26 results on '"Nicolaie MA"'
Search Results
2. Vertical modelling: Analysis of competing risks data with missing causes of failure
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Nicolaie, MA, primary, van Houwelingen, HC, additional, and Putter, H, additional
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- 2011
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3. Tailoring columnar microstructure of axial suspension plasma sprayed TBCs for superior thermal shock performance
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Ashish Ganvir, Shrikant Joshi, Nicolaie Markocsan, and Robert Vassen
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Materials of engineering and construction. Mechanics of materials ,TA401-492 - Abstract
This paper investigates the thermal shock behavior of thermal barrier coatings (TBCs) produced by axial suspension plasma spraying (ASPS). TBCs with different columnar microstructures were subjected to cyclic thermal shock testing in a burner rig. Failure analysis of these TBCs revealed a clear relationship between lifetime and porosity. However, tailoring the microstructure of these TBCs for enhanced durability is challenging due to their inherently wide pore size distribution (ranging from few nanometers up to few tens of micrometers). This study reveals that pores with different length scales play varying roles in influencing TBC durability. Fracture toughness shows a strong correlation with the lifetime of various ASPS TBCs and is found to be the prominent life determining factor. Based on the results, an understanding-based design philosophy for tailoring of the columnar microstructure of ASPS TBCs for enhanced durability under cyclic thermal shock loading is proposed. Keywords: Suspension plasma spraying, Thermal barrier coatings, Thermal shock lifetime, Superior performance, Pore size distribution, Fracture toughness
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- 2018
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4. Research and Science Today No. 2(8)/2014
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Cătălin TECUCIANU, Crucița-Loredana BACIU, Elena-Steluţa DINU, Teodora DOBRE, Emilia - Elena CLUCERESCU (TĂNASE), Filip NALASKOWSKI, Andreea Emilia DUŢĂ, Ion PANAIT, Paul DUŢĂ, Flavius-Cristian MĂRCĂU, Silvian-Emanuel MAN, Răzvan MUNTEANU, Crina SOROIU, Diana Catalina CAZANGIU, Natalia FURTUNA, Nicolae (MĂNESCU) RALUCA, Nedelcu ANIŞOR, Traian Eugen BOLFA, Iulia BOGHIRNEA, Ion Cristinel RUJAN, Dana VULPAȘU, Dagna DEJNA, Elena BRAN, Nicolaie MĂNESCU, Marin AURELIA CAMELIA, Voicu TATIANA, Răzvan BRAN, Raul Constantin TĂNASE, Cosmin CIORA, Mircea DICULESCU, Raluca Ioana TELEANU, Magdalena SANDU, Daniel Mihai TELEANU, Smaranda NIȚĂ, Dan Vasile POP, Marius TEODORESCU, Daniela RADU, and Iulia SAVU
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international relations ,legal sciences ,administrative sciences ,social sciences ,engineering ,medical sciences ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
RESEARCH AND SCIENCE TODAY is a biannual science journal established in 2011. The journal is an informational platform that publishes assessment articles and the results of various scientific research carried out by academics. We provide the authors with the opportunity to create and/or perfect their science writing skills. Thus, each issue of the journal (two per year and at least two supplements) will contain professional articles from any academic field, authored by domestic and international academics. The goal of this journal is to pass on relevant information to undergraduate, graduate, and post-graduate students as well as to fellow academics and researchers; the topics covered are unlimited, considering its multi-disciplinary profile. Regarding the national and international visibility of Research and Science Today, it is indexed in over 30 international databases (IDB) and is present in over 200 online libraries and catalogues; therefore, anybody can easily consult the articles featured in each issue by accessing the databases or simply the website.
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- 2014
5. Research and Science Today Supplement No. 1/2014
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Elena-Steluţa DINU, Elena - Roxana DOBRIŢOIU, Raul Constantin TĂNASE, Alina BUZĂIANU, Andreea Emilia DUȚĂ, Flavius-Cristian MĂRCĂU, Ion PANAIT, Paul DUȚĂ, Magda Simona SCUTARU, Nicolaie MĂNESCU, Dragoș DAVIȚOIU, Laura MANDA, Florin CHIRCULESCU, Diana EPURE, Mărgărita MATEI, Smaranda NIȚĂ, Magda SANDU, Daniel TELEANU, and Raluca TELEANU
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international relations ,social sciences ,history ,medicine ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
RESEARCH AND SCIENCE TODAY is a biannual science journal established in 2011. The journal is an informational platform that publishes assessment articles and the results of various scientific research carried out by academics. We provide the authors with the opportunity to create and/or perfect their science writing skills. Thus, each issue of the journal (two per year and at least two supplements) will contain professional articles from any academic field, authored by domestic and international academics. The goal of this journal is to pass on relevant information to undergraduate, graduate, and post-graduate students as well as to fellow academics and researchers; the topics covered are unlimited, considering its multi-disciplinary profile. Regarding the national and international visibility of Research and Science Today, it is indexed in over 30 international databases (IDB) and is present in over 200 online libraries and catalogues; therefore, anybody can easily consult the articles featured in each issue by accessing the databases or simply the website.
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- 2014
6. Research and Science Today No. 1(7)/2014
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Alexandra ANDOR, Laura SASU, Alina BUZĂIANU, Andreea Emilia DUȚĂ, Diana-Gabriela REIANU, Ion PANAIT, Marius Nicolae GRAD, Paul DUȚĂ, Flavius-Cristian MĂRCĂU, Magda Simona SCUTARU, Diana CAZANGIU, Marina BULMAGA, Ecaterina COVACI, Daniela Mariana GALERU, Cătălin ȘERBAN, Mihaela PICU, Natalia FURTUNA, Filip Vladimir EDU, Carol CSATLOS, Ion Cristinel RUJAN, Elena-Giorgiana SIMIONESCU, Carmen-Magda NICOLAE, Cătălin TECUCIANU, Cosmina CRISTESCU (TODERICĂ), Cristina PIPOŞ, Mirabela Rely Odette CURELAR, Daniela TECUCIANU, Ana-Maria DUDĂU, Ștefan IOANA, Ioan SUSNEA, Alexandru TATARU, Nicolaie MĂNESCU, Răzvan BRAN, Alina Oana PASCU, and Irina-Ana DROBOT
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international relations ,social sciences ,engineering ,history ,legal sciences ,economics ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
RESEARCH AND SCIENCE TODAY is a biannual science journal established in 2011. The journal is an informational platform that publishes assessment articles and the results of various scientific research carried out by academics. We provide the authors with the opportunity to create and/or perfect their science writing skills. Thus, each issue of the journal (two per year and at least two supplements) will contain professional articles from any academic field, authored by domestic and international academics. The goal of this journal is to pass on relevant information to undergraduate, graduate, and post-graduate students as well as to fellow academics and researchers; the topics covered are unlimited, considering its multi-disciplinary profile. Regarding the national and international visibility of Research and Science Today, it is indexed in over 30 international databases (IDB) and is present in over 200 online libraries and catalogues; therefore, anybody can easily consult the articles featured in each issue by accessing the databases or simply the website.
- Published
- 2014
7. Quantity and Quality of Naturally Acquired Antibody Immunity to the Pneumococcal Proteome Throughout Life.
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Vissers M, van de Garde MDB, He SWJ, Brandsen M, Hendriksen R, Nicolaie MA, van der Maas L, Meiring HD, van Els CACM, van Beek J, and Rots NY
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- Humans, Child, Preschool, Infant, Adult, Female, Male, Middle Aged, Aged, Pneumococcal Infections immunology, Young Adult, Antibody Affinity immunology, Enzyme-Linked Immunosorbent Assay, Bacterial Proteins immunology, Aged, 80 and over, Streptococcus pneumoniae immunology, Antibodies, Bacterial blood, Antibodies, Bacterial immunology, Immunoglobulin G blood, Immunoglobulin G immunology, Proteome immunology, Immunoglobulin A blood, Immunoglobulin A immunology, Saliva immunology
- Abstract
Background: Young children and older adults are susceptible for invasive pneumococcal disease (IPD) caused by Streptococcus pneumoniae. Pneumococcal protein-specific antibodies play a protective role against IPD; however, not much is known about the pace of acquisition, maturation, and maintenance of these antibodies throughout life., Methods: Immunoglobulin G (IgG) and IgA levels, avidity, and/or specificity to the pneumococcal proteome in serum and saliva from healthy young children, adults, and older adults, with known carriage status, were measured by enzyme-linked immunosorbent assay (ELISA) and 2-dimensional western blotting against ΔcpsTIGR4., Results: Eleven-month-old children, the youngest age group tested, had the lowest pneumococcal proteome-specific IgG and IgA levels and avidity in serum and saliva, followed by 24-month-old children and were further elevated in adult groups. Among adult groups, the parents had the highest serum and saliva IgG and IgA antibody levels. In children, antibody levels and avidity correlated with daycare attendance and presence of siblings, posing as proxy for exposure and immunization. Immunodominance patterns slightly varied throughout life., Conclusions: Humoral immunity against the pneumococcal proteome is acquired through multiple episodes of pneumococcal exposure. Low-level and low-avidity antiproteome antibody profiles in young children may contribute to their IPD susceptibility, while in overall antiproteome antibody-proficient older adults other factors likely play a role., Competing Interests: Potential conflicts of interest. All authors: No reported conflicts of interest. All authors have submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest. Conflicts that the editors consider relevant to the content of the manuscript have been disclosed., (© The Author(s) 2024. Published by Oxford University Press on behalf of Infectious Diseases Society of America. All rights reserved. For commercial re-use, please contact reprints@oup.com for reprints and translation rights for reprints. All other permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact journals.permissions@oup.com.)
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- 2024
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8. Serological Profiling of Pneumococcal Proteins Reveals Unique Patterns of Acquisition, Maintenance, and Waning of Antibodies Throughout Life.
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He SWJ, Voß F, Nicolaie MA, Brummelman J, van de Garde MDB, Bijvank E, Poelen M, Wijmenga-Monsuur AJ, Wyllie AL, Trzciński K, Van Beek J, Rots NY, den Hartog G, Hammerschmidt S, and van Els CACM
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- Adult, Aged, Child, Preschool, Female, Humans, Infant, Male, Middle Aged, Bacterial Proteins immunology, Carrier State immunology, Immunity, Humoral, Netherlands epidemiology, Antibodies, Bacterial blood, Antibodies, Bacterial immunology, Immunoglobulin G blood, Immunoglobulin G immunology, Pneumococcal Infections immunology, Pneumococcal Infections blood, Streptococcus pneumoniae immunology
- Abstract
Streptococcus pneumoniae is a leading cause of morbidity and mortality in children and older adults. However, knowledge on the development of pneumococcal protein-specific antibody responses throughout life is limited. To investigate this, we measured serum immunoglobulin G (IgG) levels to 55 pneumococcal proteins in 11-month-old infants (n = 73), 24-month-old children (n = 101), parents (n = 99), adults without children <6 years of age (n = 99), and older adults aged >60 years (n = 100). Our findings revealed low IgG levels in infancy, with distinct development patterns peaking in adults. A decrease in levels was observed for 27 antigens towards older age. Adults and older adults had increased IgG levels during pneumococcal carriage and at increased exposure risk to S. pneumoniae. Carriage was a stronger predictor than exposure or age for antibody responses. These findings highlight the dynamic nature of naturally acquired humoral immunity to pneumococcal proteins throughout life, offering insights for age-targeted interventions., Clinical Trials Registration: Participants were selected from three clinical studies (NTR3462, NTR5405 and NTR3386) conducted in the Netherlands by the National Institute for Public Health and the Environment (RIVM)., Competing Interests: Potential conflicts of interest. All authors: No reported conflicts. All authors have submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest. Conflicts that the editors consider relevant to the content of the manuscript have been disclosed., (© The Author(s) 2024. Published by Oxford University Press on behalf of Infectious Diseases Society of America.)
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- 2024
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9. Protective mucosal SARS-CoV-2 antibodies in the majority of the general population in the Netherlands.
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Verheul MK, Kaczorowska J, Hofstee MI, Schepp RM, Smits GP, Wessels Beljaars D, Kuijer M, Schuin W, Middelhof I, Wong D, van Hagen CCE, Vos ERA, Nicolaie MA, de Melker HE, van Binnendijk RS, van der Klis FRM, and den Hartog G
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- Humans, Netherlands epidemiology, Adult, Middle Aged, Aged, Adolescent, Child, Male, Female, Child, Preschool, Aged, 80 and over, Infant, Young Adult, Angiotensin-Converting Enzyme 2 metabolism, Immunity, Mucosal, Nasal Mucosa immunology, Nasal Mucosa virology, SARS-CoV-2 immunology, COVID-19 immunology, COVID-19 epidemiology, Antibodies, Viral immunology, Antibodies, Viral blood, Spike Glycoprotein, Coronavirus immunology, Immunoglobulin G immunology, Immunoglobulin G blood, Immunoglobulin A immunology
- Abstract
Antibodies to SARS-CoV-2 on the mucosal surfaces of the respiratory tract are understood to contribute to protection against SARS-CoV-2 infection. We aimed to describe the prevalence, levels, and functionality of mucosal antibodies in the general Dutch population. Nasal samples were collected from 778 randomly selected participants, 1-90 years of age, nested within the nationwide prospective SARS-CoV-2 PIENTER corona serosurvey in the Netherlands. Spike-specific immunoglobulin (Ig)G was detected in the nasal samples of 94.6% (in case of the wild-type S1 variant) and 94.9% (Omicron BA.1) of the individuals, whereas 44.2% and 62.7% of the individuals were positive for wild-type and Omicron BA.1 S1 IgA, respectively. The lowest prevalence of mucosal antibodies was observed in children under 12 years of age. The prevalence and levels of IgA and IgG were higher in individuals with a history of SARS-CoV-2 infection. Mucosal antibodies inhibited the binding of Wuhan, Delta, and Omicron BA.1 receptor binding domain to human angiotensin-converting enzyme 2 in 94.4%, 95.4%, and 92.6% of the participants, respectively. Higher levels of mucosal antibodies were associated with a lower risk of future infection., (Copyright © 2024 The Author(s). Published by Elsevier Inc. All rights reserved.)
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- 2024
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10. Primary SARS-CoV-2 infection in children and adults results in similar Fc-mediated antibody effector function patterns.
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Gelderloos AT, Lakerveld AJ, Schepp RM, Nicolaie MA, van Beek J, Beckers L, van Binnendijk RS, Rots NY, and van Kasteren PB
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Objectives: Increasing evidence suggests that Fc-mediated antibody effector functions have an important role in protection against respiratory viruses, including SARS-CoV-2. However, limited data are available on the potential differences in the development, heterogeneity and durability of these responses in children compared to adults., Methods: Here, we assessed the development of spike S1-specific serum antibody-dependent cellular phagocytosis (ADCP), complement deposition (ADCD) and natural killer cell activation (ADNKA), alongside specific antibody binding concentrations (IgG, IgA and IgM) and IgG avidity in healthy adults ( n = 38, 18-56 years) and children ( n = 21, 5-16 years) following primary SARS-CoV-2 infection, with a 10-month longitudinal follow-up. Differences between groups were assessed using a nonparametric Kruskal-Wallis test with Dunn's multiple comparisons test., Results: We found similar (functional) antibody responses in children compared to adults, with a tendency for increased durability in children, which was statistically significant for ADCD ( P < 0.05). While ADNKA was strongly reduced in both adults ( P < 0.001) and children ( P < 0.05) at the latest time point, ADCP remained relatively stable over time, possibly relating to an increase in avidity of the spike-specific antibodies ( P < 0.001). Finally, the ADNKA capacity relative to antibody concentration appeared to decrease over time in both children and adults., Conclusion: In conclusion, our data provide novel insights into the development of SARS-CoV-2-specific antibody Fc-mediated effector functions in children and adults. An increased understanding of these characteristics in specific age populations is valuable for the future design of novel and improved vaccination strategies for respiratory viruses such as SARS-CoV-2., Competing Interests: The authors declare no conflict of interest., (© 2024 The Author(s). Clinical & Translational Immunology published by John Wiley & Sons Australia, Ltd on behalf of Australian and New Zealand Society for Immunology, Inc.)
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- 2024
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11. Effect of age and season on respiratory mucosal immune marker profiles.
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van Woudenbergh E, van Rooijen DM, Veldman-Wolf JJ, Nicolaie MA, Huynen MA, van der Klis FRM, de Jonge MI, and den Hartog G
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- Humans, Adult, Adolescent, Aged, Male, Female, Child, Middle Aged, Child, Preschool, Infant, Aged, 80 and over, Age Factors, Young Adult, Infant, Newborn, Immunity, Mucosal, Seasons, Biomarkers, Respiratory Mucosa immunology
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Background: The upper respiratory tract is continuously exposed to microorganisms and noxious elements, leading to local immune responses and the secretion of immune markers. While several studies describe immune marker profiles in respiratory mucosal samples in defined patient cohorts, mucosal immune profiles from the general population during the different seasons are lacking. Such baseline profiles are essential to understand the effect of various exposures to the mucosal immune system throughout life., Objective: We sought to establish baseline local upper respiratory mucosal immune profiles in the general population and assess these profiles with regard to age, sex, seasonality, and basic health and lifestyle factors., Methods: We measured the concentrations of 35 immune markers involved in a broad range of immunological processes at the mucosa in nasopharyngeal swab samples from 951 individuals, aged 0 to 86 years, from a nationwide study., Results: Clustering analysis showed that immune marker profiles clearly reflected immunological functions, such as tissue regeneration and antiviral responses. Immune marker concentrations changed strongly with seasonality and age, with the most profound changes occurring in the first 25 years of life; they were also associated with sex, body mass index, smoking, mild symptoms of airway infection, and chronic asthma and hay fever., Conclusion: Immunological analyses of noninvasive mucosal samples provide insight into mucosal immune responses to microbial and noxious element exposure in the general population. These data provide a baseline for future studies on respiratory mucosal immune responses and for the development of mucosal immune-based diagnostics., (Copyright © 2023 The Authors. Published by Elsevier Inc. All rights reserved.)
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- 2024
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12. Distinct T cell responsiveness to different COVID-19 vaccines and cross-reactivity to SARS-CoV-2 variants with age and CMV status.
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Brummelman J, Suárez-Hernández S, de Rond L, Bogaard-van Maurik M, Molenaar P, van Wijlen E, Oomen D, Beckers L, Rots NY, van Beek J, Nicolaie MA, van Els CACM, Boer MC, Kaaijk P, Buisman AM, and de Wit J
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- Humans, Middle Aged, Adult, Aged, Male, Female, Age Factors, Young Adult, COVID-19 Vaccines immunology, Cytomegalovirus Infections immunology, Cytomegalovirus Infections prevention & control, Immunization, Secondary, Cytomegalovirus immunology, BNT162 Vaccine immunology, Vaccination, 2019-nCoV Vaccine mRNA-1273 immunology, ChAdOx1 nCoV-19 immunology, Antibodies, Neutralizing immunology, Antibodies, Neutralizing blood, Antibodies, Viral immunology, Antibodies, Viral blood, Aged, 80 and over, Cross Reactions immunology, SARS-CoV-2 immunology, COVID-19 immunology, COVID-19 prevention & control, COVID-19 virology, T-Lymphocytes immunology, Spike Glycoprotein, Coronavirus immunology
- Abstract
Introduction: Accumulating evidence indicates the importance of T cell immunity in vaccination-induced protection against severe COVID-19 disease, especially against SARS-CoV-2 Variants-of-Concern (VOCs) that more readily escape from recognition by neutralizing antibodies. However, there is limited knowledge on the T cell responses across different age groups and the impact of CMV status after primary and booster vaccination with different vaccine combinations. Moreover, it remains unclear whether age has an effect on the ability of T cells to cross-react against VOCs., Methods: Therefore, we interrogated the Spike-specific T cell responses in healthy adults of the Dutch population across different ages, whom received different vaccine types for the primary series and/or booster vaccination, using IFNɣ ELISpot. Cells were stimulated with overlapping peptide pools of the ancestral Spike protein and different VOCs., Results: Robust Spike-specific T cell responses were detected in the vast majority of participants upon the primary vaccination series, regardless of the vaccine type (i.e. BNT162b2, mRNA-1273, ChAdOx1 nCoV-19, or Ad26.COV2.S). Clearly, in the 70+ age group, responses were overall lower and showed more variation compared to younger age groups. Only in CMV-seropositive older adults (>70y) there was a significant inverse relation of age with T cell responses. Although T cell responses increased in all age groups after booster vaccination, Spike-specific T cell frequencies remained lower in the 70+ age group. Regardless of age or CMV status, primary mRNA-1273 vaccination followed by BNT162b2 booster vaccination showed limited booster effect compared to the BNT162b2/BNT162b2 or BNT162b2/mRNA-1273 primary-booster regimen. A modest reduction in cross-reactivity to the Alpha, Delta and Omicron BA.1, but not the Beta or Gamma variant, was observed after primary vaccination., Discussion: Together, this study shows that age, CMV status, but also the primary-booster vaccination regimen influence the height of the vaccination-induced Spike-specific T cell response, but did not impact the VOC cross-reactivity., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2024 Brummelman, Suárez-Hernández, de Rond, Bogaard-van Maurik, Molenaar, van Wijlen, Oomen, Beckers, Rots, van Beek, Nicolaie, van Els, Boer, Kaaijk, Buisman and de Wit.)
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- 2024
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13. Prevalence of human respiratory pathogens and associated mucosal cytokine levels in young children and adults: a cross-sectional observational study in the Netherlands during the winter of 2012/2013.
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van Kasteren PB, Gelderloos AT, Nicolaie MA, den Hartog G, Vissers M, Luytjes W, Rots NY, and van Beek J
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- Humans, Cross-Sectional Studies, Netherlands epidemiology, Infant, Male, Female, Prevalence, Middle Aged, Adult, Aged, Child, Preschool, Aged, 80 and over, Virus Diseases epidemiology, Virus Diseases virology, Virus Diseases immunology, Viruses isolation & purification, Viruses classification, Viruses immunology, Respiratory Tract Infections epidemiology, Respiratory Tract Infections virology, Respiratory Tract Infections immunology, Cytokines metabolism, Seasons
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Respiratory pathogens can cause severe disease and even death, especially in the very young and very old. Studies investigating their prevalence often focus on individuals presenting to healthcare providers with symptoms. However, the design of prevention strategies, e.g. which target groups to vaccinate, will benefit from knowledge on the prevalence of, risk factors for and host response to these pathogens in the general population. In this study, upper respiratory samples (n = 1311) were collected cross-sectionally during winter from 11- and 24-month old children, their parents, and adults ≥60 years of age that were recruited irrespective of seeking medical care. Almost all children, approximately two-thirds of parents and a quarter of older adults tested positive for at least one pathogen, often in the absence of symptoms. Viral interference was evident for the combination of rhinovirus and respiratory syncytial virus. Attending childcare facilities and having siblings associated with increased pathogen counts in children. On average, children showed increased levels of mucosal cytokines compared to parents and especially proinflammatory molecules associated with the presence of symptoms. These findings may guide further research into transmission patterns of respiratory pathogens and assist in determining the most appropriate strategies for the prediction and prevention of disease., (© The Author(s) 2024. Published by Oxford University Press on behalf of FEMS.)
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- 2024
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14. Constructing synthetic populations in the age of big data.
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Nicolaie MA, Füssenich K, Ameling C, and Boshuizen HC
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- Humans, Big Data, Life Style
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Background: To develop public health intervention models using micro-simulations, extensive personal information about inhabitants is needed, such as socio-demographic, economic and health figures. Confidentiality is an essential characteristic of such data, while the data should reflect realistic scenarios. Collection of such data is possible only in secured environments and not directly available for open-source micro-simulation models. The aim of this paper is to illustrate a method of construction of synthetic data by predicting individual features through models based on confidential data on health and socio-economic determinants of the entire Dutch population., Methods: Administrative records and health registry data were linked to socio-economic characteristics and self-reported lifestyle factors. For the entire Dutch population (n = 16,778,708), all socio-demographic information except lifestyle factors was available. Lifestyle factors were available from the 2012 Dutch Health Monitor (n = 370,835). Regression model was used to sequentially predict individual features., Results: The synthetic population resembles the original confidential population. Features predicted in the first stages of the sequential procedure are virtually similar to those in the original population, while those predicted in later stages of the sequential procedure carry the accumulation of limitations furthered by data quality and previously modelled features., Conclusions: By combining socio-demographic, economic, health and lifestyle related data at individual level on a large scale, our method provides us with a powerful tool to construct a synthetic population of good quality and with no confidentiality issues., (© 2023. The Author(s).)
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- 2023
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15. Characterization of the early cellular immune response induced by HPV vaccines.
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Pasmans H, Berkowska MA, Diks AM, de Mooij B, Groenland RJ, de Rond L, Nicolaie MA, van der Burg SH, van Dongen JJM, van der Klis FRM, and Buisman AM
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- Antibodies, Viral, Female, Human papillomavirus 16, Humans, Immunity, Cellular, Pilot Projects, Papillomavirus Infections prevention & control, Papillomavirus Vaccines
- Abstract
Introduction: Current human papillomavirus (HPV) vaccines consist of virus-like particles (VLPs) which are based on the L1 protein, but they are produced by different expression systems and use different adjuvants. We performed in-depth immunophenotyping of multiple innate and adaptive immune cells after vaccination with bivalent versus nonavalent HPV vaccines., Method: Twenty pre-menopausal HPV-seronegative women were enrolled and randomized to receive three-doses of either the bivalent or the nonavalent HPV vaccine. Blood samples were collected at multiple time points from baseline up to 7 months after first vaccination. Four extensive EuroFlow flow cytometry antibody panels were used to monitor various immune cell subsets. Additionally, HPV-specific memory B- and T cells were determined by ELISPOT and HPV-specific antibody levels were measured by a VLP-based multiplex immunoassay., Results: In both cohorts, the numbers of plasma cells expanded in the first week after both primary and tertiary vaccination. HPV16 and HPV18-specific antibody levels and memory B and T-cell responses were higher in the bivalent than in the nonavalent vaccinees one month post third vaccination. For HPV31 and HPV45-specific antibody levels this pattern was reversed. Monocytes showed an expansion one day after vaccination in both cohorts but were significantly higher in the bivalent vaccine cohort. Large heterogeneity in responses of the other cell subsets was observed between donors., Conclusion: This pilot study showed a consistent response of monocytes and plasma cells after vaccination and a considerable variation in other circulating immune cells in both types of HPV vaccines between donors., Competing Interests: MB, AD, and JD report inventorship of the patent “Means and methods for multiparameter cytometry-based leukocyte subsetting” (NL2844751, PCT/NL2020/050688, priority date 5 November 2019), owned by the EuroFlow Consortium. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest. We thank GlaxoSmithKline Biologicals SA for providing at cost part of the VLP’s that we used in our assays. GlaxoSmithKline Biologicals SA was provided the opportunity to review a preliminary version of this manuscript in order to ensure the protection of its proprietary information and intellectual property, but the authors are solely responsible for final content and interpretation., (Copyright © 2022 Pasmans, Berkowska, Diks, de Mooij, Groenland, de Rond, Nicolaie, van der Burg, van Dongen, van der Klis and Buisman.)
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- 2022
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16. Antibody Levels at 3-Years Follow-Up of a Third Dose of Measles-Mumps-Rubella Vaccine in Young Adults.
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Kaaijk P, Wijmenga-Monsuur AJ, Ten Hulscher HI, Kerkhof J, Smits G, Nicolaie MA, van Houten MA, and van Binnendijk RS
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Mumps outbreaks and breakthrough infections of measles and rubella have raised concerns about waning of vaccine-induced immunity after two doses of measles-mumps-rubella (MMR) vaccination. In the present follow-up study, serum IgG antibodies against mumps, measles and rubella, as well as the functional neutralizing antibodies against both the mumps vaccine strain and mumps outbreak strains were measured longitudinally in young adults that received a third MMR (MMR3) dose. The mumps-specific IgG and virus neutralizing antibody levels at 3 years after vaccination were still elevated compared to pre-vaccination antibody levels, although the differences were smaller than at earlier timepoints. Interestingly, subjects with low antibody levels to mumps before vaccination benefited the most as they showed the strongest antibody increase after an MMR3 dose. Three years after an MMR3 dose, all subjects had antibody levels to measles and rubella above the internationally agreed antibody cutoff levels for clinical protection. Our data support the recommendation that an MMR3 dose may provide additional protection for those that have become susceptible to mumps virus infection during outbreaks. MMR3 also resulted in an increase in anti-measles and rubella antibody levels that lasted longer than might have been expected.
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- 2022
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17. Influenza-like Illness Exacerbates Pneumococcal Carriage in Older Adults.
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Miellet WR, van Veldhuizen J, Nicolaie MA, Mariman R, Bootsma HJ, Bosch T, Rots NY, Sanders EAM, van Beek J, and Trzciński K
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- Aged, Carrier State epidemiology, Child, Child, Preschool, Humans, Infant, Infant, Newborn, Nasopharynx, Pneumococcal Vaccines, Saliva, Streptococcus pneumoniae genetics, Influenza, Human epidemiology, Pneumococcal Infections epidemiology
- Abstract
Background: In older adults, pneumococcal disease is strongly associated with respiratory viral infections, but the impact of viruses on Streptococcus pneumoniae carriage prevalence and load remains poorly understood. Here, we investigated the effects of influenza-like illness (ILI) on pneumococcal carriage in community-dwelling older adults., Methods: We investigated the presence of pneumococcal DNA in saliva samples collected in the 2014/2015 influenza season from 232 individuals aged ≥60 years at ILI onset, followed by sampling 2-3 weeks and 7-9 weeks after the first sample. We also sampled 194 age-matched controls twice 2-3 weeks apart. Pneumococcal DNA was detected with quantitative polymerase chain reaction assays targeting the piaB and lytA genes in raw and in culture-enriched saliva. Bacterial and pneumococcal abundances were determined in raw saliva with 16S and piaB quantification., Results: The prevalence of pneumococcus-positive samples was highest at onset of ILI (42/232 [18%]) and lowest among controls (26/194 [13%] and 22/194 [11%] at the first and second samplings, respectively), though these differences were not significant. Pneumococcal carriage was associated with exposure to young children (odds ratio [OR], 2.71 [95% confidence interval {CI}, 1.51-5.02]; P < .001), and among asymptomatic controls with presence of rhinovirus infection (OR, 4.23 [95% CI, 1.16-14.22]; P < .05). When compared with carriers among controls, pneumococcal absolute abundances were significantly higher at onset of ILI (P < .01), and remained elevated beyond recovery from ILI (P < .05). Finally, pneumococcal abundances were highest in carriage events newly detected after ILI onset (estimated geometric mean, 1.21 × 10-5 [95% CI, 2.48 × 10-7 to 2.41 × 10-5], compared with preexisting carriage)., Conclusions: ILI exacerbates pneumococcal colonization of the airways in older adults, and this effect persists beyond recovery from ILI., (© The Author(s) 2020. Published by Oxford University Press for the Infectious Diseases Society of America.)
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- 2021
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18. Mortality review as a tool to assess the contribution of healthcare-associated infections to death: results of a multicentre validity and reproducibility study, 11 European Union countries, 2017 to 2018.
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van der Kooi T, Lepape A, Astagneau P, Suetens C, Nicolaie MA, de Greeff S, Lozoraitiene I, Czepiel J, Patyi M, and Plachouras D
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- Delivery of Health Care, European Union, Humans, Reproducibility of Results, Clostridium Infections, Cross Infection diagnosis, Cross Infection epidemiology
- Abstract
IntroductionThe contribution of healthcare-associated infections (HAI) to mortality can be estimated using statistical methods, but mortality review (MR) is better suited for routine use in clinical settings. The European Centre for Disease Prevention and Control recently introduced MR into its HAI surveillance.AimWe evaluate validity and reproducibility of three MR measures.MethodsThe on-site investigator, usually an infection prevention and control doctor, and the clinician in charge of the patient independently reviewed records of deceased patients with bloodstream infection (BSI), pneumonia, Clostridioides difficile infection (CDI) or surgical site infection (SSI), and assessed the contribution to death using 3CAT: definitely/possibly/no contribution to death; WHOCAT: sole cause/part of causal sequence but not sufficient on its own/contributory cause but unrelated to condition causing death/no contribution, based on the World Health Organization's death certificate; QUANT: Likert scale: 0 (no contribution) to 10 (definitely cause of death). Inter-rater reliability was assessed with weighted kappa (wk) and intra-cluster correlation coefficient (ICC). Reviewers rated the fit of the measures.ResultsFrom 2017 to 2018, 24 hospitals (11 countries) recorded 291 cases: 87 BSI, 113 pneumonia , 71 CDI and 20 SSI. The inter-rater reliability was: 3CAT wk 0.68 (95% confidence interval (CI): 0.61-0.75); WHOCAT wk 0.65 (95% CI: 0.58-0.73); QUANT ICC 0.76 (95% CI: 0.71-0.81). Inter-rater reliability ranged from 0.72 for pneumonia to 0.52 for CDI. All three measures fitted 'reasonably' or 'well' in > 88%.ConclusionFeasibility, validity and reproducibility of these MR measures was acceptable for use in HAI surveillance.
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- 2021
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19. Associations of faecal microbiota with influenza-like illness in participants aged 60 years or older: an observational study.
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Fuentes S, den Hartog G, Nanlohy NM, Wijnands L, Ferreira JA, Nicolaie MA, Pennings JLA, Jacobi R, de Wit J, van Beek J, and van Baarle D
- Abstract
Background: People aged 60 years or older are at high risk for respiratory infections, one of the leading causes of mortality worldwide. Vaccination is the main way to protect against these infections; however, vaccination is less effective in older adults than in younger adults due to ageing of the immune system, so innovative strategies that improve vaccine responses could provide a major public health benefit. The gut microbiota regulates host immune homoeostasis and response against pathogens, but human studies showing the effects of the gut microbiota on respiratory infections in older adults are sparse. We aimed to investigate the composition of the microbiota in relation to respiratory infections and local and systemic immune markers in older adults during an influenza season., Methods: In this observational study, participants were selected from an influenza-like illness (ILI) prospective surveillance cohort in which community-dwelling adults aged 60 years and older in the Netherlands were recruited through their general practitioner or the Civil Registry. Inclusion criteria have been described elsewhere. Participants completed questionnaires and self-reported symptoms. To measure microbiota composition, faecal samples were collected from participants registering an ILI event, with a follow-up (recovery) sample collected 7-9 weeks after the ILI event, and from asymptomatic participants not reporting any event throughout the season. We tested associations between microbiota profiles and a set of health-related variables, patient characteristics, and local and systemic immune markers. We cultured identified bacterial biomarkers for ILI with CaCo-2 cells in an in vitro intestinal epithelial model and measured the induced immune response. This study is registered with http://www.trialregister.nl, NL4666., Findings: Between Oct 1, 2014, and April 30, 2015, 2425 older adults were recruited into the ILI surveillance cohort. From Oct 1, 2014, to June 15, 2015, faecal samples were collected from 397 participants, of whom 213 (54%) reported an ILI event once throughout the season and 184 (46%) did not. 192 ILI participants recovered and provided follow-up samples. Microbiota composition was altered during an ILI event. The Bacteroidetes (mean relative abundance 17·51% [SD 11·41] in the ILI group and 14·19% [10·02] in the control group; adjusted p=0·014) and the Proteobacteria (3·40% [8·10] in the ILI group and 1·57% [3·69] in the control group; adjusted p=0·015) were more abundant in the ILI group than in the control group. The abundance of Ruminococcus torques was positively associated with ILI and the abundance of Escherichia/Shigella, negatively correlated with alpha diversity, and negatively co-occurred with beneficial taxa, including butyrate producers. R torques was associated with pro-inflammatory profiles, both locally in faeces and systemically in blood. ILI-associated taxa (R torques and Escherichia coli) had symbiotic effects on the cellular immune response when cultured together in an in vitro model., Interpretation: The abundances of specific bacteria could be used as potential biomarkers for susceptibility to respiratory infections and as targets for intervention in the ageing population., Funding: The Dutch Ministry of Health, Welfare and Sport, and the Strategic Program of the National Institute for Public Health and the Environment., (Copyright © 2021 The Author(s). Published by Elsevier Ltd. This is an Open Access article under the CC BY 4.0 license. Published by Elsevier Ltd.. All rights reserved.)
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- 2021
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20. Dynamics of the Antibody Response After a Third Dose of Measles-Mumps-Rubella Vaccine Indicate a Slower Decline Compared With a Second Dose.
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Kaaijk P, Nicolaie MA, van Rooijen D, van Houten MA, van der Klis FR, Buisman AM, and van Binnendijk RS
- Abstract
Background: Breakthrough infections of measles and mumps have raised concerns about the duration of vaccine-induced immunity, which might be improved by a third dose of measles-mumps-rubella vaccine (MMR3)., Methods: Here we compared (IgG) antibody levels against measles, mumps, and rubella in blood samples of 9-year-old children and young adults (18-25 years) following MMR2 and MMR3, respectively., Results: We found that, in addition to antibody boosting for all 3 vaccine components, MMR3 resulted in lower antibody decay rates than MMR2; the declines were most prominent for mumps and rubella., Conclusions: This study suggests that MMR3 provides long-lasting seroprotection against measles, mumps, and rubella., (© The Author(s) 2020. Published by Oxford University Press on behalf of Infectious Diseases Society of America.)
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- 2020
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21. Vertical modeling: analysis of competing risks data with a cure fraction.
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Nicolaie MA, Taylor JMG, and Legrand C
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- Algorithms, Data Accuracy, Data Analysis, Humans, Kaplan-Meier Estimate, Likelihood Functions, Risk Assessment, Computer Simulation, Models, Statistical, Survival Analysis
- Abstract
In this paper, we extend the vertical modeling approach for the analysis of survival data with competing risks to incorporate a cure fraction in the population, that is, a proportion of the population for which none of the competing events can occur. The proposed method has three components: the proportion of cure, the risk of failure, irrespective of the cause, and the relative risk of a certain cause of failure, given a failure occurred. Covariates may affect each of these components. An appealing aspect of the method is that it is a natural extension to competing risks of the semi-parametric mixture cure model in ordinary survival analysis; thus, causes of failure are assigned only if a failure occurs. This contrasts with the existing mixture cure model for competing risks of Larson and Dinse, which conditions at the onset on the future status presumably attained. Regression parameter estimates are obtained using an EM-algorithm. The performance of the estimators is evaluated in a simulation study. The method is illustrated using a melanoma cancer data set.
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- 2019
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22. Vertical modelling: Analysis of competing risks data with missing causes of failure.
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Nicolaie MA, van Houwelingen HC, and Putter H
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- Algorithms, Humans, Kaplan-Meier Estimate, Likelihood Functions, Proportional Hazards Models, Survival Analysis, Models, Statistical, Risk Assessment methods, Treatment Failure
- Abstract
We propose vertical modelling as a natural approach to the problem of analysis of competing risks data when failure types are missing for some individuals. Under a natural missing-at-random assumption for these missing failure types, we use the observed data likelihood to estimate its parameters and show that the all-cause hazard and the relative hazards appearing in vertical modelling are indeed key quantities of this likelihood. This fact has practical implications in that it suggests vertical modelling as a simple and attractive method of analysis in competing risks with missing causes of failure; all individuals are used in estimating the all-cause hazard and only those with non-missing cause of failure for relative hazards. The relative hazards also appear in a multiple imputation approach to the same problem proposed by Lu and Tsiatis and in the EM algorithm. We compare the vertical modelling approach with the method of Goetghebeur and Ryan for a breast cancer data set, highlighting the different aspects they contribute to the data analysis., (© The Author(s) 2011.)
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- 2015
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23. No increase in Kidney Injury Molecule-1 and Neutrophil Gelatinase-Associated Lipocalin excretion following intravenous contrast enhanced-CT.
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Kooiman J, van de Peppel WR, Sijpkens YW, Brulez HF, de Vries PM, Nicolaie MA, Putter H, Huisman MV, van der Kooij W, van Kooten C, and Rabelink TJ
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- Acute Kidney Injury blood, Acute Kidney Injury chemically induced, Aged, Biomarkers blood, Biomarkers urine, Creatinine urine, Female, Hepatitis A Virus Cellular Receptor 1, Humans, Lipocalin-2, Lipocalins blood, Male, Membrane Glycoproteins blood, Proto-Oncogene Proteins blood, Receptors, Virus blood, Renal Insufficiency, Chronic blood, Renal Insufficiency, Chronic complications, Renal Insufficiency, Chronic urine, Tomography, X-Ray Computed methods, Acute Kidney Injury urine, Acute-Phase Proteins urine, Contrast Media adverse effects, Iodine Compounds adverse effects, Lipocalins urine, Membrane Glycoproteins urine, Proto-Oncogene Proteins urine
- Abstract
Objectives: To analyze kidney injury molecule-1 (KIM-1) and neutrophil gelatinase-associated lipocalin (N-GAL) excretion post-intravenous contrast enhanced-CT (CE-CT) in patients with chronic kidney disease (CKD)., Methods: Patients were enrolled in a trial on hydration regimes to prevent contrast-induced acute kidney injury (CI-AKI). Blood and urine samples were taken at baseline, 4 - 6, and 48 - 96 h post CE-CT. Urinary KIM-1 and N-GAL values were normalized for urinary creatinine levels, presented as medians with 2.5 - 97.5 percentiles., Results: Of the enrolled 511 patients, 10 (2%) were lost to follow-up. CI-AKI occurred in 3.9% of patients (20/501). Median KIM-1 values were 1.2 (0.1 - 7.7) at baseline, 1.3 (0.1 - 8.6) at 4 - 6 h, and 1.3 ng/mg (0.1 - 8.1) at 48 - 96 h post CE-CT (P = 0.39). Median N-GAL values were 41.0 (4.4 - 3,174.4), 48.9 (5.7 - 3,406.1), and 37.8 μg/mg (3.5 - 3,200.4), respectively (P = 0.07). The amount of KIM-1 and N-GAL excretion in follow-up was similar for patients with and without CI-AKI (P-value KIM-1 0.08, P-value N-GAL 0.73). Neither patient characteristics at baseline including severe CKD, medication use, nor contrast dose were associated with increased excretion of KIM-1 or N-GAL during follow-up., Conclusion: KIM-1 and N-GAL excretion were unaffected by CE-CT both in patients with and without CI-AKI, suggesting that CI-AKI was not accompanied by tubular injury., Key Points: • KIM-1 and N-GAL excretion were unaffected by intravenous contrast-enhanced CT (CE-CT). • Patient or procedure characteristics were not associated with increased KIM-1 or N-GAL excretion. • Performance of CE-CT in CKD patients is likely to be safe.
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- 2015
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24. Dynamic pseudo-observations: a robust approach to dynamic prediction in competing risks.
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Nicolaie MA, van Houwelingen JC, de Witte TM, and Putter H
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- Computer Simulation, Humans, Incidence, Prognosis, Bone Marrow Transplantation mortality, Data Interpretation, Statistical, Leukemia, Myelogenous, Chronic, BCR-ABL Positive mortality, Leukemia, Myelogenous, Chronic, BCR-ABL Positive surgery, Models, Statistical, Risk Assessment methods, Survival Analysis
- Abstract
In this article, we propose a new approach to the problem of dynamic prediction of survival data in the presence of competing risks as an extension of the landmark model for ordinary survival data. The key feature of our method is the introduction of dynamic pseudo-observations constructed from the prediction probabilities at different landmark prediction times. They specifically address the issue of estimating covariate effects directly on the cumulative incidence scale in competing risks. A flexible generalized linear model based on these dynamic pseudo-observations and a generalized estimation equations approach to estimate the baseline and covariate effects will result in the desired dynamic predictions and robust standard errors. Our approach has a number of attractive features. It focuses directly on the prediction probabilities of interest, avoiding in this way complex modeling of cause-specific hazards or subdistribution hazards. As a result, it is robust against departures from these omnibus models. From a computational point of view an advantage of our approach is that it can be fitted with existing statistical software and that a variety of link functions and regression models can be considered, once the dynamic pseudo-observations have been estimated. We illustrate our approach on a real data set of chronic myeloid leukemia patients after bone marrow transplantation., (© 2013, The International Biometric Society.)
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- 2013
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25. Dynamic prediction by landmarking in competing risks.
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Nicolaie MA, van Houwelingen JC, de Witte TM, and Putter H
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- Bone Marrow Transplantation standards, Graft vs Host Disease etiology, Humans, Leukemia, Myelogenous, Chronic, BCR-ABL Positive therapy, Neoplasm Recurrence, Local, Forecasting methods, Proportional Hazards Models, Risk
- Abstract
We propose an extension of the landmark model for ordinary survival data as a new approach to the problem of dynamic prediction in competing risks with time-dependent covariates. We fix a set of landmark time points tLM within the follow-up interval. For each of these landmark time points tLM , we create a landmark data set by selecting individuals at risk at tLM ; we fix the value of the time-dependent covariate in each landmark data set at tLM . We assume Cox proportional hazard models for the cause-specific hazards and consider smoothing the (possibly) time-dependent effect of the covariate for the different landmark data sets. Fitting this model is possible within the standard statistical software. We illustrate the features of the landmark modelling on a real data set on bone marrow transplantation., (Copyright © 2012 John Wiley & Sons, Ltd.)
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- 2013
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26. Vertical modeling: a pattern mixture approach for competing risks modeling.
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Nicolaie MA, van Houwelingen HC, and Putter H
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- Adult, Cohort Studies, Computer Simulation, Female, Hematopoietic Stem Cell Transplantation mortality, Humans, Leukemia mortality, Male, Young Adult, Hematopoietic Stem Cell Transplantation standards, Leukemia surgery, Models, Statistical, Risk Assessment methods
- Abstract
We study an alternative approach for estimation in the competing risks framework, called vertical modeling. It is motivated by a decomposition of the joint distribution of time and cause of failure. The two elements of this decomposition are (1) the time of failure and (2) the cause of failure condition on time of failure. Both elements of the model are based on observable quantities, namely the total hazard and the relative cause-specific hazards. The model can be implemented using the standard software. The relative cause-specific hazards are flexibly estimated using multinomial logistic regression and smoothing splines. We show estimates of cumulative incidences from vertical modeling to be more efficient statistically than those obtained from the standard nonparametric model. We illustrate our methods using data of 8966 leukemia patients from the European Group for Blood and Marrow Transplantation., (Copyright 2010 John Wiley & Sons, Ltd.)
- Published
- 2010
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