189 results on '"PREDICTS"'
Search Results
2. LncRNA HOTTIP as a diagnostic biomarker for acute respiratory distress syndrome in patients with sepsis and to predict the short-term clinical outcome: a case-control study.
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Shi, Weitao, Zhu, Wang, Yu, Jiani, Shi, Yingjun, and Zhao, Yuliang
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RNA physiology , *BIOMARKERS , *CONFIDENCE intervals , *SAMPLE size (Statistics) , *CASE-control method , *ADULT respiratory distress syndrome , *SEPSIS , *TREATMENT effectiveness , *PEARSON correlation (Statistics) , *KAPLAN-Meier estimator , *DESCRIPTIVE statistics , *RECEIVER operating characteristic curves , *LOGISTIC regression analysis , *DISEASE risk factors - Abstract
Background: The present research aims to investigate the clinical diagnostic value of LncRNA HOXA distal transcript antisense RNA (HOTTIP) in acute respiratory distress syndrome (ARDS) of sepsis and its predictive significance for mortality. Methods: One hundred eighteenth patients with sepsis and 96 healthy individuals were enrolled. RT-qPCR to examine HOTTIP levels. The incidence of ARDS and death was recorded. The diagnostic significance of HOTTIP in sepsis ARDS was examined using ROC and logistic regression analysis. The correlation between HOTTIP and disease severity was evaluated using Pearson's coefficients. Kaplan-Meier analysis and COX regression were employed to examine the predictive significance of mortality. Validation of HOTTIP target miRNA by dual-luciferase assay. Results: HOTTIP was persistently up-regulated in patients with ARDS sepsis than in patients without ARDS patients (P < 0.05). HOTTIP was a risk factor for the development of ARDS, which could be diagnosed in ARDS patients from non-ARDS patients (AUC = 0.847). Both the SOFA score (r = 0.6793) and the APACHE II score (r = 0.6384) were positively correlated with the HOTTIP levels. Furthermore, serum HOTTIP was an independent predictor of short-term mortality (HR = 4.813. 95%CI: 1.471–15.750, P = 0.009) and noticeably predicted the occurrence of short-term death (log rank = 0.020). miR-574-5p, a target miRNA for HOTTIP, was reduced in patients with sepsis ARDS and negatively correlated with HOTTIP. Conclusions: The presence of HOTTIP serves as a diagnostic biomarker for the occurrence of ARDS, exhibits correlation with disease severity, and provides predictive value of short-term mortality in sepsis patients. HOTTIP may be involved in ARDS progression by targeting miR-574-5p. [ABSTRACT FROM AUTHOR]
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- 2024
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3. Circulating mir-483-5p as a novel diagnostic biomarker for acute coronary syndrome and its predictive value for the clinical outcome after PCI
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Yuying Zhao, Xinxing Song, Yanzhuo Ma, Xiang Liu, and Yuhong Peng
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Acute coronary syndrome ,miR-483-5p ,Major adverse cardiovascular events ,Diagnostic ,Predicts ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Abstract Background MicroRNA (miRNA) plays a critical function in the progression of acute coronary syndrome (ACS) and is associated with major adverse cardiovascular events (MACEs) after undergoing percutaneous coronary intervention (PCI). This research was designed to probe the diagnostic accuracy of miR-483-5p in patients with ACS and its predictive value of MACEs. Methods 118 patients with ACS (40 with unstable angina pectoris [UAP] and 78 with acute myocardial infarction [AMI]) and 75 healthy controls were enrolled. Serum miR-483-5p was detected in the subjects by reverse transcription-quantitative real-time PCR (RT-qPCR). ROC curve and logistic regression models were employed to estimate the diagnosis. Patients were monitored for 6 months after PCI to document the occurrence of MACEs. Kaplan-Meier survival was conducted to explore the predictive significance of miR-483-5p for the MACEs. Results Serum miR-483-5p levels were higher in ACS patients and associated with SYNTAX score and Gensini score. miR-483-5p was effective in identifying ACS patients from healthy individuals (AUC = 0.919) and AMI patients from ACS patients (AUC = 0.867), demonstrating a high diagnostic value, proven by logistic regression (OR = 9.664, 95%CI = 4.462–20.928, P
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- 2023
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4. The undetectability of global biodiversity trends using local species richness.
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Valdez, Jose W., Callaghan, Corey T., Junker, Jessica, Purvis, Andy, Hill, Samantha L. L., and Pereira, Henrique M.
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SPECIES diversity , *MEASUREMENT errors , *STATISTICAL power analysis , *BIODIVERSITY , *STATISTICAL errors , *GRAIN yields - Abstract
Although species are being lost at alarming rates, previous research has provided conflicting results on the extent and even direction of global biodiversity change at the local scale. Here, we assessed the ability to detect global biodiversity trends using local species richness and how it is affected by the number of monitoring sites, sampling interval (i.e. time between original survey and re‐survey of the site), measurement error (error of the measurement of the local species richness), spatial grain of monitoring (a proxy for the taxa mobility) and spatial sampling biases (i.e. site‐selection biases). We use PREDICTS model‐based estimates as a proxy for the real‐world distribution of biodiversity and randomly selected monitoring sites to calculate local species richness trends. We found that while a monitoring network with hundreds of sites could detect global change in species richness within a 30‐year period, the number of sites for detecting trends doubled for a decade, increased 10‐fold within three years and yearly trends were undetectable. Measurement errors had a non‐linear effect on statistical power, with a 1% error reducing statistical power by a slight margin and a 5% error drastically reducing the power to reliably detect any trend. The ability to detect global change in local species richness was also related to spatial grain, making it harder to detect trends for sites sampled at smaller plot sizes. Spatial sampling biases not only reduced the ability to detect negative global biodiversity trends but sometimes yielded positive trends. We conclude that detecting accurate global biodiversity trends using local richness may simply be unfeasible with current approaches. We suggest that monitoring a representative network of sites implemented at the national level, combined with models accounting for errors and biases, can help improve our understanding of global biodiversity change. [ABSTRACT FROM AUTHOR]
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- 2023
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5. Cerebrospinal fluid exosomal miR-152-3p predicts the occurrence of subarachnoid haemorrhage and regulates vascular smooth muscle cell dysfunction
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Yunping Li, An Wu, Weimin Dai, Rongcai Liu, Bingjie Jiang, and Richeng Zhou
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intracranial aneurysm ,mir-152-3p ,cerebrospinal fluid ,exosome ,predicts ,Medicine - Published
- 2022
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6. Important Crop Pollinators Respond Less Negatively to Anthropogenic Land Use Than Other Animals.
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Williams JJ, Newbold T, Millard J, Groner VP, and Pearson RG
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Animal-mediated pollination is a key ecosystem service required to some extent by almost three-quarters of the leading human food crops in global food production. Anthropogenic pressures such as habitat loss and land-use intensification are causing shifts in ecological community composition, potentially resulting in declines in pollination services and impacting crop production. Previous research has often overlooked interspecific differences in pollination contribution, yet such differences mean that biodiversity declines will not necessarily negatively impact pollination. Here, we use a novel species-level ecosystem service contribution matrix along with mixed-effects models to explore how groups of terrestrial species who contribute differently to crop pollination respond globally to land-use type, land-use intensity, and availability of natural habitats in the surrounding landscape. We find that the species whose contribution to crop pollination is higher generally respond less negatively (and in some cases positively) to human disturbance of land, compared to species that contribute less or not at all to pollination. This result may be due to these high-contribution species being less sensitive to anthropogenic land conversions, which has led humans to being more reliant on them for crop pollination. However, it also suggests that there is potential for crop pollination to be resilient in the face of anthropogenic land conversions. With such a high proportion of food crops requiring animal-mediated pollination to some extent, understanding how anthropogenic landscapes impact ecological communities and the consequences for pollination is critical for ensuring food security., Competing Interests: The authors declare no conflicts of interest., (© 2024 The Author(s). Ecology and Evolution published by John Wiley & Sons Ltd.)
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- 2024
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7. Circulating mir-483-5p as a novel diagnostic biomarker for acute coronary syndrome and its predictive value for the clinical outcome after PCI
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Zhao, Yuying, Song, Xinxing, Ma, Yanzhuo, Liu, Xiang, and Peng, Yuhong
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- 2023
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8. Predictability and transferability of local biodiversity environment relationships.
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Martin Jung
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SPECIES diversity ,REMOTE sensing ,SAMPLING (Process) ,BIODIVERSITY - Abstract
Background: Biodiversity varies in space and time, and often in response to environmental heterogeneity. Indicators in the form of local biodiversity measures-such as species richness or abundance-are common tools to capture this variation. The rise of readily available remote sensing data has enabled the characterization of environmental heterogeneity in a globally robust and replicable manner. Based on the assumption that differences in biodiversity measures are generally related to differences in environmental heterogeneity, these data have enabled projections and extrapolations of biodiversity in space and time. However so far little work has been done on quantitatively evaluating if and how accurately local biodiversity measures can be predicted. Methods: Here I combine estimates of biodiversity measures from terrestrial local biodiversity surveys with remotely-sensed data on environmental heterogeneity globally. I then determine through a cross-validation framework how accurately local biodiversity measures can be predicted within ("predictability") and across similar ("transferability") biodiversity surveys. Results: I found that prediction errors can be substantial, with error magnitudes varying between different biodiversity measures, taxonomic groups, sampling techniques and types of environmental heterogeneity characterizations. And although errors associated with model predictability were in many cases relatively low, these results question-particular for transferability-our capability to accurately predict and project local biodiversity measures based on environmental heterogeneity. I make the case that future predictions should be evaluated based on their accuracy and inherent uncertainty, and ecological theories be tested against whether we are able to make accurate predictions from local biodiversity data. [ABSTRACT FROM AUTHOR]
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- 2022
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9. Circulating miR-342-5p serves as a diagnostic biomarker in patients with carotid artery stenosis and predicts the occurrence of the cerebral ischemic event.
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Zhou, Aihua, Li, Ying, Wang, Ping, Yu, Ping, and Lang, Liying
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Background: Carotid artery stenosis (CAS) is an important risk factor for cerebral ischemia events (CIE). Previous studies have shown that microRNAs (miRNAs) are involved in the occurrence and development of CAS. Aims: The purpose of this study was to reveal the clinical diagnostic value of miR-342-5p for asymptomatic CAS (ACAS) and to evaluate its predictive value for the occurrence of CIE in patients. Methods: A total of 92 ACAS patients and 86 healthy controls were enrolled as subjects. The expression level of serum miR-342-5p was detected by qRT-PCR. The receiver operating characteristic (ROC) curve was used to detect the diagnostic value of miR-342-5p in ACAS. Kaplan–Meier survival and Cox regression analysis assessed the predictive value of miR-342-5p for the occurrence of CIE in ACAS patients. Results: The level of serum miR-342-5p in ACAS patients was significantly higher than that in healthy controls (P < 0.05). ROC curve showed the high diagnostic value of serum miR-342-5p, which could distinguish ACAS patients from healthy controls. Multivariate Cox regression analysis confirmed that miR-342-5p was an independent predictor (HR = 5.512, 95%CI = 1.370–22.176, P = 0.016). What is more, Kaplan–Meier analysis confirmed that patients with high miR-342-5p expression develop more CIE (log-rank, P = 0.020). Conclusions: miR-342-5p was significantly overexpressed in ACAS. And the upregulation of serum miR-342-5p is a valuable diagnostic biomarker and can predict the occurrence of CIE. [ABSTRACT FROM AUTHOR]
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- 2022
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10. Social Vulnerability and Compliance With World Health Organization Advice on Protective Behaviors Against COVID-19 in African and Asia Pacific Countries: Factor Analysis to Develop a Social Vulnerability Index.
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Pongutta S, Tangcharoensathien V, Leung K, Larson HJ, and Lin L
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- Humans, Asia epidemiology, Africa epidemiology, Factor Analysis, Statistical, Female, Vulnerable Populations, Male, Adult, Middle Aged, Guideline Adherence statistics & numerical data, Health Behavior, COVID-19 prevention & control, COVID-19 epidemiology, World Health Organization
- Abstract
Background: COVID-19 protective behaviors are key interventions advised by the World Health Organization (WHO) to prevent COVID-19 transmission. However, achieving compliance with this advice is often challenging, particularly among socially vulnerable groups., Objective: We developed a social vulnerability index (SVI) to predict individuals' propensity to adhere to the WHO advice on protective behaviors against COVID-19 and identify changes in social vulnerability as Omicron evolved in African countries between January 2022 and August 2022 and Asia Pacific countries between August 2021 and June 2022., Methods: In African countries, baseline data were collected from 14 countries (n=15,375) during the first Omicron wave, and follow-up data were collected from 7 countries (n=7179) after the wave. In Asia Pacific countries, baseline data were collected from 14 countries (n=12,866) before the first Omicron wave, and follow-up data were collected from 9 countries (n=8737) after the wave. Countries' socioeconomic and health profiles were retrieved from relevant databases. To construct the SVI for each of the 4 data sets, variables associated with COVID-19 protective behaviors were included in a factor analysis using polychoric correlation with varimax rotation. Influential factors were adjusted for cardinality, summed, and min-max normalized from 0 to 1 (most to least vulnerable). Scores for compliance with the WHO advice were calculated using individuals' self-reported protective behaviors against COVID-19. Multiple linear regression analyses were used to assess the associations between the SVI and scores for compliance to WHO advice to validate the index., Results: In Africa, factors contributing to social vulnerability included literacy and media use, trust in health care workers and government, and country income and infrastructure. In Asia Pacific, social vulnerability was determined by literacy, country income and infrastructure, and population density. The index was associated with compliance with the WHO advice in both time points in African countries but only during the follow-up period in Asia Pacific countries. At baseline, the index values in African countries ranged from 0.00 to 0.31 in 13 countries, with 1 country having an index value of 1.00. The index values in Asia Pacific countries ranged from 0.00 to 0.23 in 12 countries, with 2 countries having index values of 0.79 and 1.00. During the follow-up phase, the index values decreased in 6 of 7 African countries and the 2 most vulnerable Asia Pacific countries. The index values of the least vulnerable countries remained unchanged in both regions., Conclusions: In both regions, significant inequalities in social vulnerability to compliance with WHO advice were observed at baseline, and the gaps became larger after the first Omicron wave. Understanding the dimensions that influence social vulnerability to protective behaviors against COVID-19 may underpin targeted interventions to enhance compliance with WHO recommendations and mitigate the impact of future pandemics among vulnerable groups., (©Suladda Pongutta, Viroj Tangcharoensathien, Kathy Leung, Heidi J Larson, Leesa Lin. Originally published in JMIR Public Health and Surveillance (https://publichealth.jmir.org), 13.08.2024.)
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- 2024
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11. A Five-MicroRNA Signature Predicts the Prognosis in Nasopharyngeal Carcinoma.
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Wu, Shixiong, Zhang, Cen, Xie, Jing, Li, Shuang, and Huang, Shuo
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NASOPHARYNX cancer ,OVERALL survival ,RECEIVER operating characteristic curves ,SURVIVAL rate ,PROGNOSIS ,MESSENGER RNA ,CARCINOMA - Abstract
Background: There is no effective prognostic signature that could predict the prognosis of nasopharyngeal carcinoma (NPC). Methods: We constructed a prognostic signature based on five microRNAs using random forest and Least Absolute Shrinkage And Selection Operator (LASSO) algorithm on the GSE32960 cohort (N = 213). We verified its prognostic value using three independent external validation cohorts (GSE36682, N = 62; GSE70970, N = 246; and TCGA-HNSC, N = 523). Through principal component analysis, receiver operating characteristic curve analysis, and C-index calculation, we confirmed the predictive accuracy of this prognostic signature. Results: We calculated the risk score based on the LASSO algorithm and divided the patients into high- and low-risk groups according to the calculated optimal cutoff value. The patients in the high-risk group tended to have a worse prognosis outcome and chemotherapy response. The time-dependent receiver operating characteristic curve showed that the 1-year overall survival rate of the five-microRNA signature had an area under the curve of more than 0.83. A functional annotation analysis of the five-microRNA signature showed that the patients in the high-risk group were usually accompanied by activation of DNA repair and MYC-target pathways, while the patients in the low-risk group had higher immune-related pathway signals. Conclusions: We constructed a five-microRNA prognostic signature, which could accurately predict the prognosis of nasopharyngeal carcinoma, and constructed a nomogram that could conveniently predict the overall survival of patients. [ABSTRACT FROM AUTHOR]
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- 2021
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12. A Five-MicroRNA Signature Predicts the Prognosis in Nasopharyngeal Carcinoma
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Shixiong Wu, Cen Zhang, Jing Xie, Shuang Li, and Shuo Huang
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nasopharyngeal carcinoma ,microRNA ,prognosis ,chemotherapy response ,predicts ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
BackgroundThere is no effective prognostic signature that could predict the prognosis of nasopharyngeal carcinoma (NPC).MethodsWe constructed a prognostic signature based on five microRNAs using random forest and Least Absolute Shrinkage And Selection Operator (LASSO) algorithm on the GSE32960 cohort (N = 213). We verified its prognostic value using three independent external validation cohorts (GSE36682, N = 62; GSE70970, N = 246; and TCGA-HNSC, N = 523). Through principal component analysis, receiver operating characteristic curve analysis, and C-index calculation, we confirmed the predictive accuracy of this prognostic signature.ResultsWe calculated the risk score based on the LASSO algorithm and divided the patients into high- and low-risk groups according to the calculated optimal cutoff value. The patients in the high-risk group tended to have a worse prognosis outcome and chemotherapy response. The time-dependent receiver operating characteristic curve showed that the 1-year overall survival rate of the five-microRNA signature had an area under the curve of more than 0.83. A functional annotation analysis of the five-microRNA signature showed that the patients in the high-risk group were usually accompanied by activation of DNA repair and MYC-target pathways, while the patients in the low-risk group had higher immune-related pathway signals.ConclusionsWe constructed a five-microRNA prognostic signature, which could accurately predict the prognosis of nasopharyngeal carcinoma, and constructed a nomogram that could conveniently predict the overall survival of patients.
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- 2021
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13. Predicting Masaoka-Koga Clinical Stage of Thymic Epithelial Tumors Using Preoperative Spectral Computed Tomography Imaging
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Qing Zhou, Xiaoai Ke, Jiangwei Man, Bin Zhang, Furong Wang, and Junlin Zhou
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thymic epithelial tumor ,spectral CT ,imaging ,Masaoka-Koga clinical staging ,predicts ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
ObjectivesTo investigate the utility of spectral computed tomography (CT) parameters for the prediction of the preoperative Masaoka-Koga stage of thymic epithelial tumors (TETs).Materials and MethodsFifty-four patients with TETs, aged from 37 to 73 years old, an average age of 55.56 ± 9.79 years, were included in the study.According to the Masaoka-Koga staging method, there were 19 cases of stage I, 15 cases of stage II, 8 cases of stage III, and 12 cases of stage IV disease. All patients underwent dual-phase enhanced energy spectral CT scans. Regions of interest (ROIs) were defined in sections of the lesion with homogeneous density, the thoracic aorta at the same level as the lesion, the outer fat layer of the lesion, and the anterior chest wall fat layer. The single-energy CT value at 40-140 keV, iodine concentration, and energy spectrum curve of all lesion and thoracic aorta were obtained. The energy spectrum CT parameters of the lesions, extracapsular fat of the lesions, and anterior chest wall fat in stage I and stage II were obtained. The energy spectrum CT parameters of the lesions, enlarged lymph nodes and intravascular emboli in the 3 groups were obtained. The slope of the energy spectrum curve and the normalized iodine concentration were calculated.ResultsIn stage I lesions, there was a statistically significant difference between the slope of the energy spectrum curve for the lesion and those of the fat outside the lesion and the anterior chest wall in the arteriovenous phase (P0.05). The energy spectrum curve of the tumor parenchyma was consistent with that of the enlarged lymph nodes and intravascular emboli. The two radiologists have strong consistency in evaluating TETs Masaoka-Koga staging, The Kappa coefficient is 0.873,(95%CI:0.768-0.978).ConclusionSpectral CT parameters, especially the energy spectrum curve and slope, are valuable for preoperative TET and can be used in preoperative staging prediction.
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- 2021
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14. Predicting Masaoka-Koga Clinical Stage of Thymic Epithelial Tumors Using Preoperative Spectral Computed Tomography Imaging.
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Zhou, Qing, Ke, Xiaoai, Man, Jiangwei, Zhang, Bin, Wang, Furong, and Zhou, Junlin
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DUAL energy CT (Tomography) ,EPITHELIAL tumors ,THYMUS tumors ,THORACIC aorta ,COMPUTED tomography ,LYMPH nodes - Abstract
Objectives: To investigate the utility of spectral computed tomography (CT) parameters for the prediction of the preoperative Masaoka-Koga stage of thymic epithelial tumors (TETs). Materials and Methods: Fifty-four patients with TETs, aged from 37 to 73 years old, an average age of 55.56 ± 9.79 years, were included in the study.According to the Masaoka-Koga staging method, there were 19 cases of stage I, 15 cases of stage II, 8 cases of stage III, and 12 cases of stage IV disease. All patients underwent dual-phase enhanced energy spectral CT scans. Regions of interest (ROIs) were defined in sections of the lesion with homogeneous density, the thoracic aorta at the same level as the lesion, the outer fat layer of the lesion, and the anterior chest wall fat layer. The single-energy CT value at 40-140 keV, iodine concentration, and energy spectrum curve of all lesion and thoracic aorta were obtained. The energy spectrum CT parameters of the lesions, extracapsular fat of the lesions, and anterior chest wall fat in stage I and stage II were obtained. The energy spectrum CT parameters of the lesions, enlarged lymph nodes and intravascular emboli in the 3 groups were obtained. The slope of the energy spectrum curve and the normalized iodine concentration were calculated. Results: In stage I lesions, there was a statistically significant difference between the slope of the energy spectrum curve for the lesion and those of the fat outside the lesion and the anterior chest wall in the arteriovenous phase (P<0.001, P<0.001). The energy spectrum curve of the tumor parenchyma was the opposite of that of the extracapsular fat. In stage II lesions, there was a statistically significant difference between the slope of the energy spectrum curve for the anterior chest wall and those of the lesion and the fat outside the lesion in the arteriovenous phase(P<0.001, P<0.001). The energy spectrum curve of the tumor parenchyma was consistent with that of the extracapsular fat. Distinction between stage I and II tumors be evaluated by comparing the energy spectrum curves of the mass and the extracapsular fat of the mass. The accuracy rate of is 79.4%. For stages III and IV, there was no significant difference in the slope of the energy spectrum curve of the tumor parenchyma, metastatic lymph node, and intravascular embolism (P>0.05). The energy spectrum curve of the tumor parenchyma was consistent with that of the enlarged lymph nodes and intravascular emboli. The two radiologists have strong consistency in evaluating TETs Masaoka-Koga staging, The Kappa coefficient is 0.873,(95%CI:0.768-0.978). Conclusion: Spectral CT parameters, especially the energy spectrum curve and slope, are valuable for preoperative TET and can be used in preoperative staging prediction. [ABSTRACT FROM AUTHOR]
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- 2021
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15. Brain volume abnormalities and clinical outcomes following paediatric traumatic brain injury
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Niall J Bourke, Célia Demarchi, Sara De Simoni, Ravjeet Samra, Maneesh C Patel, Adam Kuczynski, Quen Mok, Neil Wimalasundera, Fareneh Vargha-Khadem, David J Sharp, Action Medical Research, Imperial College Healthcare NHS Trust- BRC Funding, National Institute for Health Research, and UK DRI Ltd
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cognition ,Adult ,paediatric ,Adolescent ,AXONAL INJURY ,Clinical Neurology ,CHILDREN ,Nervous System Malformations ,LONGITUDINAL CHANGES ,Young Adult ,Brain Injuries, Traumatic ,developmental ,Humans ,Gray Matter ,Child ,11 Medical and Health Sciences ,volume ,Science & Technology ,Neurology & Neurosurgery ,traumatic brain injury ,Neurosciences ,Brain ,Magnetic Resonance Imaging ,White Matter ,PREDICTS ,17 Psychology and Cognitive Sciences ,Brain Injuries ,MODERATE ,Neurosciences & Neurology ,Neurology (clinical) ,Atrophy ,Life Sciences & Biomedicine ,MRI - Abstract
Long-term outcomes are difficult to predict after paediatric traumatic brain injury. The presence or absence of focal brain injuries often do not explain cognitive, emotional and behavioural disabilities that are common and disabling. In adults, traumatic brain injury produces progressive brain atrophy that can be accurately measured and is associated with cognitive decline. However, the effect of paediatric traumatic brain injury on brain volumes is more challenging to measure because of its interaction with normal brain development. Here we report a robust approach to the individualized estimation of brain volume following paediatric traumatic brain injury and investigate its relationship to clinical outcomes. We first used a large healthy control dataset (n > 1200, age 8–22) to describe the healthy development of white and grey matter regions through adolescence. Individual estimates of grey and white matter regional volume were then generated for a group of moderate/severe traumatic brain injury patients injured in childhood (n = 39, mean age 13.53 ± 1.76, median time since injury = 14 months, range 4–168 months) by comparing brain volumes in patients to age-matched controls. Patients were individually classified as having low or normal brain volume. Neuropsychological and neuropsychiatric outcomes were assessed using standardized testing and parent/carer assessments. Relative to head size, grey matter regions decreased in volume during normal adolescence development whereas white matter tracts increased in volume. Traumatic brain injury disrupted healthy brain development, producing reductions in both grey and white matter brain volumes after correcting for age. Of the 39 patients investigated, 11 (28%) had at least one white matter tract with reduced volume and seven (18%) at least one area of grey matter with reduced volume. Those classified as having low brain volume had slower processing speed compared to healthy controls, emotional impairments, higher levels of apathy, increased anger and learning difficulties. In contrast, the presence of focal brain injury and microbleeds were not associated with an increased risk of these clinical impairments. In summary, we show how brain volume abnormalities after paediatric traumatic brain injury can be robustly calculated from individual T1 MRI using a large normative dataset that allows the effects of healthy brain development to be controlled for. Using this approach, we show that volumetric abnormalities are common after moderate/severe traumatic brain injury in both grey and white matter regions, and are associated with higher levels of cognitive, emotional and behavioural abnormalities that are common after paediatric traumatic brain injury.
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- 2022
16. Determining the optimal gait modification strategy for patients with knee osteoarthritis: Trunk lean or medial thrust?
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Gerbrands, Tim, Pisters, Martijn, Verschueren, Sabine, and Vanwanseele, Benedicte
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BASE-LINE ,trunk lean ,Biophysics ,Knee adduction moment ,knee adduction moment ,Trunk lean ,FORCE ,Osteoarthritis ,ADDUCTION MOMENT ,Orthopedics and Sports Medicine ,LOAD ,REDUCE ,Science & Technology ,Rehabilitation ,DISEASE PROGRESSION ,Neurosciences ,FLEXION MOMENTS ,medial thrust ,Gait modification ,Medial thrust ,PREDICTS ,osteoarthritis ,Orthopedics ,gait modification ,BIOFEEDBACK ,Neurosciences & Neurology ,Life Sciences & Biomedicine ,WALKING ,Sport Sciences - Abstract
BACKGROUND: The gait modification strategies Trunk Lean and Medial Thrust have been shown to reduce the external knee adduction moment (EKAM) in patients with knee osteoarthritis which could contribute to reduced progression of the disease. Which strategy is most optimal differs between individuals, but the underlying mechanism that causes this remains unknown. RESEARCH QUESTION: Which gait parameters determine the optimal gait modification strategy for individual patients with knee osteoarthritis? METHODS: Forty-seven participants with symptomatic medial knee osteoarthritis underwent 3-dimensional motion analysis during comfortable gait and with two gait modification strategies: Medial Thrust and Trunk Lean. Kinematic and kinetic variables were calculated. Participants were then categorized into one of the two subgroups, based on the modification strategy that reduced the EKAM the most for them. Multiple logistic regression analysis with backward elimination was used to investigate the predictive nature of dynamic parameters obtained during comfortable walking on the optimal modification gait strategy. RESULTS: For 68.1 % of the participants, Trunk Lean was the optimal strategy in reducing the EKAM. Baseline characteristics, kinematics and kinetics did not differ significantly between subgroups during comfortable walking. Changes to frontal trunk and tibia angles correlated significantly with EKAM reduction during the Trunk Lean and Medial Thrust strategies, respectively. Regression analysis showed that MT is likely optimal when the frontal tibia angle range of motion and peak knee flexion angle in early stance during comfortable walking are high (R2Nagelkerke = 0.12). SIGNIFICANCE: Our regression model based solely on kinematic parameters from comfortable walking contained characteristics of the frontal tibia angle and knee flexion angle. As the model explains only 12.3 % of variance, clinical application does not seem feasible. Direct assessment of kinetics seems to be the most optimal strategy for selecting the most optimal gait modification strategy for individual patients with knee osteoarthritis. ispartof: GAIT & POSTURE vol:102 pages:1-9 ispartof: location:England status: published
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- 2023
17. Local species assemblages are influenced more by past than current dissimilarities in photosynthetic activity.
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Jung, M., Rowhani, P., Newbold, T., Bentley, L., Purvis, A., and Scharlemann, J. P. W.
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AMPHIBIANS , *SPECIES , *GROUND vegetation cover , *TIME series analysis , *REMOTE sensing , *VERTEBRATES , *FUNCTIONAL groups - Abstract
Most land on Earth has been changed by humans and past changes of land can have lasting influences on current species assemblages. Yet few globally representative studies explicitly consider such influences even though auxiliary data, such as from remote sensing, are readily available. Time series of satellite‐derived data have been commonly used to quantify differences in land‐surface attributes such as vegetation cover, which will among other things be influenced by anthropogenic land conversions and modifications. Here we quantify differences in current and past (up to five years before sampling) vegetation cover, and assess whether such differences differentially influence taxonomic and functional groups of species assemblages between spatial pairs of sites. Specifically, we correlated between‐site dissimilarity in photosynthetic activity of vegetation (the enhanced vegetation index) with the corresponding dissimilarity in local species assemblage composition from a global database using a common metric for both, the Bray–Curtis index. We found that dissimilarity in species assemblage composition was on average more influenced by dissimilarity in past than current photosynthetic activity, and that the influence of past dissimilarity increased when longer time periods were considered. Responses to past dissimilarity in photosynthetic activity also differed among taxonomic groups (plants, invertebrates, amphibians, reptiles, birds and mammals), with reptiles being among the most influenced by more dissimilar past photosynthetic activity. Furthermore, we found that assemblages dominated by smaller and more vegetation‐dependent species tended to be more influenced by dissimilarity in past photosynthetic activity than prey‐dependent species. Overall, our results have implications for studies that investigate species responses to current environmental changes and highlight the importance of past changes continuing to influence local species assemblage composition. We demonstrate how local species assemblages and satellite‐derived data can be linked and provide suggestions for future studies on how to assess the influence of past environmental changes on biodiversity. [ABSTRACT FROM AUTHOR]
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- 2019
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18. Variation of platelet function in clinical phenotypes of acute venous thromboembolism – Results from the GMP‐VTE project
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Kirsten Leineweber, Vincent ten Cate, Philipp S. Wild, Karl J. Lackner, Bianca Wagner, Stefan Heitmeier, Imke Meyer, Lisa Eggebrecht, Marina Panova-Noeva, Markus Nagler, Thomas Koeck, Jürgen H. Prochaska, Christoph Gerdes, Stavros Konstantinides, Hugo ten Cate, Henri M. H. Spronk, RS: Carim - B04 Clinical thrombosis and Haemostasis, Interne Geneeskunde, MUMC+: HVC Pieken Trombose (9), MUMC+: MA Alg Interne Geneeskunde (9), and MUMC+: HVC Trombosezorg (8)
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medicine.medical_specialty ,pulmonary embolism ,Platelet Function Tests ,PULMONARY-EMBOLISM ,platelet function ,Deep vein ,venous thromboembolism ,610 Medizin ,DETERMINANTS ,Gastroenterology ,deep vein thrombosis ,DISEASE ,Pathogenesis ,chemistry.chemical_compound ,Platelet degranulation ,RISK-FACTOR ,610 Medical sciences ,Internal medicine ,Humans ,Medicine ,Platelet ,cardiovascular diseases ,POPULATION ,Venous Thrombosis ,business.industry ,Hematology ,medicine.disease ,ABSENCE ,Thrombosis ,PREDICTS ,Pulmonary embolism ,ASPIRIN ,Adenosine diphosphate ,Phenotype ,Epinephrine ,medicine.anatomical_structure ,chemistry ,thrombin generation ,VOLUME ,business ,medicine.drug - Abstract
Background The role of platelets in the pathogenesis of venous thromboembolism (VTE) is receiving increasing attention; however, limited information is available on platelet function in the acute phase of the disease. Objective To characterize platelet function according to VTE phenotypes. Patients/Methods In total, 154 subjects (isolated pulmonary embolism [iPE], n = 28; isolated deep vein thrombosis [iDVT], n = 35; DVT+PE, n = 91) were included. In this study platelet function analyzer (PFA)-200, light transmission aggregometry (LTA), thrombin generation (TG) in presence (PRP) and absence (PFP) of platelets and platelet flow cytometry were investigated. LASSO regression was used to select clinical and platelet biomarkers that distinguish between VTE phenotypes. Results PFA-200 results did not differ between VTE phenotypes. LTA from DVT+PE subjects showed lowest maximum aggregation after epinephrine and adenosine diphosphate compared to iPE and iDVT. Lower % of PAC-1-positive platelets after in-vitro trigger were present in DVT+PE and iPE compared to iDVT. TG in PRP had lower peak height and velocity in DVT+PE and iPE against iDVT. The results of LASSO regression for the distinction between DVT+PE vs iDVT identified 18 variables (AUC =0.93) of which 72% were platelet biomarkers. For distinction between iPE and iDVT, 10 variables were selected (AUC = 0.96) of which 50% were platelet-related. Obesity was the only variable weakly discriminating between DVT+PE vs iPE (AUC = 0.66). Conclusion This explorative study suggests an important distinction between PE-related phenotypes and iDVT when considering clinical and platelet function data. Lower platelet-dependent TG along with reduced platelet reactivity suggest higher platelet degranulation in PE-dependent phenotypes compared to iDVT.
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- 2022
19. An atrial fibrillation-associated regulatory region modulates cardiac Tbx5 levels and arrhythmia susceptibility
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Fernanda M Bosada, Karel van Duijvenboden, Alexandra E Giovou, Mathilde R Rivaud, Jae-Sun Uhm, Arie O Verkerk, Bastiaan J Boukens, Vincent M Christoffels, Experimental Cardiology, Medical Biology, ACS - Heart failure & arrhythmias, ARD - Amsterdam Reproduction and Development, Cardiology, and ACS - Amsterdam Cardiovascular Sciences
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TRANSCRIPTION FACTOR TBX5 ,General Immunology and Microbiology ,epigenetics ,Mouse ,MUTATIONS ,General Neuroscience ,VARIANT ,regulation ,General Medicine ,General Biochemistry, Genetics and Molecular Biology ,genetically altered ,DUPLICATION ,PREDICTS ,genetic variation ,gene expression ,EPIDEMIOLOGY ,atrial fibrillation ,transgenic models ,arrhythmias ,HOLT-ORAM-SYNDROME ,COMMON ,ALLELIC HETEROGENEITY ,GENE-EXPRESSION - Abstract
Heart development and rhythm control are highly Tbx5 dosage-sensitive. TBX5 haploinsufficiency causes congenital conduction disorders, whereas increased expression levels of TBX5 in human heart samples has been associated with atrial fibrillation (AF). We deleted the conserved mouse orthologues of two independent AF-associated genomic regions in the Tbx5 locus, one intronic (RE(int)) and one downstream (RE(down)) of Tbx5. In both lines, we observed a modest (30%) increase of Tbx5 in the postnatal atria. To gain insight into the effects of slight dosage increase in vivo, we investigated the atrial transcriptional, epigenetic and electrophysiological properties of both lines. Increased atrial Tbx5 expression was associated with induction of genes involved in development, ion transport and conduction, with increased susceptibility to atrial arrhythmias, and increased action potential duration of atrial cardiomyocytes. We identified an AF-associated variant in the human RE(int) that increases its transcriptional activity. Expression of the AF-associated transcription factor Prrx1 was induced in Tbx5RE(int)KO cardiomyocytes. We found that some of the transcriptional and functional changes in the atria caused by increased Tbx5 expression were normalized when reducing cardiac Prrx1 expression in Tbx5RE(int)KO mice, indicating an interaction between these two AF genes. We conclude that modest increases in expression of dose-dependent transcription factors, caused by common regulatory variants, significantly impact on the cardiac gene regulatory network and disease susceptibility.
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- 2023
20. Does belief in free will influence biological motion perception?
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Marcel Brass, Nikolaus F. Troje, Peng W, and Emiel Cracco
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Computer science ,media_common.quotation_subject ,AGENCY ,Social Sciences ,Experimental and Cognitive Psychology ,General Medicine ,DISBELIEF ,PREDICTS ,Biological motion perception ,Arts and Humanities (miscellaneous) ,EXTERNAL LOCUS ,Developmental and Educational Psychology ,Free will ,Cognitive psychology ,media_common - Abstract
Previous research suggests that belief in free will correlates with intentionality attribution. However, whether belief in free will is also related to more basic social processes is unknown. Based on evidence that biological motion contains intentionality cues that observers spontaneously extract, we investigate whether people who believe more in free will, or in related constructs, such as dualism and determinism, would be better at picking up such cues and therefore at detecting biological agents hidden in noise, or would be more inclined to detect intentionality cues and therefore to detect biological agents even when there are none. Signal detection theory was used to measure participants' ability to detect biological motion from scrambled background noise (d ') and their response bias (c) in doing so. In two experiments, we found that belief in determinism and belief in dualism, but not belief in free will, were associated with biological motion perception. However, no causal effect was found when experimentally manipulating free will-related beliefs. In sum, our results show that biological motion perception, a low-level social process, is related to high-level beliefs about dualism and determinism.
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- 2023
21. MODISTools – downloading and processing MODIS remotely sensed data in R
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Sean L. Tuck, Helen R.P. Phillips, Rogier E. Hintzen, Jörn P.W. Scharlemann, Andy Purvis, and Lawrence N. Hudson
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Conservation biology ,earth observation ,global change ,land processes ,macroecology ,PREDICTS ,Ecology ,QH540-549.5 - Abstract
Abstract Remotely sensed data – available at medium to high resolution across global spatial and temporal scales – are a valuable resource for ecologists. In particular, products from NASA's MODerate‐resolution Imaging Spectroradiometer (MODIS), providing twice‐daily global coverage, have been widely used for ecological applications. We present MODISTools, an R package designed to improve the accessing, downloading, and processing of remotely sensed MODIS data. MODISTools automates the process of data downloading and processing from any number of locations, time periods, and MODIS products. This automation reduces the risk of human error, and the researcher effort required compared to manual per‐location downloads. The package will be particularly useful for ecological studies that include multiple sites, such as meta‐analyses, observation networks, and globally distributed experiments. We give examples of the simple, reproducible workflow that MODISTools provides and of the checks that are carried out in the process. The end product is in a format that is amenable to statistical modeling. We analyzed the relationship between species richness across multiple higher taxa observed at 526 sites in temperate forests and vegetation indices, measures of aboveground net primary productivity. We downloaded MODIS derived vegetation index time series for each location where the species richness had been sampled, and summarized the data into three measures: maximum time‐series value, temporal mean, and temporal variability. On average, species richness covaried positively with our vegetation index measures. Different higher taxa show different positive relationships with vegetation indices. Models had high R2 values, suggesting higher taxon identity and a gradient of vegetation index together explain most of the variation in species richness in our data. MODISTools can be used on Windows, Mac, and Linux platforms, and is available from CRAN and GitHub (https://github.com/seantuck12/MODISTools).
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- 2014
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22. Incidence of Hepatocellular Carcinoma and Decompensated Liver Cirrhosis and Prognostic Accuracy of the PAGE-B HCC Risk Score in a Low Endemic Hepatitis B Virus Infected Population
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Bollerup, Signe, Engsig, Frederik, Hallager, Sofie, Mocroft, Amanda, Roege, Birgit T., Christensen, Peer B., Laursen, Alex L., Krarup, Henrik, Clausen, Mette R., Thielsen, Peter, Madsen, Lone G., Noerregaard, Lars, Barfod, Toke S., Balslev, Ulla, Tarp, Britta, Hansen, Jesper B., Mygind, Lone H., Gerstoft, Jan, Weis, Nina, Bollerup, Signe, Engsig, Frederik, Hallager, Sofie, Mocroft, Amanda, Roege, Birgit T., Christensen, Peer B., Laursen, Alex L., Krarup, Henrik, Clausen, Mette R., Thielsen, Peter, Madsen, Lone G., Noerregaard, Lars, Barfod, Toke S., Balslev, Ulla, Tarp, Britta, Hansen, Jesper B., Mygind, Lone H., Gerstoft, Jan, and Weis, Nina
- Abstract
Purpose: We aimed to determine incidence of hepatocellular carcinoma (HCC) and decompensated liver cirrhosis in persons with chronic hepatitis B virus (HBV) infection in Denmark stratified by disease phase, liver cirrhosis, and treatment status at baseline. Additionally, we aimed to assess the prognostic value of the PAGE-B HCC risk score in a mainly non-cirrhotic population. Patients and Methods: In this register-based cohort study, we included all individuals over the age of 18, with chronic HBV infection first registered between 2002 and 2016 in at least one of three nationwide registers. The study population was followed until HCC, decompensated liver cirrhosis, death, emigration, or December 31, 2017, which ever came first. Results: Among 6016 individuals included in the study, 10 individuals with and 23 without baseline liver cirrhosis developed HCC during a median follow up of 7.3 years (range 0.0-15.5). This corresponded to five-year cumulative incidences of 7.1% (95% confidence interval (CI) 2.0-12.3) and 0.2% (95% CI 0.1-0.4) in persons with and without baseline liver cirrhosis. The five-year cumulative incidence of decompensated liver cirrhosis was 0.7% (95% CI 0.5-1.0). Among 2038 evaluated for liver events stratified by disease phase, incidence of HCC was low in all who were non-cirrhotic and untreated for HBV at baseline. PAGE-B score was evaluated in 1529 persons. The 5-year cumulative incidence of HCC was 0, 0.8 (95% CI 0.5-1.8), and 8.7 (95% CI 1.0-16.4) in persons scoring 17, respectively (c-statistic 0.91 (95% CI 0.84-0.98)). Conclusion: We found low incidence of HCC and decompensated liver cirrhosis in persons with chronic HBV infection in Denmark. Moreover, the PAGE-B score showed good accuracy for five-year risk of developing HCC in the population with chronic HBV infection in Denmark.
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- 2022
23. Activation of Oncogenic and Immune-Response Pathways Is Linked to Disease-Specific Survival in Merkel Cell Carcinoma
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Benjamin Sundqvist, Sami Kilpinen, Tom Böhling, Virve Koljonen, Harri Sihto, Department of Pathology, HUSLAB, Molecular and Integrative Biosciences Research Programme, Medicum, Tom Böhling / Principal Investigator, Department of Surgery, HUS Musculoskeletal and Plastic Surgery, and Plastiikkakirurgian yksikkö
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signaling pathway ,Cancer Research ,PROMOTES ,3122 Cancers ,POLYOMAVIRUS ,survival ,COLORECTAL-CANCER ,PREDICTS ,EXPRESSION PROFILES ,Merkel cell carcinoma ,Oncology ,gene expression ,AXIS ,transcriptome ,GROWTH-FACTOR RECEPTOR - Abstract
Background: Merkel cell carcinoma (MCC) is a rare but highly aggressive neuroendocrine carcinoma of the skin with a poor prognosis. Improving the prognosis of MCC by means of targeted therapies requires further understanding of the mechanisms that drive tumor progression. In this study, we aimed to identify the genes, processes, and pathways that play the most crucial roles in determining MCC outcomes. Methods: We investigated transcriptomes generated by RNA sequencing of formalin-fixed paraffin-embedded tissue samples of 102 MCC patients and identified the genes that were upregulated among survivors and in patients who died from MCC. We subsequently cross-referenced these genes with online databases to investigate the functions and pathways they represent. We further investigated differential gene expression based on viral status in patients who died from MCC. Results: We found several novel genes associated with MCC-specific survival. Genes upregulated in patients who died from MCC were most notably associated with angiogenesis and the PI3K-Akt and MAPK pathways; their expression predominantly had no association with viral status in patients who died from MCC. Genes upregulated among survivors were largely associated with antigen presentation and immune response. Conclusion: This outcome-based discrepancy in gene expression suggests that these pathways and processes likely play crucial roles in determining MCC outcomes.
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- 2022
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24. Advanced interventions in the pre-hospital resuscitation of patients with non-compressible haemorrhage after penetrating injuries
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Helicopter emergency medical services (HEMS) ,THORACOTOMY ,Penetrating injuries ,BLOOD-PRESSURE ,ASSOCIATION ,TRANSPORT ,PREDICTS ,ENDOVASCULAR BALLOON OCCLUSION ,CARDIAC-ARREST ,Pre-hospital ,TRAUMA PATIENTS ,AORTA REBOA ,Interventions ,MASSIVE TRANSFUSION - Abstract
Early haemorrhage control and minimizing the time to definitive care have long been the cornerstones of therapy for patients exsanguinating from non-compressible haemorrhage (NCH) after penetrating injuries, as only basic treatment could be provided on scene. However, more recently, advanced on-scene treatments such as the transfusion of blood products, resuscitative thoracotomy (RT) and resuscitative endovascular balloon occlusion of the aorta (REBOA) have become available in a small number of pre-hospital critical care teams. Although these advanced techniques are included in the current traumatic cardiac arrest algorithm of the European Resuscitation Council (ERC), published in 2021, clear guidance on the practical application of these techniques in the pre-hospital setting is scarce. This paper provides a scoping review on how these advanced techniques can be incorporated into practice for the resuscitation of patients exsanguinating from NCH after penetrating injuries, based on available literature and the collective experience of several helicopter emergency medical services (HEMS) across Europe who have introduced these advanced resuscitation interventions into routine practice.
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- 2022
25. Iron deficiency impacts prognosis but less exercise capacity in heart failure with preserved ejection fraction
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Vanessa P. M. van Empel, Jerremy Weerts, Sandra Sanders-van Wijk, Arantxa Barandiarán Aizpurua, Hans-Peter Brunner-La Rocca, Christian Knackstedt, Mireille H A Spanjers, Michiel T H M Henkens, RS: Carim - H02 Cardiomyopathy, Cardiologie, RS: Carim - H01 Clinical atrial fibrillation, MUMC+: MA Med Staf Spec Cardiologie (9), and MUMC+: MA Alg Ond Onderz Cardiologie (9)
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heart failure with preserved ejection fraction ,lcsh:Diseases of the circulatory (Cardiovascular) system ,medicine.medical_specialty ,030204 cardiovascular system & hematology ,PRESSURE ,THERAPY ,PULMONARY-HYPERTENSION ,03 medical and health sciences ,0302 clinical medicine ,Quality of life ,Original Research Articles ,Internal medicine ,FERRIC CARBOXYMALTOSE ,medicine ,Humans ,Original Research Article ,030212 general & internal medicine ,ANEMIA ,Depression (differential diagnoses) ,Heart Failure ,Exercise Tolerance ,Ejection fraction ,Anemia, Iron-Deficiency ,business.industry ,Thyroid disease ,Iron deficiency ,WOMEN ,Stroke Volume ,Prognosis ,medicine.disease ,Pulmonary hypertension ,DYSFUNCTION ,PREDICTS ,PREVALENCE ,exercise capacity ,lcsh:RC666-701 ,Heart failure ,Quality of Life ,Cardiology ,Cardiology and Cardiovascular Medicine ,business ,Heart failure with preserved ejection fraction ,Body mass index - Abstract
Aims Whether and how iron deficiency (ID) impacts patients with heart failure (HF) with preserved ejection fraction (HFpEF) remain unclear. The aim of our study was to investigate the impact of ID on functional status, exercise capacity, and prognosis in HFpEF. Methods and results The study population consisted of 300 HFpEF patients. ID was defined as serum ferritin
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- 2021
26. Serum markers of pulmonary epithelial damage in systemic sclerosis‐associated interstitial lung disease and disease progression
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Maria Kokosi, Toby M. Maher, Felix Chua, Athol U. Wells, Rachel K. Hoyles, Vasilis Kouranos, Peter M. George, Jackie Donovan, Veronica Alfieri, Dina Visca, Philip L. Molyneaux, Angelo De Lauretis, Cécile Daccord, George Margaritopoulos, Christopher P. Denton, Elisabetta A. Renzoni, David Abraham, Carmel Stock, Voon H Ong, Piersante Sestini, and Action for Pulmonary Fibrosis
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Krebs von den Lungen‐ ,INVOLVEMENT ,CLEARANCE ,associated interstitial lung disease ,Respiratory System ,systemic sclerosis‐ ,CYFRA 21‐ ,Gastroenterology ,DLCO ,FIBROSIS ,Medicine ,Prospective Studies ,Prospective cohort study ,Lung ,11 Medical and Health Sciences ,HUMAN MUC1 MUCIN ,Interstitial lung disease ,respiratory system ,PREDICTS ,Krebs von den Lungen-6 ,Cohort ,Disease Progression ,biomarker ,CYFRA 21-1 ,Biomarker (medicine) ,DETERIORATION ,Life Sciences & Biomedicine ,Pulmonary and Respiratory Medicine ,medicine.medical_specialty ,disease progression ,MUC1 allele ,systemic sclerosis-associated interstitial lung disease ,VON DEN LUNGEN-6 ,FEV1/FVC ratio ,Antigens, Neoplasm ,Internal medicine ,Humans ,Retrospective Studies ,Keratin-19 ,Science & Technology ,Scleroderma, Systemic ,business.industry ,Retrospective cohort study ,KL-6 LEVELS ,medicine.disease ,SURFACTANT PROTEIN-D ,SEVERITY ,Lung Diseases, Interstitial ,business ,Biomarkers - Abstract
Background and objective The course of systemic sclerosis-associated interstitial lung disease (SSc-ILD) is highly variable, and accurate prognostic markers are needed. KL-6 is a mucin-like glycoprotein (MUC1) expressed by type II pneumocytes, while CYFRA 21-1 is expressed by alveolar and bronchiolar epithelial cells. Both are released into the blood from cell injury. Methods Serum KL-6 and CYFRA 21-1 levels were measured in a retrospective (n = 189) and a prospective (n = 118) cohort of SSc patients. Genotyping of MUC1 rs4072037 was performed. Linear mixed-effect models were used to evaluate the relationship with change in lung function parameters over time, while association with survival was evaluated with Cox proportional hazard analysis. Results In both cohorts, KL-6 and CYFRA 21-1 were highest in patients with lung involvement, and in patients with extensive rather than limited ILD. KL-6 was higher in patients carrying the MUC1 rs4072037 G allele in both cohorts. In patients with SSc-ILD, serum KL-6, but not CYFRA 21-1, was significantly associated with DLCO decline in both cohorts (P = 0.001 and P = 0.004, respectively), and with FVC decline in the retrospective cohort (P = 0.005), but not the prospective cohort. When combining the cohorts and subgrouping by severity (median CPI = 45.97), KL-6 remained predictive of decline in DLCO in both milder (P = 0.007) and more severe disease (P = 0.02) on multivariable analysis correcting for age, gender, ethnicity, smoking history and MUC1 allele carriage. Conclusion Our results suggest serum KL-6 predicts decline in lung function in SSc, suggesting its clinical utility in risk stratification for progressive SSc-ILD.
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- 2020
27. Incidence of Hepatocellular Carcinoma and Decompensated Liver Cirrhosis and Prognostic Accuracy of the PAGE-B HCC Risk Score in a Low Endemic Hepatitis B Virus Infected Population
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Signe Bollerup, Frederik Engsig, Sofie Hallager, Amanda Mocroft, Birgit T Roege, Peer B Christensen, Alex L Laursen, Henrik Krarup, Mette R Clausen, Peter Thielsen, Lone G Madsen, Lars Noerregaard, Toke S Barfod, Ulla Balslev, Britta Tarp, Jesper B Hansen, Lone H Mygind, Jan Gerstoft, and Nina Weis
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ANTIVIRAL TREATMENT ,OUTCOMES ,SERUM ALANINE AMINOTRANSFERASE ,viral hepatitis ,morbidity ,PROGRESSION ,HBEAG ,DISEASE ,PREDICTS ,UPPER LIMITS ,MANAGEMENT ,Scandinavia ,CAUCASIANS ,hepatitis B virus ,nationwide ,Journal of Hepatocellular Carcinoma - Abstract
Signe Bollerup,1 Frederik Engsig,1 Sofie Hallager,1 Amanda Mocroft,2,3 Birgit T Roege,4 Peer B Christensen,5,6 Alex L Laursen,7 Henrik Krarup,8,9 Mette R Clausen,10 Peter Thielsen,11 Lone G Madsen,12,13 Lars Noerregaard,14 Toke S Barfod,15 Ulla Balslev,16 Britta Tarp,17 Jesper B Hansen,9 Lone H Mygind,18 Jan Gerstoft,13,19 Nina Weis1,13 1Department of Infectious Diseases, Copenhagen University Hospital, Hvidovre, Denmark; 2Centre for Clinical Research, Epidemiology, Modelling and Evaluation (CREME), Institute for Global Health, UCL, London, England; 3Centre of Excellence for Health, Immunity and Infections (CHIP) and PERSIMUNE, Copenhagen University Hospital, Rigshospitalet, Copenhagen, Denmark; 4Department of Internal Medicine, Kolding Hospital, Kolding, Denmark; 5Department of Infectious Diseases, Odense University Hospital, Odense, Denmark; 6Clinical Institute, University of Southern Denmark, Odense, Denmark; 7Department of Infectious Diseases, Aarhus University Hospital, Aarhus, Denmark; 8Department of Molecular Diagnostics, Aalborg University Hospital, Aalborg, Denmark; 9Department of Medical Gastroenterology, Aalborg University Hospital, Aalborg, Denmark; 10Department of Medical Gastroenterology and Hepatology, Copenhagen University Hospital, Rigshospitalet, Copenhagen, Denmark; 11Department of Gastroenterology, Herlev Hospital, Herlev, Denmark; 12Department of Medical Gastroenterology, Zealand University Hospital, Koege, Denmark; 13Department of Clinical Medicine, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark; 14Department of Lung- and Infectious Diseases, North Zealand Hospital, Hilleroed, Denmark; 15Department of Internal Medicine and Infectious Diseases, Zealand University Hospital, Roskilde, Denmark; 16Department of Infectious Diseases, Herlev Hospital, Herlev, Denmark; 17Diagnostic Centre, University Research Clinic for Innovative Patient Pathways, Silkeborg Regional Hospital, Silkeborg, Denmark; 18Department of Infectious Diseases, Aalborg University Hospital, Aalborg, Denmark; 19Department of Infectious Diseases, Copenhagen University Hospital, Rigshospitalet, Copenhagen, DenmarkCorrespondence: Nina Weis, Department of Infectious Diseases, Copenhagen University Hospital, Hvidovre, Denmark, Tel: +45 38623514, Email Nina.Weis@regionh.dkPurpose: We aimed to determine incidence of hepatocellular carcinoma (HCC) and decompensated liver cirrhosis in persons with chronic hepatitis B virus (HBV) infection in Denmark stratified by disease phase, liver cirrhosis, and treatment status at baseline. Additionally, we aimed to assess the prognostic value of the PAGE-B HCC risk score in a mainly non-cirrhotic population.Patients and Methods: In this register-based cohort study, we included all individuals over the age of 18, with chronic HBV infection first registered between 2002 and 2016 in at least one of three nationwide registers. The study population was followed until HCC, decompensated liver cirrhosis, death, emigration, or December 31, 2017, which ever came first.Results: Among 6016 individuals included in the study, 10 individuals with and 23 without baseline liver cirrhosis developed HCC during a median follow up of 7.3 years (range 0.0â 15.5). This corresponded to five-year cumulative incidences of 7.1% (95% confidence interval (CI) 2.0â 12.3) and 0.2% (95% CI 0.1â 0.4) in persons with and without baseline liver cirrhosis. The five-year cumulative incidence of decompensated liver cirrhosis was 0.7% (95% CI 0.5â 1.0). Among 2038 evaluated for liver events stratified by disease phase, incidence of HCC was low in all who were non-cirrhotic and untreated for HBV at baseline. PAGE-B score was evaluated in 1529 persons. The 5-year cumulative incidence of HCC was 0, 0.8 (95% CI 0.5â 1.8), and 8.7 (95% CI 1.0â 16.4) in persons scoring < 10, 10â 17 and > 17, respectively (c-statistic 0.91 (95% CI 0.84â 0.98)).Conclusion: We found low incidence of HCC and decompensated liver cirrhosis in persons with chronic HBV infection in Denmark. Moreover, the PAGE-B score showed good accuracy for five-year risk of developing HCC in the population with chronic HBV infection in Denmark.Keywords: hepatitis B virus, viral hepatitis, Scandinavia, morbidity, nationwide
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- 2022
28. Checkpoint protein expression in the tumor microenvironment defines the outcome of classical Hodgkin lymphoma patients
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Kristiina Karihtala, Suvi-Katri Leivonen, Marja-Liisa Karjalainen-Lindsberg, Fong Chun Chan, Christian Steidl, Teijo Pellinen, Sirpa Leppä, HUS Comprehensive Cancer Center, Department of Oncology, University of Helsinki, Digital Precision Cancer Medicine (iCAN), ATG - Applied Tumor Genomics, Faculty of Medicine, Research Programs Unit, HUSLAB, Department of Pathology, Institute for Molecular Medicine Finland, and Precision Systems Medicine
- Subjects
Transplantation ,Predicts ,Survival ,T-Lymphocytes ,Macrophages ,3122 Cancers ,Hematology ,Hodgkin Disease ,Analysis reveals ,Blockade ,Nivolumab ,Tumor Microenvironment ,Humans ,Brentuximab vedotin ,Neoplasm Recurrence, Local ,Regulatory t-cells ,Pembrolizumab - Abstract
Emerging evidence indicates a major impact for the tumor microenvironment (TME) and immune escape in the pathogenesis and clinical course of classical Hodgkin lymphoma (cHL). We used gene expression profiling (n = 88), CIBERSORT, and multiplex immunohistochemistry (n = 131) to characterize the immunoprofile of cHL TME and correlated the findings with survival. Gene expression analysis divided tumors into subgroups with T cell-inflamed and -noninflamed TME. Several macrophage-related genes were upregulated in samples with the non–T cell-inflamed TME, and based on the immune cell proportions, the samples clustered according to the content of T cells and macrophages. A cluster with high proportions of checkpoint protein (programmed cell death protein 1, PD-1 ligands, indoleamine 2,3 dioxygenase 1, lymphocyte-activation gene 3, and T-cell immunoglobulin and mucin domain containing protein 3) positive immune cells translated to unfavorable overall survival (OS) (5-year OS 76% vs 96%; P = .010) and remained an independent prognostic factor for OS in multivariable analysis (HR, 4.34; 95% CI, 1.05-17.91; P = .043). cHL samples with high proportions of checkpoint proteins overexpressed genes coding for cytolytic factors, proposing paradoxically that they were immunologically active. This checkpoint molecule gene signature translated to inferior survival in a validation cohort of 290 diagnostic cHL samples (P < .001) and in an expansion cohort of 84 cHL relapse samples (P = .048). Our findings demonstrate the impact of T cell- and macrophage-mediated checkpoint system on the survival of patients with cHL.
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- 2022
29. Advanced interventions in the pre-hospital resuscitation of patients with non-compressible haemorrhage after penetrating injuries
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E. ter Avest, L. Carenzo, R. A. Lendrum, M. D. Christian, R. M. Lyon, C. Coniglio, M. Rehn, D. J. Lockey, and Z. B. Perkins
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Helicopter emergency medical services (HEMS) ,THORACOTOMY ,Resuscitation ,Endovascular Procedures ,Penetrating injuries ,BLOOD-PRESSURE ,Hemorrhage ,ASSOCIATION ,Balloon Occlusion ,Critical Care and Intensive Care Medicine ,TRANSPORT ,Hospitals ,PREDICTS ,ENDOVASCULAR BALLOON OCCLUSION ,Medisinske Fag: 700 [VDP] ,CARDIAC-ARREST ,Pre-hospital ,Humans ,TRAUMA PATIENTS ,AORTA REBOA ,Interventions ,MASSIVE TRANSFUSION - Abstract
Abstract Early haemorrhage control and minimizing the time to definitive care have long been the cornerstones of therapy for patients exsanguinating from non-compressible haemorrhage (NCH) after penetrating injuries, as only basic treatment could be provided on scene. However, more recently, advanced on-scene treatments such as the transfusion of blood products, resuscitative thoracotomy (RT) and resuscitative endovascular balloon occlusion of the aorta (REBOA) have become available in a small number of pre-hospital critical care teams. Although these advanced techniques are included in the current traumatic cardiac arrest algorithm of the European Resuscitation Council (ERC), published in 2021, clear guidance on the practical application of these techniques in the pre-hospital setting is scarce. This paper provides a scoping review on how these advanced techniques can be incorporated into practice for the resuscitation of patients exsanguinating from NCH after penetrating injuries, based on available literature and the collective experience of several helicopter emergency medical services (HEMS) across Europe who have introduced these advanced resuscitation interventions into routine practice. Graphical Abstract
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- 2022
30. Correlates and Consequences of an Acute Change in eGFR in Response to the SGLT2 Inhibitor Dapagliflozin in Patients with CKD
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Niels, Jongs, Glenn M, Chertow, Tom, Greene, John J V, McMurray, Anna Maria, Langkilde, Ricardo, Correa-Rotter, Naoki, Kashihara, Peter, Rossing, C David, Sjöström, Bergur V, Stefánsson, Robert D, Toto, David C, Wheeler, Hiddo J L, Heerspink, Real World Studies in PharmacoEpidemiology, -Genetics, -Economics and -Therapy (PEGET), and Groningen Kidney Center (GKC)
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Adult ,renal function ,EMPAGLIFLOZIN ,KIDNEY-DISEASE ,General Medicine ,dapagliflozin ,GLOMERULAR-FILTRATION-RATE ,PREDICTS ,Diabetes Mellitus, Type 2 ,Nephrology ,FALL ,Humans ,Albuminuria ,Benzhydryl Compounds ,Renal Insufficiency, Chronic ,Sodium-Glucose Transporter 2 Inhibitors ,chronic kidney disease ,Glomerular Filtration Rate - Abstract
Dapagliflozin reduces kidney failure risk in patients with CKD but can result in a reversible acute reduction in eGFR upon treatment initiation. Determinants of this eGFR reduction and its associations with efficacy and safety outcomes are unknown.The DAPA-CKD trial randomized 4304 adults with CKD and albuminuria to once-daily dapagliflozin 10 mg or placebo, added to standard care. We prespecified an analysis comparing the effects of dapagliflozin among patients who experienced relative reductions in eGFR (gt;10% orgt;0%-10%) or an increase in eGFR from baseline to 2 weeks and assessed long-term efficacy and safety thereafter.A total of 4157 (96.6%) patients had eGFR data available at baseline and at 2 weeks. In the dapagliflozin and placebo groups, 1026 (49.4%) and 494 (23.7%), respectively, experienced an acute reduction in eGFRgt;10%. Among patients receiving dapagliflozin, those with an acute reduction in eGFRgt;10% experienced a long-term eGFR decline of -1.58 ml/min per 1.73 msup2/supper year compared with -2.44 and -2.48 ml/min per 1.73 msup2/supper year among those experiencing a less pronounced reduction or increase in eGFR, respectively (iP/i-interaction=0.05). In the placebo group, long-term eGFR decline was -3.27, -3.84, and -3.77 ml/min per 1.73 msup2/supper year for acute eGFR reduction subgroups ofgt;10%,gt;0%-10%, or increase in eGFR (iP/i-interaction=0.48). Rates of serious adverse events and adverse events of special interest in patients randomized to dapagliflozin were unrelated to the acute eGFR change.Among patients with CKD and albuminuria treated with dapagliflozin, an acute reduction in eGFR (from baseline to 2 weeks) is not associated with higher rates of CKD progression.bClinical Trial registration number:/bA Study to Evaluate the Effect of Dapagliflozin on Renal Outcomes and Cardiovascular Mortality in Patients With Chronic Kidney Disease (Dapa-CKD) NCT03036150.
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- 2022
31. High expression of CPNE3 predicts adverse prognosis in acute myeloid leukemia.
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Fu, Lin, Fu, Huaping, Qiao, Jianlin, Pang, Yifan, Xu, Keman, Zhou, Lei, Wu, Qingyun, Li, Zhenyu, Ke, Xiaoyan, Xu, Kailin, and Shi, Jinlong
- Abstract
CPNE3, a member of a Ca
2+ -dependent phospholipid-binding protein family, was identified as a ligand of ERBB2 and has a more general role in carcinogenesis. Here, we identified the prognostic significance of CPNE3 expression in acute myeloid leukemia ( AML) patients based on two datasets. In the first microarray dataset ( n = 272), compared to low CPNE3 expression ( CPNE3low ), high CPNE3 expression ( CPNE3high ) was associated with adverse overall survival ( OS, P < 0.001) and event-free survival ( EFS, P < 0.001). In the second independent group of AML patients ( TCGA dataset, n = 179), CPNE3high was also associated with adverse OS and EFS ( OS, P = 0.01; EFS, P = 0.036). Notably, among CPNE3high patients, those received allogenic hematopoietic cell transplantation ( HCT) had longer OS and EFS than those with chemotherapy alone (allogeneic HCT, n = 40 vs chemotherapy, n = 46), but treatment modules played an insignificant role in the survival of CPNE3low patients (allogeneic HCT, n = 32 vs chemotherapy, n = 54). These results indicated that CPNE3high is an independent, adverse prognostic factor in AML and might guide treatment decisions towards allogeneic HCT. To understand its inherent mechanisms, we investigated genome-wide gene/micro RNA expression signatures and cell signaling pathways associated with CPNE3 expression. In conclusion, CPNE3high is an adverse prognostic biomarker for AML. Its effect may be attributed to the distinctive genome-wide gene/micro RNA expression and related cell signaling pathways. [ABSTRACT FROM AUTHOR]- Published
- 2017
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32. Local factors mediate the response of biodiversity to land use on two African mountains.
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Jung, M., Hill, S. L. L., Platts, P. J., Marchant, R., Siebert, S., Fournier, A., Munyekenye, F. B., Purvis, A., Burgess, N. D., and Newbold, T.
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BIODIVERSITY , *LAND use , *CONSERVATIONISTS , *ANTHROPOGENIC effects on nature , *POPULATION density - Abstract
Land-use change is the single biggest driver of biodiversity loss in the tropics. Biodiversity models can be useful tools to inform policymakers and conservationists of the likely response of species to anthropogenic pressures, including land-use change. However, such models generalize biodiversity responses across wide areas and many taxa, potentially missing important characteristics of particular sites or clades. Comparisons of biodiversity models with independently collected field data can help us understand the local factors that mediate broad-scale responses. We collected independent bird occurrence and abundance data along two elevational transects in Mount Kilimanjaro, Tanzania and the Taita Hills, Kenya. We estimated the local response to land use and compared our estimates with modelled local responses based on a large database of many different taxa across Africa. To identify the local factors mediating responses to land use, we compared environmental and species assemblage information between sites in the independent and African-wide datasets. Bird species richness and abundance responses to land use in the independent data followed similar trends as suggested by the African-wide biodiversity model, however the land-use classification was too coarse to capture fully the variability introduced by local agricultural management practices. A comparison of assemblage characteristics showed that the sites on Kilimanjaro and the Taita Hills had higher proportions of forest specialists in croplands compared to the Africa-wide average. Local human population density, forest cover and vegetation greenness also differed significantly between the independent and Africa-wide datasets. Biodiversity models including those variables performed better, particularly in croplands, but still could not accurately predict the magnitude of local species responses to most land uses, probably because local features of the land management are still missed. Overall, our study demonstrates that local factors mediate biodiversity responses to land use and cautions against applying biodiversity models to local contexts without prior knowledge of which factors are locally relevant. [ABSTRACT FROM AUTHOR]
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- 2017
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33. Prognostic Value of 18F-FDG PET/CT in a Large Cohort of Patients with Advanced Metastatic Neuroendocrine Neoplasms Treated with Peptide Receptor Radionuclide Therapy
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Christiane Schuchardt, Richard P. Baum, Jingjing Zhang, Harshad R. Kulkarni, Aviral Singh, Qingxing Liu, Precision Medicine, RS: GROW - R3 - Innovative Cancer Diagnostics & Therapy, and Radiotherapie
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medicine.medical_specialty ,Peptide receptor ,Rectum ,Gastroenterology ,030218 nuclear medicine & medical imaging ,F-18-FDG ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,medicine ,MANAGEMENT ,Radiology, Nuclear Medicine and imaging ,prognostic factor ,peptide receptor radionuclide therapy ,THERANOSTICS ,Lung ,neuroendocrine neoplasms ,business.industry ,Proportional hazards model ,EMISSION TOMOGRAPHY/COMPUTED TOMOGRAPHY ,Stomach ,MIDGUT ,Retrospective cohort study ,medicine.disease ,Primary tumor ,TUMORS ,Y-90 ,PREDICTS ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Radionuclide therapy ,SURVIVAL ,PRRT ,Lu-177 ,business ,FOLLOW-UP ,GA-68-DOTATATE PET/CT - Abstract
The objective of this retrospective study was to determine the role of F-18-FDG PET/CT in a large cohort of 495 patients with metastatic neuroendocrine neoplasms (NENs) who were treated with peptide receptor radionuclide therapy (PRRT) with a long-term follow-up. Methods: The 495 patients were treated with Lu-177- or Y-90-DOTATOC/DOTATATE PRRT between February 2002 and July 2018. All subjects received both Ga-68-DOTATOC/TATE/NOC and F-18-FDG PET/CT before treatment and were followed 3-189 mo. Kaplan-Meier analysis, log-rank testing (Mantel-Cox), and Cox regression analysis were performed for overall survival (OS) and progression-free survival (PFS). Results: One hundred ninety-nine patients (40.2%) presented with pancreatic NENs, 49 with cancer of unknown primary, and 139 with midgut NENs, whereas the primary tumor was present in the rectum in 20, in the lung in 38, in the stomach in 8, and in other locations in 42. F-18-FDG PET/CT was positive in 382 (77.2%) patients and negative in 113 (22.8%) before PRRT, whereas 100% were Ga-68-DOTATOC/TATE/NOC-positive. For all patients, the median PFS and OS, defined from the start of PRRT, were 19.6 mo and 58.7 mo, respectively. Positive F-18-FDG results predicted shorter PFS (18.5 mo vs. 24.1 mo; P = 0.0015) and OS (53.2 mo vs. 83.1 mo; P
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- 2020
34. Universal scaling laws rule explosive growth in human cancers
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Ángel Acosta Rojas, Esther Hernández-San Miguel, María Pérez-Cano, Gabriel F. Calvo, Lucía Zhu, Ana María García Vicente, Juan Belmonte-Beitia, Juan J. Jiménez, David Albillo, Philippe Schucht, Víctor M. Pérez-García, Pedro García-Gómez, Antonio Francisco Honguero Martínez, François M. Vallette, Manuel Valiente, Jesús J. Bosque, Álvaro Martínez, Julián Pérez-Beteta, David Molina-García, Youness Azimzade, Odelaisy León-Triana, Michael Murek, Pilar Sánchez-Gómez, Ana Ortiz de Mendivil, Rafael Hortigüela, Germán Andrés Jiménez Londoño, Estanislao Arana, Universidad de Castilla-La Mancha (UCLM), Spanish National Cancer Research Center (CNIO), Institute of Health Carlos III, University of Tehran, Sanchinarro University Hospita [HM Hospitales, Madrid], Apoptosis and Tumor Progression (CRCINA-ÉQUIPE 9), Centre de Recherche en Cancérologie et Immunologie Nantes-Angers (CRCINA), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Nantes - UFR de Médecine et des Techniques Médicales (UFR MEDECINE), Université de Nantes (UN)-Université de Nantes (UN)-Centre hospitalier universitaire de Nantes (CHU Nantes)-Centre National de la Recherche Scientifique (CNRS)-Université d'Angers (UA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Nantes - UFR de Médecine et des Techniques Médicales (UFR MEDECINE), Université de Nantes (UN)-Université de Nantes (UN)-Centre hospitalier universitaire de Nantes (CHU Nantes)-Centre National de la Recherche Scientifique (CNRS)-Université d'Angers (UA), Bern University Hospital [Berne] (Inselspital), MD Anderson Cancer Center [Madrid, Spain], Hospital General Universitario de Albacete, Hospital General Universitario de Ciudad Real [Ciudad Real, Spain], Fundación Instituto Valenciano de Oncología [Valencia, Spain], James S. McDonnell Foundation 21st Century Science Initiative in Mathematical and Complex Systems Approaches for Brain Cancer, European Regional Development Fund (ERDF/FEDER), Junta de Comunidades de Castilla-La Mancha, Ministerio de Economia y Competividad (MINECO), Bristol-Myers Squibb, Beug Foundation's Prize for Metastasis Research 2017, Fundacion Ramon Areces, Worldwide Cancer Research, H2020-FETOPEN, Fundacio La Marato de TV3, Clinic and Laboratory Integration Program CRI Award 2018, AECC Coordinated Translational Groups 2017, LAB AECC 2019, La Caixa INPhINIT Fellowship, La Caixa-Severo Ochoa International PhD Program Fellowship, European Molecular Biology Organization Young Investigators programme, Bernardo, Elizabeth, Universidad de Castilla-La Mancha = University of Castilla-La Mancha (UCLM), and Université d'Angers (UA)-Université de Nantes (UN)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Centre hospitalier universitaire de Nantes (CHU Nantes)-Université d'Angers (UA)-Université de Nantes (UN)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Centre hospitalier universitaire de Nantes (CHU Nantes)
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Scaling law ,Explosive material ,Computer science ,General Physics and Astronomy ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,01 natural sciences ,Measure (mathematics) ,Article ,010305 fluids & plasmas ,[SDV.CAN] Life Sciences [q-bio]/Cancer ,GENERAL-MODEL ,0103 physical sciences ,RATES ,Statistical physics ,Tissues and Organs (q-bio.TO) ,010306 general physics ,Set (psychology) ,Evolutionary dynamics ,Mathematical model ,TUMOR-GROWTH ,Quantitative Biology - Tissues and Organs ,Observable ,EVOLUTION ,PREDICTS ,3. Good health ,PET ,Oncología matemática ,FOS: Biological sciences ,SURVIVAL ,Biomedicina ,Value (mathematics) - Abstract
Most physical and other natural systems are complex entities composed of a large number of interacting individual elements. It is a surprising fact that they often obey the so-called scaling laws relating an observable quantity with a measure of the size of the system. Here we describe the discovery of universal superlinear metabolic scaling laws in human cancers. This dependence underpins increasing tumour aggressiveness, due to evolutionary dynamics, which leads to an explosive growth as the disease progresses. We validated this dynamic using longitudinal volumetric data of different histologies from large cohorts of cancer patients. To explain our observations we put forward increasingly-complex biologically-inspired mathematical models that captured the key processes governing tumor growth. Our models predicted that the emergence of superlinear allometric scaling laws is an inherently three-dimensional phenomenon. Moreover, the scaling laws thereby identified allowed us to define a set of metabolic metrics with prognostic value, thus providing added clinical utility to the base findings. This research has been supported by the James S. McDonnell Foundation 21st Century Science Initiative in Mathematical and Complex Systems Approaches for Brain Cancer (collaborative awards 220020560 and 220020450), Ministerio de Economia y Competitividad/FEDER, Spain (grant no. MTM2015-71200-R), Junta de Comunidades de Castilla-La Mancha (grant no. SBPLY/17/180501/000154). Research in the Brain Metastasis Group is supported by MINECO grant MINECO-Retos SAF2017-89643-R (M.V.), Bristol-Myers Squibb Melanoma Research Alliance Young Investigator Award 2017 (498103) (M.V.), Beug Foundation's Prize for Metastasis Research 2017 (M.V.), Fundacion Ramon Areces (CIVP19S8163) (M.V.), Worldwide Cancer Research (19-0177) (M.V.), H2020-FETOPEN (828972) (M.V.), Fundacio La Marato de tv3 (141), Clinic and Laboratory Integration Program CRI Award 2018 (54545) (M.V.), AECC Coordinated Translational Groups 2017 (GCTRA16015SEOA) (M.V.), LAB AECC 2019 (LABAE19002VALI) (M.V.), La Caixa INPhINIT Fellowship (LCF/BQ/IN17/11620028) (P.G.-G.), La Caixa-Severo Ochoa International PhD Program Fellowship (LCF/BQ/SO16/52270014) (L.Z.). M.V. is a member of the European Molecular Biology Organization Young Investigators programme (4053). We would like to acknowledge J. Cervera and J. C. Penalver from the IVO Foundation (Valencia, Spain). No
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- 2020
35. Reliability and accuracy of EEG interpretation for estimating age in preterm infants
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Anna Kaminska, Nathan J. Stevenson, James A. Roberts, Elke Griesmaier, Sampsa Vanhatalo, Robert R. Clancy, Maria-Luisa Tataranno, Elena Pavlidis, Katrin Klebermass-Schrehof, HUS Medical Imaging Center, Kliinisen neurofysiologian yksikkö, Clinicum, Department of Neurosciences, Children's Hospital, Helsinki University Hospital Area, HUS Children and Adolescents, Neuroscience Center, and Helsinki Institute of Life Science HiLIFE
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0301 basic medicine ,Systematic error ,medicine.medical_specialty ,Visual interpretation ,Intraclass correlation ,FEATURES ,Neurosciences. Biological psychiatry. Neuropsychiatry ,Gestational Age ,Audiology ,Electroencephalography ,Machine Learning ,03 medical and health sciences ,Functional brain ,0302 clinical medicine ,Predictive Value of Tests ,Error analysis ,SEIZURE DETECTION ,medicine ,Humans ,Diagnosis, Computer-Assisted ,RC346-429 ,Research Articles ,Reliability (statistics) ,Brain Diseases ,AMPLITUDE-INTEGRATED EEG ,medicine.diagnostic_test ,business.industry ,General Neuroscience ,3112 Neurosciences ,Infant, Newborn ,Brain ,Reproducibility of Results ,PREDICTS ,PROGNOSTIC VALUE ,PATTERN ,030104 developmental biology ,AGREEMENT ,Maturity assessment ,BRAIN MATURATION ,Neurology. Diseases of the nervous system ,Neurology (clinical) ,Neonatology ,business ,Infant, Premature ,030217 neurology & neurosurgery ,RC321-571 ,Research Article - Abstract
Objectives: To determine the accuracy of, and agreement among, EEG and aEEG readers' estimation of maturity and a novel computational measure of functional brain age (FBA) in preterm infants. Methods: Seven experts estimated the postmenstrual ages (PMA) in a cohort of recordings from preterm infants using cloud-based review software. The FBA was calculated using a machine learning-based algorithm. Error analysis was used to determine the accuracy of PMA assessments and intraclass correlation (ICC) was used to assess agreement between experts. Results: EEG recordings from a PMA range 25 to 38 weeks were successfully interpreted. In 179 recordings from 62 infants interpreted by all human readers, there was moderate agreement between experts (aEEG ICC = 0.724; 95%CI:0.658-0.781 and EEG ICC = 0.517; 95%CI:0.311-0.664). In 149 recordings from 61 infants interpreted by all human readers and the FBA algorithm, random and systematic errors in visual interpretation of PMA were significantly higher than the computational FBA estimate. Tracking of maturation in individual infants showed stable FBA trajectories, but the trajectories of the experts' PMA estimate were more likely to be obscured by random errors. The accuracy of visual interpretation of PMA estimation was compromised by neurodevelopmental outcome for both aEEG and EEG review. Interpretation: Visual assessment of infant maturity is possible from the EEG or aEEG, with an average of human experts providing the highest accuracy. Tracking PMA of individual infants was hampered by errors in experts' estimates. FBA provided the most accurate maturity assessment and has potential as a biomarker of early outcome.
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- 2020
36. Biological tumor markers associated with local control after primary radiotherapy in laryngeal cancer
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Johannes A. Langendijk, Ed Schuuring, Bernard F. A. M. van der Laan, Emiel Kop, Geertruida H. de Bock, Maartje G. Noordhuis, and Bert van der Vegt
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Oncology ,FACTOR RECEPTOR EXPRESSION ,medicine.medical_specialty ,medicine.medical_treatment ,BCL-2 ,PROTEIN ,Cochrane Library ,03 medical and health sciences ,0302 clinical medicine ,Quality of life ,Internal medicine ,PROGNOSTIC-SIGNIFICANCE ,medicine ,Biomarkers, Tumor ,KI-67 ,Humans ,FAILURE ,Clinical significance ,030223 otorhinolaryngology ,RECURRENCE ,radiotherapy ,P53 ,biology ,business.industry ,Cancer ,biomarkers ,Original Articles ,Laryngeal Neoplasm ,medicine.disease ,Survival Analysis ,PREDICTS ,Radiation therapy ,laryngeal Neoplasms ,Systematic review ,Otorhinolaryngology ,cell Proliferation ,030220 oncology & carcinogenesis ,Ki-67 ,biology.protein ,treatment outcome ,Original Article ,prognosis ,SQUAMOUS-CELL CARCINOMA ,business - Abstract
Background The choice of treatment in laryngeal cancer is mainly based on tumor stage, post-treatment morbidity and quality of life. Biological tumor markers might also be of potential clinical relevance. Objective of the review The aim was to systematically review the value of published biological tumor markers to predict local control in laryngeal cancer patients treated with definitive radiotherapy. Type of review Systematic review. Search strategy PubMed, Embase, Cochrane Library. Evaluation method A literature search was performed using multiple terms for laryngeal cancer, radiotherapy, biological markers, detection methods and local control or survival. Studies regarding the relation between biological tumor markers and local control or survival in laryngeal cancer patients primarily treated with radiotherapy were included. Markers were clustered on biological function. Quality of all studies was assessed. Study selection, data extraction and quality assessment was performed by two independent reviewers. Results A total of 52 studies out of 618 manuscripts, concerning 118 markers, were included. EGFR and P53 showed consistent evidence for not being predictive of local control after primary radiotherapy, whereas proliferation markers (ie high Ki-67 expression) showed some, but no consistent, evidence for being predictive of better local control. Other clusters of markers (markers involved in angiogenesis and hypoxia, apoptosis markers, cell cycle, COX-2 and DNA characteristics) showed no consistent evidence towards being predictors of local control after primary radiotherapy. Conclusions Cell proliferation could be of potential interest for predicting local control after primary radiotherapy in laryngeal cancer patients, whereas EGFR and p53 are not predictive in contrast to some previous analyses. Large diversity in research methods is found between studies, which results in contradictory outcomes. Future studies need to be more standardised and well described according to the REMARK criteria in order to have better insight into which biomarkers can be used as predictors of local control after primary radiotherapy.
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- 2020
37. Biological tumor markers associated with local control after primary radiotherapy in laryngeal cancer
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FACTOR RECEPTOR EXPRESSION ,P53 ,biomarkers ,BCL-2 ,PROTEIN ,PREDICTS ,laryngeal Neoplasms ,cell Proliferation ,PROGNOSTIC-SIGNIFICANCE ,treatment outcome ,KI-67 ,FAILURE ,prognosis ,SQUAMOUS-CELL CARCINOMA ,RECURRENCE ,radiotherapy - Abstract
Background The choice of treatment in laryngeal cancer is mainly based on tumor stage, post-treatment morbidity and quality of life. Biological tumor markers might also be of potential clinical relevance.Objective of the review The aim was to systematically review the value of published biological tumor markers to predict local control in laryngeal cancer patients treated with definitive radiotherapy.Type of Review Systematic review.Search strategy PubMed, Embase, Cochrane Library.Evaluation Method A literature search was performed using multiple terms for laryngeal cancer, radiotherapy, biological markers, detection methods and local control or survival. Studies regarding the relation between biological tumor markers and local control or survival in laryngeal cancer patients primarily treated with radiotherapy were included. Markers were clustered on biological function. Quality of all studies was assessed. Study selection, data extraction and quality assessment was performed by two independent reviewers.Results A total of 52 studies out of 618 manuscripts, concerning 118 markers, were included. EGFR and P53 showed consistent evidence for not being predictive of local control after primary radiotherapy, whereas proliferation markers (ie high Ki-67 expression) showed some, but no consistent, evidence for being predictive of better local control. Other clusters of markers (markers involved in angiogenesis and hypoxia, apoptosis markers, cell cycle, COX-2 and DNA characteristics) showed no consistent evidence towards being predictors of local control after primary radiotherapy.Conclusions Cell proliferation could be of potential interest for predicting local control after primary radiotherapy in laryngeal cancer patients, whereas EGFR and p53 are not predictive in contrast to some previous analyses. Large diversity in research methods is found between studies, which results in contradictory outcomes. Future studies need to be more standardised and well described according to the REMARK criteria in order to have better insight into which biomarkers can be used as predictors of local control after primary radiotherapy.
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- 2020
38. Dichotomy between the transcriptomic landscape of naturally versus accelerated aged murine hearts
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Monika Stoll, Anne-Sophie Armand, Leon J. De Windt, Thomas Thum, Martine de Boer, Federica De Majo, Blanche Schroen, Jana-Charlotte Hegenbarth, Dirk J. Duncker, Frank Rühle, Christian Bär, RS: FSE DMG, Cardiologie, RS: Carim - H05 Gene regulation, RS: Carim - H02 Cardiomyopathy, Biochemie, RS: FHML MaCSBio, RS: Carim - B01 Blood proteins & engineering, Cardiology, Maastricht University [Maastricht], Institute of Molecular Biology (IMB), Johannes Gutenberg - Universität Mainz (JGU), University Hospital Münster - Universitaetsklinikum Muenster [Germany] (UKM), Hannover Medical School [Hannover] (MHH), Erasmus University Medical Center [Rotterdam] (Erasmus MC), Institut Necker Enfants-Malades (INEM - UM 111 (UMR 8253 / U1151)), Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université de Paris (UP), T.T. was supported by ERC Consolidator Grant LONGHEART, by ERA-CVD JCT2016 EXPERT and the DFG (TH903/22-1). C.B. was supported by the DFG (BA5631/2–1) and ERA-CVD JCT2016 EXPERT. D.J.D. acknowledges support from the Netherlands CardioVascular Research Initiative: the Dutch Heart Foundation, Dutch Federation of University Medical Centers, ZonMW and the Royal Netherlands Academy of Sciences (CVON2011-ARENA and CVON2017-ARENA PRIME). A.S.A. was funded by Association Française contres les Myopathies (AFM 18802) L.D.W. and F.D.M. are supported by ERA-CVD JCT2016 EXPERT. L.D.W. acknowledges support from the Netherlands CardioVascular Research Initiative: the Dutch Heart Foundation, Dutch Federation of University Medical Centers, ZonMW and the Royal Netherlands Academy of Sciences (CVON2017-ARENA PRIME). L.D.W. was further supported by ERC Consolidator Grant 311549 CALMIRS and a VICI award 918-156-47 from NWO. B.S. is supported by VIDI award 917.14.363 from NWO, Dekker grant 2014T105 from the Dutch Heart Foundation, further support comes from the Netherlands CardioVascular Research Initiative: the Dutch Heart Foundation, Dutch Federation of University Medical Centers, ZonMW and the Royal Netherlands Academy of Sciences (CVON2018 SHE-PREDICTS-HF), and a grant by the Health Foundation Limburg., Johannes Gutenberg - Universität Mainz = Johannes Gutenberg University (JGU), Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), and Bodescot, Myriam
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0301 basic medicine ,Male ,Aging ,lcsh:Medicine ,030204 cardiovascular system & hematology ,Gene regulatory networks ,Transcriptome ,Mice ,0302 clinical medicine ,FAILURE ,LONGEVITY ,lcsh:Science ,MUTATION ,Telomere Shortening ,Multidisciplinary ,Aging, Premature ,Heart ,Telomere ,CANCER ,Cell biology ,Mitochondria ,PREDICTS ,Antioxidant capacity ,[SDV.BBM.GTP] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN] ,Female ,NUCLEAR ABNORMALITIES ,Senescence ,Premature aging ,EXPRESSION ,DNA repair ,Biology ,Article ,Cardiac dysfunction ,MECHANISMS ,03 medical and health sciences ,[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN] ,Animals ,Humans ,Transcriptomics ,Gene ,Myocardium ,lcsh:R ,Proteins ,030104 developmental biology ,DNA-DAMAGE ,TELOMERE LENGTH ,lcsh:Q ,Ichthyosis, Lamellar - Abstract
We investigated the transcriptomic landscape of the murine myocardium along the course of natural aging and in three distinct mouse models of premature aging with established aging-related cardiac dysfunction. Genome-wide total RNA-seq was performed and the expression patterns of protein-coding genes and non-coding RNAs were compared between hearts from naturally aging mice, mice with cardiac-specific deficiency of a component of the DNA repair machinery, mice with reduced mitochondrial antioxidant capacity and mice with reduced telomere length. Our results demonstrate that no dramatic changes are evident in the transcriptomes of naturally senescent murine hearts until two years of age, in contrast to the transcriptome of accelerated aged mice. Additionally, these mice displayed model-specific alterations of the expression levels of protein-coding and non-coding genes with hardly any overlap with age-related signatures. Our data demonstrate very limited similarities between the transcriptomes of all our murine aging models and question their reliability to study human cardiovascular senescence.
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- 2020
39. Release of data added to the PREDICTS database (November 2022)
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Contu, Sara, De Palma, Adriana, Bates, Rachel, Borer, Jessica, Espinoza De Janon, Felipe, Gao, Di, Harvey, Lorna, Huang, Xiao, Jung, Martin, Maney, Calum, Needler, Gabrielle, Suryometaram, Sasha, Yao, Yujun, Zhang, Hanbin, Albercht, Harald, Almazán-Núñez, Roberto Carlos, Alvarez Alvarez, Edson A., Anitha, K., Barnes, Andrew D., Barzan, Flavia Romina, Baudron, Frederic, Becker, Rafael, Bogyó, David, Bone, James, Bos, Merijn M., Bouam, Idriss, Bravo-Monroy, Liliana, Brown, Keiron, Cabral, Hugo, Calcaterra, Luis, Carpenter, Dan, Carrascal, Luis M., Chiawo, David, Coetzee, Bernard, Connelly, Heather, Cusser, Sarah, da Silva, Luis, Dallimer, Martin, Davies, Stephen, De Smedt, Pallieter, Edwards, David, Eggleton, Paul, Farahat, Emad, Farrell, Mark, Flinn, Kathryn, Forrest, Jessica, Gardner, Charlie, Gardner, Toby, Geoffroy, Jean-Jacques, Gove, Aaron, Guillemot, Joannès, Hendrix, Stephen, Horváth, Roland, Hvenegaard, Glen, Irwin, Sandra, Jackson, Michelle, Jalilova, Gulnaz, Jha, Shalene, Jianghong, Ran, Jones, David T, Kajtoch, Lukasz, Kambach, Stephan, Kamp, Johannes, Karp, Daniel, Kazerani, Farzane, Kessler, Michael, Kitazawa, Munehiro, Knoll, Fátima do Rosário Naschenveng, Kone, Mouhamadou, Kosewska, Agnieszka, Kremen, Claire, Kutt, Alex S, Lacasella, Federica, Lange, Markus, Lees, David, Lei, Fumin, Leong, Misha, Leso, Peter, López Ricaurte, Lina, Magura, Tibor, Mandle, Lisa, Marinaro, Sofía, Martin, Dominic, Massawe, Apia, Minor, Maria, Mir, Aabid Hussain, Mohandass, D., Morgado, Rui, Mulder, Christian, Murvanidze, Maka, Nascimento, Marcelo, Nielsen, Martin Reinhardt, Özden, Özge, Pall, José Luis María, Palomino, David, Philippe, Vaast, Piovesan, Gianluca, Ponge, Jean-François, Sreekar, Rachakonda, Raman, T. R. Shankar, Rengaian, Ganesan, Rolim, Samir, Sahoo, Uttam Kumar, Salmon, Sandrin, Sambuichi, Regina Helena Rosa, Schmiedel, Ute, Schmitt, Christine B, Schmitt, Christine, Selwyn, Mark Arthur, Shahabuddin, Saleh, Sharma, Neeraj, Sofia, Silvia Helena, Soga, Masashi, Song, Gang, Suarez, Andrew V., Suarez-Rubio, Marcela, Sunil, Chikkahuchaiah, Taboada, Angela, Tanalgo, Krizler C., Tóthmérész, Béla, Van Bael, Sunshine, Vanbergen, Adam, Van Vu, Lien, Weideman, Eleanor, Williams, Neal, Wuyts, Karen, Xue, Chen, Yan, Xiaoli, Yongjie, Wu, Zhang, Taxing, Brummitt, Neil, Burton, Victoria, Hill, Samantha L.L., Hudson, Lawrence, Humphries, Josh, Newbold, Tim, Phillips, Helen, Sanchez-Ortiz, Katia, Tobias, Joseph, Vincent, Sarah, Walkden, Patrick, Weeks, Tom, Woodburn, Matt, and Purvis, Andy
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terrestrial biodiversity ,land cover ,predicts ,land use ,global biodiversity ,global change ,biodiversity - Abstract
This dataset comprises 1,040,752 measurements, collated from 9,544 sampling locations in 46 countries and representing 10,635 species. The data was collated from 115 existing spatial comparisons of local-scale biodiversity exposed to different intensities and types of anthropogenic pressures, from terrestrial sites around the world. The database was assembled as part of the PREDICTS project - Projecting Responses of Ecological Diversity In Changing Terrestrial Systems; https://www.nhm.ac.uk/our-science/our-work/biodiversity/predicts.html This release is an addition to the data presented with The 2016 release of the PREDICTS database (available on the NHM Data Portal: https://data.nhm.ac.uk/dataset/the-2016-release-of-the-predicts-database).
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- 2022
- Full Text
- View/download PDF
40. Cardiac software repeatability beyond correlations:Clinical outcomes matter
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Hendrik J. Harms and Mark Lubberink
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RISK ,TOOLS ,medicine.medical_specialty ,STRESS ,MYOCARDIAL BLOOD-FLOW ,business.industry ,MEDLINE ,Repeatability ,QUANTIFICATION ,PREDICTS ,Software ,Medicine ,Radiology, Nuclear Medicine and imaging ,Medical physics ,Cardiology and Cardiovascular Medicine ,business - Published
- 2021
41. A Five-MicroRNA Signature Predicts the Prognosis in Nasopharyngeal Carcinoma
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Shi-xiong Wu, Jing Xie, Shuang Li, Shuo Huang, and Cen Zhang
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Oncology ,Cancer Research ,medicine.medical_specialty ,Framingham Risk Score ,Receiver operating characteristic ,microRNA ,business.industry ,predicts ,nasopharyngeal carcinoma ,chemotherapy response ,Area under the curve ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Nomogram ,medicine.disease ,Nasopharyngeal carcinoma ,Lasso (statistics) ,Internal medicine ,Cohort ,Principal component analysis ,medicine ,prognosis ,business ,RC254-282 ,Original Research - Abstract
BackgroundThere is no effective prognostic signature that could predict the prognosis of nasopharyngeal carcinoma (NPC).MethodsWe constructed a prognostic signature based on five microRNAs using random forest and Least Absolute Shrinkage And Selection Operator (LASSO) algorithm on the GSE32960 cohort (N = 213). We verified its prognostic value using three independent external validation cohorts (GSE36682, N = 62; GSE70970, N = 246; and TCGA-HNSC, N = 523). Through principal component analysis, receiver operating characteristic curve analysis, and C-index calculation, we confirmed the predictive accuracy of this prognostic signature.ResultsWe calculated the risk score based on the LASSO algorithm and divided the patients into high- and low-risk groups according to the calculated optimal cutoff value. The patients in the high-risk group tended to have a worse prognosis outcome and chemotherapy response. The time-dependent receiver operating characteristic curve showed that the 1-year overall survival rate of the five-microRNA signature had an area under the curve of more than 0.83. A functional annotation analysis of the five-microRNA signature showed that the patients in the high-risk group were usually accompanied by activation of DNA repair and MYC-target pathways, while the patients in the low-risk group had higher immune-related pathway signals.ConclusionsWe constructed a five-microRNA prognostic signature, which could accurately predict the prognosis of nasopharyngeal carcinoma, and constructed a nomogram that could conveniently predict the overall survival of patients.
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- 2021
42. Landscape context and dispersal ability as determinants of population genetic structure in freshwater fishes
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Shelley, JJ, Holland, Owen, Swearer, SE, Dempster, T, Le Feuvre, MC, Sherman, Craig, Miller, Adam, Shelley, JJ, Holland, Owen, Swearer, SE, Dempster, T, Le Feuvre, MC, Sherman, Craig, and Miller, Adam
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- 2021
43. Heart Size Corrected Electrical Dyssynchrony and Its Impact on Sex-Specific Response to Cardiac Resynchronization Therapy
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Salden, Odette A. E., Salden, Odette A. E., van Stipdonk, Antonius M. W., den Ruijter, Hester M., Cramer, Maarten Jan, Kloosterman, Marielle, Rienstra, Michiel, Maass, Alexander H., Prinzen, Frits W., Vernooy, Kevin, Meine, Mathias, Salden, Odette A. E., Salden, Odette A. E., van Stipdonk, Antonius M. W., den Ruijter, Hester M., Cramer, Maarten Jan, Kloosterman, Marielle, Rienstra, Michiel, Maass, Alexander H., Prinzen, Frits W., Vernooy, Kevin, and Meine, Mathias
- Abstract
Background:Women are less likely to receive cardiac resynchronization therapy, yet, they are more responsive to the therapy and respond at shorter QRS duration. The present study hypothesized that a relatively larger left ventricular (LV) electrical dyssynchrony in smaller hearts contributes to the better cardiac resynchronization therapy response in women. For this, the vectorcardiography-derived QRS area is used, since it allows for a more detailed quantification of electrical dyssynchrony compared with conventional electrocardiographic markers.Methods:Data from a multicenter registry of 725 cardiac resynchronization therapy patients (median follow-up, 4.2 years [interquartile range, 2.7-6.1]) were analyzed. Baseline electrical dyssynchrony was evaluated using the QRS area and the corrected QRS area for heart size using the LV end-diastolic volume (QRSarea/LVEDV). Impact of the QRSarea/LVEDV ratio on the association between sex and LV reverse remodeling (LV end-systolic volume change) and sex and the composite outcome of all-cause mortality, LV assist device implantation, or heart transplantation was assessed.Results:At baseline, women (n=228) displayed larger electrical dyssynchrony than men (QRS area, 132 +/- 55 versus 123 +/- 58 mu Vs; P=0.043), which was even more pronounced for the QRSarea/LVEDV ratio (0.76 +/- 0.46 versus 0.57 +/- 0.34 mu Vs/mL; PConclusions:Greater electrical dyssynchrony in smaller hearts contributes, in part, to more reverse remodeling observed in women after cardiac resynchronization therapy, but this does not explain their better long-term outcomes.
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- 2021
44. Exploring potential serum levels of Homocysteine, interleukin-1 beta, and apolipoprotein B 48 as new biomarkers for patients with ischemic stroke
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Alireza Nourazarian, Masoud Nikanfar, Vahidreza Karamad, Behrouz Shademan, and Delara Laghousi
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Microbiology (medical) ,Apolipoprotein B-48 ,medicine.medical_specialty ,Predicts ,Homocysteine ,Clinical Biochemistry ,Risk-Factor ,interleukin-1 beta ,Gastroenterology ,Body Mass Index ,ischemic Stroke ,chemistry.chemical_compound ,interleukin‐1β ,Internal medicine ,medicine ,Immunology and Allergy ,Body-Mass Index ,Stroke ,apolipoprotein B 48 ,Research Articles ,Cause of death ,Markers ,business.industry ,Prevention ,Biochemistry (medical) ,Public Health, Environmental and Occupational Health ,Area under the curve ,Hematology ,Cerebral Infarction ,medicine.disease ,Pathophysiology ,Medical Laboratory Technology ,C-Reactive Protein ,Cholesterol ,chemistry ,Ischemic stroke ,Deficiency ,Cytokines ,business ,Body mass index ,Research Article - Abstract
Background: Stroke is the second leading cause of death worldwide with heterogeneous characteristics. The subtypes of stroke are due to different pathophysiological regulations and causes. This study aimed to investigate the correlation of serum levels of apolipoprotein B 48, interleukin-1 beta and Homocysteine with BMI in patients with ischemic stroke (IS). Methods: Over one hundred controls (120) and an equal number of IS patients, including 31 women and 89 men, were recruited to participate in the case-control study conducted at Imam Reza Hospital (Tabriz, Iran) from February 2019 to March 2020. We measured serum levels of apolipoprotein B 48, interleukin-1 beta, and Homocysteine. Receiver operating characteristic analysis (ROC) was performed to evaluate the diagnostic value of these indices in patients and control groups. Results: The mean serum levels of apolipoprotein B 48, interleukin-1 beta, and Homocysteine, were significantly increased in the experimental group compared to the control group with a p-value of 0.001. The ROC curve analysis showed that the area under the curve for apo B48, IL-1 beta, hs-CRP, and Homocysteine serum levels were 0.94, 0.98, 0.99, and 1, respectively. Conclusions: The results of our current study show that the determination of serum levels of apolipoprotein B 48, interleukin-1 beta, and Homocysteine can potentially be used to monitor and diagnose IS patients. However, there was no statistically significant correlation between serum levels of apolipoprotein B 48, interleukin 1 beta and Homocysteine and BMI in the patient group. However, there was a statistically significant inverse correlation between serum levels of high-sensitivity C-reactive protein (hs-CRP) and BMI in the patient group., Research Vice-Chancellor of Tabriz University of medical sciences, Tabriz, IRAN [25992], The present study was supported by grants from the Research Vice-Chancellor of Tabriz University of medical sciences, Tabriz, IRAN grant no. 25992.
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- 2021
45. Prognostic Score and Cytogenetic Risk Classification for Chronic Lymphocytic Leukemia Patients: Center for International Blood and Marrow Transplant Research Report
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Ronald Sobecks, Melhem Solh, Baldeep Wirk, Joseph P. McGuirk, Zhen-Huan Hu, Kwang Woo Ahn, Yoshihiro Inamoto, Edward Agura, Ulrike Bacher, Miguel-Angel Perales, Usama Gergis, Harry C. Schouten, Joseph Pidala, Amer Beitinjaneh, Amelia Langston, Ran Reshef, Mohamed A. Kharfan-Dabaja, Robert S. Negrin, Saurabh Chhabra, David I. Marks, Virginia O. Volpe, Nilanjan Ghosh, Asad Bashey, Jennifer R. Brown, William J. Hogan, Ayman Saad, Wael Saber, Tamila L. Kindwall-Keller, Minoo Battiwalla, Brian T. Hill, Jan Cerny, Uday R. Popat, Oliver W. Press, Hillard M. Lazarus, Sid Ganguly, Jayesh Mehta, Attaphol Pawarode, Nakhle S. Saba, Taiga Nishihori, Edward A. Copelan, Jean A. Yared, Edwin P. Alyea, Jean-Yves Cahn, Steven M. Devine, Mazyar Shadman, Mahmoud Aljurf, Haesook T. Kim, Mohamed L. Sorror, Michael R. Grunwald, Robert Peter Gale, Richard F. Olsson, Richard A. Nash, Joseph H. Antin, Mehdi Hamadani, Stephen J. Forman, Gregory A. Hale, Bipin N. Savani, Matthew S. Davids, Sunita Nathan, Sergio Giralt, Joseph P. Uberti, Gerhard C. Hildebrandt, RS: GROW - R3 - Innovative Cancer Diagnostics & Therapy, MUMC+: MA Hematologie (9), and Interne Geneeskunde
- Subjects
Male ,Oncology ,Cancer Research ,Transplantation Conditioning ,Chronic lymphocytic leukemia ,medicine.medical_treatment ,Comorbidity ,Hematopoietic stem cell transplantation ,Leukocyte Count ,0302 clinical medicine ,immune system diseases ,hemic and lymphatic diseases ,610 Medicine & health ,Aged, 80 and over ,Hematology ,Hematopoietic Stem Cell Transplantation ,Middle Aged ,Prognosis ,PREDICTS ,Leukemia ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,SURVIVAL ,Female ,Adult ,medicine.medical_specialty ,Risk Assessment ,Article ,Young Adult ,03 medical and health sciences ,Internal medicine ,White blood cell ,medicine ,Humans ,Transplantation, Homologous ,Survival analysis ,Aged ,Chromosome Aberrations ,business.industry ,STEM-CELL TRANSPLANTATION ,medicine.disease ,Leukemia, Lymphocytic, Chronic, B-Cell ,Survival Analysis ,MODEL ,Transplantation ,FOLLOW-UP ,business ,Biomarkers ,CLL ,030215 immunology - Abstract
Purpose: To develop a prognostic model and cytogenetic risk classification for previously treated patients with chronic lymphocytic leukemia (CLL) undergoing reduced intensity conditioning (RIC) allogeneic hematopoietic cell transplantation (HCT). Experimental Design: We performed a retrospective analysis of outcomes of 606 patients with CLL who underwent RIC allogeneic HCT between 2008 and 2014 reported to the Center for International Blood and Marrow Transplant Research. Results: On the basis of multivariable models, disease status, comorbidity index, lymphocyte count, and white blood cell count at HCT were selected for the development of prognostic model. Using the prognostic score, we stratified patients into low-, intermediate-, high-, and very-high-risk [4-year progression-free survival (PFS) 58%, 42%, 33%, and 25%, respectively, P < 0.0001; 4-year overall survival (OS) 70%, 57%, 54%, and 38%, respectively, P < 0.0001]. We also evaluated karyotypic abnormalities together with del(17p) and found that del(17p) or ≥5 abnormalities showed inferior PFS. Using a multivariable model, we classified cytogenetic risk into low, intermediate, and high (P < 0.0001). When the prognostic score and cytogenetic risk were combined, patients with low prognostic score and low cytogenetic risk had prolonged PFS (61% at 4 years) and OS (75% at 4 years). Conclusions: In this large cohort of patients with previously treated CLL who underwent RIC HCT, we developed a robust prognostic scoring system of HCT outcomes and a novel cytogenetic-based risk stratification system. These prognostic models can be used for counseling patients, comparing data across studies, and providing a benchmark for future interventions. For future study, we will further validate these models for patients receiving targeted therapies prior to HCT.
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- 2019
46. Exploring a 1-Minute Paced Deep-Breathing Measurement of Heart Rate Variability as Part of a Workers' Health Assessment
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Frits G. J. Oosterveld, Remko Soer, André Bieleman, Michiel F. Reneman, Douglas P. Gross, Rollin McCraty, Marianne W. M. C. Six Dijkstra, and Extremities Pain and Disability (EXPAND)
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Male ,IMPACT ,Health Status ,Blood Pressure ,AUTONOMIC IMBALANCE ,Body Mass Index ,0302 clinical medicine ,Heart Rate ,Surveys and Questionnaires ,Heart rate variability ,Applied Psychology ,Workers ,Netherlands ,RISK ,05 social sciences ,ENGAGEMENT ,PREDICTS ,Health psychology ,Neuropsychology and Physiological Psychology ,CARDIOVASCULAR-DISEASE ,Workforce ,Screening ,Female ,Adult ,Employment ,medicine.medical_specialty ,Waist ,Age adjustment ,QUESTIONNAIRE ,INDUSTRY ,Article ,050105 experimental psychology ,03 medical and health sciences ,Respiratory Rate ,Heart rate ,Diagnostic techniques and procedures ,medicine ,Humans ,0501 psychology and cognitive sciences ,Exercise ,Diagnostic Tests, Routine ,business.industry ,Public health ,PERFORMANCE ,medicine.disease ,Obesity ,Cross-Sectional Studies ,Blood pressure ,Physical therapy ,ABILITY INDEX ,business ,030217 neurology & neurosurgery - Abstract
Low heart rate variability (HRV) is related to health problems that are known reasons for sick-leave or early retirement. A 1-minute-protocol could allow large scale HRV measurement for screening of health problems and, potentially, sustained employability. Our objectives were to explore the association of HRV with measures of health. Cross-sectional design with 877 Dutch employees assessed during a Workers’ Health Assessment. Personal and job characteristics, workability, psychological and mental problems, and lifestyle were measured with questionnaires. Biometry was measured (BMI, waist circumference, blood pressure, glucose, cholesterol). HRV was assessed with a 1-minute paced deep-breathing protocol and expressed as mean heart rate range (MHRR). A low MHRR indicates a higher health risk. Groups were classified age adjusted for HRV and compared. Spearman correlations between raw MHRR and the other measures were calculated. Significant univariable correlations (p < 0.05) were entered in a linear regression model to explore the multivariable association with MHRR. Age, years of employment, BMI and waist circumference differed significantly between HRV groups. Significant correlations were found between MHRR and age, workability, BMI, waist circumference, cholesterol, systolic and diastolic blood-pressure and reported physical activity and alcohol consumption. In the multivariable analyses 21.1% of variance was explained: a low HRV correlates with aging, higher BMI and higher levels of reported physically activity. HRV was significantly associated with age, measures of obesity (BMI, waist circumference), and with reported physical activity, which provides a first glance of the utility of a 1-minute paced deep-breathing HRV protocol as part of a comprehensive preventive Workers’ Health Assessment.Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creat ivecommons .org/licen ses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate redit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
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- 2019
47. MR4 sustained for 12 months is associated with stable deep molecular responses in chronic myeloid leukemia
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Jane F. Apperley, Georgios Nteliopoulos, Dragana Milojkovic, Simone Claudiani, George Nesr, Letizia Foroni, Adi Shacham Abulafia, Richard Szydlo, Jamshid S. Khorashad, Renuka Palanicawandar, and Aoife Gatenby
- Subjects
Male ,Transcription, Genetic ,Fusion Proteins, bcr-abl ,Kaplan-Meier Estimate ,GUIDELINES ,0302 clinical medicine ,Antineoplastic Combined Chemotherapy Protocols ,INTERIM ANALYSIS ,1102 Cardiorespiratory Medicine and Haematology ,Aged, 80 and over ,OUTCOMES ,Cytogenetics and Molecular Genetics ,CHRONIC MYELOGENOUS LEUKEMIA ,Myeloid leukemia ,Hematology ,Middle Aged ,Prognosis ,PREDICTS ,Leukemia ,Female ,Life Sciences & Biomedicine ,Cohort study ,medicine.drug ,Adult ,medicine.medical_specialty ,Immunology ,DISCONTINUATION ,Chronic Myeloid Leukemia ,Real-Time Polymerase Chain Reaction ,IMATINIB ,Article ,Young Adult ,03 medical and health sciences ,Leukemia, Myelogenous, Chronic, BCR-ABL Positive ,Internal medicine ,Molecular monitoring ,Biomarkers, Tumor ,medicine ,Humans ,Protein Kinase Inhibitors ,Aged ,Minimal Residual Disease ,Science & Technology ,business.industry ,Imatinib ,medicine.disease ,Interim analysis ,RANDOMIZED CML ,Minimal residual disease ,BCR-ABL1 TRANSCRIPT ,Concomitant ,FOLLOW-UP ,business ,030215 immunology ,Chronic myelogenous leukemia - Abstract
The majority of patients with newly diagnosed chronic myeloid leukemia (CML) will enjoy a life expectancy equivalent to that of unaffected individuals, but will remain on life-long treatment with a concomitant requirement for on-going hospital interactions for molecular monitoring and drug dispensing. In order to determine more accurately the frequency of monitoring required, we performed a ‘real-life’ retrospective single-center cohort study of 450 patients with CML in at least major molecular remission (MR3) to analyze the risk of loss of MR3 [defined as at least 2 consecutive real-time quantitative polymerase chain reaction (RT-qPCR) results >0.1% International Scale (IS)]. Patients who achieved sustained MR4 (sMR4, BCR-ABL1 RT-qPCR
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- 2019
48. Reciprocal associations between positive emotions and motivation in daily life
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van Roekel, Eeske, Heininga, Vera, Vrijen, Charlotte, Snippe, Evelien, Oldehinkel, Albertine, Interdisciplinary Centre Psychopathology and Emotion regulation (ICPE), Youth Studies, Developmental Psychology, and Tilburg Experience Sampling Center (TESC)
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Male ,Pleasure ,DYNAMICS ,Activities of daily living ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Obsessive-compulsive and Related Disorders ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Sexual Dysfunctions ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology ,Psychological intervention ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Diagnosis ,Social and Behavioral Sciences ,Developmental psychology ,network analyses ,bepress|Social and Behavioral Sciences|Psychology|Clinical Psychology ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Self-concept and Identity ,Psychology ,bepress|Social and Behavioral Sciences|Psychology|Child Psychology ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Prenatal Development ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Early Adulthood ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Early Childhood ,General Psychology ,media_common ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Cognitive Development ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Clinical Ethics ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Bipolar and Related Disorders ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Elimination Disorders ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Moral Development ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Perceptual Development ,Clinical Psychology ,anhedonia ,Feeling ,INERTIA ,psychological phenomena and processes ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Personality Disorders ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Neurocognitive Disorders ,Experience sampling method ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Somatization ,media_common.quotation_subject ,positive emotions ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Death, Dying, and Grieving ,Reward system ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Middle Adulthood ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Emotional Development ,Humans ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Clinical Decision Making ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Motor Development ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Assessment ,Anhedonia ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Gender Dysphoria ,STATES ,Case-Control Studies ,Developmental Psychology ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Substance Abuse and Addiction ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Old Age ,EXPERIENCE ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Psychotic Disorders ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Aging ,REWARD ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Feeding and Eating Disorders ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Language Aquisition ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Clinical Psychophysiology ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Toddlerhood/Preschool Period ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Middle & Late Childhood ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Psychotherapy ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Adolescence ,bepress|Social and Behavioral Sciences|Psychology|Developmental Psychology ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Clinical Neuropsychology ,05 social sciences ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Attachment ,PREDICTS ,FOS: Psychology ,Female ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Physical Development ,medicine.symptom ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Disruptive, Impulse-control, and Conduct Disorders ,Adolescent ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Psychopharmacology ,Affect (psychology) ,050105 experimental psychology ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Anxiety Disorders ,Young Adult ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Gene-environment Interaction ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Dissociative Disorders ,motivation ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Clinical Child Psychology ,Experience Sampling Method ,medicine ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Infancy ,0501 psychology and cognitive sciences ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Sleep-wake Disorders ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Trauma and Stress ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Social Development ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Neurodevelopmental Disorders ,PsyArXiv|Social and Behavioral Sciences|Developmental Psychology|Personality Development ,PsyArXiv|Social and Behavioral Sciences ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Paraphilic Disorders ,DEPRESSIVE DISORDER ,bepress|Social and Behavioral Sciences ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Depressive Disorders ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Couples, Marriage, and Family ,PsyArXiv|Social and Behavioral Sciences|Clinical Psychology|Therapy - Abstract
Anhedonia reflects a dysfunction in the reward system, which can be manifested in an inability to enjoy pleasurable situations (i.e., lack of positive emotions), but also by a lack of motivation to engage in pleasurable activities (i.e., lack of motivation). Little is known about the interrelations between positive emotions and motivation in daily life, and whether these associations are altered in anhedonic individuals. In the present study, we used a network approach to explore the reciprocal, lagged associations between positive emotions and motivation in anhedonic individuals (N = 66) and controls (N = 68). Participants (aged between 18 and 24 years) filled out momentary assessments of affect 3 times per day for 30 consecutive days. Our results showed that (a) anhedonic individuals and controls had similar moment-to-moment transfer of positive emotions; (b) in the anhedonic network feeling cheerful was the node with the highest outstrength, both within this group and compared with the control group; (c) feeling relaxed had the highest outstrength in the control network, and (d) anhedonic individuals had stronger pathways from positive emotions to motivation than controls. Taken together, our findings suggest that low levels of positive emotions lead to decreased motivation in the anhedonic group, which could instigate a negative spiral of low pleasure and low motivation. On a more positive note, we showed that cheerfulness had the highest outstrength in the network of anhedonic participants. Hence, interventions may focus on increasing cheerfulness in anhedonic individuals, as this will likely have the greatest impact on other positive emotions and motivations. (PsycINFO Database Record (c) 2019 APA, all rights reserved).
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- 2019
49. Traditional Ecological knowledge of predicting rain for climate adapting in North Benin
- Author
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ZOUNON, Hermione Noumawudo, BACO, Nasser Mohamed, DAGOUDO, Bienvenu Akowedaho, SAHAGUI, Saddam Kadjogbé, ZOUNON, Hermione Noumawudo, BACO, Nasser Mohamed, DAGOUDO, Bienvenu Akowedaho, and SAHAGUI, Saddam Kadjogbé
- Abstract
Traditional knowledge is base of decisions taking by local population affecting their livelihood. This traditional knowledge, focusing on practices and experiences highlighted the weather and climate information which is important for rain fed agriculture in Kandi commune. This research focuses on traditional knowledge of predicting rain through the climate indicators. It was carried in four districts 4 districts (Sam, Donwari, Kassakou and Sonsoro) of Kandi commune. Through 75 interviews (resource persons at least 40 years of experience) and 7 focus groups in the community, information was gathered about traditional climate and weather indicators and prediction tools. The snowball sampling technique was used to choose the respondents. Knowledge about climate indicator is exchanged, passed on from generation to generation and concerned plant species, animal species and astronomical elements. These climate indicators revealed onset of rain season, intensity of rain in full season and the end rain season. Multiple correspondence analyses with statistical software R Version 3.02 show three categories group. One shows the indicators such as wind, thunder, Cloud, Bird. The second group combines the factors transmit to member of family and acquire by initiation. The third group concerns bird indicator.  
- Published
- 2020
50. Are alpha oscillations instrumental in multisensory synchrony perception?
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Bastiaansen, Marcel, Berberyan, Hermine, Stekelenburg, Jeroen J., Mathijs Schoffelen, Jan, Vroomen, Jean, Bastiaansen, Marcel, Berberyan, Hermine, Stekelenburg, Jeroen J., Mathijs Schoffelen, Jan, and Vroomen, Jean
- Abstract
Different inputs from a multisensory object or event are often integrated into a coherent and unitary percept, despite differences in sensory formats, neural pathways, and processing times of the involved modalities. Presumably, multisensory integration occurs if the cross-modal inputs are presented within a certain window of temporal integration where inputs are perceived as being simultaneous. Here, we examine the role of ongoing neuronal alpha (i.e. 10-Hz) oscillations in multimodal synchrony perception. While EEG was measured, participants performed a simultaneity judgement task with visual stimuli preceding auditory ones. At stimulus onset asynchronies (SOA’s) of 160–200 ms, simultaneity judgements were around 50%. For trials with these SOA’s, occipital alpha power was smaller preceding correct judgements, and the individual alpha frequency was correlated with the size of the temporal window of integration. In addition, simultaneity judgements were modulated as a function of oscillatory phase at 12.5 Hz, but the latter effect was only marginally significant. These results support the notion that oscillatory neuronal activity in the alpha frequency range, which has been taken to shape perceptual cycles, is instrumental in multisensory perception.
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- 2020
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