1. ScRNA-Seq Analyses Define the Role of GATA3 in iNKT Cell Effector Lineage Differentiation.
- Author
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Tai TS, Yang HY, Chuang WC, Huang YW, Ho IC, Tsai CC, and Chuang YT
- Subjects
- Animals, Mice, Mice, Inbred C57BL, RNA-Seq, Single-Cell Analysis, Mice, Knockout, Single-Cell Gene Expression Analysis, GATA3 Transcription Factor metabolism, GATA3 Transcription Factor genetics, Natural Killer T-Cells cytology, Natural Killer T-Cells metabolism, Cell Differentiation genetics, Cell Lineage genetics
- Abstract
While the transcription factor GATA-3 is well-established for its crucial role in T cell development, its specific influence on invariant natural killer T (iNKT) cells remains relatively unexplored. Using flow cytometry and single-cell transcriptomic analysis, we demonstrated that GATA-3 deficiency in mice leads to the absence of iNKT2 and iNKT17 cell subsets, as well as an altered distribution of iNKT1 cells. Thymic iNKT cells lacking GATA-3 exhibited diminished expression of PLZF and T-bet, key transcription factors involved in iNKT cell differentiation, and reduced production of Th2, Th17, and cytotoxic effector molecules. Single-cell transcriptomics revealed a comprehensive absence of iNKT17 cells, a substantial reduction in iNKT2 cells, and an increase in iNKT1 cells in GATA-3-deficient thymi. Differential expression analysis highlighted the regulatory role of GATA-3 in T cell activation signaling and altered expression of genes critical for iNKT cell differentiation, such as Icos , Cd127 , Eomes , and Zbtb16 . Notably, restoration of Icos, but not Cd127, expression could rescue iNKT cell development in GATA-3-deficient mice. In conclusion, our study demonstrates the pivotal role of GATA-3 in orchestrating iNKT cell effector lineage differentiation through the regulation of T cell activation pathways and Icos expression, providing insights into the molecular mechanisms governing iNKT cell development and function.
- Published
- 2024
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