1. Assessing antimicrobial misuse in small-scale chicken farms in Vietnam from an observational study
- Author
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Choisy, M, Van Cuong, N, Bao, T, Kiet, B, Hien, B, Thu, H, Chansiripornchai, N, Setyawan, E, Thwaites, G, Rushton, J, Carrique-Mas, J, Oxford University Clinical Research Unit [Hanoi] (OUCRU), Maladies infectieuses et vecteurs : écologie, génétique, évolution et contrôle (MIVEGEC), and Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])
- Subjects
Chicken farm ,[SDV.BA.MVSA]Life Sciences [q-bio]/Animal biology/Veterinary medicine and animal Health ,lcsh:Veterinary medicine ,Bayes model ,[SDV.SA.ZOO]Life Sciences [q-bio]/Agricultural sciences/Zootechny ,Bayes Theorem ,Drug Resistance, Microbial ,Low-and middle-income country ,naïve Bayes model ,Anti-Infective Agents ,Drug Misuse ,Vietnam ,Low- and middle-income country ,naive ,Animals ,lcsh:SF600-1100 ,[SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie ,Antimicrobial usage ,Chickens ,Poultry Diseases ,Research Article - Abstract
Background Antimicrobials are used by poultry farmers in Vietnam as a tool to treat and prevent infectious diseases. We aimed to determine the fraction of disease episodes likely to remain untreated due to the administration of antimicrobials on non-susceptible pathogens in chicken flocks in the Mekong Delta of Vietnam. Weekly data on antimicrobial use and clinical signs were collected from 88 randomly chosen chicken flocks over 124 full production cycles (i.e. time between restocking flocks with day-old chicks and sale for slaughter). A naïve Bayes model was trained to infer the probabilities of disease episodes having been caused by each of 24 pathogens, given the observed clinical sign profile, and expert knowledge on their relative incidence. Results A total of 224 disease episodes were observed, of which 44.8% were attributed to viruses (95% CI 31.1–58.4%), 54.6% (CI 40.4–68.7%) to bacteria, and 0.6% (CI 0–1.7%) to a protozoan (Eimeria spp.). Antimicrobials were more frequently administered on weeks with disease than on weeks without disease (43.3% vs. 17.8%; p
- Published
- 2019
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