47 results on '"Oakley, Erin"'
Search Results
2. Adverse maternal, fetal, and newborn outcomes among pregnant women with SARS-CoV-2 infection: an individual participant data meta-analysis
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Smith, Emily R, Oakley, Erin, Grandner, Gargi Wable, Ferguson, Kacey, Farooq, Fouzia, Afshar, Yalda, Ahlberg, Mia, Ahmadzia, Homa, Akelo, Victor, Aldrovandi, Grace, Barr, Beth A Tippett, Bevilacqua, Elisa, Brandt, Justin S, Broutet, Nathalie, Buhigas, Irene Fernández, Carrillo, Jorge, Clifton, Rebecca, Conry, Jeanne, Cosmi, Erich, Crispi, Fatima, Crovetto, Francesca, Delgado-López, Camille, Divakar, Hema, Driscoll, Amanda J, Favre, Guillaume, Flaherman, Valerie J, Gale, Chris, Gil, Maria M, Gottlieb, Sami L, Gratacós, Eduard, Hernandez, Olivia, Jones, Stephanie, Kalafat, Erkan, Khagayi, Sammy, Knight, Marian, Kotloff, Karen, Lanzone, Antonio, Le Doare, Kirsty, Lees, Christoph, Litman, Ethan, Lokken, Erica M, Longo, Valentina Laurita, Madhi, Shabir A, Magee, Laura A, Martinez-Portilla, Raigam Jafet, McClure, Elizabeth M, Metz, Tori D, Miller, Emily S, Money, Deborah, Moungmaithong, Sakita, Mullins, Edward, Nachega, Jean B, Nunes, Marta C, Onyango, Dickens, Panchaud, Alice, Poon, Liona C, Raiten, Daniel, Regan, Lesley, Rukundo, Gordon, Sahota, Daljit, Sakowicz, Allie, Sanin-Blair, Jose, Söderling, Jonas, Stephansson, Olof, Temmerman, Marleen, Thorson, Anna, Tolosa, Jorge E, Townson, Julia, Valencia-Prado, Miguel, Visentin, Silvia, von Dadelszen, Peter, Waldorf, Kristina Adams, Whitehead, Clare, Yassa, Murat, Tielsch, Jim M, Langenegger, Eduard, Sam-Agudu, Nadia A, Gachuno, Onesmus W, Sekikubo, Musa, Mukwege, Denis M, Omore, Richard, Ouma, Gregory, Onyango, Clayton, Otieno, Kephas, Were, Zacchaeus Abaja, Were, Joyce, İlter, Pinar Birol, Mboizi, Robert, Hookham, Lauren, Meli, Federica, Bonanni, Giulia, Romanzi, Federica, Torcia, Eleonora, di Ilio, Chiara, Ananth, Cande V, Hill, Jennifer, Reddy, Ajay, Patrick, Haylea Sweat, Baba, Vuyelwa, and Adam, Mary
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Biodefense ,Pneumonia ,Lung ,Infant Mortality ,Vaccine Related ,Emerging Infectious Diseases ,Clinical Trials and Supportive Activities ,Clinical Research ,Pediatric ,Perinatal Period - Conditions Originating in Perinatal Period ,Preterm ,Low Birth Weight and Health of the Newborn ,Infectious Diseases ,Prevention ,Pneumonia & Influenza ,Infection ,Reproductive health and childbirth ,Good Health and Well Being ,Infant ,Newborn ,Pregnancy ,Female ,Humans ,Pregnant Women ,Prospective Studies ,COVID-19 ,SARS-CoV-2 ,Maternal health ,Epidemiology ,Perinatal COVID PMA Study Collaborators - Abstract
IntroductionDespite a growing body of research on the risks of SARS-CoV-2 infection during pregnancy, there is continued controversy given heterogeneity in the quality and design of published studies.MethodsWe screened ongoing studies in our sequential, prospective meta-analysis. We pooled individual participant data to estimate the absolute and relative risk (RR) of adverse outcomes among pregnant women with SARS-CoV-2 infection, compared with confirmed negative pregnancies. We evaluated the risk of bias using a modified Newcastle-Ottawa Scale.ResultsWe screened 137 studies and included 12 studies in 12 countries involving 13 136 pregnant women.Pregnant women with SARS-CoV-2 infection-as compared with uninfected pregnant women-were at significantly increased risk of maternal mortality (10 studies; n=1490; RR 7.68, 95% CI 1.70 to 34.61); admission to intensive care unit (8 studies; n=6660; RR 3.81, 95% CI 2.03 to 7.17); receiving mechanical ventilation (7 studies; n=4887; RR 15.23, 95% CI 4.32 to 53.71); receiving any critical care (7 studies; n=4735; RR 5.48, 95% CI 2.57 to 11.72); and being diagnosed with pneumonia (6 studies; n=4573; RR 23.46, 95% CI 3.03 to 181.39) and thromboembolic disease (8 studies; n=5146; RR 5.50, 95% CI 1.12 to 27.12).Neonates born to women with SARS-CoV-2 infection were more likely to be admitted to a neonatal care unit after birth (7 studies; n=7637; RR 1.86, 95% CI 1.12 to 3.08); be born preterm (7 studies; n=6233; RR 1.71, 95% CI 1.28 to 2.29) or moderately preterm (7 studies; n=6071; RR 2.92, 95% CI 1.88 to 4.54); and to be born low birth weight (12 studies; n=11 930; RR 1.19, 95% CI 1.02 to 1.40). Infection was not linked to stillbirth. Studies were generally at low or moderate risk of bias.ConclusionsThis analysis indicates that SARS-CoV-2 infection at any time during pregnancy increases the risk of maternal death, severe maternal morbidities and neonatal morbidity, but not stillbirth or intrauterine growth restriction. As more data become available, we will update these findings per the published protocol.
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- 2023
3. Protocol for a sequential, prospective meta-analysis to describe coronavirus disease 2019 (COVID-19) in the pregnancy and postpartum periods
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Smith, Emily R, Oakley, Erin, He, Siran, Zavala, Rebecca, Ferguson, Kacey, Miller, Lior, Grandner, Gargi Wable, Abejirinde, Ibukun-Oluwa Omolade, Afshar, Yalda, Ahmadzia, Homa, Aldrovandi, Grace, Akelo, Victor, Barr, Beth A Tippett, Bevilacqua, Elisa, Brandt, Justin S, Broutet, Natalie, Buhigas, Irene Fernández, Carrillo, Jorge, Clifton, Rebecca, Conry, Jeanne, Cosmi, Erich, Delgado-López, Camille, Divakar, Hema, Driscoll, Amanda J, Favre, Guillaume, Flaherman, Valerie, Gale, Christopher, Gil, Maria M, Godwin, Christine, Gottlieb, Sami, Bellolio, Olivia Hernandez, Kara, Edna, Khagayi, Sammy, Kim, Caron Rahn, Knight, Marian, Kotloff, Karen, Lanzone, Antonio, Le Doare, Kirsty, Lees, Christoph, Litman, Ethan, Lokken, Erica M, Longo, Valentina Laurita, Magee, Laura A, Martinez-Portilla, Raigam Jafet, McClure, Elizabeth, Metz, Torri D, Money, Deborah, Mullins, Edward, Nachega, Jean B, Panchaud, Alice, Playle, Rebecca, Poon, Liona C, Raiten, Daniel, Regan, Lesley, Rukundo, Gordon, Sanin-Blair, Jose, Temmerman, Marleen, Thorson, Anna, Thwin, Soe, Tolosa, Jorge E, Townson, Julia, Valencia-Prado, Miguel, Visentin, Silvia, von Dadelszen, Peter, Waldorf, Kristina Adams, Whitehead, Clare, Yang, Huixia, Thorlund, Kristian, and Tielsch, James M
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Reproductive Medicine ,Biomedical and Clinical Sciences ,Health Sciences ,Clinical Research ,Emerging Infectious Diseases ,Pediatric ,Prevention ,Reproductive health and childbirth ,Good Health and Well Being ,Adolescent ,COVID-19 ,Child ,Female ,Humans ,Infant ,Newborn ,Meta-Analysis as Topic ,Postpartum Period ,Pregnancy ,Prospective Studies ,Retrospective Studies ,SARS-CoV-2 ,General Science & Technology - Abstract
We urgently need answers to basic epidemiological questions regarding SARS-CoV-2 infection in pregnant and postpartum women and its effect on their newborns. While many national registries, health facilities, and research groups are collecting relevant data, we need a collaborative and methodologically rigorous approach to better combine these data and address knowledge gaps, especially those related to rare outcomes. We propose that using a sequential, prospective meta-analysis (PMA) is the best approach to generate data for policy- and practice-oriented guidelines. As the pandemic evolves, additional studies identified retrospectively by the steering committee or through living systematic reviews will be invited to participate in this PMA. Investigators can contribute to the PMA by either submitting individual patient data or running standardized code to generate aggregate data estimates. For the primary analysis, we will pool data using two-stage meta-analysis methods. The meta-analyses will be updated as additional data accrue in each contributing study and as additional studies meet study-specific time or data accrual thresholds for sharing. At the time of publication, investigators of 25 studies, including more than 76,000 pregnancies, in 41 countries had agreed to share data for this analysis. Among the included studies, 12 have a contemporaneous comparison group of pregnancies without COVID-19, and four studies include a comparison group of non-pregnant women of reproductive age with COVID-19. Protocols and updates will be maintained publicly. Results will be shared with key stakeholders, including the World Health Organization (WHO) Maternal, Newborn, Child, and Adolescent Health (MNCAH) Research Working Group. Data contributors will share results with local stakeholders. Scientific publications will be published in open-access journals on an ongoing basis.
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- 2022
4. Barriers to Refugee Adolescents' Educational Access during COVID-19: Exploring the Roles of Gender, Displacement, and Social Inequalities
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Jones, Nicola, Pincock, Kate, Guglielmi, Silvia, Baird, Sarah, Sánchez Tapia, Ingrid, Oakley, Erin, and Seager, Jennifer
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As of 2021, more than 80 million people worldwide have been displaced by war, violence, and poverty. An estimated 30 to 34 million of these are under age 18, and many are at risk of interrupting their education permanently--a situation aggravated in recent years by the global COVID-19 pandemic. In this article, we adopt an intersectional conceptual framework to explore the roles gender and other social inequalities have played in shaping adolescents' access to education during the COVID-19 pandemic. We examine two refugee populations: the Rohingya, who have been excluded from formal education opportunities in Bangladesh, and Syrian refugees in Jordan, who have access to formal education in their host country. We provide novel empirical data, as well as insights into the adolescent refugee experience and the short-term consequences for education resulting from the pandemic. In the article, we draw from quantitative survey data on 3,030 adolescents, and from in-depth qualitative interviews we conducted in the spring of 2020 with a subset of 91 adolescents who are part of an ongoing longitudinal study. We also conducted 40 key informant interviews with community leaders and service providers.
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- 2022
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5. Clinical risk factors of adverse outcomes among women with COVID-19 in the pregnancy and postpartum period: a sequential, prospective meta-analysis
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Smith, Emily R., Oakley, Erin, Grandner, Gargi Wable, Rukundo, Gordon, Farooq, Fouzia, Ferguson, Kacey, Baumann, Sasha, Adams Waldorf, Kristina Maria, Afshar, Yalda, Ahlberg, Mia, Ahmadzia, Homa, Akelo, Victor, Aldrovandi, Grace, Bevilacqua, Elisa, Bracero, Nabal, Brandt, Justin S., Broutet, Natalie, Carrillo, Jorge, Conry, Jeanne, Cosmi, Erich, Crispi, Fatima, Crovetto, Francesca, del Mar Gil, Maria, Delgado-López, Camille, Divakar, Hema, Driscoll, Amanda J., Favre, Guillaume, Fernandez Buhigas, Irene, Flaherman, Valerie, Gale, Christopher, Godwin, Christine L., Gottlieb, Sami, Gratacós, Eduard, He, Siran, Hernandez, Olivia, Jones, Stephanie, Joshi, Sheetal, Kalafat, Erkan, Khagayi, Sammy, Knight, Marian, Kotloff, Karen L., Lanzone, Antonio, Laurita Longo, Valentina, Le Doare, Kirsty, Lees, Christoph, Litman, Ethan, Lokken, Erica M., Madhi, Shabir A., Magee, Laura A., Martinez-Portilla, Raigam Jafet, Metz, Torri D., Miller, Emily S., Money, Deborah, Moungmaithong, Sakita, Mullins, Edward, Nachega, Jean B., Nunes, Marta C., Onyango, Dickens, Panchaud, Alice, Poon, Liona C., Raiten, Daniel, Regan, Lesley, Sahota, Daljit, Sakowicz, Allie, Sanin-Blair, Jose, Stephansson, Olof, Temmerman, Marleen, Thorson, Anna, Thwin, Soe Soe, Tippett Barr, Beth A., Tolosa, Jorge E., Tug, Niyazi, Valencia-Prado, Miguel, Visentin, Silvia, von Dadelszen, Peter, Whitehead, Clare, Wood, Mollie, Yang, Huixia, Zavala, Rebecca, and Tielsch, James M.
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- 2023
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6. COVID-19 and the gendered impacts on adolescent wellbeing: Evidence from a cross-sectional study of locally adapted measures in Ethiopia, Jordan, and Palestine
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Oakley, Erin, Abuhamad, Shoroq, Seager, Jennifer, Avuwadah, Benjamin, Hamory, Joan, Jones, Nicola, Małachowska, Agnieszka, Yadete, Workneh, Hamad, Bassam Abu, and Baird, Sarah
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- 2022
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7. The use of a book club to promote biomedical trainee professional development
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Ho, Jenni, Smith, Stacy, Oakley, Erin, and Vanderford, Nathan L.
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- 2022
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8. ‘No One Should Be Terrified Like I Was!’ Exploring Drivers and Impacts of Child Marriage in Protracted Crises Among Palestinian and Syrian Refugees
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Hamad, Bassam Abu, Elamassie, Samah, Oakley, Erin, Alheiwidi, Sarah, and Baird, Sarah
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- 2021
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9. Accelerating Well-being for Adolescents Through Transformative Public Policy: A Framework for Action.
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Baird, Sarah, Das, Saini, Luckenbill, Sara, Oakley, Erin, and Banati, Prerna
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As governments around the world are shaping policy responses to advance adolescent well-being and protect their rights, the tools and resources to strengthen policy foundations, and ultimately improve their effectiveness, remain limited. This paper proposes a framework to support policy action with an explicit adolescent focus and applies it to two illustrative case studies to unpack the underlying policy conditions for success. We develop an analytic framework with an adolescent lens that focuses on the full policy life-course, from development, to implementation, to evaluation. We then choose two illustrative case studies to apply this framework — 1) abolition of secondary school fees policy in Kenya and 2) age of marriage law in Mexico. These cases were chosen based on the existence of rigorous causal evidence of effect, alignment of salience with expert opinions, broad-based implications for adolescents across contexts, and varied levels of success at achieving intended outcomes. Our framework identified six key components as critical foundations for adolescent-focused policies: (1) policy features and costs, (2) implementation considerations, (3) participatory approach, (4) inclusion and coverage, (5) policy appropriateness, and (6) monitoring and evaluation, each with key adolescent-specific elements. We find that the majority of the essential policy elements are addressed in the school fees abolition policy (Kenya), but are sparser in the age of marriage law (Mexico). The results also highlight the lack of decentralized monitoring as well as meaningful adolescent engagement at any level of policy development as potential drivers of ineffectiveness of adolescent-centric policies. Our adolescent policy analysis framework can serve as an important tool to define principles in the development of effective adolescent policies. It also can serve as a useful evaluation tool to unpack the 'black box' of policy effectiveness when combined with robustly estimated effects. [ABSTRACT FROM AUTHOR]
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- 2024
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10. Virtual typing by people with tetraplegia using a self-calibrating intracortical brain-computer interface
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Jarosiewicz, Beata, Sarma, Anish A, Bacher, Daniel, Masse, Nicolas Y, Simeral, John D, Sorice, Brittany, Oakley, Erin M, Blabe, Christine, Pandarinath, Chethan, Gilja, Vikash, Cash, Sydney S, Eskandar, Emad N, Friehs, Gerhard, Henderson, Jaimie M, Shenoy, Krishna V, Donoghue, John P, and Hochberg, Leigh R
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Engineering ,Biomedical Engineering ,Neurosciences ,Assistive Technology ,Bioengineering ,Clinical Research ,Neurological ,Amyotrophic Lateral Sclerosis ,Brain-Computer Interfaces ,Calibration ,Female ,Humans ,Male ,Motor Cortex ,Quadriplegia ,Self-Help Devices ,Stroke ,Biological Sciences ,Medical and Health Sciences ,Medical biotechnology ,Biomedical engineering - Abstract
Brain-computer interfaces (BCIs) promise to restore independence for people with severe motor disabilities by translating decoded neural activity directly into the control of a computer. However, recorded neural signals are not stationary (that is, can change over time), degrading the quality of decoding. Requiring users to pause what they are doing whenever signals change to perform decoder recalibration routines is time-consuming and impractical for everyday use of BCIs. We demonstrate that signal nonstationarity in an intracortical BCI can be mitigated automatically in software, enabling long periods (hours to days) of self-paced point-and-click typing by people with tetraplegia, without degradation in neural control. Three key innovations were included in our approach: tracking the statistics of the neural activity during self-timed pauses in neural control, velocity bias correction during neural control, and periodically recalibrating the decoder using data acquired during typing by mapping neural activity to movement intentions that are inferred retrospectively based on the user's self-selected targets. These methods, which can be extended to a variety of neurally controlled applications, advance the potential for intracortical BCIs to help restore independent communication and assistive device control for people with paralysis.
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- 2015
11. Neural Point-and-Click Communication by a Person With Incomplete Locked-In Syndrome.
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Bacher, Daniel, Jarosiewicz, Beata, Masse, Nicolas Y, Stavisky, Sergey D, Simeral, John D, Newell, Katherine, Oakley, Erin M, Cash, Sydney S, Friehs, Gerhard, and Hochberg, Leigh R
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Humans ,Quadriplegia ,Communication Aids for Disabled ,Communication ,User-Computer Interface ,Middle Aged ,Female ,Brain-Computer Interfaces ,ALS ,assistive technology ,paralysis ,spinal cord injury ,stroke ,text entry ,Rare Diseases ,Assistive Technology ,Neurosciences ,Neurodegenerative ,Bioengineering ,Clinical Research ,Mental health ,Neurological ,Clinical Sciences ,Cognitive Sciences ,Rehabilitation - Abstract
A goal of brain-computer interface research is to develop fast and reliable means of communication for individuals with paralysis and anarthria. We evaluated the ability of an individual with incomplete locked-in syndrome enrolled in the BrainGate Neural Interface System pilot clinical trial to communicate using neural point-and-click control. A general-purpose interface was developed to provide control of a computer cursor in tandem with one of two on-screen virtual keyboards. The novel BrainGate Radial Keyboard was compared to a standard QWERTY keyboard in a balanced copy-spelling task. The Radial Keyboard yielded a significant improvement in typing accuracy and speed-enabling typing rates over 10 correct characters per minute. The participant used this interface to communicate face-to-face with research staff by using text-to-speech conversion, and remotely using an internet chat application. This study demonstrates the first use of an intracortical brain-computer interface for neural point-and-click communication by an individual with incomplete locked-in syndrome.
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- 2015
12. Reprint of "Non-causal spike filtering improves decoding of movement intention for intracortical BCIs".
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Masse, Nicolas Y, Jarosiewicz, Beata, Simeral, John D, Bacher, Daniel, Stavisky, Sergey D, Cash, Sydney S, Oakley, Erin M, Berhanu, Etsub, Eskandar, Emad, Friehs, Gerhard, Hochberg, Leigh R, and Donoghue, John P
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Brain–computer interface ,Microelectrode array ,Neural decoding ,Non-causal filter ,Spike sorting ,Threshold crossing ,Neurosciences ,Bioengineering ,Assistive Technology ,Brain-computer interface ,Psychology ,Cognitive Sciences ,Neurology & Neurosurgery - Abstract
BACKGROUND:Multiple types of neural signals are available for controlling assistive devices through brain-computer interfaces (BCIs). Intracortically recorded spiking neural signals are attractive for BCIs because they can in principle provide greater fidelity of encoded information compared to electrocorticographic (ECoG) signals and electroencephalograms (EEGs). Recent reports show that the information content of these spiking neural signals can be reliably extracted simply by causally band-pass filtering the recorded extracellular voltage signals and then applying a spike detection threshold, without relying on "sorting" action potentials. NEW METHOD:We show that replacing the causal filter with an equivalent non-causal filter increases the information content extracted from the extracellular spiking signal and improves decoding of intended movement direction. This method can be used for real-time BCI applications by using a 4ms lag between recording and filtering neural signals. RESULTS:Across 18 sessions from two people with tetraplegia enrolled in the BrainGate2 pilot clinical trial, we found that threshold crossing events extracted using this non-causal filtering method were significantly more informative of each participant's intended cursor kinematics compared to threshold crossing events derived from causally filtered signals. This new method decreased the mean angular error between the intended and decoded cursor direction by 9.7° for participant S3, who was implanted 5.4 years prior to this study, and by 3.5° for participant T2, who was implanted 3 months prior to this study. CONCLUSIONS:Non-causally filtering neural signals prior to extracting threshold crossing events may be a simple yet effective way to condition intracortically recorded neural activity for direct control of external devices through BCIs.
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- 2015
13. Non-causal spike filtering improves decoding of movement intention for intracortical BCIs.
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Masse, Nicolas Y, Jarosiewicz, Beata, Simeral, John D, Bacher, Daniel, Stavisky, Sergey D, Cash, Sydney S, Oakley, Erin M, Berhanu, Etsub, Eskandar, Emad, Friehs, Gerhard, Hochberg, Leigh R, and Donoghue, John P
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Brain ,Humans ,Quadriplegia ,Pilot Projects ,Electrodes ,Implanted ,Motor Activity ,Neuropsychological Tests ,Action Potentials ,Signal Processing ,Computer-Assisted ,Aged ,Middle Aged ,Female ,Male ,Brain-Computer Interfaces ,Biomechanical Phenomena ,Brain–computer interface ,Microelectrode array ,Neural decoding ,Non-causal filter ,Spike sorting ,Threshold crossing ,Assistive Technology ,Neurosciences ,Bioengineering ,Brain-computer interface ,Psychology ,Cognitive Sciences ,Neurology & Neurosurgery - Abstract
BackgroundMultiple types of neural signals are available for controlling assistive devices through brain-computer interfaces (BCIs). Intracortically recorded spiking neural signals are attractive for BCIs because they can in principle provide greater fidelity of encoded information compared to electrocorticographic (ECoG) signals and electroencephalograms (EEGs). Recent reports show that the information content of these spiking neural signals can be reliably extracted simply by causally band-pass filtering the recorded extracellular voltage signals and then applying a spike detection threshold, without relying on "sorting" action potentials.New methodWe show that replacing the causal filter with an equivalent non-causal filter increases the information content extracted from the extracellular spiking signal and improves decoding of intended movement direction. This method can be used for real-time BCI applications by using a 4ms lag between recording and filtering neural signals.ResultsAcross 18 sessions from two people with tetraplegia enrolled in the BrainGate2 pilot clinical trial, we found that threshold crossing events extracted using this non-causal filtering method were significantly more informative of each participant's intended cursor kinematics compared to threshold crossing events derived from causally filtered signals. This new method decreased the mean angular error between the intended and decoded cursor direction by 9.7° for participant S3, who was implanted 5.4 years prior to this study, and by 3.5° for participant T2, who was implanted 3 months prior to this study.ConclusionsNon-causally filtering neural signals prior to extracting threshold crossing events may be a simple yet effective way to condition intracortically recorded neural activity for direct control of external devices through BCIs.
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- 2014
14. Geospatial Disparities in Federal COVID-19 Test-to-Treat Program
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Smith, Emily R., primary and Oakley, Erin M., additional
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- 2023
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15. Adverse maternal, fetal, and newborn outcomes among pregnant women with SARS-CoV-2 infection: an individual participant data meta-analysis
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Kalafat, Erkan (ORCID 0000-0003-0658-138X & YÖK ID 197389), Smith, Emily R.; Oakley, Erin; Grandner, Gargi Wable; Ferguson, Kacey; Farooq, Fouzia; Afshar, Yalda; Ahlberg, Mia; Ahmadzia, Homa; Akelo, Victor; Aldrovandi, Grace; Barr, Beth A. Tippett; Bevilacqua, Elisa; Brandt, Justin S.; Broutet, Nathalie; Buhigas, Irene Fernandez; Carrillo, Jorge; Clifton, Rebecca; Conry, Jeanne; Cosmi, Erich; Crispi, Fatima; Crovetto, Francesca; Delgado-Lopez, Camille; Divakar, Hema; Driscoll, Amanda J.; Favre, Guillaume; Flaherman, Valerie J.; Gale, Chris; Gil, Maria M.; Gottlieb, Sami L.; Gratacos, Eduard; Hernandez, Olivia; Jones, Stephanie; Khagayi, Sammy; Knight, Marian; Kotloff, Karen; Lanzone, Antonio; Le Doare, Kirsty; Lees, Christoph; Litman, Ethan; Lokken, Erica M.; Laurita Longo, Valentina; Madhi, Shabir A.; Magee, Laura A.; Martinez-Portilla, Raigam Jafet; McClure, Elizabeth M.; Metz, Tori D.; Miller, Emily S.; Money, Deborah; Moungmaithong, Sakita; Mullins, Edward; Nachega, Jean B.; Nunes, Marta C.; Onyango, Dickens; Panchaud, Alice; Poon, Liona C.; Raiten, Daniel; Regan, Lesley; Rukundo, Gordon; Sahota, Daljit; Sakowicz, Allie; Sanin-Blair, Jose; Soderling, Jonas; Stephansson, Olof; Temmerman, Marleen; Thorson, Anna; Tolosa, Jorge E.; Townson, Julia; Valencia-Prado, Miguel; Visentin, Silvia; von Dadelszen, Peter; Waldorf, Kristina Adams; Whitehead, Clare; Yassa, Murat; Tielsch, Jim M., School of Medicine, Kalafat, Erkan (ORCID 0000-0003-0658-138X & YÖK ID 197389), Smith, Emily R.; Oakley, Erin; Grandner, Gargi Wable; Ferguson, Kacey; Farooq, Fouzia; Afshar, Yalda; Ahlberg, Mia; Ahmadzia, Homa; Akelo, Victor; Aldrovandi, Grace; Barr, Beth A. Tippett; Bevilacqua, Elisa; Brandt, Justin S.; Broutet, Nathalie; Buhigas, Irene Fernandez; Carrillo, Jorge; Clifton, Rebecca; Conry, Jeanne; Cosmi, Erich; Crispi, Fatima; Crovetto, Francesca; Delgado-Lopez, Camille; Divakar, Hema; Driscoll, Amanda J.; Favre, Guillaume; Flaherman, Valerie J.; Gale, Chris; Gil, Maria M.; Gottlieb, Sami L.; Gratacos, Eduard; Hernandez, Olivia; Jones, Stephanie; Khagayi, Sammy; Knight, Marian; Kotloff, Karen; Lanzone, Antonio; Le Doare, Kirsty; Lees, Christoph; Litman, Ethan; Lokken, Erica M.; Laurita Longo, Valentina; Madhi, Shabir A.; Magee, Laura A.; Martinez-Portilla, Raigam Jafet; McClure, Elizabeth M.; Metz, Tori D.; Miller, Emily S.; Money, Deborah; Moungmaithong, Sakita; Mullins, Edward; Nachega, Jean B.; Nunes, Marta C.; Onyango, Dickens; Panchaud, Alice; Poon, Liona C.; Raiten, Daniel; Regan, Lesley; Rukundo, Gordon; Sahota, Daljit; Sakowicz, Allie; Sanin-Blair, Jose; Soderling, Jonas; Stephansson, Olof; Temmerman, Marleen; Thorson, Anna; Tolosa, Jorge E.; Townson, Julia; Valencia-Prado, Miguel; Visentin, Silvia; von Dadelszen, Peter; Waldorf, Kristina Adams; Whitehead, Clare; Yassa, Murat; Tielsch, Jim M., and School of Medicine
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Introduction: despite a growing body of research on the risks of SARS-CoV-2 infection during pregnancy, there is continued controversy given heterogeneity in the quality and design of published studies. Methods: we screened ongoing studies in our sequential, prospective meta-analysis. We pooled individual participant data to estimate the absolute and relative risk (RR) of adverse outcomes among pregnant women with SARS-CoV-2 infection, compared with confirmed negative pregnancies. We evaluated the risk of bias using a modified Newcastle-Ottawa Scale. Results: we screened 137 studies and included 12 studies in 12 countries involving 13 136 pregnant women. Pregnant women with SARS-CoV-2 infection-as compared with uninfected pregnant women-were at significantly increased risk of maternal mortality (10 studies; n=1490; RR 7.68, 95% CI 1.70 to 34.61); admission to intensive care unit (8 studies; n=6660; RR 3.81, 95% CI 2.03 to 7.17); receiving mechanical ventilation (7 studies; n=4887; RR 15.23, 95% CI 4.32 to 53.71); receiving any critical care (7 studies; n=4735; RR 5.48, 95% CI 2.57 to 11.72); and being diagnosed with pneumonia (6 studies; n=4573; RR 23.46, 95% CI 3.03 to 181.39) and thromboembolic disease (8 studies; n=5146; RR 5.50, 95% CI 1.12 to 27.12). Neonates born to women with SARS-CoV-2 infection were more likely to be admitted to a neonatal care unit after birth (7 studies; n=7637; RR 1.86, 95% CI 1.12 to 3.08); be born preterm (7 studies; n=6233; RR 1.71, 95% CI 1.28 to 2.29) or moderately preterm (7 studies; n=6071; RR 2.92, 95% CI 1.88 to 4.54); and to be born low birth weight (12 studies; n=11 930; RR 1.19, 95% CI 1.02 to 1.40). Infection was not linked to stillbirth. Studies were generally at low or moderate risk of bias. Conclusions: this analysis indicates that SARS-CoV-2 infection at any time during pregnancy increases the risk of maternal death, severe maternal morbidities and neonatal morbidity, but not stillbirth or intrauterine growth restriction, Funded by the Bill & Melinda Gates Foundation grant to ERS (INV- 022057).
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- 2023
16. Creating a better post-pandemic future for adolescents with disabilities
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Baird, Sarah, primary, Abu Hamad, Bassam, additional, Baniodeh, Kifah, additional, Carew, Mark, additional, Goel, Nimisha, additional, Ismail, Anas, additional, Oakley, Erin, additional, Seager, Jennifer, additional, Woldehanna, Tassew, additional, and Jones, Nicola, additional
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- 2023
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17. Reprint of “Non-causal spike filtering improves decoding of movement intention for intracortical BCIs”
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Masse, Nicolas Y., Jarosiewicz, Beata, Simeral, John D., Bacher, Daniel, Stavisky, Sergey D., Cash, Sydney S., Oakley, Erin M., Berhanu, Etsub, Eskandar, Emad, Friehs, Gerhard, Hochberg, Leigh R., and Donoghue, John P.
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- 2015
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18. Abstract B008: Evaluation of the NCI’s Geographic Management of Cancer Health Disparities (GMaP) program
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Fleisher, Linda, primary, Norbeck, Carrie, additional, Kano, Miria, additional, Herrera, Amy, additional, Kay, Emily, additional, Oakley, Erin, additional, Sims, Z'kera, additional, Kenny, Cassidy, additional, and Landau, Zoe, additional
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- 2023
- Full Text
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19. Non-causal spike filtering improves decoding of movement intention for intracortical BCIs
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Masse, Nicolas Y., Jarosiewicz, Beata, Simeral, John D., Bacher, Daniel, Stavisky, Sergey D., Cash, Sydney S., Oakley, Erin M., Berhanu, Etsub, Eskandar, Emad, Friehs, Gerhard, Hochberg, Leigh R., and Donoghue, John P.
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- 2014
- Full Text
- View/download PDF
20. Mechanisms of Stem Cell Ageing
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Waterstrat, Amanda, Oakley, Erin, Miller, Alison, Swiderski, Carol, Liang, Ying, Van Zant, Gary, and Rudolph, K. Lenhard, editor
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- 2008
- Full Text
- View/download PDF
21. Stem Cell Aging: Potential Effects on Health and Mortality
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Oakley, Erin, Miller, Alison, Waterstrat, Amanda, Swiderski, Carol, Liang, Ying, Van Zant, Gary, Balducci, Lodovico, editor, Ershler, William B., editor, and Bennett, John M., editor
- Published
- 2007
- Full Text
- View/download PDF
22. Adolescent Social Outcomes Declined During COVID-19: Evidence From Bangladesh, Jordan, And Ethiopia
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Seager, Jennifer, Oakley, Erin, Akhtar, Ahwaz, Das, Saini, Hamory, Joan, and Baird, Sarah
- Abstract
Although adolescents have been less susceptible to COVID-19-related morbidity and mortality than older people, the social containment policies put in place to curb the disease constrained their ability to thrive. This study explored changes in adolescent outcomes during the COVID-19 pandemic, particularly among vulnerable adolescents, focusing on education, economic participation, early marriage, self-reported health, and food security. We investigated the role of governmental and nongovernmental cash and food aid in mitigating negative effects. Using panel data collected both before (2017–20) and at two points during (2020–21) the pandemic on more than 7,000 adolescents from Bangladesh, Jordan, and Ethiopia, we found evidence of worsening outcomes across all measures except self-reported health. Declines were generally worse for more vulnerable adolescents. There is little evidence that aid mitigated negative impacts for adolescents in general or for vulnerable adolescents in particular. This research highlights the need for greater focus on developing social protection that is responsive to the multifaceted needs of adolescents.
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- 2023
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23. Geospatial disparities in federal COVID-19 test-to-treat program
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Smith, Emily R., primary and Oakley, Erin M., additional
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- 2022
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24. Clinical risk factors of adverse outcomes among women with COVID-19 in the pregnancy and postpartum period: a sequential, prospective meta-analysis
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Kalafat, Erkan (ORCID 0000-0003-0658-138X & YÖK ID 197389), Smith , Emily R; Oakley, Erin; Grandner , Gargi Wable; Rukundo, Gordon; Farooq, Fouzia; Ferguson, Kacey; Bauman, Sasha; Waldorf, Kristina Maria Adams; Afshar, Yalda; Ahlberg, Mia; Ahmadzia, Homa; Akelo , Victor; Aldrovandi , Grace; Bevilacqua, Elisa; Bracero, Nabal; Brandt, Justin S; Broutet, Natalie; Carrillo, Jorge; Conry, Jeanne; Cosmi, Erich; Crispi, Fatima; Crovetto, Francesca; Gil, Maria Del Mar; Delgado-López, Camille; Divakar, Hema; Driscoll, Amanda J.; Favre, Guillaume;Buhigas, Irene Fernandez; Flaherman, Valerie; Gale, Christopher; Godwin,Christine L.; Gottlieb, Sami; Gratacós, Eduard; He, Siran; Hernandez, Olivia; Jones, Stephanie; Joshi, Sheetal; Khagayi, Sammy; Knight, Marian; Kotloff, Karen; Lanzone, Antonio; Longo, Valentina Laurita; Doare, Kirsty Le; Lees, Christoph; Litman, Ethan; Lokken, Erica M; Madhi, Shabir A; Magee, Laura A; Martinez- Portilla ,Raigam Jafet; Metz,Torri D.; Miller, Emily S; Money, Deborah; Moungmaithong, Sakita; Mullins, Edward; Nachega, Jean B.; Nunes, Marta C.; Onyango, Dickens; Panchaud, Alice; Poon, Liona C.; Raiten, Daniel; Regan, Lesley; Sahota, Daljit; Sakowicz, Allie; Sanin-Blair, Jose; Olof Stephansson; Temmerman, Marleen; Thorson, Anna; Thwin, Soe ; Tippett Barr, Beth A.; Tolosa, Jorge E.; Tug, Niyazi; Valencia-Prado, Miguel; Visentin, Silvia; von Dadelszen, Peter; Whitehead, Clare; Wood, Mollie; Yang, Huixia; Zavala, Rebecca; Tielsch, James M., School of Medicine, Kalafat, Erkan (ORCID 0000-0003-0658-138X & YÖK ID 197389), Smith , Emily R; Oakley, Erin; Grandner , Gargi Wable; Rukundo, Gordon; Farooq, Fouzia; Ferguson, Kacey; Bauman, Sasha; Waldorf, Kristina Maria Adams; Afshar, Yalda; Ahlberg, Mia; Ahmadzia, Homa; Akelo , Victor; Aldrovandi , Grace; Bevilacqua, Elisa; Bracero, Nabal; Brandt, Justin S; Broutet, Natalie; Carrillo, Jorge; Conry, Jeanne; Cosmi, Erich; Crispi, Fatima; Crovetto, Francesca; Gil, Maria Del Mar; Delgado-López, Camille; Divakar, Hema; Driscoll, Amanda J.; Favre, Guillaume;Buhigas, Irene Fernandez; Flaherman, Valerie; Gale, Christopher; Godwin,Christine L.; Gottlieb, Sami; Gratacós, Eduard; He, Siran; Hernandez, Olivia; Jones, Stephanie; Joshi, Sheetal; Khagayi, Sammy; Knight, Marian; Kotloff, Karen; Lanzone, Antonio; Longo, Valentina Laurita; Doare, Kirsty Le; Lees, Christoph; Litman, Ethan; Lokken, Erica M; Madhi, Shabir A; Magee, Laura A; Martinez- Portilla ,Raigam Jafet; Metz,Torri D.; Miller, Emily S; Money, Deborah; Moungmaithong, Sakita; Mullins, Edward; Nachega, Jean B.; Nunes, Marta C.; Onyango, Dickens; Panchaud, Alice; Poon, Liona C.; Raiten, Daniel; Regan, Lesley; Sahota, Daljit; Sakowicz, Allie; Sanin-Blair, Jose; Olof Stephansson; Temmerman, Marleen; Thorson, Anna; Thwin, Soe ; Tippett Barr, Beth A.; Tolosa, Jorge E.; Tug, Niyazi; Valencia-Prado, Miguel; Visentin, Silvia; von Dadelszen, Peter; Whitehead, Clare; Wood, Mollie; Yang, Huixia; Zavala, Rebecca; Tielsch, James M., and School of Medicine
- Abstract
Objective: this sequential, prospective meta-analysis (sPMA) sought to identify risk factors among pregnant and postpartum women with COVID-19 for adverse outcomes related to disease severity, maternal morbidities, neonatal mortality and morbidity, adverse birth outcomes. Data sources: we prospectively invited study investigators to join the sPMA via professional research networks beginning in March 2020. Study eligibility criteria: eligible studies included those recruiting at least 25 consecutive cases of COVID-19 in pregnancy within a defined catchment area. Study appraisal and synthesis methods: we included individual patient data from 21 participating studies. Data quality was assessed, and harmonized variables for risk factors and outcomes were constructed. Duplicate cases were removed. Pooled estimates for the absolute and relative risk of adverse outcomes comparing those with and without each risk factor were generated using a two-stage meta-analysis. Results: we collected data from 33 countries and territories, including 21,977 cases of SARS-CoV-2 infection in pregnancy or postpartum. We found that women with comorbidities (pre-existing diabetes, hypertension, cardiovascular disease) versus those without were at higher risk for COVID-19 severity and pregnancy health outcomes (fetal death, preterm birth, low birthweight). Participants with COVID-19 and HIV were 1.74 times (95% CI: 1.12, 2.71) more likely to be admitted to the ICU. Pregnant women who were underweight before pregnancy were at higher risk of ICU admission (RR 5.53, 95% CI: 2.27, 13.44), ventilation (RR 9.36, 95% CI: 3.87, 22.63), and pregnancy-related death (RR 14.10, 95% CI: 2.83, 70.36). Pre-pregnancy obesity was also a risk factor for severe COVID-19 outcomes including ICU admission (RR 1.81, 95% CI: 1.26,2.60), ventilation (RR 2.05, 95% CI: 1.20,3.51), any critical care (RR 1.89, 95% CI: 1.28,2.77), and pneumonia (RR 1.66, 95% CI: 1.18,2.33). Anemic pregnant women with COVID-19 also had inc, C.W. declares a relationship with the following entities: Ferring Pharmaceuticals (COVID19 Investigational Grant) and National Health and Medical Research Council Fellowship (salary support). A.P. declares the following research grants: ”1) H2020-Grant - Consortium member of Innovative medicine initiative call 13 topic 9, ConcePTION; and 2) Efficacy and safety studies on Medicines EMA/2017/09/PE/11, Lot 4, WP 2 lead, Safety monitoring of COVID-19 vaccines in the EU - Reopening of competition no. 20 under a framework contract following procurement procedure EMA/2017/09/PE (Lot 3) (Euro 110’000.-), Federal Office of Public Health (207’000 CHF).” E.M. and C.L. declare a relationship with the National Institute for Health and Care Research (project grant for PAN-COVID study). D.M. declares a relationship with the following entities: Canadian Institutes of Health Research (payments to institution only), Public Health Agency of Canada (payments to institution only), and BC Women’s Health Foundation (payments to institution only). She is also a member of the COVID-19 Immunity Task Force sponsored by the Canadian government. T.D.M. declares a relationship with the following entities: Pfizer (site Principal Investigator for SARS-CoV-2 vaccination in pregnancy study—payment received by the institution; member of Medical Advisory Board for SARS-CoV-2 vaccination in pregnancy studyepayment received by the author), Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) (subcommittee Chair for the NICHD Maternal-Fetal Medicine Units Network Gestational Research Assessments of COVID- 19 [GRAVID] study), and Society for Maternal-Fetal Medicine (board member). E.M.L. declares a relationship with the National Institutes of Health (paid institution) and is an employee of AbbVie, Inc, but was employed at the University of Washington at the time of the study. K.L.K. and S.H. declare a relationship with the Bill & Melinda Gates Foundation (BMGF) (S.H.: pa
- Published
- 2022
25. Tackling Male Underachievement: Enhancing a Strengths-Based Learning Environment for Middle School Boys
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Clark, Mary Ann, Flower, Kelly, Walton, Jonathan, and Oakley, Erin
- Published
- 2008
26. Compounding inequalities: Adolescent psychosocial wellbeing and resilience among refugee and host communities in Jordan during the COVID-19 pandemic
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Jones, Nicola, primary, Baird, Sarah, additional, Abu Hamad, Bassam, additional, Bhutta, Zulfiqar A., additional, Oakley, Erin, additional, Shah, Manisha, additional, Sajdi, Jude, additional, and Yount, Kathryn M., additional
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- 2022
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- View/download PDF
27. Exploring the gendered mental health experiences of adolescents in Gaza during the Covid-19 pandemic
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Abu Hamad, Bassam A., primary, Jones, Nicola A., additional, Baird, Sarah J., additional, Abuhamad, Shoroq H., additional, Diab, Riyad A., additional, Oakley, Erin M., additional, and Małachowska, Agnieszka M., additional
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- 2022
- Full Text
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28. Intersecting barriers to adolescents’ educational access during COVID-19: Exploring the role of gender, disability and poverty
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Jones, Nicola, primary, Sanchez Tapia, Ingrid, additional, Baird, Sarah, additional, Guglielmi, Silvia, additional, Oakley, Erin, additional, Yadete, Workneh Abebe, additional, Sultan, Maheen, additional, and Pincock, Kate, additional
- Published
- 2021
- Full Text
- View/download PDF
29. The Efficacy of a Book Club to Promote Biomedical Trainee Professional Development
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Ho, Jenni, primary, Smith, Stacy, additional, Oakley, Erin, additional, and Vanderford, Nathan, additional
- Published
- 2021
- Full Text
- View/download PDF
30. Stem Cell Aging: Potential Effects on Health and Mortality
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Oakley, Erin, primary, Miller, Alison, additional, Waterstrat, Amanda, additional, Swiderski, Carol, additional, Liang, Ying, additional, and Van Zant, Gary, additional
- Published
- 2008
- Full Text
- View/download PDF
31. Social Isolation and Disrupted Privacy
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Baird, Sarah, primary, Alheiwidi, Sarah, additional, Dutton, Rebecca, additional, Mitu, Khadija, additional, Oakley, Erin, additional, Woldehanna, Tassew, additional, and Jones, Nicola, additional
- Published
- 2020
- Full Text
- View/download PDF
32. Protocol for a sequential, prospective meta-analysis to describe coronavirus disease 2019 (COVID-19) in the pregnancy and postpartum periods
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Smith, Emily R., primary, Oakley, Erin, additional, He, Siran, additional, Zavala, Rebecca, additional, Ferguson, Kacey, additional, Miller, Lior, additional, Grandner, Gargi Wable, additional, Abejirinde, Ibukun-Oluwa Omolade, additional, Afshar, Yalda, additional, Ahmadzia, Homa, additional, Aldrovandi, Grace, additional, Akelo, Victor, additional, Tippett Barr, Beth A., additional, Bevilacqua, Elisa, additional, Brandt, Justin S., additional, Broutet, Natalie, additional, Fernández-Buhigas, Irene, additional, Carrillo, Jorge, additional, Clifton, Rebecca, additional, Conry, Jeanne, additional, Cosmi, Erich, additional, Delgado-López, Camille, additional, Divakar, Hema, additional, Driscoll, Amanda J., additional, Favre, Guillaume, additional, Flaherman, Valerie, additional, Gale, Christopher, additional, Gil, Maria M., additional, Godwin, Christine, additional, Gottlieb, Sami, additional, Bellolio, Olivia Hernandez, additional, Kara, Edna, additional, Khagayi, Sammy, additional, Kim, Caron Rahn, additional, Knight, Marian, additional, Kotloff, Karen, additional, Lanzone, Antonio, additional, Le Doare, Kirsty, additional, Lees, Christoph, additional, Litman, Ethan, additional, Lokken, Erica M., additional, Longo, Valentina Laurita, additional, Magee, Laura A., additional, Martinez-Portilla, Raigam Jafet, additional, McClure, Elizabeth, additional, Metz, Torri D., additional, Money, Deborah, additional, Mullins, Edward, additional, Nachega, Jean B., additional, Panchaud, Alice, additional, Playle, Rebecca, additional, Poon, Liona C., additional, Raiten, Daniel, additional, Regan, Lesley, additional, Rukundo, Gordon, additional, Sanin-Blair, Jose, additional, Temmerman, Marleen, additional, Thorson, Anna, additional, Thwin, Soe Soe, additional, Tolosa, Jorge E., additional, Townson, Julia, additional, Valencia-Prado, Miguel, additional, Visentin, Silvia, additional, von Dadelszen, Peter, additional, Waldorf, Kristina Adams, additional, Whitehead, Clare, additional, Yang, Huixia, additional, Thorlund, Kristian, additional, and Tielsch, James M., additional
- Published
- 2020
- Full Text
- View/download PDF
33. CG dinucleotide clustering is a species-specific property of the genome
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Glass, Jacob L., Thompson, Reid F., Khulan, Batbayar, Figueroa, Maria E., Olivier, Emmanuel N., Oakley, Erin J., Van Zant, Gary, Bouhassira, Eric E., Melnick, Ari, Golden, Aaron, Fazzari, Melissa J., and Greally, John M.
- Published
- 2007
34. Volitional control of single-electrode high gamma local field potentials by people with paralysis
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Milekovic, Tomislav, primary, Bacher, Daniel, additional, Sarma, Anish A., additional, Simeral, John D., additional, Saab, Jad, additional, Pandarinath, Chethan, additional, Yvert, Blaise, additional, Sorice, Brittany L., additional, Blabe, Christine, additional, Oakley, Erin M., additional, Tringale, Kathryn R., additional, Eskandar, Emad, additional, Cash, Sydney S., additional, Shenoy, Krishna V., additional, Henderson, Jaimie M., additional, Hochberg, Leigh R., additional, and Donoghue, John P., additional
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- 2019
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35. Age-Related Changes in Niche Cells Influence Hematopoietic Stem Cell Function
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Oakley, Erin J. and Van Zant, Gary
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- 2010
- Full Text
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36. Watch, Imagine, Attempt: Motor Cortex Single-Unit Activity Reveals Context-Dependent Movement Encoding in Humans With Tetraplegia
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Vargas-Irwin, Carlos E., primary, Feldman, Jessica M., additional, King, Brandon, additional, Simeral, John D., additional, Sorice, Brittany L., additional, Oakley, Erin M., additional, Cash, Sydney S., additional, Eskandar, Emad N., additional, Friehs, Gerhard M., additional, Hochberg, Leigh R., additional, and Donoghue, John P., additional
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- 2018
- Full Text
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37. Hematopoietic and neural crest defects in zebrafishshoc2mutants: a novel vertebrate model for Noonan-like syndrome
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Jang, HyeIn, primary, Oakley, Erin, additional, Forbes-Osborne, Marie, additional, Kesler, Melissa V, additional, Norcross, Rebecca, additional, Morris, Ann C, additional, and Galperin, Emilia, additional
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- 2018
- Full Text
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38. Stable long-term BCI-enabled communication in ALS and locked-in syndrome using LFP signals
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Milekovic, Tomislav, primary, Sarma, Anish A., additional, Bacher, Daniel, additional, Simeral, John D., additional, Saab, Jad, additional, Pandarinath, Chethan, additional, Sorice, Brittany L., additional, Blabe, Christine, additional, Oakley, Erin M., additional, Tringale, Kathryn R., additional, Eskandar, Emad, additional, Cash, Sydney S., additional, Henderson, Jaimie M., additional, Shenoy, Krishna V., additional, Donoghue, John P., additional, and Hochberg, Leigh R., additional
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- 2018
- Full Text
- View/download PDF
39. Hematopoietic and neural crest defects in zebrafish shoc2 mutants: a novel vertebrate model for Noonan-like syndrome.
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Jang, HyeIn, Oakley, Erin, Forbes-Osborne, Marie, Kesler, Melissa V, Norcross, Rebecca, Morris, Ann C, and Galperin, Emilia
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- 2019
- Full Text
- View/download PDF
40. Neural Point-and-Click Communication by a Person With Incomplete Locked-In Syndrome
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Bacher, Daniel, primary, Jarosiewicz, Beata, additional, Masse, Nicolas Y., additional, Stavisky, Sergey D., additional, Simeral, John D., additional, Newell, Katherine, additional, Oakley, Erin M., additional, Cash, Sydney S., additional, Friehs, Gerhard, additional, and Hochberg, Leigh R., additional
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- 2014
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41. Regulation of Stem Cell Aging by Retinoblastoma Like-1 (p107)
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Oakley, Erin J., primary, Geiger, Hartmut, primary, and Van Zant, Gary, primary
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- 2008
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42. Identification of a Novel Candidate Regulator of HSC Aging.
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Oakley, Erin J., primary and Van Zant, Gary, primary
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- 2006
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43. Identification of Candidate Regulators of Hematopoietic Stem Cell Aging Using a Combined QTL Mapping and Microarray Analysis Approach.
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Oakley, Erin J., primary and Van Zant, Gary, primary
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- 2005
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44. Mechanisms of Stem Cell Ageing.
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Rudolph, K. Lenhard, Waterstrat, Amanda, Oakley, Erin, Miller, Alison, Swiderski, Carol, Liang, Ying, and Van Zant, Gary
- Abstract
There are many definitions of the term "ageing" and perhaps even more theories that seek to explain its causes (Balcombe and Sinclair 2001). From a physiological standpoint, ageing beyond reproductive maturity is often viewed as a progression of multisystem deficits in tissue function. In adult mammals, tissue homeostasis is maintained by stem cell populations that reside in, or migrate between, a variety of adult tissues. These stem cells ensure proper tissue function by generating new cells to replace those lost or damaged over time. Despite the presence of adult stem cells in muscle, nervous, gastrointestinal, hematopoietic, and other tissues, each of these systems exhibit functional decline with age (Edwards et al. 2002, Campisi 2003, Kondo et al. 2003, Penninx et al. 2003, Pinto et al. 2003, Linton and Dorshkind 2004, Balducci and Ershler 2005, Fulle et al. 2005, Kamminga 2005, Bauer et al. 2006, Keller 2006, Theise 2006). It is compelling to consider that functional changes in the stem cell compartment of adult tissues precedes and perhaps contributes to the manifestation of ageing phenotypes. In this chapter we will review literature describing the effects of ageing on the well-characterized stem cells of the hematopoietic system. In this system, ageing is accompanied by immune compromise, anemia, and a dramatic increase in the incidence of malignancy (Edwards et al. 2002, Campisi 2003, Penninx et al. 2003, Pinto et al. 2003, Linton and Dorshkind 2004, Balducci and Ershler 2005). Several studies support the hypothesis that these ageing phenotypes stem from functional changes in hematopoietic stem cells (HSCs). [ABSTRACT FROM AUTHOR]
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- 2008
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45. Stem Cell Aging: Potential Effects on Health and Mortality.
- Author
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Balducci, Lodovico, Ershler, William B., Bennett, John M., Oakley, Erin, Miller, Alison, Waterstrat, Amanda, Swiderski, Carol, Liang, Ying, and Van Zant, Gary
- Abstract
Aging in a statistical sense is the increasing probability of death with increasing time of an organism's existence (1, 2). Can we extrapolate this to self-regenerating tissues and most particularly to the stem cells that drive the replenishment of lost and damaged cells throughout life? To be succinct, how close is the linkage between the vitality of the stem cell population and organismal longevity? These questions are currently without clear answers and the nature of the linkage, if any, is likely to be complicated, but is nonetheless conceptually compelling. However, in the most straightforward and blunt analysis, limiting numbers of hematopoietic stem cells, for example, resulting in aplastic anemia is an infrequent cause of death (3). Moreover, the hallmark property that distinguishes stem cells from most other somatic cells, their ability to self-replicate, in theory should provide a life-long supply. It was shown many years ago that hematopoietic stem cells could be transplanted into myeloablated recipients and continue to produce large numbers of differentiated blood cells over a time period that greatly exceeded the lifespan of the donor mouse (4). Serial transplants, in which an original bone marrow graft is passaged through a series of recipients, put even greater demands on stem cell proliferation and differentiation and thus demonstrate the tremendous regenerative potential of these cells. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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- View/download PDF
46. GENETIC REGULATION OF HEMATOPOIETIC STEM CELL AGING
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Oakley, Erin J.
- Subjects
- Hematopoietic Stem Cells, Aging, Genetic Regulation, QTL analysis, DNA damage, Medical Physiology, Medicine and Health Sciences
- Abstract
It is well documented that both quantitative and qualitative changes in the murine hematopoietic stem cell (HSC) population occur with age. In mice, the effect of aging on stem cells is highly strain-specific, thus suggesting genetic regulation plays a role in HSC aging. In C57BL/6 (B6) mice, the HSC population steadily increases with age, whereas in DBA/2 (D2) mice, this population declines. Our lab has previously mapped a quantitative trait locus (QTL) to murine chromosome 2 that is associated with the variation in frequency of HSCs between aged B6 and D2 mice. In these dissertation studies, I first aim to characterize the congenic mouse model which was generated by introgressing D2 alleles in the QTL onto a B6 background. Using a surrogate assay to mimic aging, I analyzed the cell cycle, apoptotic and self-renewal capabilities of congenic and B6 HSCs and show that D2 alleles in the QTL affect the apoptotic and selfrenewal capabilities of HSCs. In the second aim of these studies, I used oligonucleotide arrays to compare the differential expression of B6 and congenic cells using a population enriched for primitive stem and progenitor cells. Extensive analysis of the expression arrays pointed to two strong candidates, the genes encoding Retinoblastoma like protein 1 (p107) and Sorting nexin 5 (Snx5). B6 alleles were associated with increased p107 and Snx5 expression in old HSCs therefore both genes were hypothesized to be positive regulators of stem cell number in aged mice. Finally, in the third aim of these studies, I show that the individual overexpression of p107 and Snx5 in congeic HSCs increases day35 cobblestone area forming cell (CAFC) numbers, therefore confirming their roles as positive regulators of HSC number in vitro. These studies uncover novel roles for p107 and Snx5 in the regulation of HSC numbers and provide additional clues in the complex regulation of HSC aging.
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- 2008
47. The use of a book club to promote biomedical trainee professional development.
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Ho J, Smith S, Oakley E, and Vanderford NL
- Abstract
Professional development for biomedical doctoral and postdoctoral trainees is vital, especially due to the increase in individuals pursuing non-faculty career paths. We created a professional development-focused discussion group between trainees and faculty/staff by utilizing a book club format in which monthly small group meetings occurred over an 8-month period. A pre- and post-survey consisting of Likert and free-response questions was completed by participants. Results demonstrated that after the book club, trainees: 1) were more knowledgeable about a variety of career paths; 2) had improved awareness of their interests in relation to their career; 3) were more knowledgeable of their transferrable skills; 4) were more comfortable engaging with their PI and completing/updating an Individual Development Plan; 5) were more likely to find mentors in addition to their PI to address career specific needs; and 6) were more likely to seek opportunities to conduct informational interviews or experiential learning. Additionally, we found that faculty/staff: 1) were more knowledgeable about careers outside of academia; 2) had greater consideration for their mentee's values and interests in relation to their career; 3) had a better understanding of their mentee's transferable skills; and 4) were more comfortable engaging with their mentee about their career path and addressing an Individual Development Plan. Overall, we found that the utilization of a book club consisting of trainees and faculty/staff as a professional development tool was beneficial for both groups of participants, and this format is feasible for use in biomedical education professional development., Competing Interests: The authors declare no conflict of interest., (© 2021 The Author(s).)
- Published
- 2021
- Full Text
- View/download PDF
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