1. Semi-overcomplete convolutional auto-encoder embedding as shape priors for deep vessel segmentation
- Author
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Sadikine, Amine, Badic, Bogdan, Tasu, Jean-Pierre, Noblet, Vincent, Visvikis, Dimitris, and Conze, Pierre-Henri
- Subjects
Electrical Engineering and Systems Science - Image and Video Processing ,Computer Science - Computer Vision and Pattern Recognition ,Computer Science - Machine Learning - Abstract
The extraction of blood vessels has recently experienced a widespread interest in medical image analysis. Automatic vessel segmentation is highly desirable to guide clinicians in computer-assisted diagnosis, therapy or surgical planning. Despite a good ability to extract large anatomical structures, the capacity of U-Net inspired architectures to automatically delineate vascular systems remains a major issue, especially given the scarcity of existing datasets. In this paper, we present a novel approach that integrates into deep segmentation shape priors from a Semi-Overcomplete Convolutional Auto-Encoder (S-OCAE) embedding. Compared to standard Convolutional Auto-Encoders (CAE), it exploits an over-complete branch that projects data onto higher dimensions to better characterize tiny structures. Experiments on retinal and liver vessel extraction, respectively performed on publicly-available DRIVE and 3D-IRCADb datasets, highlight the effectiveness of our method compared to U-Net trained without and with shape priors from a traditional CAE., Comment: 5 pages, 4 figures, conference
- Published
- 2024
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