78 results on '"Nunomura K"'
Search Results
2. Study of Surface Roughness Effect on Super–Normal Transition of Ti/Au Transition Edge Sensor Calorimeters
- Author
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Kengo, K., Ezoe, Y., Kitazawa, S., Hayakawa, R., Nunomura, K., Ohashi, T., Ishisaki, Y., Yamada, S., Hidaka, M., Satoh, T., and Mitsuda, K.
- Published
- 2018
- Full Text
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3. Rb plays a role in survival of Abl-dependent human tumor cells as a downstream effector of Abl tyrosine kinase
- Author
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Nagano, K, Itagaki, C, Izumi, T, Nunomura, K, Soda, Y, Tani, K, Takahashi, N, Takenawa, T, and Isobe, T
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- 2006
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4. Study of Surface Roughness Effect on Super-Normal Transition of Ti/Au Transition Edge Sensor Calorimeters
- Author
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Nunomura, K., Satoh, T., Kosaka, Kengo, Ezoe, Yuichiro, Kitazawa, Seichi, Hayakawa, Ryota, Ohashi, Takaya, Ishisaki, Yoshitaka, Yamada, Shinya, Hidaka, Mutsuo, and Mitsuda, Kazuhisa
- Subjects
Fabrication ,Materials science ,business.industry ,02 engineering and technology ,Surface finish ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,01 natural sciences ,Atomic and Molecular Physics, and Optics ,Microstrip ,Crosstalk ,Surface roughness ,Chemical mechanical polishing ,Chemical-mechanical planarization ,0103 physical sciences ,Optoelectronics ,General Materials Science ,Transition edge sensor ,010306 general physics ,0210 nano-technology ,business ,TES - Abstract
著者人数: 11名, Accepted: 2018-06-15, 資料番号: SA1180190000
- Published
- 2018
5. Methanol-induced health disturbance in a worker engaged in antimold spraying
- Author
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Kudo, Y., Kubo, T., Nakamura, I., Nunomura, K., Takada, M., and Hukuyama, J.
- Published
- 1996
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6. Kaonic Atom Experiments at J-PARC
- Author
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Hashimoto, T., primary, Aikawa, S., additional, Ajimura, S., additional, Akaishi, T., additional, Asano, H., additional, Bazzi, M., additional, Beer, G., additional, Bennett, D., additional, Berucci, C., additional, Bosnar, D., additional, Bragadireanu, M., additional, Bhler, P., additional, Busso, L., additional, Butt, A. D., additional, Cargnelli, M., additional, Choi, Seonho, additional, Curceanu, C., additional, Doriese, W. B., additional, Durkin, M. S., additional, Enomoto, S., additional, Ezoe, Y., additional, Fowler, J. W., additional, Fujioka, H., additional, Fukuda, T., additional, Guaraldo, C., additional, Gustafsson, F. P., additional, Han, C., additional, Hayakawa, R., additional, Hayano, R. S., additional, Hayashi, T., additional, Hays-Wehle, J. P., additional, Hilton, G. C., additional, Hiraiwa, T., additional, Ichinohe, Y., additional, Iio, M., additional, Iizawa, Y., additional, Iliescu, M., additional, Inoue, K., additional, Ishimoto, S., additional, Ishisaki, Y., additional, Itahashi, K., additional, Iwasaki, M., additional, Kawasaki, S., additional, Ma, Y., additional, Marton, J., additional, Matsuda, Y., additional, Mizoi, Y., additional, Morra, O., additional, Murakami, T., additional, Nagae, T., additional, Nishi, T., additional, Noda, H., additional, Noumi, H., additional, Nunomura, K., additional, O’Neil, G. C., additional, Ohashi, T., additional, Ohnishi, H., additional, Okada, S., additional, Outa, H., additional, Piscicchia, K., additional, Reintsema, C. D., additional, Sada, Y., additional, Sakaguchi, A., additional, Sakuma, F., additional, Sato, M., additional, Schmidt, D. R., additional, Scordo, A., additional, Sekimoto, M., additional, Shi, H., additional, Shirotori, K., additional, Sirghi, D., additional, Sirghi, F., additional, Suzuki, K., additional, Suzuki, S., additional, Suzuki, T., additional, Swetz, D. S., additional, Takamine, A., additional, Tanida, K., additional, Tatsuno, H., additional, Tomono, D., additional, Toyoda, A., additional, Trippl, C., additional, Tsukada, K., additional, Uhlig, J., additional, Ullom, J. N., additional, Vazquez Doce, O., additional, Widmann, E., additional, Yamada, S., additional, Yamaga, T., additional, Yamazaki, T., additional, and Zmeskal, J., additional
- Published
- 2019
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7. Thermally Stimulated Currents in Thin Film Electroluminescent Devices
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Sano, Y., Nunomura, K., Lotsch, H. K. V., editor, Shionoya, Shigeo, editor, and Kobayashi, Hiroshi, editor
- Published
- 1989
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8. Super DIOS: Future X-ray Spectroscopic Mission to Search for Dark Baryons.
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Ohashi, T., Ishisaki, Y., Ezoe, Y., Yamada, S., Hayakawa, R., Nunomura, K., Sato, K., Tawara, Y., Mitsuishi, I., Ohtsuka, K., Mitsuda, K., Yamasaki, N. Y., Kikuchi, T., Hayashi, T., Muramatsu, H., Nakashima, Y., Ota, N., Osato, K., Ichinohe, Y., and Eckart, M. E.
- Published
- 2018
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9. 3.2 Calorimetric Studies of Yeast Metabolism under Nongrowing Conditions
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Fujita, T., primary and Nunomura, K., additional
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- 1977
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10. Calorimetric study on the state of water in microbial cells
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Shinohara, A., primary, Nunomura, K., additional, and Fujita, T., additional
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- 2007
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11. Rb plays a role in survival of Abl-dependent human tumor cells as a downstream effector of Abl tyrosine kinase
- Author
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Nagano, K, primary, Itagaki, C, additional, Izumi, T, additional, Nunomura, K, additional, Soda, Y, additional, Tani, K, additional, Takahashi, N, additional, Takenawa, T, additional, and Isobe, T, additional
- Published
- 2005
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12. Development of a New Inhibitor of Glucosylceramide Synthase
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Jimbo, M., primary, Yamagishi, K., additional, Yamaki, T., additional, Nunomura, K., additional, Kabayama, K., additional, Igarashi, Y., additional, and Inokuchi, J.-i., additional
- Published
- 2000
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13. A high luminance direct view color AC-plasma display.
- Author
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Okajima, T., Sano, Y., Koyama, N., Ota, T., and Nunomura, K.
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- 1991
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14. Ta-SiC Thin Film Resistors for Highly Reliable Thermal Printing Heads.
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Nunomura, K., Koyama, N., and Matsubara, T.
- Published
- 1983
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15. Resistance of Pseudomonas aeruginosa to cefsulodin: modification of penicillin-binding protein 3 and mapping of its chromosomal gene.
- Author
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Gotoh, Naomasa, Nunomura, Kiyotada, Nishino, Takeshi, Gotoh, N, Nunomura, K, and Nishino, T
- Abstract
Spontaneous cefsulodin-resistant mutants of Pseudomonas aeruginosa PAO4089 were isolated on agar impregnated with 3 mg/l of cefsulodin. This strain does not produce any chromosomal beta-lactamase. The MICs of cefsulodin for the parent and its mutants were 0.78 and 12.5 mg/l, respectively. Complete cross-resistance between cefsulodin and seven other antipseudomonal beta-lactams was noted in the mutants. The mutant gene, designated as pbpB, was mapped by FP5 plasmid-mediated conjugation and found to be near to cys-59 on the PAO chromosome, the gene order being pur-67, oruI, pbpB and cys-59. There were no detectable differences between the parent and its mutants in their outer membrane protein profiles. Penicillin-binding protein assay, by the competition method, with cefsulodin or carbenicillin showed a significant reduction in affinity of PBP3 for these beta-lactams. This PBP is the primary target for cefsulodin in P. aeruginosa. The genetic mechanism by which the cefsulodin-resistant clinical isolates of P. aeruginosa have emerged is discussed. [ABSTRACT FROM AUTHOR]
- Published
- 1990
16. A novel TFEL device using a high-dielectric-constant multilayer ceramic substrate.
- Author
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Sano, Y., Nunomura, K., Koyama, N., Sakuma, H., and Utsumi, K.
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- 1986
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17. 640 × 400 green light-emitting TFEL display
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Nunomura, K., primary, Koyama, N., additional, Ishiko, M., additional, Sano, Y., additional, Sakuma, S., additional, and Fujita, Y., additional
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- 1989
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18. Second harmonic generation in a sputtered LiNbO3 film on MgO
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Nunomura, K., primary, Ishitani, A., additional, Matsubara, T., additional, and Hayashi, I., additional
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- 1978
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19. Super DIOS: future x-ray spectroscopic mission to search for dark baryons
- Author
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den Herder, Jan-Willem A., Nikzad, Shouleh, Nakazawa, Kazuhiro, Ohashi, T., Ishisaki, Y., Ezoe, Y., Yamada, S., Hayakawa, R., Nunomura, K., Sato, K., Tawara, Y., Mitsuishi, I., Ohtsuka, K., Mitsuda, K., Yamasaki, N. Y., Kikuchi, T., Hayashi, T., Muramatsu, H., Nakashima, Y., Ota, N., Osato, K., Ichinohe, Y., Eckart, M. E., Bandler, S. R., Kelley, R. L., and Kilbourne, C. A.
- Published
- 2018
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20. Second harmonic generation in a sputtered LiNbO 3 film on MgO
- Author
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Nunomura, K., Ishitani, A., Matsubara, T., and Hayashi, I.
- Published
- 1978
- Full Text
- View/download PDF
21. Cell Surface Labeling and Mass Spectrometry Reveal Diversity of Cell Surface Markers and Signaling Molecules Expressed in Undifferentiated Mouse Embryonic Stem Cells
- Author
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Nunomura, K.
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- 2005
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22. Development of a high-throughput screening system targeting the protein-protein interactions between PRL and CNNM.
- Author
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Funato Y, Mimura M, Nunomura K, Lin B, Fujii S, Haruta J, and Miki H
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- Humans, Animals, Protein Binding, Magnesium metabolism, HEK293 Cells, Neoplasm Proteins metabolism, Neoplasm Proteins antagonists & inhibitors, High-Throughput Screening Assays methods, Protein Tyrosine Phosphatases antagonists & inhibitors, Protein Tyrosine Phosphatases metabolism, Fluorescence Resonance Energy Transfer methods
- Abstract
Phosphatase of regenerating liver (PRL) is an oncogenic protein that promotes tumor progression by directly binding to cyclin M (CNNM) membrane proteins and inhibiting their Mg
2+ efflux activity. In this study, we have developed a high-throughput screening system to detect the interactions between PRL and CNNM proteins based on homogenous time-resolved fluorescence resonance energy transfer (HTR-FRET, HTRF). We optimized the tag sequences attached to the recombinant proteins of the CNNM4 CBS domains and PRL3 lacking the carboxyl terminal CAAX motif, and successfully detected the interaction by observing the FRET signal in the mixture of the tagged proteins and fluorophore-conjugated antibodies. Moreover, we performed compound library screening using this system and discovered several compounds that could efficiently inhibit the PRL-CNNM interaction. Characterization of one candidate compound revealed that it was relatively stable compared with thienopyridone, a known inhibitor of the PRL-CNNM interaction. The candidate compound can also inhibit PRL function in cells: suppression of CNNM-dependent Mg2+ efflux, and has sufficient in vitro drug metabolism and pharmacokinetic properties. Overall, these results demonstrate the effectiveness of this screening system for identifying novel inhibitors of the PRL-CNNM interaction, which could contribute to the development of novel anti-cancer drugs., (© 2024. The Author(s).)- Published
- 2024
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23. Correction: Anti-schistosomal activity and ADMET properties of 1,2,5-oxadiazinane-containing compound synthesized by visible-light photoredox catalysis.
- Author
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Itoh K, Nakahara H, Takashino A, Hara A, Katsuno A, Abe Y, Mizuguchi T, Karaki F, Hirayama S, Nagai K, Seki R, Sato N, Okuyama K, Hashimoto M, Tokunaga K, Ishida H, Mikami F, Kwofie KD, Kawada H, Lin B, Nunomura K, Kanai T, Hatta T, Tsuji N, Haruta J, and Fujii H
- Abstract
[This corrects the article DOI: 10.1039/D4MD00599F.]., (This journal is © The Royal Society of Chemistry.)
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- 2024
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24. Anti -Schistosomal activity and ADMET properties of 1,2,5-oxadiazinane-containing compound synthesized by visible-light photoredox catalysis.
- Author
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Itoh K, Nakahara H, Takashino A, Hara A, Katsuno A, Abe Y, Mizuguchi T, Karaki F, Hirayama S, Nagai K, Seki R, Sato N, Okuyama K, Hashimoto M, Tokunaga K, Ishida H, Mikami F, Kwofie KD, Kawada H, Lin B, Nunomura K, Kanai T, Hatta T, Tsuji N, Haruta J, and Fujii H
- Abstract
The incorporation of saturated nitrogen-containing heterocycle 1,2,5-oxadiazinane into small molecules represents a compelling avenue in drug discovery due to its unexplored behavior within biological systems and incomplete protocols for synthesis. In this study, we present 1,2,5-oxadiazinane, an innovative heterocyclic bioisostere of piperizin-2-one and novel chemotype of the anti -schistosomal drug praziquantel (PZQ), which has been the only clinical drug available for three decades. PZQ is associated with significant drawbacks, including poor solubility, a bitter taste, and low metabolic stability. Therefore, the discovery of a new class of anti -schistosomal agents is imperative. To address this challenge, we introduce a pioneering method for the synthesis of 1,2,5-oxadiazinane derivatives through the cycloaddition of nitrones with N , N , N' , N' -tetraalkyldiaminomethane in the presence of an Ir
III complex photosensitizer. This transformative reaction offers a streamlined route to various kinds of 1,2,5-oxadiazinanes that is characterized by mild reaction conditions and broad substrate scope. Mechanistic investigations suggest that the photoredox pathway underlies the [3 + 3] photocycloaddition process. Thus, based on bioisosteric replacement, we identified a remarkable molecule as a new chemotype of a potent anti -schistosomal compound that not only exhibits superior solubility, but also retains the potent biological activity inherent to PZQ., Competing Interests: There are no conflicts to declare., (This journal is © The Royal Society of Chemistry.)- Published
- 2024
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25. Bayesian approach enabled objective comparison of multiple human iPSC-derived Cardiomyocytes' Proarrhythmia sensitivities.
- Author
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Wakatsuki T, Daily N, Hisada S, Nunomura K, Lin B, Zushida K, Honda Y, Asyama M, and Takasuna K
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- Humans, Cell Line, Calcium metabolism, Computer Simulation, Ion Channels drug effects, Myocytes, Cardiac drug effects, Induced Pluripotent Stem Cells drug effects, Bayes Theorem, Arrhythmias, Cardiac chemically induced
- Abstract
The one-size-fits-all approach has been the mainstream in medicine, and the well-defined standards support the development of safe and effective therapies for many years. Advancing technologies, however, enabled precision medicine to treat a targeted patient population (e.g., HER2+ cancer). In safety pharmacology, computational population modeling has been successfully applied in virtual clinical trials to predict drug-induced proarrhythmia risks against a wide range of pseudo cohorts. In the meantime, population modeling in safety pharmacology experiments has been challenging. Here, we used five commercially available human iPSC-derived cardiomyocytes growing in 384-well plates and analyzed the effects of ten potential proarrhythmic compounds with four concentrations on their calcium transients (CaTs). All the cell lines exhibited an expected elongation or shortening of calcium transient duration with various degrees. Depending on compounds inhibiting several ion channels, such as hERG, peak and late sodium and L-type calcium or IKs channels, some of the cell lines exhibited irregular, discontinuous beating that was not predicted by computational simulations. To analyze the shapes of CaTs and irregularities of beat patterns comprehensively, we defined six parameters to characterize compound-induced CaT waveform changes, successfully visualizing the similarities and differences in compound-induced proarrhythmic sensitivities of different cell lines. We applied Bayesian statistics to predict sample populations based on experimental data to overcome the limited number of experimental replicates in high-throughput assays. This process facilitated the principal component analysis to classify compound-induced sensitivities of cell lines objectively. Finally, the association of sensitivities in compound-induced changes between phenotypic parameters and ion channel inhibitions measured using patch clamp recording was analyzed. Successful ranking of compound-induced sensitivity of cell lines was in lined with visual inspection of raw data., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. T.W. is a cofounder and shareholder of InvivoSciences, Inc. N.D. is an employee of InvivoSciences, Inc., (Copyright © 2023. Published by Elsevier Inc.)
- Published
- 2024
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26. Design and synthesis of 4-acetoxypentanamide derivatives of spliceostatin A and their biological evaluation towards prostate cancer treatment.
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Hirabayashi S, Tsuyuguchi Y, Li Y, Ohta N, Yoshikawa Y, Lin B, Fumimoto M, Nunomura K, Suzuki T, Haruta J, Nimura K, and Arisawa M
- Subjects
- Male, Humans, Pyrans, Receptors, Androgen, Protein Isoforms, Prostatic Neoplasms drug therapy, Spiro Compounds
- Abstract
We designed and synthesized novel 4-acetoxypentanamide derivatives of spliceostatin A, whose 4-acetoxypentenamide moiety is reduced (7), isomerized (8), or substituted with methyl at the α-position (9). The results of biological evaluation against AR-V7 and the docking analysis of each derivative suggest that the geometry of the 4-acetoxypentenamide moiety of spliceostatin A is important for its biological activity., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier Ltd. All rights reserved.)
- Published
- 2023
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27. Celastrol suppresses humoral immune responses and autoimmunity by targeting the COMMD3/8 complex.
- Author
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Shirai T, Nakai A, Ando E, Fujimoto J, Leach S, Arimori T, Higo D, van Eerden FJ, Tulyeu J, Liu YC, Okuzaki D, Murayama MA, Miyata H, Nunomura K, Lin B, Tani A, Kumanogoh A, Ikawa M, Wing JB, Standley DM, Takagi J, and Suzuki K
- Subjects
- Mice, Animals, Autoimmunity, Pentacyclic Triterpenes, Immunity, Humoral, Autoimmune Diseases
- Abstract
Celastrol, a bioactive molecule extracted from the Tripterygium wilfordii plant, has been shown to exhibit anti-inflammatory properties. However, its mechanism of action has not been fully elucidated. Here, we show that celastrol suppresses humoral immune responses and autoimmunity by disabling a protein complex consisting of copper metabolism MURR1 domain-containing (COMMD) 3 and COMMD8 (COMMD3/8 complex), a signaling adaptor for chemoattractant receptors. Having demonstrated the involvement of the COMMD3/8 complex in a mouse model of rheumatoid arthritis, we identified celastrol as a compound that covalently bound to and dissociated the COMMD3/8 complex. Celastrol inhibited B cell migration, reduced antibody responses, and blocked arthritis progression, recapitulating deficiency of the COMMD3/8 complex. These effects of celastrol were abolished in mice expressing a celastrol-resistant mutant of the COMMD3/8 complex. These findings establish that celastrol exerts immunosuppressive activity by targeting the COMMD3/8 complex. Our study suggests that the COMMD3/8 complex is a potentially druggable target in autoimmune diseases and points to celastrol as a lead pharmacologic candidate in this capacity.
- Published
- 2023
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28. Design, Synthesis, and Monoamine Oxidase B Selective Inhibitory Activity of N -Arylated Heliamine Analogues.
- Author
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Yamada M, Hirose Y, Lin B, Fumimoto M, Nunomura K, Natchanun S, Takahashi N, Ohki Y, Sako M, Murai K, Harada K, Arai M, Suzuki S, Nakamura T, Haruta J, and Arisawa M
- Abstract
Monoamine oxidase B (MAO-B) metabolizes monoamines such as dopamine regarding neural transmission and controls its level in the mammalian's brain. When MAO-B metabolizes dopamine abnormally, normal neurotransmission does not occur, and central nervous system disorders such as Parkinson's disease may develop. Although several MAO inhibitors have been developed, most of them have no selectivity between monoamine oxidase A (MAO-A) and MAO-B, or they work irreversibly against the enzyme. This report describes the first case of screening of N -arylated heliamine derivatives to develop novel MAO-B selective inhibitors that can be synthesized concisely by microwave-assisted Pd nanoparticle-catalyzed Buchwald-Hartwig amination. We discovered that the derivatives 4h , 4i , and 4j display inhibitory activity against MAO-B with IC
50 values of 1.55, 13.5, and 5.08 μM, respectively., Competing Interests: The authors declare no competing financial interest., (© 2022 American Chemical Society.)- Published
- 2022
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29. Discovery of Benzylpiperazine Derivatives as CNS-Penetrant and Selective Histone Deacetylase 6 Inhibitors.
- Author
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Hashimoto K, Ide S, Arata M, Nakata A, Ito A, Ito TK, Kudo N, Lin B, Nunomura K, Tsuganezawa K, Yoshida M, Nagaoka Y, and Sumiyoshi T
- Abstract
Inhibition of histone deacetylase 6 (HDAC6) in the brain is a highly attractive therapeutic target for the treatment of neurodegenerative diseases. The low blood-brain barrier permeability of most known HDAC6 inhibitors, however, prevents their application as central nervous system (CNS) drugs. To overcome this problem, we designed and synthesized benzylpiperazine derivatives using a hybrid strategy of combining HDAC6 inhibitors and brain-penetrant histamine H
1 receptor antagonists. Introducing the benzylpiperazine units to the cap region of hydroxamate-type HDAC6 inhibitors led us to identify isozyme-selective and CNS-penetrant HDAC6 inhibitor KH-259 ( 1 ) with the appropriate pharmacokinetic and safety properties. Intraperitoneal administration of KH-259 (10 mg/kg) had antidepressant activity and increased acetylated α-tubulin in the brain without promoting acetylated histone H3K9. These findings indicate that our hybrid strategy of combining HDAC6 inhibitors and histamine H1 receptor antagonists is an effective methodology for designing CNS-penetrant HDAC6 inhibitors., Competing Interests: The authors declare no competing financial interest., (© 2022 American Chemical Society.)- Published
- 2022
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30. The K-Ras(G12D)-inhibitory peptide KS-58 suppresses growth of murine CT26 colorectal cancer cell-derived tumors.
- Author
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Sakamoto K, Lin B, Nunomura K, Izawa T, and Nakagawa S
- Subjects
- Animals, Mice, Cell Line, Tumor, Cell Proliferation, Mutant Proteins genetics, Mutation, Colorectal Neoplasms drug therapy, Colorectal Neoplasms genetics, Peptides therapeutic use, Proto-Oncogene Proteins p21(ras) genetics
- Abstract
Mutations in the cell proliferation regulator K-Ras are found with a variety of cancer types, so drugs targeting these mutant proteins could hold great clinical potential. Very recently, a drug targeting the K-Ras(G12C) mutant observed in lung cancer gained regulatory approval and several clinical trials are currently underway to examine the efficacy of this agent when combined with other drugs such as a monoclonal antibody inhibitor of programmed cell death 1 receptor (anti-PD-1). Alternatively, there are currently no approved drugs targeting K-Ras(G12D), the most common cancer-associated K-Ras mutant. In 2020, we described the development of the K-Ras(G12D) inhibitory bicyclic peptide KS-58 and presented evidence for anticancer activity against mouse xenografts derived from the human pancreatic cancer cell line PANC-1 stably expressing K-Ras(G12D). Here, we show that KS-58 also possess anticancer activity against mouse tumors derived from the colorectal cancer cell line CT26 stably expressing K-Ras(G12D). Further, KS-58 treatment reduced phosphorylation of ERK, a major downstream signaling factor in the Ras pathway, confirming that KS-58 inhibits K-Ras(G12D) function. Unexpectedly; however, KS-58 did not show additive or synergistic anticancer activity with mouse anti-PD-1. Morphological analysis and immunostaining demonstrated no obvious differences in CD8
+ cells infiltration or PD-L1 expression levels in CT26-derived tumors exposed to monotherapy or combination treatment. Nonetheless, KS-58 demonstrated reasonable stability in blood (t1/2 ≈ 30 min) and no obvious systemic adverse effects, suggesting clinical potential as a lead molecule against colorectal cancer., (© 2022. The Author(s).)- Published
- 2022
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31. Physicochemical and Biochemical Evaluation of Amorphous Solid Dispersion of Naringenin Prepared Using Hot-Melt Extrusion.
- Author
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Ishimoto K, Shimada Y, Ohno A, Otani S, Ago Y, Maeda S, Lin B, Nunomura K, Hino N, Suzuki M, and Nakagawa S
- Abstract
Naringenin (NRG) is a plant-derived flavonoid. Due to its antioxidant, anti-inflammatory, and analgesic activities it is beneficial to human health and is often used as a functional food ingredient; however, it has poor water solubility and low in vivo bioavailability. Therefore, the efficacy of NRG can be improved by enhancing its water solubility to increase gastrointestinal absorption. Conventional methods for the formulation of NRG are very complex and use toxic organic solvents, making them impractical for the production of functional foods. The objective of this study was to develop a safe and effective NRG-based functional food material. Previously, we established a technology to prepare amorphous solid dispersions (SDs) from functional food ingredients with poor water solubility and used hot-melt extrusion technology that is comparatively simple and does not involve the use of organic solvents. In this study, we prepared NRG SD and evaluated them both physicochemically and biochemically. NRG SD had superior water solubility and gastrointestinal absorption relative to native NRG and showed higher analgesic efficacy in rats than crystalline NRG. NRG SD was administered to mice in a mixed diet for 28 days, and organ weights and hematological/clinical biochemical parameters were assessed. NRG SD did not demonstrate severe adverse effects. The results suggest that NRG SD is a safe and highly efficacious formulation that can be used as a functional food material in the future., Competing Interests: SO, SM, and MS were employed by Mitsui Norin Co., Ltd. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Ishimoto, Shimada, Ohno, Otani, Ago, Maeda, Lin, Nunomura, Hino, Suzuki and Nakagawa.)
- Published
- 2022
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32. Gosha-jinki-Gan (GJG) shows anti-aging effects through suppression of TNF-α production by Chikusetsusaponin V.
- Author
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Hagihara K, Nunomura K, Lin B, Fumimoto M, Watanabe J, and Mizuhara Y
- Subjects
- Active Transport, Cell Nucleus drug effects, Administration, Oral, Animals, Dose-Response Relationship, Drug, Drug Stability, Drugs, Chinese Herbal chemistry, Male, Mice, Mice, Inbred ICR, Muscle Proteins metabolism, Muscle, Skeletal drug effects, Muscle, Skeletal metabolism, RAW 264.7 Cells, SKP Cullin F-Box Protein Ligases metabolism, Saponins administration & dosage, Saponins blood, Solubility, Transcription Factor RelA metabolism, Tumor Necrosis Factor-alpha pharmacology, Aging drug effects, Drugs, Chinese Herbal pharmacology, Saponins pharmacology, Tumor Necrosis Factor-alpha metabolism
- Abstract
Frailty develops due to multiple factors, such as sarcopenia, chronic pain, and dementia. Go-sha-jinki-Gan (GJG) is a traditional Japanese herbal medicine used for age-related symptoms. We have reported that GJG improved sarcopenia, chronic pain, and central nervous system function through suppression of tumor necrosis factor-alpha (TNF-α) production. In the present study, GJG was found to reduce the production of TNF-α in the soleus muscle of senescence-accelerated mice at 12 weeks and 36 weeks. GJG did not change the differentiation of C2C12 cells with 2% horse serum. GJG significantly decreased the expression of Muscle atrophy F-box protein (MAFbx) induced by TNF-α in C2C12 cells on real-time PCR. TNF-α significantly decreased the expression of PGC-1α and negated the enhancing effect of GJG for the expression of PGC-1α on digital PCR. Examining 20 chemical compounds derived from GJG, cinnamaldehyde from cinnamon bark and Chikusetsusaponin V (CsV) from Achyrantes Root dose-dependently decreased the production of TNF-⍺ in RAW264.7 cells stimulated by LPS. CsV inhibited the nuclear translocation of nuclear factor-kappa B (NF-κB) p65 in RAW264.7 cells. CsV showed low permeability using Caco-2 cells. However, the plasma concentration of CsV was detected from 30 min to 6 h and peaked at 1 h in the CD1 (ICR) mice after a single dose of GJG. In 8-week-old SAMP8 mice fed 4% (w/w) GJG from one week to four weeks, the plasma CsV concentration ranged from 0.0500 to 10.0 ng/mL. The evidence that CsV plays an important role in various anti-aging effects of GJG via suppression of TNF-⍺ expression is presented., (Copyright © 2022 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2022
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33. Measurements of Strong-Interaction Effects in Kaonic-Helium Isotopes at Sub-eV Precision with X-Ray Microcalorimeters.
- Author
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Hashimoto T, Aikawa S, Akaishi T, Asano H, Bazzi M, Bennett DA, Berger M, Bosnar D, Butt AD, Curceanu C, Doriese WB, Durkin MS, Ezoe Y, Fowler JW, Fujioka H, Gard JD, Guaraldo C, Gustafsson FP, Han C, Hayakawa R, Hayano RS, Hayashi T, Hays-Wehle JP, Hilton GC, Hiraiwa T, Hiromoto M, Ichinohe Y, Iio M, Iizawa Y, Iliescu M, Ishimoto S, Ishisaki Y, Itahashi K, Iwasaki M, Ma Y, Murakami T, Nagatomi R, Nishi T, Noda H, Noumi H, Nunomura K, O'Neil GC, Ohashi T, Ohnishi H, Okada S, Outa H, Piscicchia K, Reintsema CD, Sada Y, Sakuma F, Sato M, Schmidt DR, Scordo A, Sekimoto M, Shi H, Shirotori K, Sirghi D, Sirghi F, Suzuki K, Swetz DS, Takamine A, Tanida K, Tatsuno H, Trippl C, Uhlig J, Ullom JN, Yamada S, Yamaga T, Yamazaki T, and Zmeskal J
- Abstract
We have measured the 3d→2p transition x rays of kaonic ^{3}He and ^{4}He atoms using superconducting transition-edge-sensor microcalorimeters with an energy resolution better than 6 eV (FWHM). We determined the energies to be 6224.5±0.4(stat)±0.2(syst) eV and 6463.7±0.3(stat)±0.1(syst) eV, and widths to be 2.5±1.0(stat)±0.4(syst) eV and 1.0±0.6(stat)±0.3(stat) eV, for kaonic ^{3}He and ^{4}He, respectively. These values are nearly 10 times more precise than in previous measurements. Our results exclude the large strong-interaction shifts and widths that are suggested by a coupled-channel approach and agree with calculations based on optical-potential models.
- Published
- 2022
- Full Text
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34. Design and synthesis of pyrido[2,3-d]pyrimidine derivatives for a novel PAC1 receptor antagonist.
- Author
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Takasaki I, Watanabe A, Okada T, Kanayama D, Nagashima R, Shudo M, Shimodaira A, Nunomura K, Lin B, Watanabe Y, Gouda H, Miyata A, Kurihara T, and Toyooka N
- Subjects
- Animals, Hyperalgesia, Mice, Pituitary Adenylate Cyclase-Activating Polypeptide pharmacology, Pyrimidines pharmacology, Neuralgia, Receptors, Pituitary Adenylate Cyclase-Activating Polypeptide, Type I
- Abstract
Since PA-8 (5-(4-(Allyloxy)-3-methoxyphenyl)-2-amino-5,8-dihydro-3H,6H-pyrido[2,3-d]pyrimidine-4,7-dione) was recently identified as a novel small-molecule antagonist of the pituitary adenylate cyclase-activating polypeptide (PACAP) type I (PAC1) receptor, a series of pyrido[2,3-d]pyrimidine derivatives have been designed, synthesized and subsequently evaluated for antagonistic activity on the PAC1 receptor. In this study, we synthesized 21 derivatives based on the PA-8 structure. Among them, the compound 2o (2-Amino-5-(3-trifluoromethoxy-phenyl)-5,8-dihydro-3H,6H-pyrido[2,3-d]pyrimidine-4,7-dione) showed more potent antagonistic activities than PA-8. Intrathecal (i.t.) injection of 2o blocked the induction of PACAP-induced aversive behaviors and mechanical allodynia in mice, and the effects were more potent than those of PA-8. A single i.t. injection of 2o also inhibited spinal nerve ligation (SNL)-induced mechanical allodynia. Repeated intraperitoneal administration of 2o gradually reduced the SNL-induced mechanical allodynia, and this effect appeared earlier than for PA-8. In addition, 2o exhibited a favorable ADME and pharmacokinetics profiles. These results suggest that 2o may become an analgesic for the treatment of neuropathic pain., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier Masson SAS. All rights reserved.)
- Published
- 2022
- Full Text
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35. Microtubule inhibitors identified through nonbiased screening enhance DNA transfection efficiency by delaying p62-dependent ubiquitin recruitment.
- Author
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Tsuchiya M, Ogawa H, Watanabe K, Koujin T, Mori C, Nunomura K, Lin B, Tani A, Hiraoka Y, and Haraguchi T
- Subjects
- Animals, Cells, Cultured, Colchicine pharmacology, Endocytosis, Fibroblasts drug effects, Fibroblasts metabolism, High-Throughput Screening Assays methods, Mice, Microtubules metabolism, Sequestosome-1 Protein metabolism, Ubiquitin metabolism, Vinblastine pharmacology, Microtubules drug effects, Small Molecule Libraries pharmacology, Transfection methods, Tubulin Modulators pharmacology, Ubiquitination
- Abstract
Ectopic gene expression is an indispensable tool in biology and medicine, but is often limited by the low efficiency of DNA transfection. We previously reported that depletion of the autophagy receptor p62/SQSTM1 enhances DNA transfection efficiency by preventing the degradation of transfected DNA. Therefore, p62 is a potential target for drugs to increase transfection efficiency. To identify such drugs, a nonbiased high-throughput screening was applied to over 4,000 compounds from the Osaka University compound library, and their p62 dependency was evaluated. The top-scoring drugs were mostly microtubule inhibitors, such as colchicine and vinblastine, and all of them showed positive effects only in the presence of p62. To understand the p62-dependent mechanisms, the time required for p62-dependent ubiquitination, which is required for autophagosome formation, was examined using polystyrene beads that were introduced into cells as materials that mimicked transfected DNA. Microtubule inhibitors caused a delay in ubiquitination. Furthermore, the level of phosphorylated p62 at S405 was markedly decreased in the drug-treated cells. These results suggest that microtubule inhibitors inhibit p62-dependent autophagosome formation. Our findings demonstrate for the first time that microtubule inhibitors suppress p62 activation as a mechanism for increasing DNA transfection efficiency and provide solutions to increase efficiency., (© 2021 Molecular Biology Society of Japan and John Wiley & Sons Australia, Ltd.)
- Published
- 2021
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36. A novel RyR1-selective inhibitor prevents and rescues sudden death in mouse models of malignant hyperthermia and heat stroke.
- Author
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Yamazawa T, Kobayashi T, Kurebayashi N, Konishi M, Noguchi S, Inoue T, Inoue YU, Nishino I, Mori S, Iinuma H, Manaka N, Kagechika H, Uryash A, Adams J, Lopez JR, Liu X, Diggle C, Allen PD, Kakizawa S, Ikeda K, Lin B, Ikemi Y, Nunomura K, Nakagawa S, Sakurai T, and Murayama T
- Subjects
- Animals, Halothane pharmacology, Isoflurane pharmacology, Mice, Muscle, Skeletal drug effects, Muscle, Skeletal metabolism, Mutation genetics, Calcium metabolism, Calcium Channel Blockers therapeutic use, Malignant Hyperthermia drug therapy, Malignant Hyperthermia metabolism, Ryanodine Receptor Calcium Release Channel metabolism
- Abstract
Mutations in the type 1 ryanodine receptor (RyR1), a Ca
2+ release channel in skeletal muscle, hyperactivate the channel to cause malignant hyperthermia (MH) and are implicated in severe heat stroke. Dantrolene, the only approved drug for MH, has the disadvantages of having very poor water solubility and long plasma half-life. We show here that an oxolinic acid-derivative RyR1-selective inhibitor, 6,7-(methylenedioxy)-1-octyl-4-quinolone-3-carboxylic acid (Compound 1, Cpd1), effectively prevents and treats MH and heat stroke in several mouse models relevant to MH. Cpd1 reduces resting intracellular Ca2+ , inhibits halothane- and isoflurane-induced Ca2+ release, suppresses caffeine-induced contracture in skeletal muscle, reduces sarcolemmal cation influx, and prevents or reverses the fulminant MH crisis induced by isoflurane anesthesia and rescues animals from heat stroke caused by environmental heat stress. Notably, Cpd1 has great advantages of better water solubility and rapid clearance in vivo over dantrolene. Cpd1 has the potential to be a promising candidate for effective treatment of patients carrying RyR1 mutations., (© 2021. The Author(s).)- Published
- 2021
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37. Structural development of 1H-pyrazolo-[3,4-b]pyridine-4-carboxylic acid derivatives as human peroxisome proliferator-activated receptor alpha (PPARα)-selective agonists.
- Author
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Miyachi H, Yuzuriha T, Tabata R, Fukuda S, Nunomura K, Lin B, Kobayashi T, Ishimoto K, Doi T, and Tachibana K
- Subjects
- Humans, Molecular Structure, Structure-Activity Relationship, PPAR alpha agonists, Pyridines chemistry
- Abstract
We previously reported that 1H-pyrazolo-[3,4-b]pyridine-4-carboxylic acid derivative 6 is an agonist of human peroxisome proliferator-activated receptor alpha (hPPARα). Here, we prepared a series of 1H-pyrazolo-[3,4-b]pyridine-4-carboxylic acid derivatives in order to examine the structure-activity relationships (SAR). SAR studies clearly indicated that the steric bulkiness of the substituent on 1H-pyrazolo-[3,4-b]pyridine ring, the position of the distal hydrophobic tail part, and the distance between the distal hydrophobic tail part and the acidic head part are critical for hPPARα agonistic activity. These SAR results are somewhat different from those reported for fibrate-class hPPARα agonists. A representative compound (10f) was as effective as fenofibrate in reducing the elevated plasma triglyceride levels in a high-fructose-fed rat model., (Copyright © 2019 Elsevier Ltd. All rights reserved.)
- Published
- 2019
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38. Discovery of peroxisome proliferator-activated receptor α (PPARα) activators with a ligand-screening system using a human PPARα-expressing cell line.
- Author
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Tachibana K, Yuzuriha T, Tabata R, Fukuda S, Maegawa T, Takahashi R, Tanimoto K, Tsujino H, Nunomura K, Lin B, Matsuura Y, Tanaka T, Hamakubo T, Sakai J, Kodama T, Kobayashi T, Ishimoto K, Miyachi H, and Doi T
- Subjects
- Animals, Drug Evaluation, Preclinical, Fructose adverse effects, Genes, Reporter genetics, Humans, Hypolipidemic Agents pharmacology, Ligands, Rats, Gene Expression Regulation drug effects, PPAR alpha genetics, PPAR alpha metabolism
- Abstract
Peroxisome proliferator-activated receptor α (PPARα) is a ligand-activated transcription factor that belongs to the superfamily of nuclear hormone receptors. PPARα is mainly expressed in the liver, where it activates fatty acid oxidation and lipoprotein metabolism and improves plasma lipid profiles. Therefore, PPARα activators are often used to treat patients with dyslipidemia. To discover additional PPARα activators as potential compounds for use in hypolipidemic drugs, here we established human hepatoblastoma cell lines with luciferase reporter expression from the promoters containing peroxisome proliferator-responsive elements (PPREs) and tetracycline-regulated expression of full-length human PPARα to quantify the effects of chemical ligands on PPARα activity. Using the established cell-based PPARα-activator screening system to screen a library of >12,000 chemical compounds, we identified several hit compounds with basic chemical skeletons different from those of known PPARα agonists. One of the hit compounds, a 1H-pyrazolo[3,4-b]pyridine-4-carboxylic acid derivative we termed compound 3, selectively up-regulated PPARα transcriptional activity, leading to PPARα target gene expression both in vitro and in vivo Of note, the half-maximal effective concentrations of the hit compounds were lower than that of the known PPARα ligand fenofibrate. Finally, fenofibrate or compound 3 treatment of high fructose-fed rats having elevated plasma triglyceride levels for 14 days indicated that compound 3 reduces plasma triglyceride levels with similar efficiency as fenofibrate. These observations raise the possibility that 1H-pyrazolo[3,4-b]pyridine-4-carboxylic acid derivatives might be effective drug candidates for selective targeting of PPARα to manage dyslipidemia., (© 2018 Tachibana et al.)
- Published
- 2018
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39. Semisynthesis and biological evaluation of a cotylenin A mimic derived from fusicoccin A.
- Author
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Inoue T, Higuchi Y, Yoneyama T, Lin B, Nunomura K, Honma Y, and Kato N
- Subjects
- 14-3-3 Proteins metabolism, Antineoplastic Agents chemical synthesis, Antineoplastic Agents chemistry, Cell Line, Tumor, Diterpenes chemical synthesis, Diterpenes chemistry, Glycosides chemical synthesis, Glycosides chemistry, Humans, Molecular Structure, Protein Stability, Stereoisomerism, Structure-Activity Relationship, Antineoplastic Agents pharmacology, Diterpenes pharmacology, Glycosides pharmacology
- Abstract
In an effort to overcome the unavailability of cotylenin A (CN A), an anticancer agent and a stabilizer of protein-protein interactions (PPIs) mediated by 14-3-3 proteins, ISIR-050 was designed as a CN A mimic. The synthesis was accomplished via a semisynthetic approach starting from fusicoccin A. ISIR-050 showed interferon-α (IFNα)-dependent growth inhibitory activity and a PPI stabilization effect similar to those of CN A. The biochemical analysis suggested that ISIR-050 and CN A induce the same pharmacological response to IFNα-treated cancer cells and that 14-3-3 proteins play a role in the mode of action., (Copyright © 2018 Elsevier Ltd. All rights reserved.)
- Published
- 2018
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40. Unbiased compound screening with a reporter gene assay highlights the role of p13 in the cardiac cellular stress response.
- Author
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Inoue N, Hirouchi T, Kasai A, Higashi S, Hiraki N, Tanaka S, Nakazawa T, Nunomura K, Lin B, Omori A, Hayata-Takano A, Kim YJ, Doi T, Baba A, Hashimoto H, and Shintani N
- Subjects
- Genes, Reporter, HeLa Cells, Humans, Cardiac Glycosides metabolism, Drug Evaluation, Preclinical methods, Glycoproteins metabolism, High-Throughput Screening Assays methods, Molecular Chaperones metabolism, Myocytes, Cardiac metabolism, Oxidative Stress physiology, Protein Interaction Mapping methods
- Abstract
We recently showed that a 13-kDa protein (p13), the homolog protein of formation of mitochondrial complex V assembly factor 1 in yeast, acts as a potential protective factor in pancreatic islets under diabetes. Here, we aimed to identify known compounds regulating p13 mRNA expression to obtain therapeutic insight into the cellular stress response. A luciferase reporter system was developed using the putative promoter region of the human p13 gene. Overexpression of peroxisome proliferator-activated receptor gamma coactivator 1α, a master player regulating mitochondrial metabolism, increased both reporter activity and p13 expression. Following unbiased screening with 2320 known compounds in HeLa cells, 12 pharmacological agents (including 8 cardiotonics and 2 anthracyclines) that elicited >2-fold changes in p13 mRNA expression were identified. Among them, four cardiac glycosides decreased p13 expression and concomitantly elevated cellular oxidative stress. Additional database analyses showed highest p13 expression in heart, with typically decreased expression in cardiac disease. Accordingly, our results illustrate the usefulness of unbiased compound screening as a method for identifying novel functional roles of unfamiliar genes. Our findings also highlight the importance of p13 in the cellular stress response in heart., (Copyright © 2017. Published by Elsevier Inc.)
- Published
- 2018
- Full Text
- View/download PDF
41. Opposing roles for SNAP23 in secretion in exocrine and endocrine pancreatic cells.
- Author
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Kunii M, Ohara-Imaizumi M, Takahashi N, Kobayashi M, Kawakami R, Kondoh Y, Shimizu T, Simizu S, Lin B, Nunomura K, Aoyagi K, Ohno M, Ohmuraya M, Sato T, Yoshimura SI, Sato K, Harada R, Kim YJ, Osada H, Nemoto T, Kasai H, Kitamura T, Nagamatsu S, and Harada A
- Subjects
- Acinar Cells metabolism, Acinar Cells ultrastructure, Amylases metabolism, Animals, Cell Fusion, Exocytosis, Glucose Transporter Type 4 metabolism, Insulin metabolism, Insulin Secretion, Mice, Knockout, Microscopy, Fluorescence, Multiphoton, Models, Biological, Parotid Gland cytology, Protein Transport, Qb-SNARE Proteins deficiency, Qc-SNARE Proteins deficiency, SNARE Proteins metabolism, Secretory Vesicles metabolism, Synaptosomal-Associated Protein 25 metabolism, Islets of Langerhans cytology, Pancreas, Exocrine cytology, Qb-SNARE Proteins metabolism, Qc-SNARE Proteins metabolism
- Abstract
The membrane fusion of secretory granules with plasma membranes is crucial for the exocytosis of hormones and enzymes. Secretion disorders can cause various diseases such as diabetes or pancreatitis. Synaptosomal-associated protein 23 (SNAP23), a soluble N-ethyl-maleimide sensitive fusion protein attachment protein receptor (SNARE) molecule, is essential for secretory granule fusion in several cell lines. However, the in vivo functions of SNAP23 in endocrine and exocrine tissues remain unclear. In this study, we show opposing roles for SNAP23 in secretion in pancreatic exocrine and endocrine cells. The loss of SNAP23 in the exocrine and endocrine pancreas resulted in decreased and increased fusion of granules to the plasma membrane after stimulation, respectively. Furthermore, we identified a low molecular weight compound, MF286, that binds specifically to SNAP23 and promotes insulin secretion in mice. Our results demonstrate opposing roles for SNAP23 in the secretion mechanisms of the endocrine and exocrine pancreas and reveal that the SNAP23-binding compound MF286 may be a promising drug for diabetes treatment., (© 2016 Kunii et al.)
- Published
- 2016
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42. Internal trapping following proximal clipping for a ruptured partially thrombosed giant aneurysm of the vertebral artery--case report.
- Author
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Terakawa Y, Yamamura A, Murayama N, Kimura H, Nakagawa T, Fujishige M, Nunomura K, Ogawa D, and Hashi K
- Subjects
- Aneurysm, Ruptured complications, Aneurysm, Ruptured diagnostic imaging, Aneurysm, Ruptured therapy, Cerebral Angiography, Combined Modality Therapy, Cranial Nerve Diseases etiology, Craniotomy, Drainage, Embolization, Therapeutic, Emergencies, Female, Humans, Intracranial Aneurysm complications, Intracranial Aneurysm diagnostic imaging, Intracranial Aneurysm therapy, Intracranial Thrombosis diagnostic imaging, Intracranial Thrombosis etiology, Magnetic Resonance Imaging, Middle Aged, Paresis etiology, Reoperation, Respiration, Artificial, Respiratory Insufficiency etiology, Respiratory Insufficiency therapy, Subarachnoid Hemorrhage etiology, Vertebral Artery diagnostic imaging, Aneurysm, Ruptured surgery, Intracranial Aneurysm surgery, Intracranial Thrombosis surgery, Vertebral Artery surgery
- Abstract
A 52-year-old woman presented with a partially thrombosed giant aneurysm of the vertebral artery (VA) manifesting as a 3-month history of left hemiparesis. She developed subarachnoid hemorrhage during hospitalization and underwent emergency surgery for surgical proximal clipping and ventricular drainage with decompressive suboccipital craniectomy. She underwent additional surgery for endovascular coil embolization of the aneurysm and the affected distal VA on the 7th postoperative day. Although she suffered transient lower cranial nerve pareses and respiratory failure, her neurological condition improved gradually and she returned home with only slight ataxia and hoarseness 3 months after surgery. Magnetic resonance imaging obtained 28 months postoperatively revealed a remarkable decrease in the size of the aneurysm as well as reduction of the mass effect on the brainstem. Combined proximal clipping and internal trapping can solve the problems associated with treatment of giant aneurysms of VA by either direct surgery or endovascular surgery, and should be considered as a therapeutic option for giant aneurysms of the VA.
- Published
- 2008
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43. MARCKS-like protein, a membrane protein identified for its expression in developing neural retina, plays a role in regulating retinal cell proliferation.
- Author
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Zhao J, Izumi T, Nunomura K, Satoh S, and Watanabe S
- Subjects
- Animals, Cell Differentiation, Cell Movement, Cell Proliferation, Cells, Cultured, Intracellular Signaling Peptides and Proteins classification, Intracellular Signaling Peptides and Proteins genetics, Membrane Proteins classification, Membrane Proteins genetics, Mice, Mice, Inbred ICR, Mutation genetics, Myristoylated Alanine-Rich C Kinase Substrate, NIH 3T3 Cells, Phosphorylation, Proteomics, RNA, Messenger genetics, Retina embryology, Retina growth & development, Sensitivity and Specificity, Gene Expression Regulation, Developmental, Intracellular Signaling Peptides and Proteins metabolism, Membrane Proteins metabolism, Neurons metabolism, Retina cytology, Retina metabolism
- Abstract
Membrane proteins are expressed in a specific manner in developing tissues, and characterization of these proteins is valuable because it allows them to be used as cell surface markers. Furthermore, they are potentially important for the regulation of organogenesis because some may participate in signal transduction. In the present study, we used proteomics to examine the comprehensive protein expression profile of the membrane fraction in the embryonic and adult mouse retina. We purified the retinal membrane fraction by sucrose-density-gradient centrifugation and analysed total proteins using shotgun analysis on a nanoflow LC-MS/MS (liquid chromatography tandem MS) system. Approximately half of the 326 proteins from the adult retina and a quarter of the 310 proteins from the embryonic retina (day 17) appeared to be membrane-associated proteins. Among these, MLP [MARCKS (myristoylated alanine-rich C-kinase substrate)-like protein], which shares approx. 50% amino acid identity with MARCKS, was selected for further characterization. The mRNA and surface protein expression of MLP decreased as retinal development progressed. Overexpression of MLP by retrovirus-mediated gene transfer enhanced the proliferation of retinal progenitor cells without affecting differentiation or cell migration in a retinal explant culture system. In contrast, MLP overexpression did not promote proliferation in fibroblasts (NIH 3T3 cells). Mutation analysis of MLP demonstrated that myristoylation was necessary to promote proliferation and that phosphorylation inhibited proliferation, indicating the functional importance of membrane localization.
- Published
- 2007
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- View/download PDF
44. Reversible diffusion-weighted imaging changes in the splenium of the corpus callosum and internal capsule associated with hypoglycemia - case report - .
- Author
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Terakawa Y, Tsuyuguchi N, Nunomura K, Murayama N, Fujishige M, Yamamura A, Nakagawa T, and Hashi K
- Subjects
- Diabetes Mellitus, Type 1 pathology, Diagnosis, Differential, Diffusion Magnetic Resonance Imaging, Humans, Hypoglycemia etiology, Male, Middle Aged, Paresis etiology, Stroke pathology, Corpus Callosum pathology, Diabetes Mellitus, Type 1 complications, Hypoglycemia pathology, Internal Capsule pathology, Paresis pathology
- Abstract
A 63-year-old man presented with hypoglycemia-induced hemiparesis manifesting as diffusion-weighted magnetic resonance (MR) imaging changes in the splenium of the corpus callosum and internal capsule which disappeared after glucose administration. Clinicians should be aware that hypoglycemia can cause reversible splenium abnormalities on MR imaging, although the underlying mechanism still remains unclear, as this may be helpful in the differential diagnosis of hypoglycemia-induced hemiparesis and stroke.
- Published
- 2007
- Full Text
- View/download PDF
45. [Utility and problems of the brain dock].
- Author
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Nunomura K and Hashi K
- Subjects
- Humans, Outpatient Clinics, Hospital, Brain Diseases diagnosis, Cerebrovascular Disorders diagnosis, Stroke prevention & control
- Published
- 2006
46. A glycoprotein from Spirometra erinaceieuropaei plerocercoids suppresses osteoclastogenesis and proinflammatory cytokine gene expression.
- Author
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Kina Y, Fukumoto S, Miura K, Tademoto S, Nunomura K, Dirgahayu P, and Hirai K
- Subjects
- Animals, Biological Factors pharmacology, Bone Marrow Cells cytology, Bone Marrow Cells drug effects, Carrier Proteins antagonists & inhibitors, Carrier Proteins physiology, Cell Differentiation drug effects, Cell Line, Cytokines genetics, Gene Expression Regulation drug effects, Glycoproteins isolation & purification, Helminth Proteins isolation & purification, Interleukin-1 biosynthesis, Interleukin-1 genetics, Lipopolysaccharides immunology, Membrane Glycoproteins antagonists & inhibitors, Membrane Glycoproteins physiology, Mice, Osteoclasts physiology, RANK Ligand, Receptor Activator of Nuclear Factor-kappa B, Reverse Transcriptase Polymerase Chain Reaction methods, Tumor Necrosis Factor-alpha biosynthesis, Tumor Necrosis Factor-alpha genetics, Cytokines biosynthesis, Glycoproteins pharmacology, Helminth Proteins pharmacology, Osteoclasts drug effects, Spirometra chemistry
- Abstract
Various parasites modify the immune-reactions of the host. We have previously shown that crude excretory/secretory (ES) products from plerocercoids of Spirometra erinaceieuropaei, the plerocercoids of which cause sparganosis in humans, suppress the expression of tumor necrosis factor (TNF)-alpha and IL-1beta in lipopolysaccharide (LPS)-stimulated macrophages. As osteoclasts are cells of the monocyte/macrophage lineage, we hypothesised that ES products might suppress receptor activator of nuclear factor kappaB ligand-induced osteoclastogenesis. Crude ES products from plerocercoids suppressed osteoclastogenesis, judged by tartrate-resistant acid phosphatase (TRAP)-positive multinuclear cell counting, and the mature osteoclast-specific gene expression (calcitonin receptor and TRAP). Second, we purified the inhibitory factor for osteoclastogenesis from the crude ES products. The factor was a trypsin-sensitive glycoprotein and had a relative molecular mass of 90 kDa. The glycoprotein, plerocercoid-immunosuppressive factor, from crude ES products could suppress the gene expression of TNF-alpha, IL-1beta and NO synthesis in LPS-stimulated RAW264.7 macrophages.
- Published
- 2005
- Full Text
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47. Large-scale identification of proteins expressed in mouse embryonic stem cells.
- Author
-
Nagano K, Taoka M, Yamauchi Y, Itagaki C, Shinkawa T, Nunomura K, Okamura N, Takahashi N, Izumi T, and Isobe T
- Subjects
- Animals, Cell Line, Embryo, Mammalian, Gene Expression Regulation, Humans, Mass Spectrometry, Mice, Molecular Sequence Data, Protein Array Analysis, Protein Processing, Post-Translational, Stem Cells cytology, Transcription Factors analysis, Proteome analysis, Stem Cells physiology
- Abstract
A protein subset expressed in the mouse embryonic stem (ES) cell line, E14-1, was characterized by mass spectrometry-based protein identification technology and data analysis. In total, 1790 proteins including 365 potential nuclear and 260 membrane proteins were identified from tryptic digests of total cell lysates. The subset contained a variety of proteins in terms of physicochemical characteristics, subcellular localization, and biological function as defined by Gene Ontology annotation groups. In addition to many housekeeping proteins found in common with other cell types, the subset contained a group of regulatory proteins that may determine unique ES cell functions. We identified 39 transcription factors including Oct-3/4, Sox-2, and undifferentiated embryonic cell transcription factor I, which are characteristic of ES cells, 88 plasma membrane proteins including cell surface markers such as CD9 and CD81, 44 potential proteinaceous ligands for cell surface receptors including growth factors, cytokines, and hormones, and 100 cell signaling molecules. The subset also contained the products of 60 ES-specific and 41 stemness genes defined previously by the DNA microarray analysis of Ramalho-Santos et al. (Ramalho-Santos et al., Science 2002, 298, 597-600), as well as a number of components characteristic of differentiated cell types such as hematopoietic and neural cells. We also identified potential post-translational modifications in a number of ES cell proteins including five Lys acetylation sites and a single phosphorylation site. To our knowledge, this study provides the largest proteomic dataset characterized to date for a single mammalian cell species, and serves as a basic catalogue of a major proteomic subset that is expressed in mouse ES cells.
- Published
- 2005
- Full Text
- View/download PDF
48. In vivo cross-linking of nucleosomal histones catalyzed by nuclear transglutaminase in starfish sperm and its induction by egg jelly triggering the acrosome reaction.
- Author
-
Nunomura K, Kawakami S, Shimizu T, Hara T, Nakamura K, Terakawa Y, Yamasaki A, and Ikegami S
- Subjects
- Acrosome Reaction drug effects, Amino Acid Sequence, Animals, Binding Sites, Cadaverine analogs & derivatives, Calcium chemistry, Calcium metabolism, Chromatin chemistry, Cross-Linking Reagents pharmacology, Dimerization, Female, Histones genetics, Histones immunology, Male, Mice, Mice, Inbred BALB C, Micrococcal Nuclease metabolism, Molecular Sequence Data, Ovum chemistry, Spermatozoa drug effects, Spleen cytology, Acrosome Reaction physiology, Cell Nucleus enzymology, Histones chemistry, Histones metabolism, Nucleosomes metabolism, Ovum physiology, Spermatozoa physiology, Starfish physiology, Transglutaminases metabolism
- Abstract
A histone heterodimer, designated as p28, which contains an Nepsilon(gamma-glutamyl)lysine cross-link between Gln9 of histone H2B and Lys5 or Lys12 of histone H4, is present in starfish (Asterina pectinifera) sperm. Treatment of sperm nuclei with micrococcal nuclease produced soluble chromatin, which was size-fractionated by sucrose-gradient centrifugation to give p28-containing oligonucleosome and p28-free mononucleosome fractions, indicating that the cross-link is internucleosomal. When sperm nuclei were incubated with monodansylcadaverine, a fluorescent amine, in the presence or absence of Ca(2+), histone H2B was modified only in the presence of Ca(2+). Gln9, in the N-terminal region, was modified, but the other Gln residues located in the internal region were not, suggesting that the modification takes place on the surface of the nucleosome core by the in situ action of a Ca(2+)-dependent nuclear transglutaminase. Treatment of sperm with the egg jelly, which activates Ca(2+) influx to induce the acrosome reaction, resulted in a significant elevation of the p28 content in the nucleus. This is the first demonstration of an in vivo activation of transglutaminase leading to the formation of a cross-link in intracellular proteins.
- Published
- 2003
- Full Text
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49. A craniocervical injury-induced syringomyelia caused by central canal dilation secondary to acquired tonsillar herniation. Case report.
- Author
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Takamura Y, Kawasaki T, Takahashi A, Nunomura K, Tiba K, Hasunuma M, and Itou T
- Subjects
- Adult, Arnold-Chiari Malformation diagnosis, Arnold-Chiari Malformation etiology, Arnold-Chiari Malformation surgery, Cerebellar Diseases diagnosis, Cerebellar Diseases surgery, Cerebellum pathology, Cerebellum surgery, Decompression, Surgical, Dilatation, Pathologic diagnosis, Dilatation, Pathologic surgery, Disease Progression, Encephalocele diagnosis, Encephalocele surgery, Follow-Up Studies, Head Injuries, Closed diagnosis, Head Injuries, Closed surgery, Humans, Magnetic Resonance Imaging, Male, Neck Injuries diagnosis, Neck Injuries surgery, Spinal Canal surgery, Syringomyelia diagnosis, Syringomyelia surgery, Cerebellar Diseases etiology, Encephalocele etiology, Head Injuries, Closed complications, Neck Injuries complications, Spinal Canal pathology, Syringomyelia etiology
- Abstract
The authors report on a 19-year-old man with an acquired tonsillar herniation caused by a craniocervical junction injury in which serial magnetic resonance (MR) images demonstrated patent and isolated segments of the central canal participating in the dilation and then formation of a cervical syrinx. The patient was involved in a motor vehicle accident; he developed tonsillar herniation as a complication of subarachnoid and epidural hemorrhage, predominantly observed around the cisterna magna and upper cervical canal. Repeated MR images obtained over an 11-month period indicated the for mation and acute enlargement of the syrinx. Ten months after the accident, the patient presented with sensory disturbance in both upper extremities and spasticity due to syringomyelia. He underwent craniocervical decompressive surgery and doraplasty, which reduced the size of syringomyelia. The authors postulate that the patent central canal may play a role in determining the location of a syrinx remote from a focus of cerebrospinal fluid obstruction.
- Published
- 2001
- Full Text
- View/download PDF
50. Structure of a covalently cross-linked form of core histones present in the starfish sperm.
- Author
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Shimizu T, Takao T, Hozumi K, Nunomura K, Ohta S, Shimonishi Y, and Ikegami S
- Subjects
- Amino Acid Sequence, Animals, Cross-Linking Reagents, Dimerization, Glutamine chemistry, Histones isolation & purification, Lysine chemistry, Magnetic Resonance Spectroscopy, Male, Molecular Sequence Data, Serine Endopeptidases, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Starfish, Histones chemistry, Spermatozoa chemistry
- Abstract
The post-translational modification of core histones plays an essential role in chromatin remodeling processes. We recently reported the occurrence of a novel histone modification, involving a epsilon-(gamma-glutamyl)lysine cross-link between a glutamine residue of histone H2B and a lysine residue of histone H4 in the testis of the starfish, Asterina pectinifera[Shimizu, T., Hozumi, K., Horiike, S., Nunomura, K., Ikegami, S., Takao, T., and Shimonishi, Y. (1996) Nature 380, 32]. In order to determine the complete structure of the modified histone heterodimer, p28 from both testis and sperm was purified. p28 was digested with Achromobacter lyticus protease I or Staphylococcus aureus V8 protease to give proteolytic fragments that were separated by HPLC. Amino acid analysis, sequencing, and mass spectrometric analysis of the fragments showed that the amino acid sequences of these fragments are identical to those of both histones H2B and H4, except for two NH2-terminal peptides obtained by digestion with A. lyticus protease I. One of the peptides, K8, was identical to that reported previously, and the other was a here-to-fore unidentified peptide, which was designated K10. Amino acid and positive-ion FAB-MS/MS analyses of K10 showed that it to be a fragment, derived from Gly8-Lys10 of histone H2B and Gly9-Lys16 of histone H4. The yields of K8 and K10 were calculated to be 47 and 42%, respectively, expressed as the percent of the total amount of p28 used in the experiment. Based on these data, the structure of p28 was determined to be a heterodimer, composed of histones H2B and H4, formed through a transglutaminase-catalyzed acyl transfer reaction between Gln9 of histone H2B and Lys5 or Lys12 of histone H4.
- Published
- 1997
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