pathways involved are unknown. In addition, dietary fat intake and obesity are independent risk factors for the development of colorectal cancer. Here we studied the severity of experimental colitis and the development of colitis associated cancer (CAC) in mice with an inducible block in chylomicron secretion and fat malabsorption, following intestine-specific deletion of microsomal triglyceride transfer protein (Mttp-IKO)., Methodology/principal Findings: Mttp-IKO mice exhibited more severe injury with ∼90% mortality following dextran sodium sulfate (DSS) induced colitis, compared to <20% in controls. Intestinal permeability was increased in Mttp-IKO mice compared to controls, both at baseline and after DSS administration, in association with increased circulating levels of TNFα. DSS treatment increased colonic mRNA expression of IL-1β and IL-17A as well as inflammasome expression in both genotypes, but the abundance of TNFα was selectively increased in DSS treated Mttp-IKO mice. There was a 2-fold increase in colonic tumor burden in Mttp-IKO mice following azoxymethane/DSS treatment, which was associated with increased colonic inflammation as well as alterations in cytokine expression. To examine the pathways by which alterations in fatty acid abundance might interact with cytokine signaling to regulate colonic epithelial growth, we used primary murine myofibroblasts to demonstrate that palmitate induced expression of amphiregulin and epiregulin and augmented the increase in both of these growth mediators when added to IL-1βor to TNFα., Conclusions: These studies demonstrate that Mttp-IKO mice, despite absorbing virtually no dietary fat, exhibit augmented fatty acid dependent signaling that in turn exacerbates colonic injury and increases tumor formation.
- Published
- 2013
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45. Hepatic hemangiopericytoma/solitary fibrous tumor: a review of our current understanding and case study.
- Author
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Bokshan SL, Doyle M, Becker N, Nalbantoglu I, and Chapman WC
- Subjects
- Biopsy, Fine-Needle, Hemangiopericytoma diagnostic imaging, Hemangiopericytoma genetics, Hemangiopericytoma metabolism, Humans, Immunohistochemistry, Insulin-Like Growth Factor II metabolism, Liver Neoplasms diagnostic imaging, Liver Neoplasms genetics, Liver Neoplasms metabolism, Magnetic Resonance Imaging, Male, Middle Aged, Prognosis, Solitary Fibrous Tumors diagnostic imaging, Solitary Fibrous Tumors genetics, Solitary Fibrous Tumors metabolism, Tomography, X-Ray Computed, Venae Cavae surgery, Hemangiopericytoma pathology, Liver Neoplasms pathology, Solitary Fibrous Tumors pathology
- Abstract
Introduction: In 2002, the World Health Organization reclassified the soft tissue tumors known as hemangiopericytoma (HPC) as a variant of solitary fibrous tumor (SFT). As this classification system is still debated and has not been universally applied, the following account will provide an updated review of our understanding of those tumors still classified as HPC in the literature with special emphasis on hepatic HPC/SFT. HPC is a soft tissue neoplasm of mesenchymal origin first described by Stout and Murray in 1942. HPC constitutes 1 % of all vascular neoplasms and has been thought to coexist with trauma, prolonged steroid use, and hypertension., Clinical Overview: Although its presentation may be variable, intrahepatic HPC often presents with the patient's increasing awareness of a painless mass. Marked hypoglycemia may also accompany the neoplasm. Recent evidence suggests that uncontrolled growth may result from a loss of imprinting with overproduction of IGF-II in addition to alternative promoter usage. Diagnostic modalities including imaging, biopsy, and biochemical assays may be used to detect the presence of HPC. As most lesions are benign and slow growing, the prognosis is relatively favorable with 10-year survival between 54 and 70 %., Management: Current mainstays of treatment include hepatic resection when possible especially with the use of adjuvant radiotherapy. Chemotherapeutic approaches have been poorly studied and are generally reserved for inoperable cases. Antiangiogenic compounds such as temozolomide and bevacizumab provide an exciting avenue of treatment. Finally, a case study will be reviewed highlighting diagnosis, treatment, and spectrum nature of hepatic HPC.
- Published
- 2012
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46. Transient inability to manage proteobacteria promotes chronic gut inflammation in TLR5-deficient mice.
- Author
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Carvalho FA, Koren O, Goodrich JK, Johansson ME, Nalbantoglu I, Aitken JD, Su Y, Chassaing B, Walters WA, González A, Clemente JC, Cullender TC, Barnich N, Darfeuille-Michaud A, Vijay-Kumar M, Knight R, Ley RE, and Gewirtz AT
- Subjects
- Animals, Colitis genetics, Colitis immunology, Enterobacteriaceae physiology, Female, Gastrointestinal Tract immunology, Humans, Male, Metagenome, Mice, Mice, Inbred C57BL, Mice, Knockout, Toll-Like Receptor 5 deficiency, Toll-Like Receptor 5 genetics, Colitis microbiology, Gastrointestinal Tract microbiology, Proteobacteria physiology, Toll-Like Receptor 5 immunology
- Abstract
Colitis results from breakdown of homeostasis between intestinal microbiota and the mucosal immune system, with both environmental and genetic influencing factors. Flagellin receptor TLR5-deficient mice (T5KO) display elevated intestinal proinflammatory gene expression and colitis with incomplete penetrance, providing a genetically sensitized system to study the contribution of microbiota to driving colitis. Both colitic and noncolitic T5KO exhibited transiently unstable microbiotas, with lasting differences in colitic T5KO, while their noncolitic siblings stabilized their microbiotas to resemble wild-type mice. Transient high levels of proteobacteria, especially enterobacteria species including E. coli, observed in close proximity to the gut epithelium were a striking feature of colitic microbiota. A Crohn's disease-associated E. coli strain induced chronic colitis in T5KO, which persisted well after the exogenously introduced bacterial species had been eliminated. Thus, an innate immune deficiency can result in unstable gut microbiota associated with low-grade inflammation, and harboring proteobacteria can drive and/or instigate chronic colitis., (Copyright © 2012 Elsevier Inc. All rights reserved.)
- Published
- 2012
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47. The expression of interferon receptor α/β in human pancreatic cancer in nude mice is essential for tumor response to interferon α treatment.
- Author
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Saidi RF, Ahad A, Tilak J, Nalbantoglu I, and Jacobs MJ
- Subjects
- Animals, Antimetabolites, Antineoplastic therapeutic use, Carcinoma drug therapy, Cell Line, Tumor, Deoxycytidine analogs & derivatives, Deoxycytidine therapeutic use, Humans, Male, Mice, Mice, Nude, Pancreatic Neoplasms drug therapy, Gemcitabine, Carcinoma metabolism, Immunologic Factors therapeutic use, Interferon-alpha therapeutic use, Pancreatic Neoplasms metabolism, Receptor, Interferon alpha-beta metabolism
- Abstract
Background: Adjuvant interferon based chemoradiation has rendered promising results against pancreatic cancer. This study evaluated the in vivo effect of interferon α on two human pancreatic carcinoma cell lines implanted in nude., Material and Methods: MiaPaCa-2 expressed the interferon α/β receptor and Panc-1 cells did not. Regimen I consisted of intraperitoneal single-agent gemcitabine and Regimen II consisted of IFN-α and gemcitabine biweekly for 30 d., Results: Regimen I and II significantly decreased median tumor volume compared with control mice (P < 0.001). However, MiaPaCa-2 showed a more dramatic response to Regimen II compared with Panc-1 implanted mice. MiaPaCa-2 and treated with Regimen II showed less metastasis and less local invasion compared with Panc-1 treated with same regimen. Regimen II was more effective on MiaPaCa-2 compared with Regimen I (P < 0.001). There were no differences between Regimens I and II in the Panc-1 group., Conclusions: Treatment of human pancreatic cancer in nude mice with interferon α and gemcitabine was associated with a reduction in tumor volume. This process was more prominent in the cells that express the interferon receptors., (Copyright © 2012 Elsevier Inc. All rights reserved.)
- Published
- 2012
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48. Interleukin-1β (IL-1β) promotes susceptibility of Toll-like receptor 5 (TLR5) deficient mice to colitis.
- Author
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Carvalho FA, Nalbantoglu I, Ortega-Fernandez S, Aitken JD, Su Y, Koren O, Walters WA, Knight R, Ley RE, Vijay-Kumar M, and Gewirtz AT
- Subjects
- Animals, Antibodies, Monoclonal immunology, Cecum microbiology, Colitis, Ulcerative genetics, Colitis, Ulcerative microbiology, Disease Models, Animal, Disease Susceptibility, Gene Expression Profiling methods, Male, Metagenome immunology, Mice, Mice, Knockout, Myeloid Differentiation Factor 88, Receptors, Interleukin-10 immunology, Reverse Transcriptase Polymerase Chain Reaction, Signal Transduction genetics, Signal Transduction immunology, Toll-Like Receptor 5 immunology, Colitis, Ulcerative immunology, Interleukin-1beta physiology, Toll-Like Receptor 5 deficiency
- Abstract
Background: The extent to which numerous strains of genetically engineered mice, including mice lacking Toll-like receptor 5 (T5KO), display colitis is environment dependent. Gut microbiota underlie much of the variation in phenotype. Accordingly, embryonic rederivation of T5KO mice ameliorated their spontaneous colitis despite only partially correcting elevated proinflammatory gene expression. It was postulated that endogenous anti-inflammatory pathways mediated the absence of overt inflammation in these mice when their gut microbiota were reset. Consequently, it was hypothesised that neutralisation of the anti-inflammatory cytokine interleukin 10 (IL-10) might induce uniform colitis in T5KO mice, and thus provide a practical means to study mechanisms underlying their inflammation., Methods: Two distinct strains of non-colitic T5KO mice, as well as mice lacking MyD88, Toll-like receptor 4 (TLR4), IL-1 receptor (IL-1R) and various double knockouts (DKOs) were treated weekly for 4 weeks with 1 mg/mouse of IL-10 receptor neutralising antibody (IL-10R mAb) and colitis assayed 1 week later. The composition of the caecal microbiota was determined by 454 pyrosequencing of 16S rRNA genes., Results: Anti-IL-10R mAb treatment led to severe uniform intestinal inflammation in both strains of T5KO mice. Such neutralisation of IL-10 signalling did not cause colitis in wild-type littermates nor mice lacking TLR4, MyD88 or IL-1R. The susceptibility of T5KO mice to this colitis model was not rescued by absence of TLR4 in that T4/T5 DKO mice displayed severe colitis in response to anti-IL-10R mAb treatment. IL-1β signalling was crucial for this colitis model in that IL-1R/T5 DKOs were completely protected from colitis in response to IL-10R mAb treatment. Lastly, it was observed that blockade of IL-10R function was associated with changes in the composition of gut microbiota, which were observed in mice that were susceptible and resistant to IL-10R mAb-induced colitis., Conclusion: Regardless of whether they harbour a colitogenic microbiota, loss of TLR5 predisposes mice to colitis triggered by immune dysregulation via an IL-1β-dependent pathway.
- Published
- 2012
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49. Tumor regression following DNA vaccination and regulatory T cell depletion in neu transgenic mice leads to an increased risk for autoimmunity.
- Author
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Jacob JB, Kong YC, Nalbantoglu I, Snower DP, and Wei WZ
- Subjects
- Animals, Cancer Vaccines genetics, Cancer Vaccines immunology, Cell Line, Tumor, Female, Genetic Predisposition to Disease, Mammary Neoplasms, Experimental immunology, Mice, Mice, Inbred BALB C, Mice, Transgenic, NIH 3T3 Cells, Rats, Receptor, ErbB-2 administration & dosage, Receptor, ErbB-2 immunology, Remission Induction, T-Lymphocytes, Regulatory pathology, Thyroglobulin administration & dosage, Thyroglobulin genetics, Thyroglobulin immunology, Thyroiditis, Autoimmune immunology, Thyroiditis, Autoimmune prevention & control, Vaccines, DNA immunology, Cancer Vaccines administration & dosage, Lymphocyte Depletion methods, Mammary Neoplasms, Experimental genetics, Mammary Neoplasms, Experimental prevention & control, Receptor, ErbB-2 genetics, T-Lymphocytes, Regulatory immunology, Thyroiditis, Autoimmune genetics, Vaccines, DNA administration & dosage
- Abstract
Modulation of the immune system to amplify anti-tumor immunity carries the risk of developing autoimmune diseases, including hypothyroidism, as seen with cancer patients undergoing clinical trials for immunotherapeutic regimens. Although there is a tendency to view autoimmunity as a positive indicator for cancer immunotherapy, some autoimmune manifestations can be life-threatening and necessitate prolonged medical intervention or removal from trial. We have established murine test models to assess such risks by monitoring, simultaneously, the immune reactivity to tumor-associated rat erbB-2 (neu) and another self Ag, mouse thyroglobulin (mTg). We previously reported that in wild-type, thyroiditis-resistant BALB/c mice that underwent regression of neu(+) TUBO tumors following regulatory T cell (Treg) depletion, immune responses to rat neu and mTg with resultant autoimmune thyroiditis (EAT) were both enhanced. In this study, we tested the balance between tumor immunity and autoimmunity in neu-transgenic BALB NeuT female mice. First, growth and progression of neu(+) tumor were compared in neu tolerant mice treated with either CD25 mAb to deplete Tregs and/or DNA vaccination. Only Treg depletion followed by neu DNA vaccination abrogated tolerance to neu, resulting in complete regression of neu(+) tumors, as well as long-term protection from spontaneous tumorigenesis in 58% of mice. The risk of developing EAT was then assessed by incorporated mTg immunization with or without LPS as adjuvant. In mice with induced tumor regression, mTg response was enhanced with modest increases in EAT development. Therefore, tumor regression induced by Treg depletion and DNA vaccination can exacerbate autoimmunity, which warrants close monitoring during immunotherapy.
- Published
- 2009
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50. The effect of methylprednisolone on warm ischemia-reperfusion injury in the liver.
- Author
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Saidi RF, Chang J, Verb S, Brooks S, Nalbantoglu I, Adsay V, and Jacobs MJ
- Subjects
- Animals, Body Weight, Disease Models, Animal, Liver Diseases classification, Liver Diseases complications, Male, Obesity complications, Rats, Rats, Sprague-Dawley, Reference Values, Reperfusion Injury classification, Reperfusion Injury complications, Treatment Outcome, Anti-Inflammatory Agents therapeutic use, Liver Diseases drug therapy, Methylprednisolone therapeutic use, Reperfusion Injury drug therapy
- Abstract
Background: Liver ischemia-reperfusion (I-R) injury is a well-known cause of morbidity and mortality following liver surgery and transplantation. Further investigation is warranted to identify measures that reduce the untoward sequelae of liver ischemia., Methods: Male Sprague-Dawley rats (wild-type) and Zucker rats (with hepatic steatosis) were subjected to 75 minutes of 70% hepatic ischemia and 3 hours of reperfusion. The ischemic periods were based on protocols of either continuous clamping (CC) or ischemic preconditioning (IP). Prior to ischemia induction, rats were pretreated with intravenous methylprednisolone (MP; 2 mg/kg) or normal saline. Warm I-R injury was evaluated using serum levels of aspartate aminotransferase (AST), serum interleukin-6 (IL-6), and hematoxylin and eosin staining., Results: Histology, serum IL-6, and AST release revealed that MP treatment provided significant protection as compared with ischemic controls (both CC and IP groups) only in the normal, not steatotic, livers. The inflammatory response was considerably reduced in MP groups with normal livers but not in steatotic livers. In general, the IP groups showed decreased I-R injury compared to the CC group. However, MP was able to further reduce I-R injury only in normal, not steatotic, livers., Conclusions: MP attenuated the postischemic and inflammatory response in the normal, and not steatotic, livers. MP pretreatment might be effective in reducing warm I-R injury to livers without steatosis. The mechanism of I-R-related hepatocellular damage in steatotic liver is different than in normal liver.
- Published
- 2007
- Full Text
- View/download PDF
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