928 results on '"Parasitologie"'
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2. Camelology : Definitions, history and scientific challenges
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Faye, Bernard, Gahlot, Tarun Kumar, Faye, Bernard, and Gahlot, Tarun Kumar
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Since centuries, the camel is fascinating scientists over the world. If the first scientific investigations were focused on his remarkable adaptability to desert conditions and to his health management in the context of colonial expansion of European countries in desert areas, recent researches have mobilised several specific disciplines as archaeology, physiology, immunology, breeding and genetics, parasitology, surgery, imaging, diseases, food sciences, economy, or sociology. However, the camel can be regarded as a “full scientific object” legitimising the use of the word “camelology”. Present paper is an overview of chronological development of camel cultures, production and science.
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- 2024
3. Exploration Protéomique du Vecteur de la Maladie de Chagas :Dissection de l'Hématophagie et Dialogue Moléculaire avec Trypanosoma cruzi
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Bousbata, Sabrina, Vanhamme, Luc, Souopgui, Jacob, Blandin, Stéphanie, Njemini, Rose, Marini, Anna Maria, Ouali, Radouane, Bousbata, Sabrina, Vanhamme, Luc, Souopgui, Jacob, Blandin, Stéphanie, Njemini, Rose, Marini, Anna Maria, and Ouali, Radouane
- Abstract
Trypanosoma cruzi, l'agent étiologique de la maladie de Chagas, est transmis aux humains par des insectes hématophages de la sous-famille des Triatominae. Son cycle de vie intravectoriel se déroule exclusivement dans le tractus digestif de ces insectes et est étroitement lié à sa physiologie. La compréhension de la physiologie digestive, ainsi que l'exploration des mécanismes régissant l'interaction entre le parasite et les triatomines, promettent de dévoiler de nouvelles cibles cruciales pour altérer le développement du parasite et réduire la compétence vectorielle. Ce travail de thèse s'est focalisé d'une part sur l'exploration de la physiologie digestive de Rhodnius prolixus, qui, malgré son statut comme organisme modèle en physiologie des insectes et vecteur majeur de la maladie de Chagas, présente plusieurs questions concernant sa biologie digestive encore méconnues. Cela a permis de disséquer la cascade multi-peptidases impliquée dans le catabolisme de l'hémoglobine et d'illuminer le rôle digestif joué par l'intestin moyen antérieur. D'autre part, ce travail a permis d'explorer l'impact de l'établissement du parasite sur le vecteur en dévoilant des perspectives fondamentales sur l'interaction moléculaire complexe entre les triatomines et le trypanosome. L'infection par T. cruzi module le protéome de l'intestin moyen de l'insecte en manipulant l'expression de protéines impliquées dans des processus cellulaires cruciaux. De plus, la présence du parasite déclenche une réponse immunitaire systémique, caractérisée par l'expression d'un ensemble de protéines immunitaires qui pourraient agir pour maîtriser la parasitémie dans le tube digestif, empêchant ainsi la propagation de l'infection dans l'hémocoele. Ce travail a mis en lumière diverses facettes de la biologie des triatomines, et présente des cibles prometteuses exploitables pour le contrôle de la transmission de la maladie de Chagas., Option Biologie moléculaire du Doctorat en Sciences, info:eu-repo/semantics/nonPublished
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- 2024
4. Animal trypanosomosis eliminated in a major livestock production region in Senegal following the eradication of a tsetse population
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Talla Seck, Monar, Gueye Fall, Assane, Ciss, Mamadou, Bakhoum, Mame Thierno, Sall, Baba, Gaye, Adji Mareme, Gimonneau, Geoffrey, Bassène, Mireille Djimangali, Lancelot, Renaud, Vreysen, Marc J.B., Bouyer, Jérémy, Talla Seck, Monar, Gueye Fall, Assane, Ciss, Mamadou, Bakhoum, Mame Thierno, Sall, Baba, Gaye, Adji Mareme, Gimonneau, Geoffrey, Bassène, Mireille Djimangali, Lancelot, Renaud, Vreysen, Marc J.B., and Bouyer, Jérémy
- Abstract
African animal trypanosomosis (AAT) was one of the main disease-related constraints to the development of intensive livestock production systems in the Niayes region of Senegal, a 30 km wide strip of land along the coast between Dakar and Saint-Louis. To overcome this constraint, the Government of Senegal initiated an area-wide integrated pest management programme combining chemical control tactics with the sterile insect technique to eradicate a population of the tsetse fly Glossina palpalis gambiensis Vanderplank, 1949 (Diptera, Glossinidae) in this area. The project was implemented following a phased conditional approach, and the target area was divided into three blocks treated sequentially. This study aims to assess the temporal dynamics of the prevalence of Trypanosoma spp. during the implementation of this programme. Between 2009 and 2022, 4,359 blood samples were collected from cattle and screened for trypanosomes using both the buffy coat and ELISA techniques, and PCR tests since 2020. The seroprevalence decreased from 18.9% (95%CI: 11.2–26.5) in 2009 to 0% in 2017–2022 in block 1, and from 92.9% (95%CI: 88.2–97) in 2010 to 0% in 2021 in block 2. The parasitological and serological data confirm the entomological monitoring results, i.e., that there is a high probability that the population of G. p. gambiensis has been eradicated from the Niayes and that the transmission of AAT has been interrupted in the treated area. These results indicate the effectiveness of the adopted approach and show that AAT can be sustainably removed through the creation of a zone free of G. p. gambiensis.
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- 2024
5. Unveiling the Peptidase Network Orchestrating Hemoglobin Catabolism in Rhodnius prolixus
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Ouali, Radouane, Bousbata, Sabrina, Ouali, Radouane, and Bousbata, Sabrina
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info:eu-repo/semantics/published
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- 2024
6. Advances in Parasitology
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David Rollinson, Russell Stothard, David Rollinson, and Russell Stothard
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- Parasitology, Parasitologie
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Advances in Parasitology, Volume 112, the latest release in this ongoing series, includes medical studies of parasites of major influence, along with reviews of more traditional areas, such as zoology, taxonomy and life history. Chapters in this update include Taking the strain out of onchocerciasis: a reanalysis of blindness and transmission data does not support the existence of a savanna blinding strain of onchocerciasis in West Africa, Enterocytozoon bieneusi of animals, Taenia solium taeniasis/cysticercosis, Genomic analysis reveals predominant clonality and progressive evolution at all evolutionary scales in eukaryotic pathogens, HTLV-I and Strongyloides: the worm lurking beneath, and more. Informs and updates on all the latest developments in the field of parasitology Includes medical studies of parasites of major influence Features reviews of more traditional areas, such as zoology, taxonomy, and life history, which help shape current thinking and applications
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- 2021
7. POUR UN RENOUVEAU DE L’ANALYSE SPATIALE DES ÉTABLISSEMENTS RURAUX LATÉNIENS.
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MALRAIN, François, BALASSE, Marie, MAKHAD, Sammy BEN, BRASSEUR, Boris, CHEREL, Anne-Françoise, GARNIER, Nicolas, HULIN, Guillaume, MATTERNE, Véronique, and SCHMITT, Anne-Désirée
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LEGAL settlement ,THEORY of knowledge ,INFRASTRUCTURE (Economics) ,INVESTIGATIONS ,ASSOCIATIONS, institutions, etc. - Abstract
Copyright of Revue Archéologique de Picardie is the property of Revue Archeologique de Picardie and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2022
8. Retour d'expérience pour l'examen parasitologique des selles : revue des techniques et implications pour l'accréditation.
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Leméteil, Denis
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Les exigences de l'accréditation ont conduit le laboratoire du CHU de Rouen à partager son retour d'expérience sur l'examen parasitologique des selles. Ainsi, seront abordés: les contraintes pré-analytiques, les modalités d'utilisation et d'exploitation des CQI et EEQ, l'évaluation des principaux kits commerciaux par rapport aux techniques classiques, la validation/vérification des méthodes et la définition des seuils de performance des techniques. The accreditation requirements led the Rouen University Hospital Laboratory to share feedback regarding parasitological stool examination as part of the accreditation process. Thus, will be exposed: Pre-analytical obligations, both internal and external quality controls use and exploitation, evaluation of the main available commercial stool concentration kits in comparison to conventional techniques, validation and verification of methods and technical performance thresholds. [ABSTRACT FROM AUTHOR]
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- 2020
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9. SifA SUMOylation governs Salmonella Typhimurium intracellular survival via modulation of lysosomal function
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Chandrasekhar, Hridya, Mohapatra, Gayatree, Kajal, Kirti, Singh, Mukesh, Walia, Kshitiz, Rana, Sarika, Kaur, Navneet, Sharma, Sheetal, Tuli, Amit, Das, Prasenjit, Srikanth, Chittur Venkateshwaran, Chandrasekhar, Hridya, Mohapatra, Gayatree, Kajal, Kirti, Singh, Mukesh, Walia, Kshitiz, Rana, Sarika, Kaur, Navneet, Sharma, Sheetal, Tuli, Amit, Das, Prasenjit, and Srikanth, Chittur Venkateshwaran
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One of the mechanisms shaping the pathophysiology during the infection of enteric pathogen Salmonella Typhimurium is host PTM machinery utilization by the pathogen encoded effectors. Salmonella Typhimurium (S. Tm) during infection in host cells thrives in a vacuolated compartment, Salmonella containing vacuole (SCV), which sequentially acquires host endosomal and lysosomal markers. Long tubular structures, called as Salmonella induced filaments (SIFs), are further generated by S. Tm, which are known to be required for SCV's nutrient acquisition, membran maintenance and stability. A tightly coordinated interaction involving prominent effector SifA and various host adapters PLEKHM1, PLEKHM2 and Rab GTPases govern SCV integrity and SIF formation. Here, we report for the first time that the functional regulation of SifA is modulated by PTM SUMOylation at its 11th lysine. S. Tm expressing SUMOylation deficient lysine 11 mutants of SifA (SifAK11R) is defective in intracellular proliferation due to compromised SIF formation and enhanced lysosomal acidification. Furthermore, murine competitive index experiments reveal defective in vivo proliferation and weakened virulence of SifAK11R mutant. Concisely, our data reveal that SifAK11R mutant nearly behaves like a SifA knockout strain which impacts Rab9-MPR mediated lysosomal acidification pathway, the outcome of which culminates in reduced bacterial load in in vitro and in vivo infection model systems. Our results bring forth a novel pathogen-host crosstalk mechanism where the SUMOylation of effector SifA regulated S. Tm intracellular survival., SCOPUS: ar.j, info:eu-repo/semantics/published
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- 2023
10. Development of vaccine candidates against Brucella melitensis and Acinetobacter baumannii infections in a mouse model
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Muraille, Eric, De Bolle, Xavier, Van Melderen, Laurence, Arnould, Thierry, Botteaux, Anne, Van der Henst, Charles, O'Callaghan, David OCD, Barbieux, Emeline, Muraille, Eric, De Bolle, Xavier, Van Melderen, Laurence, Arnould, Thierry, Botteaux, Anne, Van der Henst, Charles, O'Callaghan, David OCD, and Barbieux, Emeline
- Abstract
Facultative intracellular bacteria of the Brucella genus cause brucellosis, a zoonotic infectionwith a significant socioeconomic impact in southern countries. The recommended liveattenuated vaccines (LAVs) against brucellosis, Rev.1 and S19, provide satisfactory protectionfor livestock but can induce abortions and are virulent for humans. This situation causes seriouseconomic losses and human infections. These first-generation LAVs were generated byempirical methods such as random attenuation by successive passages. The transposonsequencing (Tn-seq) approach offers a new avenue for the rational development of safer LAVs.Indeed, the Tn-seq approach makes it possible to predict the genes required by the bacteria togrow in different conditions such as culture medium, cell infection (in vitro) and mice infection(in vivo). These genes can then be deleted to weaken the strain and try to select new LAVcandidates. Our results demonstrate that Brucella melitensis faces different selection pressuresdepending on the infected organ. Based on our Tn-seq data, we selected genes whose deletiongenerates strains capable of multiplying temporarily in the lungs and the spleen and inducingprotective immunity but without establishing themselves permanently in the spleen, the mainreservoir organ. We tested the persistence and the induced immune protective memory of a plsCgene deletion mutant, involved in the biosynthesis of membrane phospholipids. We observedthat this mutant induces similar protection but persists less in the spleen than the referenceRev.1 vaccine, which suggests that it could be safer.Acinetobacter baumannii is a bacterium responsible for serious nosocomial infections,including pneumonia, mainly affecting immunocompromised individuals. The outbreak of drugmulti-resistant A. baumannii strains to antibiotics makes the development of a vaccine againstthis pathogen essential. In an intranasal infection model in mice, vaccination with theinactivated LAC-4 or AB5075 strain in, Doctorat en Sciences, info:eu-repo/semantics/nonPublished
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- 2023
11. Variant-specific introduction and dispersal dynamics of SARS-CoV-2 in New York City – from Alpha to Omicron
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Dellicour, Simon, Hong, Samuel S.L., Hill, Verity, Dimartino, Dacia, Marier, Christian, Zappile, Paul, Harkins, Gordon William, Lemey, Philippe, Baele, Guy, Duerr, Ralf, Heguy, Adriana, Dellicour, Simon, Hong, Samuel S.L., Hill, Verity, Dimartino, Dacia, Marier, Christian, Zappile, Paul, Harkins, Gordon William, Lemey, Philippe, Baele, Guy, Duerr, Ralf, and Heguy, Adriana
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Since the latter part of 2020, SARS-CoV-2 evolution has been characterised by the emergence of viral variants associated with distinct biological characteristics. While the main research focus has centred on the ability of new variants to increase in frequency and impact the effective reproductive number of the virus, less attention has been placed on their relative ability to establish transmission chains and to spread through a geographic area. Here, we describe a phylogeographic approach to estimate and compare the introduction and dispersal dynamics of the main SARS-CoV-2 variants – Alpha, Iota, Delta, and Omicron – that circulated in the New York City area between 2020 and 2022. Notably, our results indicate that Delta had a lower ability to establish sustained transmission chains in the NYC area and that Omicron (BA.1) was the variant fastest to disseminate across the study area. The analytical approach presented here complements non-spatially-explicit analytical approaches that seek a better understanding of the epidemiological differences that exist among successive SARS-CoV-2 variants of concern., SCOPUS: ar.j, info:eu-repo/semantics/published
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- 2023
12. Effects of maternal antenatal treatment with two doses of azithromycin added to monthly sulfadoxine-pyrimethamine for the prevention of low birth weight in Burkina Faso: an open-label randomized controlled trial
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Lingani, Moussa, Zango, Serge Henri, Valéa, Innocent, Samadoulougou, Sekou, Somé, Georges, Sanou, Maïmouna, Kaboré, Berenger, Rouamba, Toussaint, Sorgho, Hermann, Tahita, Marc Christian, Derra, Karim, Dramaix Wilmet, Michèle, Tinto, Halidou, Donnen, Philippe, Robert, Annie, Lingani, Moussa, Zango, Serge Henri, Valéa, Innocent, Samadoulougou, Sekou, Somé, Georges, Sanou, Maïmouna, Kaboré, Berenger, Rouamba, Toussaint, Sorgho, Hermann, Tahita, Marc Christian, Derra, Karim, Dramaix Wilmet, Michèle, Tinto, Halidou, Donnen, Philippe, and Robert, Annie
- Abstract
Background: Exposure during pregnancy to malaria and sexually-transmitted infections is associated with adverse birth outcomes including low birth weight (LBW). This study aimed at assessing if the adjunction of two doses of azithromycin to sulfadoxine-pyrimethamine for the intermittent preventive treatment of malaria in pregnancy can reduce LBW. Methods: A two parallel-groups, open-label randomized controlled trial involving pregnant women (16 to 35 years of age and 12 to 24 weeks of gestation as confirmed by last menstrual period or fundal height) was conducted in rural Burkina Faso. Women were assigned in a 1:1 ratio either to use azithromycin (1 g daily for 2 days) during the second and third trimesters of pregnancy plus monthly sulfadoxine-pyrimethamine (1500/75 mg) (SPAZ) (intervention) or to continue using a monthly sulfadoxine-pyrimethamine (1500/75 mg) (SP) (control). Primary outcome was a LBW (birth weight measured within 24 h after birth < 2500 g). Secondary outcomes including stillbirth, preterm birth or miscarriage are reported together with safety data. Results: A total of 992 pregnant women underwent randomization (496 per group) and 898 (90.5%) valid birth weights were available (450 in SPAZ and 448 in SP). LBW incidence was 8.7% (39/450) in SPAZ and 9.4% (42/448) in controls (p-value = 0.79). Compared with controls, pregnant women with SPAZ showed a risk ratio (RR) of 1.16 (95% confidence interval (CI 0.64–2.08]) for preterm births, 0.75 (95% CI 0.17–3.35) for miscarriage and 0.64 (95% CI 0.25–1.64) for stillbirths. No treatment-related serious adverse events (SAEs) have been observed, and there was no significant difference in the number of SAEs (13.5% [67/496] in SPAZ, 16.7% [83/496] in SP, p-value = 0.18) or AEs (17.1% [85/496] in SPAZ, 18.8% [93/496] in SP, p-value = 0.56). Conclusion: Adequate prevention regimen with monthly sulfadoxine-pyrimethamine given to all pregnant women has been proved to reduce the risk of LBW in malaria endemic areas., SCOPUS: ar.j, info:eu-repo/semantics/published
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- 2023
13. Rhodnius prolixus Hemolymph Immuno-Physiology: Deciphering the Systemic Immune Response Triggered by Trypanosoma cruzi Establishment in the Vector Using Quantitative Proteomics
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Ouali, Radouane, Vieira, Larissa Rezende, Salmon, Didier, Bousbata, Sabrina, Ouali, Radouane, Vieira, Larissa Rezende, Salmon, Didier, and Bousbata, Sabrina
- Abstract
Understanding the development of Trypanosoma cruzi within the triatomine vector at the molecular level should provide novel targets for interrupting parasitic life cycle and affect vectorial competence. The aim of the current study is to provide new insights into triatomines immunology through the characterization of the hemolymph proteome of Rhodnius prolixus, a major Chagas disease vector, in order to gain an overview of its immune physiology. Surprisingly, proteomics investigation of the immunomodulation of T. cruzi-infected blood reveals that the parasite triggers an early systemic response in the hemolymph. The analysis of the expression profiles of hemolymph proteins from 6 h to 24 h allowed the identification of a broad range of immune proteins expressed already in the early hours post-blood-feeding regardless of the presence of the parasite, ready to mount a rapid response exemplified by the significant phenol oxidase activation. Nevertheless, we have also observed a remarkable induction of the immune response triggered by an rpPGRP-LC and the overexpression of defensins 6 h post-T. cruzi infection. Moreover, we have identified novel proteins with immune properties such as the putative c1q-like protein and the immunoglobulin I-set domain-containing protein, which have never been described in triatomines and could play a role in T. cruzi recognition. Twelve proteins with unknown function are modulated by the presence of T. cruzi in the hemolymph. Determining the function of these parasite-induced proteins represents an exciting challenge for increasing our knowledge about the diversity of the immune response from the universal one studied in holometabolous insects. This will provide us with clear answers for misunderstood mechanisms in host–parasite interaction, leading to the development of new generation strategies to control vector populations and pathogen transmission., SCOPUS: ar.j, info:eu-repo/semantics/published
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- 2022
14. NK cells and monocytes modulate primary HTLV-1 infection
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Moles, Ramona, Sarkis, Sarkis, Galli, Veronica, Omsland, Maria, Artesi, Maria, Bissa, Massimiliano, McKinnon, Katherine, Brown, Sophia, Hahaut, Vincent, Washington-Parks, Robyn, Welsh, Joshua, Venzon, David D.J., Gutowska, Anna, Doster, Melvin M.N., Breed, Matthew M.W., Killoran, Kristin K.E., Kramer, Joshua, Jones, Jennifer, Moniuszko, Marcin, Van Den Broeke, Anne, Pise-Masison, Cynthia, Franchini, Genoveffa, Moles, Ramona, Sarkis, Sarkis, Galli, Veronica, Omsland, Maria, Artesi, Maria, Bissa, Massimiliano, McKinnon, Katherine, Brown, Sophia, Hahaut, Vincent, Washington-Parks, Robyn, Welsh, Joshua, Venzon, David D.J., Gutowska, Anna, Doster, Melvin M.N., Breed, Matthew M.W., Killoran, Kristin K.E., Kramer, Joshua, Jones, Jennifer, Moniuszko, Marcin, Van Den Broeke, Anne, Pise-Masison, Cynthia, and Franchini, Genoveffa
- Abstract
We investigated the impact of monocytes, NK cells, and CD8+ T-cells in primary HTLV-1 infection by depleting cell subsets and exposing macaques to either HTLV-1 wild type (HTLV-1WT) or to the HTLV-1p12KO mutant unable to infect replete animals due to a single point mutation in orf-I that inhibits its expression. The orf-I encoded p8/p12 proteins counteract cytotoxic NK and CD8+ T-cells and favor viral DNA persistence in monocytes. Double NK and CD8+ T-cells or CD8 depletion alone accelerated seroconversion in all animals exposed to HTLV-1WT. In contrast, HTLV-1p12KO infectivity was fully restored only when NK cells were also depleted, demonstrating a critical role of NK cells in primary infection. Monocyte/macrophage depletion resulted in accelerated seroconversion in all animals exposed to HTLV-1WT, but antibody titers to the virus were low and not sustained. Seroconversion did not occur in most animals exposed to HTLV-1p12KO. In vitro experiments in human primary monocytes or THP-1 cells comparing HTLV-1WT and HTLV-1p12KO demonstrated that orf-I expression is associated with inhibition of inflammasome activation in primary cells, with increased CD47 "don't-eat-me signal" surface expression in virus infected cells and decreased monocyte engulfment of infected cells. Collectively, our data demonstrate a critical role for innate NK cells in primary infection and suggest a dual role of monocytes in primary infection. On one hand, orf-I expression increases the chances of viral transmission by sparing infected cells from efferocytosis, and on the other may protect the engulfed infected cells by modulating inflammasome activation. These data also suggest that, once infection is established, the stoichiometry of orf-I expression may contribute to the chronic inflammation observed in HTLV-1 infection by modulating monocyte efferocytosis., SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2022
15. Longitudinal study based on a safety registry for malaria patients treated with artenimol–piperaquine in six European countries
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Antonella Bacchieri, Silva Tommasini, Guido Calleri, Stephan Duparc, Hans-Dieter Nothdurft, José Ramos, Gerardo Rojo-Marcos, Joaquín Salas-Coronas, Olivier Bouchaud, Emilio Merlo Pich, Emmanuel Bottieau, Matthieu Mechain, Christoph Hatz, Maurizio Iannucelli, Nicolas Vignier, Azucena Bardají, Christophe Rapp, Leo G. Visser, Yann Bourhis, Andrea Angheben, Zeno Bisoffi, Charlotte Martin, Giovan Giuseppe Mattera, María Velasco, Ron H Behrens, Tomas Jelinek, Laboratoire Educations et Pratiques de Santé (LEPS), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Sorbonne Paris Nord, Centre d'investigation clinique Antilles-Guyane (CIC - Antilles Guyane), Institut National de la Santé et de la Recherche Médicale (INSERM)-CHU Pointe-à-Pitre/Abymes [Guadeloupe] -CHU de la Martinique [Fort de France]-Centre Hospitalier Andrée Rosemon [Cayenne, Guyane Française], Institut Pierre Louis d'Epidémiologie et de Santé Publique (iPLESP), Sorbonne Université (SU)-Institut National de la Santé et de la Recherche Médicale (INSERM), Istituti di Ricovero e Cura a Carattere Scientifico (IRCCS), Institute of Tropical Medicine [Antwerp] (ITM), CHU Saint-Pierre, Universidad de Alicante, Hôpital Saint-André, Hôpital d'Instruction des Armées Begin, Service de Santé des Armées, Ludwig-Maximilians-Universität München (LMU), Universitat de Barcelona (UB), Centro de Investigação em Saúde de Manhiça [Maputo, Mozambique] (CISM), CIBER de Epidemiología y Salud Pública (CIBERESP), Leiden University Medical Center (LUMC), Swiss Tropical and Public Health Institute [Basel], University of Basel (Unibas), and London School of Hygiene and Tropical Medicine (LSHTM)
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Male ,Longitudinal study ,Artenimol ,[SDV]Life Sciences [q-bio] ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 ,030204 cardiovascular system & hematology ,0302 clinical medicine ,Belgium ,Communicable Diseases, Imported ,Germany ,Arctic medicine. Tropical medicine ,Medicine ,Imported malaria ,Longitudinal Studies ,Registries ,030212 general & internal medicine ,Malaria, Falciparum ,Child ,Pathologie maladies infectieuses ,2. Zero hunger ,education.field_of_study ,Parasitologie ,QTcF Prolongation ,Middle Aged ,Artemisinins ,3. Good health ,Drug Combinations ,Infectious Diseases ,Italy ,Child, Preschool ,030220 oncology & carcinogenesis ,Eurartesim ,Quinolines ,Female ,Adverse events ,Artemisinin ,Piperaquine ,Plasmodium falciparum ,QTc prolongation ,Safety ,France ,Adult ,medicine.medical_specialty ,Adolescent ,030231 tropical medicine ,Population ,QT interval ,Young Adult ,03 medical and health sciences ,Internal medicine ,Humans ,education ,Adverse effect ,Aged ,business.industry ,Research ,Public health ,medicine.disease ,United Kingdom ,Spain ,Parasitology ,business ,Body mass index ,Malaria - Abstract
Background: European travellers to endemic countries are at risk of malaria and may be affected by a different range of co-morbidities than natives of endemic regions. The safety profile, especially cardiac issues, of artenimol (previously dihydroartemisinin)–piperaquine (APQ) Eurartesim® during treatment of uncomplicated imported falciparum malaria is not adequately described due to the lack of longitudinal studies in this population. The present study was conducted to partially fill this gap. Methods: Participants were recruited through Health Care Provider’s safety registry in 15 centres across 6 European countries in the period 2013–2016. Adverse events (AE) were collected, with a special focus on cardiovascular safety by including electrocardiogram QT intervals evaluated after correction with either Bazett’s (QTcB) or Fridericia’s (QTcF) methods, at baseline and after treatment. QTcB and/or QTcF prolongation were defined by a value > 450 ms for males and children and > 470 ms for females. Results: Among 294 participants, 30.3% were women, 13.7% of Caucasian origin, 13.5% were current smoker, 13.6% current alcohol consumer and 42.2% declared at least one illness history. The mean (SD) age and body mass index were 39.8 years old (13.2) and 25.9 kg/m2 (4.7). Among them, 75 reported a total of 129 AE (27 serious), 46 being suspected to be related to APQ (11 serious) and mostly labelled as due to haematological, gastrointestinal, or infection. Women and Non-African participants had significantly (p < 0.05) more AEs. Among AEs, 21 were due to cardiotoxicity (7.1%), mostly QT prolongation, while 6 were due to neurotoxicity (2.0%), mostly dizziness. Using QTcF correction, QT prolongation was observed in 17/143 participants (11.9%), only 2 of them reporting QTcF > 500 ms (milliseconds) but no clinical symptoms. Using QTcB correction increases of > 60 ms were present in 9 participants (6.3%). A trend towards increased prolongation was observed in those over 65 years of age but only a few subjects were in this group. No new safety signal was reported. The overall efficacy rate was 255/257 (99.2%). Conclusions: APQ appears as an effective and well-tolerated drug for treatment of malaria in patients recruited in European countries. AEs and QT prolongation were in the range of those obtained in larger cohorts from endemic countries. Trial registration This study has been registered in EU Post-Authorization Studies Register as EUPAS6942, SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2021
16. The Pathogenic Role of Demodex Mites in Rosacea: A Potential Therapeutic Target Already in Erythematotelangiectatic Rosacea?
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Fabienne M N Forton
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Microbiologie et protistologie [parasitologie hum. et anim.] ,medicine.medical_specialty ,Benzyl benzoate ,Inflammation ,Review ,Dermatology ,Disease ,Immunotolerance ,030207 dermatology & venereal diseases ,03 medical and health sciences ,0302 clinical medicine ,Immunologie ,medicine ,Ultraviolet light ,Mite ,Demodicosis ,Dermatologie ,Parasitologie ,Ivermectin ,Tn Ag ,biology ,business.industry ,medicine.disease ,biology.organism_classification ,Acquired immune system ,VEGF ,MGL ,Standardized skin surface biopsy ,Rosacea ,RL1-803 ,030220 oncology & carcinogenesis ,medicine.symptom ,business ,Dendritic cell ,Demodex - Abstract
Rosacea is a common facial dermatosis but its definition and classification are still unclear, especially in terms of its links with demodicosis. Triggers of rosacea (ultraviolet light, heat, spicy foods, alcohol, stress, microbes) are currently considered to induce a cascading innate and then adaptive immune response that gets out of control. Recent histological and biochemical studies support the concept that this inflammatory response is a continuum, already present from the onset of the disease, even when no clinical signs of inflammation are visible. The Demodex mite is beginning to be accepted as one of the triggers of this inflammatory cascade, and its proliferation as a marker of rosacea; moreover, the papulopustules of rosacea can be effectively treated with topical acaricidal agents. Demodex proliferation appears to be a continuum process in rosacea, and may not be clinically visible at the onset of the disease. Molecular studies suggest that Demodex may induce tolerogenic dendritic cells and collaborate with vascular endothelial growth factor (VEGF) to induce T cell exhaustion and favor its own proliferation. These interactions among VEGF, Demodex, and immunity need to be explored further and the nosology of rosacea adapted accordingly. However, treating early rosacea, with only clinically visible vascular symptoms, with an acaricide may decrease early inflammation, limit potential flare-ups following laser treatment, and prevent the ultimate development of the papulopustules of rosacea. The effectiveness of this approach needs to be confirmed by prospective controlled clinical trials with long-term follow-up. Currently, the evidence suggests that patients with only vascular symptoms of rosacea should be carefully examined for the presence of follicular scales as signs of Demodex overgrowth or pityriasis folliculorum so that these patients, at least, can be treated early with an acaricidal cream.
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- 2020
17. Building Skills and Resources for Genomics, Epigenetics, and Bioinformatics Research for Africa: Report of the Joint 11th Conference of the African Society of Human Genetics and 12th H3Africa Consortium, 2018
- Author
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Peace Buto, Leon Mutesa, Charles N. Rotimi, Tina Nyunga, Robert Tumusime, Stefan Jansen, Mediatrice Uwanyirigira, Mahtaab Hayat, Bonaventure Mihigo, Jacob Souopgui, Ambroise Wonkam, Scott M. Williams, Jorge da Rocha, Melanie A. Govender, Clarisse Musanabaganwa, Michèle Ramsay, and Raj Ramesar
- Subjects
Genetic counseling ,media_common.quotation_subject ,030231 tropical medicine ,Genomics ,Virologie générale ,Bioinformatics ,Epigenesis, Genetic ,03 medical and health sciences ,0302 clinical medicine ,Virology ,Political science ,Humans ,Pathologie maladies infectieuses ,media_common ,Parasitologie ,Virologie médicale ,Computational Biology ,Human Genetics ,Articles ,Sciences bio-médicales et agricoles ,Left behind ,Human genetics ,Democracy ,Disease causation ,Infectious Diseases ,General partnership ,Africa ,Parasitology ,Theme (narrative) - Abstract
The 11th Congress of the African Society of Human Genetics (AfSHG) was held from September 16, 2018 to September 21, 2018, in conjunction with the 12th Human Heredity and Health in Africa (H3Africa) Consortium meeting in Kigali, Rwanda. The event was organized by the AfSHG in partnership with the Rwanda Society of Human Genetics and the University of Rwanda. A 2-day workshop on the application of next-generation sequencing technologies for analyzing monogenic disease in African populations was organized as part of the conference (September 22, 2018-September 23, 2018, Kigali, Rwanda). The theme of the conference was "Building skills and resources for genomics, epigenetics and bioinformatics research for Africa."The conference served as a platform to bring together members from country-specific Societies of Human Genetics, including Rwanda, Cameroon, Democratic Republic of Congo, Egypt, Mali, Senegal, and South Africa, and included 435 delegates from 38 countries, including 29 African countries that attended the conference. A major topic of discussion was how to bridge the gap between the emerging knowledge on genomics and Omics in African populations. The importance of understanding the role of genetic variation in disease causation and susceptibility among Africans was a constant theme during the meeting, as was the need to develop research infrastructure and resources to enhance healthcare systems, so that they are not left behind in the genomic revolution. It was concluded that there is a need to inspire more African scientists to train and work as investigators, clinicians, and genetic counselors in the field of human genetics in Africa. Local investments, and South-South and South-North collaboration were identified as the key drivers for the successful implementation of research and development on the continent., SCOPUS: ar.j, info:eu-repo/semantics/published
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- 2020
18. In vivo/ex vivo efficacy of artemether–lumefantrine and artesunate–amodiaquine as first-line treatment for uncomplicated falciparum malaria in children: an open label randomized controlled trial in Burkina Faso
- Author
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Hermann Sorgho, Umberto D'Alessandro, Adama Kazienga, Jean-Bosco Ouédraogo, Léa Nadège Bonkian, P. F. Mens, Innocent Valea, Moussa Lingani, Halidou Tinto, Isidore Iw Yerbanga, Henk D. F. H. Schallig, Raffaella Ravinetto, Medical Microbiology and Infection Prevention, and AII - Infectious diseases
- Subjects
Male ,0301 basic medicine ,Artemether/lumefantrine ,medicine.medical_treatment ,Uncomplicated malaria ,Artesunate ,chemistry.chemical_compound ,0302 clinical medicine ,Treatment Failure ,Malaria, Falciparum ,Artemisinin ,Child ,Pathologie maladies infectieuses ,Parasitologie ,Sub-Saharan Africa ,Artesunate/amodiaquine ,Artemisinins ,3. Good health ,Drug Combinations ,Treatment Outcome ,Infectious Diseases ,Paediatric ,Child, Preschool ,Mass Drug Administration ,Drug Therapy, Combination ,Female ,In vivo/ex vivo ,Safety ,medicine.drug ,medicine.medical_specialty ,lcsh:Arctic medicine. Tropical medicine ,Adolescent ,Efficacy ,lcsh:RC955-962 ,Plasmodium falciparum ,030106 microbiology ,030231 tropical medicine ,Dihydroartemisinin ,Amodiaquine ,Lumefantrine ,lcsh:Infectious and parasitic diseases ,Antimalarials ,Inhibitory Concentration 50 ,03 medical and health sciences ,Internal medicine ,Burkina Faso ,parasitic diseases ,medicine ,Humans ,lcsh:RC109-216 ,business.industry ,Research ,Artemether, Lumefantrine Drug Combination ,Infant ,medicine.disease ,Artemisinin-based combination therapy ,chemistry ,Parasitology ,business ,Malaria - Abstract
Background: Artemisinin-based combination therapy (ACT) is recommended to improve malaria treatment efficacy and limit drug-resistant parasites selection in malaria endemic areas. 5 years after they were adopted, the efficacy and safety of artemether-lumefantrine (AL) and artesunate-amodiaquine (ASAQ), the first-line treatments for uncomplicated malaria were assessed in Burkina Faso. Methods: In total, 440 children with uncomplicated Plasmodium falciparum malaria were randomized to receive either AL or ASAQ for 3 days and were followed up weekly for 42 days. Blood samples were collected to investigate the ex vivo susceptibility of P. falciparum isolates to lumefantrine, dihydroartemisinin (the active metabolite of artemisinin derivatives) and monodesethylamodiaquine (the active metabolite of amodiaquine). The modified isotopic micro test technique was used to determine the 50% inhibitory concentration (IC50) values. Primary endpoints were the risks of treatment failure at days 42. Results: Out of the 440 patients enrolled, 420 (95.5%) completed the 42 days follow up. The results showed a significantly higher PCR unadjusted cure rate in ASAQ arm (71.0%) than that in the AL arm (49.8%) on day 42, and this trend was similar after correction by PCR, with ASAQ performing better (98.1%) than AL (91.1%). Overall adverse events incidence was low and not significantly different between the two treatment arms. Ex vivo results showed that 6.4% P. falciparum isolates were resistant to monodesthylamodiaquine. The coupled in vivo/ex vivo analysis showed increased IC50 values for lumefantrine and monodesethylamodiaquine at day of recurrent parasitaemia compared to baseline values while for artesunate, IC50 values remained stable at baseline and after treatment failure (p > 0.05). Conclusion: These findings provide substantial evidence that AL and ASAQ are highly efficacious for the treatment of uncomplicated malaria in children in Burkina Faso. However, the result of P. falciparum susceptibility to the partner drugs advocates the need to regularly replicate such surveillance studies. This would be particularly indicated when amodiaquine is associated in seasonal malaria chemoprophylaxis (SMC) mass drug administration in children under 5 years in Burkina Faso. Trial registration clinicaltrials, NCT00808951. Registered 05 December 2008,https://clinicaltrials.gov/ct2/show/NCT00808951?cond=NCT00808951&rank=1., SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2020
19. Les hémosporidies des rapaces et corvidés en centres de soins : enquête épidémiologique 2018-2019 au centre d'accueil de faune sauvage de l’École vétérinaire d'Alfort (CHUV-FS)
- Author
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Hilka, Sarah, École nationale vétérinaire - Alfort (ENVA), Université Paris-Est Créteil Val-de-Marne - Faculté de médecine (UPEC Médecine), Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12), and Veronica Risco-Castillo
- Subjects
Hémosporidie ,Plasmodium ,Île-de-France -- France ,Parasitologie ,[SDV.BA.MVSA]Life Sciences [q-bio]/Animal biology/Veterinary medicine and animal Health ,Raptors ,Epidemiology ,Corvids ,Rapace ,Leucocytozoon ,Oiseau ,Hemosporidia ,Corvidé ,Médecine vétérinaire ,Épidémiologie ,Haemoproteus ,Bird ,Wildlife Hospital ,École vétérinaire ,Parasitology ,Centre de soins - Abstract
The scientific interest in Hemosporidia is currently being reawakened, following, amongst others, the damages they have caused on wildlife, as well as the expanding role of wildlife hospitals in matters of avifauna rehabilitation. This study’s objectives were twofold: firstly, to compile a global overview of the epidemiological situation concerning hemoparastism in the raptors and corvids fostered in a wildlife hospital in Île-de-France; secondly, to identify potential key factors in the haemosporidian infestation and its transmission in those species, in order to propose relevant risk mitigation measures. Between May 2018 and May 2019, a transversal and monocentric study was conducted on birds sheltered at the wildlife hospital of the national veterinary school of Alfort, which included 37 raptors (6 species), mainly of peri-urban origins, and 150 corvids (4 species), mainly of urban origins. The analysis of the resulting blood smears allowed for the morphological identification of Hemosporodia and gave an estimate for the parasitemia. This study highlighted the presence of three genera of hemosporidia (Haemoproteus, Leucocytozoon and Plasmodium). The close release rates between infested and non-infested birds (72% of raptors, 35% of corvids) shows the weak clinical impact of hemoparasitism. Statistical analysis of the results demonstrated a positive association between juvenile corvids and Plasmodium sp. infection. Plasmodium infestation was particularly predominant in corvids, and was also more frequently implicated in cases of co-infestations. Though it was not statistically proven, Leucocytozoon seems to be infecting raptors more often than any other genera of hemosporidia. Results suggest that hemoparasitism in raptors and corvids in wildlife hospitals is a largely sub- clinical infestation, and has very little impact of the potential release of the birds. It is therefore crucial to determine the existence of vectors in wildlife hospitals, and to limit the risk of transmission during the rehabilitation period. Thus, it will allow for the implementation of risk management measures concerning vector control and will reduce the risk of dissemination of hemosporidies via released birds.; Les hémosporidies bénéficient d'un regain d'intérêt à l'heure actuelle suite, entre autres, aux dommages qu'elles ont pu causer sur la faune sauvage et à l'importance croissante des centres de soin dans la réhabilitation de l'avifaune. Les objectifs de cette étude étaient de réaliser un état des lieux de la situation épidémiologique de l'hémoparasitisme touchant les rapaces et corvidés accueillis dans un centre de soins de la faune sauvage en Île-de-France, d'identifier de potentiels facteurs influençant l'infestation et sa transmission, afin de proposer des mesures adaptées de gestion du risque représenté par l'hémoparasitisme sur les rapaces et corvidés. Une étude transversale monocentrique était réalisée sur 37 rapaces (6 espèces) principalement d'origine péri-urbaine et 150 corvidés majoritairement d'origine urbaine (4 espèces) arrivés au Chuv- FS de l'EnvA entre mai 2018 et mai 2019. L'analyse des frottis a permit l'identification morphologique des hémosporodies et l'estimation de la parasitémie. Cette étude a mis en évidence trois genres d'hémosporidies (Haemoproteus, Leucocytozoon et Plasmodium). Le taux de relâché très proche parmi les infestés et non infestés (72% des rapaces, 35% des corvidés) montre la faible incidence clinique liée à l'hémoparasitisme. L'analyse statistique des résultats a montré une association positive entre les corvidés juvéniles et l'infection par Plasmodium sp., L'infestation à Plasmodium en particulier était prédominante chez les corvidés et était aussi plus fréquemment impliquée dans les cas de co-infestations. Bien que non démontré statistiquement, Leucocytozoon semblait infester plus fréquemment les rapaces que les autres genres d'hémosporidies. Les résultats suggèrent que l'hémoparasitisme chez les rapaces et corvidés en centre de soins est une infestation majoritairement subclinique influençant probablement peu le potentiel relâché des oiseaux. Il est donc important de déterminer la présence des vecteurs dans les centres de soin et le risque de transmission pendant la période de réhabilitation. Ceci permettra d'établir les mesures de gestion de ce risque sur la lutte antivectorielle et permettra de réduire le risque de dissémination des hémosporidies lors des relachés.
- Published
- 2022
20. Vétérinaires: les risques liés aux antiparasitaires externes en application cutanée
- Author
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Biétrix, Jacques, Bégon, Elisabeth, Demay, Flore, Laurentie, Sylviane, and Chiffoleau, Emmanuelle
- Subjects
médicament vétérinaire ,antiparasitic ,parasitology ,bonnes pratiques ,[SDV.BA.MVSA] Life Sciences [q-bio]/Animal biology/Veterinary medicine and animal Health ,good practice ,veterinary drug ,travailleur ,parasitologie ,veterinary medicine ,hygiene and security ,hygiène et sécurité ,médecine vétérinaire ,vétérinaire ,veterinarian ,antiparasitaire ,worker - Abstract
Les antiparasitaires externes en application cutanée pour animaux de compagnie font partie des médicaments vétérinaires les plus vendus en pharmacie. Comme tous les médicaments, leur utilisation est susceptible d’induire des effets indésirables qui peuvent être limités en respectant certaines précautions d’emploi.
- Published
- 2022
21. Thérapeutique en apiculture :bien utiliser les médicaments contre Varroa destructor
- Author
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Jacques, Bietrix and Chiffoleau, Emmanuelle
- Subjects
therapy ,médicament vétérinaire ,parasitology ,bonnes pratiques ,[SDV.BA.MVSA] Life Sciences [q-bio]/Animal biology/Veterinary medicine and animal Health ,good practice ,veterinary drug ,antibiotiques ,apiculture ,parasitologie ,antibiotic use ,veterinary medicine ,pharmacovigilance ,Varroa destructor ,parasite ,médecine vétérinaire ,antiparasitaire ,thérapie - Abstract
La gestion de Varroa destructor est un impératif sanitaire pour la filière apicole. La disponibilité du médicament vétérinaire en apiculture a considérablement évolué au cours des 10 dernières années. Néanmoins, la gestion de l ’infestation reste complexe et une bonne connaissance des modalités d ’utilisation de ces médicaments est nécessaire pour élaborer un protocole de traitement adapté à chaque situation sur le terrain. Un certain nombre de paramètres comme la rapidité d ’action, les conditions de diffusion, le risque de résistance et l ’adéquation par rapport au parcours de production des colonies doivent être pris en compte pour le choix du traitement. Enfin, ces traitements doivent être associés à des méthodes de luttes zootechniques, et à un suivi régulier de l ’infestation tout au long de l ’année pour permettre une bonne maîtrise du parasite.
- Published
- 2022
22. Assessing field performance of ultrasensitive rapid diagnostic tests for malaria: a systematic review and meta-analysis
- Author
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Celestin Danwang, Fati Kirakoya-Samadoulougou, and Sekou Samadoulougou
- Subjects
medicine.medical_specialty ,RC955-962 ,Plasmodium falciparum ,030231 tropical medicine ,Infectious and parasitic diseases ,RC109-216 ,Sensitivity and Specificity ,03 medical and health sciences ,Reference test ,0302 clinical medicine ,Arctic medicine. Tropical medicine ,Internal medicine ,parasitic diseases ,Humans ,Medicine ,In patient ,030212 general & internal medicine ,Malaria, Falciparum ,Pathologie maladies infectieuses ,Parasitologie ,biology ,Diagnostic Tests, Routine ,business.industry ,Research ,Diagnostic test ,biology.organism_classification ,medicine.disease ,Confidence interval ,Infectious Diseases ,Meta-analysis ,Parasitology ,business ,Malaria ,Field conditions - Abstract
Background: To overcome the limitations of conventional malaria rapid diagnostic tests (cRDTs) in diagnosing malaria in patients with low parasitaemia, ultrasensitive malaria rapid diagnostic tests (uRDTs) have recently been developed, with promising results under laboratory conditions. The current study is the first meta-analysis comparing the overall sensitivity, and specificity of newly developed ultrasensitive Plasmodium falciparum malaria RDT (Alere™ Ultra-sensitive Malaria Ag P. falciparum RDT) with the cRDT conducted in the same field conditions. Methods: PubMed, EMBASE, Cochrane infectious diseases group specialized register, and African Journals Online (AJOL) were searched up to 20th April 2021. Studies with enough data to compute sensitivity and specificity of uRDT and cRDT were retrieved. A random-effect model for meta-analysis was used to obtain the pooled sensitivity and specificity. Results: Overall, 15 data sets from 14 studies were included in the meta-analysis. The overall sensitivity of the Alere™ ultra-sensitive Malaria Ag P. falciparum RDT regardless of the reference test and the clinical presentation of participants, was 55.5% (95% confidence interval [CI]: 45.5; 65.0), while the sensitivity regardless of the reference test and the clinical presentation of participants, was 42.9% (95% CI: 31.5; 55.2) for the cRDT performed in the same field conditions. When PCR was used as reference test, the sensitivity of uRDT was 60.4% (95% CI: 50.8; 69.2), while the sensitivity was 49.4% (95% CI: 38.2; 60.6) for the cRDT. The pooled specificity of uRDT regardless of the reference test and the clinical presentation of participants was 98.6% (95% CI: 97.1; 99.4), and the pooled specificity of cRDT regardless of the reference test and the clinical presentation of participants was 99.3% (95% CI: 98.1; 99.7). When PCR was used as reference test the specificity of uRDT and cRDT was 97.5% (95% CI: 94.1; 98.9) and 98.2% (95% CI: 95.5; 99.3). Regardless of the reference test used, the sensitivity of Alere™ Ultra-sensitive Malaria Ag P. falciparum RDT in symptomatic patients was 72.1% (95%CI: 67.4; 76.4), while sensitivity of cRDT was 67.4% (95%CI: 57.6; 75.9). Conclusion: Findings of the meta-analysis show that Alere™ Ultra-sensitive Malaria Ag P. falciparum RDT compared to cRDT performed in the same field conditions has higher sensitivity but lower specificity although the difference is not statistically significant., SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2021
23. Development of alternative strategies for the elimination of filariasis in Central Africa
- Author
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Jérémy Campillo, Recherches Translationnelles sur le VIH et les maladies infectieuses endémiques et émergentes (TransVIHMI), Institut de Recherche pour le Développement (IRD)-Université de Yaoundé I-Université Cheikh Anta Diop [Dakar, Sénégal] (UCAD)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM), Université Montpellier, Sébastien Bertout, Cédric Chesnais, Recherches Translationnelles sur le VIH et les maladies infectieuses endémiques er émergentes (TransVIHMI), and Université Cheikh Anta Diop [Dakar, Sénégal] (UCAD)-Institut de Recherche pour le Développement (IRD)-Université de Yaoundé I-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM)-Université Montpellier 1 (UM1)
- Subjects
Parasitologie ,Afrique ,Ivermectin ,Essais Cliniques ,Ivermectine ,Epidemiology ,Africa ,Clinical Trials ,Parasitology ,Epidémiologie ,Filarioses ,[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology ,Filariasis - Abstract
Onchocerciasis and lymphatic filariasis are both parasitic diseases that are targeted for elimination by control programs in Central Africa. These programs are based on massive drug administration to the entire population living in endemic areas. The choice of drugs used is based on the endemicity of onchocerciasis and lymphatic filariasis. Thus, ivermectin is used in areas where only onchocerciasis is endemic, while the combination of ivermectin and albendazole is used in areas where lymphatic filariasis and onchocerciasis are coendemic.These treatments must be repeated because they kill the larval stage of the parasite, the microfilariae, but not the adult worms. These control programs are undoubtedly successful, but the fight continues. A current issue is the use of ivermectin in areas where another filariasis, loaisis, is also endemic. Indeed, subjects with a high microfilarial density of Loa loa in the blood are at risk of serious post-ivermectin adverse effects. Although the benefit/risk ratio of mass ivermectin treatment remains acceptable in these areas when onchocerciasis or lymphatic filariasis are meso-hyperendemic, it is not acceptable when they are hypoendemic.In order to interrupt the transmission of lymphatic filariasis and onchocerciasis, it is essential to develop effective and safe alternative strategies to control these filariasis in areas where they are hypoendemic and coendemic for loaisis, and to accelerate the control of these filariasis in areas where they are meso- or hyperendemic and coendemic for loaisis. Finally, in order to treat these areas, it seems important to better understand loaisis, which has been ignored by public health programs.This work provides new evidence for the evaluation of an existing alternative strategy: the semi-annual administration of albendazole against lymphatic filariasis in areas where loaisis is endemic. The added value of maintaining good compliance with mass albendazole administration programs has been evaluated.This work also reports the results of a clinical trial investigating the use of levamisole to decrease Loa loa microfilaremia below the threshold for the occurrence of severe post-ivermectin adverse effects, and thus would allow the safe administration of ivermectin to the general population in control programs.New approaches have also been investigated: the prophylactic effect of ivermectin which could be of interest in accelerating control through more frequent mass treatments and as chemoprophylaxis for travelers and expatriates.The use of levamisole in the management of loaisis or of ivermectin as chemoprophylaxis for onchocerciasis requires a precise evaluation of the safety of these molecules. We have thus conducted two pharmacovigilance studies using the WHO global pharmacovigilance database.Finally, concerning loaisis, we have studied and modeled the daily periodicity, the short- and long-term variability as well as the diagnostic variability of blood microfilaremia allowing to improve our understanding of the parasite and thus to bring new elements that will be useful in interventions seeking to evaluate new alternative strategies to manage endemic areas for loaisis; L'onchocercose et la filariose lymphatique sont toutes les deux des parasitoses faisant l'objet de programmes de lutte visant leurs éliminations en Afrique centrale. Ces programmes reposent sur l'administration massive de médicaments à toute la population vivant en zone d'endémie. Le choix des médicaments utilisés repose sur l’endémicité de l’onchocercose et de la filariose lymphatique. Ainsi, l'ivermectine est utilisée dans les zones où seule l'onchocercose est endémique tandis que l'association ivermectine et albendazole est utilisée dans les zones où la filariose lymphatique et l’onchocercose sont coendémiques.Ces traitements doivent être répétés car ils tuent le stade larvaire du parasite, les microfilaires, mais pas les vers adultes. Ces programmes de lutte sont, sans aucun doute, une réussite mais la lutte continue. Une problématique qui se pose actuellement est l’utilisation d'ivermectine dans les zones où une autre filariose, la loase, est également endémique. En effet, les sujets ayant une forte densité microfilarienne à Loa loa dans le sang sont à risque d'effet secondaire grave post-ivermectine. Bien que le rapport bénéfice/risque des traitements de masse par ivermectine reste acceptable dans ces zones lorsque l’onchocercose ou la filariose lymphatique sont méso-hyperendémiques, il ne l'est pas en lorsqu’elles sont hypoendémiques. Afin d’interrompre la transmission de la filariose lymphatique et de l’onchocercose, il est primordial de mettre en place des stratégies alternatives efficaces et sûres permettant de lutter contre ces filarioses dans les régions où elles sont hypoendémiques et coendémiques pour la loase et d’accélérer la lutte contre ces filarioses dans les régions où elles sont méso- ou hyperendémiques et coendémiques pour la loase. Enfin, pour parvenir à traiter ces zones, il semble important de mieux comprendre la loase, jusque-là ignoré par les programmes de santé publique.Ces travaux apportent de nouveaux éléments concernant l’évaluation d’une stratégie alternative déjà existante : l’administration semi-annuel d’albendazole contre la filariose lymphatique dans les zones où la loase est endémique. La valeur ajoutée du maintien d’une bonne observance thérapeutique aux programmes d’administration de masse d’albendazole a été évaluée.Ces travaux rapportent également les résultats d’un essai clinique portant sur l’utilisation du lévamisole pour diminuer la microfilarémie à Loa loa en dessous du seuil d’apparition des effets secondaires graves post-ivermectine, et ainsi permettrait l’administration sûre d’ivermectine à l’ensemble de la population dans le cadre des programmes de lutte.De nouvelles pistes de recherche ont également été étudiées : l’effet prophylactique de l’ivermectine qui pourrait avoir un intérêt dans le cadre de l’accélération de la lutte par mise en place de traitements de masse plus fréquents et en tant que chimioprophylaxie préexposition à destination des voyageurs et des expatriés.L’utilisation de lévamisole dans la prise en charge de la loase ou de l’ivermectine en chimioprophylaxie pour l’onchocercose nécessite d’évaluer précisément la sécurité d’emploi de ces molécules. Nous avons ainsi conduit deux études de pharmacovigilance à partir de la base mondiale de pharmacovigilance de l’OMS.Enfin, concernant la loase, nous avons étudié et modélisé la périodicité journalière, la variabilité à court terme et à long terme ainsi que la variabilité diagnostique de la microfilarémie sanguine permettant de mieux comprendre le parasite et donc d’apporter des éléments qui seront utiles dans les interventions cherchant à évaluer de nouvelles stratégies alternatives pour prendre en charge les zones d’endémie pour la loase.
- Published
- 2021
24. Development of alternative strategies for the elimination of filariasis in Central Africa
- Author
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Campillo, Jérémy, Recherches Translationnelles sur le VIH et les maladies infectieuses endémiques er émergentes (TransVIHMI), Université Cheikh Anta Diop [Dakar, Sénégal] (UCAD)-Institut de Recherche pour le Développement (IRD)-Université de Yaoundé I-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM)-Université Montpellier 1 (UM1), Université Montpellier, Sébastien Bertout, Cédric Chesnais, Institut de Recherche pour le Développement (IRD)-Université de Yaoundé I-Université Cheikh Anta Diop [Dakar, Sénégal] (UCAD)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM), and STAR, ABES
- Subjects
Parasitologie ,[SDV.MHEP] Life Sciences [q-bio]/Human health and pathology ,Ivermectin ,Ivermectine ,Epidemiology ,Epidémiologie ,Filarioses ,Filariasis ,Afrique ,Essais Cliniques ,Africa ,Clinical Trials ,Parasitology ,[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology - Abstract
Onchocerciasis and lymphatic filariasis are both parasitic diseases that are targeted for elimination by control programs in Central Africa. These programs are based on massive drug administration to the entire population living in endemic areas. The choice of drugs used is based on the endemicity of onchocerciasis and lymphatic filariasis. Thus, ivermectin is used in areas where only onchocerciasis is endemic, while the combination of ivermectin and albendazole is used in areas where lymphatic filariasis and onchocerciasis are coendemic.These treatments must be repeated because they kill the larval stage of the parasite, the microfilariae, but not the adult worms. These control programs are undoubtedly successful, but the fight continues. A current issue is the use of ivermectin in areas where another filariasis, loaisis, is also endemic. Indeed, subjects with a high microfilarial density of Loa loa in the blood are at risk of serious post-ivermectin adverse effects. Although the benefit/risk ratio of mass ivermectin treatment remains acceptable in these areas when onchocerciasis or lymphatic filariasis are meso-hyperendemic, it is not acceptable when they are hypoendemic.In order to interrupt the transmission of lymphatic filariasis and onchocerciasis, it is essential to develop effective and safe alternative strategies to control these filariasis in areas where they are hypoendemic and coendemic for loaisis, and to accelerate the control of these filariasis in areas where they are meso- or hyperendemic and coendemic for loaisis. Finally, in order to treat these areas, it seems important to better understand loaisis, which has been ignored by public health programs.This work provides new evidence for the evaluation of an existing alternative strategy: the semi-annual administration of albendazole against lymphatic filariasis in areas where loaisis is endemic. The added value of maintaining good compliance with mass albendazole administration programs has been evaluated.This work also reports the results of a clinical trial investigating the use of levamisole to decrease Loa loa microfilaremia below the threshold for the occurrence of severe post-ivermectin adverse effects, and thus would allow the safe administration of ivermectin to the general population in control programs.New approaches have also been investigated: the prophylactic effect of ivermectin which could be of interest in accelerating control through more frequent mass treatments and as chemoprophylaxis for travelers and expatriates.The use of levamisole in the management of loaisis or of ivermectin as chemoprophylaxis for onchocerciasis requires a precise evaluation of the safety of these molecules. We have thus conducted two pharmacovigilance studies using the WHO global pharmacovigilance database.Finally, concerning loaisis, we have studied and modeled the daily periodicity, the short- and long-term variability as well as the diagnostic variability of blood microfilaremia allowing to improve our understanding of the parasite and thus to bring new elements that will be useful in interventions seeking to evaluate new alternative strategies to manage endemic areas for loaisis, L'onchocercose et la filariose lymphatique sont toutes les deux des parasitoses faisant l'objet de programmes de lutte visant leurs éliminations en Afrique centrale. Ces programmes reposent sur l'administration massive de médicaments à toute la population vivant en zone d'endémie. Le choix des médicaments utilisés repose sur l’endémicité de l’onchocercose et de la filariose lymphatique. Ainsi, l'ivermectine est utilisée dans les zones où seule l'onchocercose est endémique tandis que l'association ivermectine et albendazole est utilisée dans les zones où la filariose lymphatique et l’onchocercose sont coendémiques.Ces traitements doivent être répétés car ils tuent le stade larvaire du parasite, les microfilaires, mais pas les vers adultes. Ces programmes de lutte sont, sans aucun doute, une réussite mais la lutte continue. Une problématique qui se pose actuellement est l’utilisation d'ivermectine dans les zones où une autre filariose, la loase, est également endémique. En effet, les sujets ayant une forte densité microfilarienne à Loa loa dans le sang sont à risque d'effet secondaire grave post-ivermectine. Bien que le rapport bénéfice/risque des traitements de masse par ivermectine reste acceptable dans ces zones lorsque l’onchocercose ou la filariose lymphatique sont méso-hyperendémiques, il ne l'est pas en lorsqu’elles sont hypoendémiques. Afin d’interrompre la transmission de la filariose lymphatique et de l’onchocercose, il est primordial de mettre en place des stratégies alternatives efficaces et sûres permettant de lutter contre ces filarioses dans les régions où elles sont hypoendémiques et coendémiques pour la loase et d’accélérer la lutte contre ces filarioses dans les régions où elles sont méso- ou hyperendémiques et coendémiques pour la loase. Enfin, pour parvenir à traiter ces zones, il semble important de mieux comprendre la loase, jusque-là ignoré par les programmes de santé publique.Ces travaux apportent de nouveaux éléments concernant l’évaluation d’une stratégie alternative déjà existante : l’administration semi-annuel d’albendazole contre la filariose lymphatique dans les zones où la loase est endémique. La valeur ajoutée du maintien d’une bonne observance thérapeutique aux programmes d’administration de masse d’albendazole a été évaluée.Ces travaux rapportent également les résultats d’un essai clinique portant sur l’utilisation du lévamisole pour diminuer la microfilarémie à Loa loa en dessous du seuil d’apparition des effets secondaires graves post-ivermectine, et ainsi permettrait l’administration sûre d’ivermectine à l’ensemble de la population dans le cadre des programmes de lutte.De nouvelles pistes de recherche ont également été étudiées : l’effet prophylactique de l’ivermectine qui pourrait avoir un intérêt dans le cadre de l’accélération de la lutte par mise en place de traitements de masse plus fréquents et en tant que chimioprophylaxie préexposition à destination des voyageurs et des expatriés.L’utilisation de lévamisole dans la prise en charge de la loase ou de l’ivermectine en chimioprophylaxie pour l’onchocercose nécessite d’évaluer précisément la sécurité d’emploi de ces molécules. Nous avons ainsi conduit deux études de pharmacovigilance à partir de la base mondiale de pharmacovigilance de l’OMS.Enfin, concernant la loase, nous avons étudié et modélisé la périodicité journalière, la variabilité à court terme et à long terme ainsi que la variabilité diagnostique de la microfilarémie sanguine permettant de mieux comprendre le parasite et donc d’apporter des éléments qui seront utiles dans les interventions cherchant à évaluer de nouvelles stratégies alternatives pour prendre en charge les zones d’endémie pour la loase.
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- 2021
25. Maladies infectieuses émergentes : des processus complexes, di?ciles à prédire.
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Guégan, Jean-François
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26. Distinct APOL1 functions in trypanosomes and kidney podocytes
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Pays, Etienne and Pays, Etienne
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The human serum protein apolipoprotein L1 (APOL1) kills Trypanosoma brucei but not the sleeping sickness agent Trypanosoma rhodesiense. APOL1 C-terminal variants can kill T. rhodesiense but they also induce kidney disease. Given topological and functional differences between intracellular and extracellular APOL1 isoforms, I propose that trypanolysis and kidney disease result from distinct APOL1 activities., SCOPUS: sh.j, DecretOANoAutActif, info:eu-repo/semantics/published
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- 2021
27. Effect of personalized support at home on the prevalence of anemia in pregnancy in Burkina Faso: A cluster randomized trial
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Ilboudo, Bernard, Savadogo, Léon, Traoré, Isidore, Meda, Clément Ziemlé, Kinda, Maurice, Sombié, Issiaka, Dramaix Wilmet, Michèle, Donnen, Philippe, Ilboudo, Bernard, Savadogo, Léon, Traoré, Isidore, Meda, Clément Ziemlé, Kinda, Maurice, Sombié, Issiaka, Dramaix Wilmet, Michèle, and Donnen, Philippe
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Burkina Faso has high prevalence of anemia in pregnancy (hemoglobin < 11 g/dL), despite the implementation of the WHO recommended guidelines. This study aimed to test the effects of personalized support for pregnant women at home on the trend of anemia prevalence in pregnancy. A cluster randomized trial was conducted from January 2015 to August 2016 at Sindou health district in Burkina Faso. Data were collected from 617 women in their first or second trimester of pregnancy, including 440 and 177 women in the intervention and control groups, respectively. The intervention consisted of a monthly home-based visit to the pregnant woman, focusing on nutritional counseling and pregnancy management, alongside an improvement antenatal visit quality. Compared with the prevalence of anemia in pregnancy in the control group [64.0% (95% confidence interval [CI]: 52.1-74.4%)], that of the intervention group was significantly lower from the fifth home visit onward [36.8% (95% CI: 32.1-41.8%)] (P < 0.001). The adjusted difference-in-differences in anemia prevalence between the two groups was -19.8% (95% CI: -30.2% to -9.4%) for women who received more than four home visits (P < 0.001). The corresponding difference in hemoglobin levels was 0.644 g/dL (95% CI: 0.309-0.167; P < 0.001). Personalized support for pregnant women at home, combined with appropriate antenatal care, can significantly reduce anemia prevalence during pregnancy in rural Burkina Faso., SCOPUS: ar.j, info:eu-repo/semantics/published
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- 2021
28. A lower global lung ultrasound score is associated with higher likelihood of successful extubation in invasively ventilated COVID-19 patients
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Pierrakos, Charalampos, Lieveld, Arthur, Pisani, Luigi, Smit, Marry M.R., Heldeweg, Micah, Hagens, Laura L.A., Smit, Jasper, Haaksma, Mark, Veldhuis, Lars, Schmidt, Robin Walburgh, Errico, Giacomo, Marinelli, Valentina, Attou, Rachid, David, Cristina, Zimatore, Claudio, Murgolo, Francesco, Grasso, Salvatore, Mirabella, Lucia, Cinnella, Gilda, De Bels, David, Schultz, Marcus M.J., Tuinman, Pieter Roel, Bos, Lieuwe D J L.D., Pierrakos, Charalampos, Lieveld, Arthur, Pisani, Luigi, Smit, Marry M.R., Heldeweg, Micah, Hagens, Laura L.A., Smit, Jasper, Haaksma, Mark, Veldhuis, Lars, Schmidt, Robin Walburgh, Errico, Giacomo, Marinelli, Valentina, Attou, Rachid, David, Cristina, Zimatore, Claudio, Murgolo, Francesco, Grasso, Salvatore, Mirabella, Lucia, Cinnella, Gilda, De Bels, David, Schultz, Marcus M.J., Tuinman, Pieter Roel, and Bos, Lieuwe D J L.D.
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Lung ultrasound (LUS) can be used to assess loss of aeration, which is associated with outcome in patients with coronavirus disease 2019 (COVID-19) presenting to the emergency department. We hypothesized that LUS scores are associated with outcome in critically ill COVID-19 patients receiving invasive ventilation. This retrospective international multicenter study evaluated patients with COVID-19-related acute respiratory distress syndrome (ARDS) with at least one LUS study within 5 days after invasive mechanical ventilation initiation. The global LUS score was calculated by summing the 12 regional scores (range 0-36). Pleural line abnormalities and subpleural consolidations were also scored. The outcomes were successful liberation from the ventilator and intensive care mortality within 28 days, analyzed with multistate, competing risk proportional hazard models. One hundred thirty-seven patients with COVID-19-related ARDS were included in our study. The global LUS score was associated with successful liberation from mechanical ventilation (hazard ratio [HR]: 0.91 95% confidence interval [CI] 0.87-0.96; P 5 0.0007) independently of the ARDS severity, but not with 28 days mortality (HR: 1.03; 95% CI 0.97-1.08; P 5 0.36). Subpleural consolidation and pleural line abnormalities did not add to the prognostic value of the global LUS score. Examinations within 24 hours of intubation showed no prognostic value. To conclude, a lower global LUS score 24 hours after invasive ventilation initiation is associated with increased probability of liberation from the mechanical ventilator COVID-19 ARDS patients, independently of the ARDS severity., SCOPUS: ar.j, info:eu-repo/semantics/published
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- 2021
29. The HTLV-1 viral oncoproteins Tax and HBZ reprogram the cellular mRNA splicing landscape
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Vandermeulen, Charlotte, O’Grady, Tina, Wayet, Jérôme, Galvan, Bartimee, Maseko, Sibusiso, Cherkaoui, Majid, Desbuleux, Alice, Coppin, Georges, Olivet, Julien, Ameur, Lamya Ben, Kataoka, Keisuke, Ogawa, Seishi, Hermine, Olivier, Marçais, Ambroise, Thiry, Marc, Mortreux, Franck, Calderwood, Michael A, van Weyenbergh, Johan, Peloponese, Jean Marie, Charloteaux, Benoît, Van Den Broeke, Anne, Hill, David D.E., Vidal, Marc, Dequiedt, Franck, Twizere, Jean-Claude, Vandermeulen, Charlotte, O’Grady, Tina, Wayet, Jérôme, Galvan, Bartimee, Maseko, Sibusiso, Cherkaoui, Majid, Desbuleux, Alice, Coppin, Georges, Olivet, Julien, Ameur, Lamya Ben, Kataoka, Keisuke, Ogawa, Seishi, Hermine, Olivier, Marçais, Ambroise, Thiry, Marc, Mortreux, Franck, Calderwood, Michael A, van Weyenbergh, Johan, Peloponese, Jean Marie, Charloteaux, Benoît, Van Den Broeke, Anne, Hill, David D.E., Vidal, Marc, Dequiedt, Franck, and Twizere, Jean-Claude
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Viral infections are known to hijack the transcription and translation of the host cell. However, the extent to which viral proteins coordinate these perturbations remains unclear. Here we used a model system, the human T-cell leukemia virus type 1 (HTLV-1), and systematically analyzed the transcriptome and interactome of key effectors oncoviral proteins Tax and HBZ. We showed that Tax and HBZ target distinct but also common transcription factors. Unexpectedly, we also uncovered a large set of interactions with RNA-binding proteins, including the U2 auxiliary factor large subunit (U2AF2), a key cellular regulator of pre-mRNA splicing. We discovered that Tax and HBZ perturb the splicing landscape by altering cassette exons in opposing manners, with Tax inducing exon inclusion while HBZ induces exon exclusion. Among Tax- and HBZ-dependent splicing changes, we identify events that are also altered in Adult T cell leukemia/lymphoma (ATLL) samples from two independent patient cohorts, and in well-known cancer census genes. Our interactome mapping approach, applicable to other viral oncogenes, has identified spliceosome perturbation as a novel mechanism coordinated by Tax and HBZ to reprogram the transcriptome., SCOPUS: ar.j, info:eu-repo/semantics/published
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- 2021
30. Le rôle du Demodex dans la rosacée. La rosacée avec papulopustules :une démodécie
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Parmentier, Marc, De Maertelaer, Viviane, Le Moine, Alain, Cribier, Bernard, Saurat, Jean Hilaire, Kolivras, Athanassios, Richert, Bertrand, Verhoeven, Caroline, Forton, Fabienne, Parmentier, Marc, De Maertelaer, Viviane, Le Moine, Alain, Cribier, Bernard, Saurat, Jean Hilaire, Kolivras, Athanassios, Richert, Bertrand, Verhoeven, Caroline, and Forton, Fabienne
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Le Demodex, petit acarien vivant dans les follicules pilo-sébacés de tous les humains adultes, est reconnu responsable des démodécies chez l’homme mais n’est considéré dans la rosacée, au plus, que comme un facteur aggravant potentiel d’une inflammation préexistante. Toutes nos observations, depuis 1983, convergent vers la confirmation de son rôle pathogène dans la rosacée, et suggèrent des liens physiopathologiques clairs entre rosacées avec papulopustules (RPP) avec ou sans érythème permanent, rosacée érythématotélangiectasique (RET), pityriasis folliculorum et autres démodécies. (1) Dans les biopsies cutanées, le Demodex est associé à l’inflammation périfolliculaire. (2) Le concept de densité en Demodex a été introduit et une méthode de prélèvement standardisée permettant de mesurer cette densité a été développée, puis perfectionnée. (3) Elle a permis de montrer que cette densité était nettement supérieure chez les patients atteints de démodécie et de RPP, que chez ceux avec peau saine et ceux atteints d’autres dermatoses faciales, les patients avec RPP sans prolifération en Demodex étant exceptionnels. (4) Un test diagnostique hautement spécifique et sensible, utilisable facilement en consultation a été élaboré et validé. (5) Des signes cliniques discrets de ces dermatoses ont été mis en évidence, de même que la grande fréquence des démodécies en consultation de dermatologie (alors qu’elles sont très peu diagnostiquées). (6) L’effet acaricide sur le Demodex de six traitements topiques a été comparé in vivo et les meilleures molécules ont été utilisées pendant une vingtaine d’années :sur base des résultats collectés, l’efficacité du traitement a été démontrée, non seulement sur la densité en Demodex mais également sur les symptômes cliniques, tant parmi les démodécies que dans la RPP, ce qui prouve indirectement que la prolifération en parasites n’est pas un épiphénomène mais est bien la cause de la maladie. (7) Parmi les modalités comparées, les plus intenses on, Demodex folliculorum and Demodex brevis are small mites living in the pilosebaceous follicles of all adult humans. They are known to be responsible for demodicosis in humans but in rosacea are generally considered only as a potential aggravating factor of pre-existing inflammation. However, our observations since 1983 converge towards a pathogenic role of the Demodex mite in rosacea, and suggest clear pathophysiological links between rosacea with papulopustules (PPR) with or without persistent erythema, erythematotelangiectatic rosacea (ETR), pityriasis folliculorum and other demodicoses. Summarising our findings: (1) In skin biopsies, Demodex is statistically associated with perifollicular inflammation. (2) The concept of Demodex density was introduced and a method to measure it using two consecutive standardized skin surface biopsies was developed and refined. (3) It was shown that Demodex density was significantly higher in patients with demodicosis and PPR than in those with healthy skin and with other facial dermatoses; patients with PPR without Demodex proliferation detected are rare, and the few cases that do occur likely correspond to false negative results linked to proliferation of the mites deep in the pilosebaceous follicles, thus not detected by the sampling method. (4) A highly specific and sensitive diagnostic test based on the results from two consecutive standardized skin surface biopsies was developed and validated and can be easily used during clinical consultation. (5) Less well-known clinical signs of these dermatoses were highlighted, as well as the high frequency of demodicoses in dermatologic consultations (although they are under-diagnosed). (6) The acaricidal effect of six topical treatments on Demodex was compared in vivo and the best molecules were used for about 20 years in our practice. From data collected from our patients during this time period, the efficacy of the treatment was demonstrated, not only on Demodex density but also on c, Doctorat en Sciences médicales (Médecine), info:eu-repo/semantics/nonPublished
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- 2021
31. Longitudinal study based on a safety registry for malaria patients treated with artenimol–piperaquine in six European countries
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Vignier, Nicolas, Bouchaud, Olivier, Angheben, Andrea, Bottieau, Emmanuel, Calleri, Guido, Salas-Coronas, Joaquín, Martin, Charlotte, Ramos, José Manuel, Mechain, Matthieu, Rapp, Christophe, Nothdurft, Hans Dieter, Velasco, Maria, Bardají, Azucena, Rojo-Marcos, Gerardo, Visser, Leo L.G., Hatz, Christoph, Bisoffi, Zeno, Jelinek, Tomas, Duparc, Stephan, Bourhis, Yann, Tommasini, Silva, Iannucelli, Maurizio, Bacchieri, Antonella, Mattera, Giovan Giuseppe, Merlo Pich, Emilio, Behrens, Ronald R.H., Vignier, Nicolas, Bouchaud, Olivier, Angheben, Andrea, Bottieau, Emmanuel, Calleri, Guido, Salas-Coronas, Joaquín, Martin, Charlotte, Ramos, José Manuel, Mechain, Matthieu, Rapp, Christophe, Nothdurft, Hans Dieter, Velasco, Maria, Bardají, Azucena, Rojo-Marcos, Gerardo, Visser, Leo L.G., Hatz, Christoph, Bisoffi, Zeno, Jelinek, Tomas, Duparc, Stephan, Bourhis, Yann, Tommasini, Silva, Iannucelli, Maurizio, Bacchieri, Antonella, Mattera, Giovan Giuseppe, Merlo Pich, Emilio, and Behrens, Ronald R.H.
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Background: European travellers to endemic countries are at risk of malaria and may be affected by a different range of co-morbidities than natives of endemic regions. The safety profile, especially cardiac issues, of artenimol (previously dihydroartemisinin)–piperaquine (APQ) Eurartesim® during treatment of uncomplicated imported falciparum malaria is not adequately described due to the lack of longitudinal studies in this population. The present study was conducted to partially fill this gap. Methods: Participants were recruited through Health Care Provider’s safety registry in 15 centres across 6 European countries in the period 2013–2016. Adverse events (AE) were collected, with a special focus on cardiovascular safety by including electrocardiogram QT intervals evaluated after correction with either Bazett’s (QTcB) or Fridericia’s (QTcF) methods, at baseline and after treatment. QTcB and/or QTcF prolongation were defined by a value > 450 ms for males and children and > 470 ms for females. Results: Among 294 participants, 30.3% were women, 13.7% of Caucasian origin, 13.5% were current smoker, 13.6% current alcohol consumer and 42.2% declared at least one illness history. The mean (SD) age and body mass index were 39.8 years old (13.2) and 25.9 kg/m2 (4.7). Among them, 75 reported a total of 129 AE (27 serious), 46 being suspected to be related to APQ (11 serious) and mostly labelled as due to haematological, gastrointestinal, or infection. Women and Non-African participants had significantly (p < 0.05) more AEs. Among AEs, 21 were due to cardiotoxicity (7.1%), mostly QT prolongation, while 6 were due to neurotoxicity (2.0%), mostly dizziness. Using QTcF correction, QT prolongation was observed in 17/143 participants (11.9%), only 2 of them reporting QTcF > 500 ms (milliseconds) but no clinical symptoms. Using QTcB correction increases of > 60 ms were present in 9 participants (6.3%). A trend towards increased prolongation was observed in those over 65 years of a, SCOPUS: ar.j, info:eu-repo/semantics/published
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- 2021
32. SARS-CoV-2 genomic characterization and clinical manifestation of the COVID-19 outbreak in Uruguay
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Elizondo, Victoria, Harkins, Gordon William, Mabvakure, Batsirai, Smidt, Sabine, Zappile, Paul, Marier, Christian, Maurano, Matthew M.T., Perez, Victoria, Mazza, Natalia, Beloso, Carolina, Ifran, Silvana, Fernandez, Mariana, Santini, Andrea, Perez, Veronica, Estevez, Veronica, Nin, Matilde, Manrique, Gonzalo, Perez, Leticia, Ross, Fabiana, Boschi, Susana, Zubillaga, Maria Noel, Balleste, Raquel, Dellicour, Simon, Heguy, Adriana, Duerr, Ralf, Elizondo, Victoria, Harkins, Gordon William, Mabvakure, Batsirai, Smidt, Sabine, Zappile, Paul, Marier, Christian, Maurano, Matthew M.T., Perez, Victoria, Mazza, Natalia, Beloso, Carolina, Ifran, Silvana, Fernandez, Mariana, Santini, Andrea, Perez, Veronica, Estevez, Veronica, Nin, Matilde, Manrique, Gonzalo, Perez, Leticia, Ross, Fabiana, Boschi, Susana, Zubillaga, Maria Noel, Balleste, Raquel, Dellicour, Simon, Heguy, Adriana, and Duerr, Ralf
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COVID-19 is a respiratory illness caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and declared by the World Health Organization a global public health emergency. Among the severe outbreaks across South America, Uruguay has become known for curtailing SARS-CoV-2 exceptionally well. To understand the SARS-CoV-2 introductions, local transmissions, and associations with genomic and clinical parameters in Uruguay, we sequenced the viral genomes of 44 outpatients and inpatients in a private healthcare system in its capital, Montevideo, from March to May 2020. We performed a phylogeographic analysis using sequences from our cohort and other studies that indicate a minimum of 23 independent introductions into Uruguay, resulting in five major transmission clusters. Our data suggest that most introductions resulting in chains of transmission originate from other South American countries, with the earliest seeding of the virus in late February 2020, weeks before the borders were closed to all non-citizens and a partial lockdown implemented. Genetic analyses suggest a dominance of S and G clades (G, GH, GR) that make up >90% of the viral strains in our study. In our cohort, lethal outcome of SARS-CoV-2 infection significantly correlated with arterial hypertension, kidney failure, and ICU admission (FDR < 0.01), but not with any mutation in a structural or non-structural protein, such as the spike D614G mutation. Our study contributes genetic, phylodynamic, and clinical correlation data about the exceptionally well-curbed SARS-CoV-2 outbreak in Uruguay, which furthers the understanding of disease patterns and regional aspects of the pandemic in Latin America., SCOPUS: ar.j, info:eu-repo/semantics/published
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- 2021
33. Early post-prandial regulation of protein expression in the midgut of chagas disease vector rhodnius prolixus highlights new potential targets for vector control strategy
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Ouali, Radouane, Vieira, Larissa Rezende, Salmon, Didier, Bousbata, Sabrina, Ouali, Radouane, Vieira, Larissa Rezende, Salmon, Didier, and Bousbata, Sabrina
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Chagas disease is a vector-borne parasitic disease caused by the flagellated protozoan Trypanosoma cruzi and transmitted to humans by a large group of bloodsucking triatomine bugs. Triatomine insects, such as Rhodnius prolixus, ingest a huge amount of blood in a single meal. Their midgut represents an important interface for triatomine–trypanosome interactions. Furthermore, the development of parasites and their vectorial transmission are closely linked to the blood feeding and digestion; thus, an understanding of their physiology is essential for the development of new strategies to control triatomines. In this study, we used label-free quantitative proteomics to identify and analyze the early effect of blood feeding on protein expression in the midgut of Rhodnius prolixus. We both identified and quantified 124 proteins in the anterior midgut (AM) and 40 in the posterior midgut (PM), which vary significantly 6 h after feeding. The detailed analysis of these proteins revealed their predominant involvement in the primary function of hematophagy, including proteases, proteases inhibitors, amino acids metabolism, primary metabolites processing, and protein folding. Interestingly, our proteomics data show a potential role of the AM in protein digestion. Moreover, proteins related to detoxification processes and innate immunity, which are largely accepted to be triggered by blood ingestion, were mildly modulated. Surprisingly, one third of blood-regulated proteins in the AM have unknown function. This work contributes to the improvement of knowledge on the digestive physiology of triatomines in the early hours post-feeding. It provides key information for selecting new putative targets for the development of triatomine control tools and their potential role in the vector competence, which could be applied to other vector species., SCOPUS: ar.j, info:eu-repo/semantics/published
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- 2021
34. Assessing field performance of ultrasensitive rapid diagnostic tests for malaria: a systematic review and meta-analysis
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Danwang, Celestin, Kirakoya, Fati, Samadoulougou, Sekou, Danwang, Celestin, Kirakoya, Fati, and Samadoulougou, Sekou
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Background: To overcome the limitations of conventional malaria rapid diagnostic tests (cRDTs) in diagnosing malaria in patients with low parasitaemia, ultrasensitive malaria rapid diagnostic tests (uRDTs) have recently been developed, with promising results under laboratory conditions. The current study is the first meta-analysis comparing the overall sensitivity, and specificity of newly developed ultrasensitive Plasmodium falciparum malaria RDT (Alere™ Ultra-sensitive Malaria Ag P. falciparum RDT) with the cRDT conducted in the same field conditions. Methods: PubMed, EMBASE, Cochrane infectious diseases group specialized register, and African Journals Online (AJOL) were searched up to 20th April 2021. Studies with enough data to compute sensitivity and specificity of uRDT and cRDT were retrieved. A random-effect model for meta-analysis was used to obtain the pooled sensitivity and specificity. Results: Overall, 15 data sets from 14 studies were included in the meta-analysis. The overall sensitivity of the Alere™ ultra-sensitive Malaria Ag P. falciparum RDT regardless of the reference test and the clinical presentation of participants, was 55.5% (95% confidence interval [CI]: 45.5; 65.0), while the sensitivity regardless of the reference test and the clinical presentation of participants, was 42.9% (95% CI: 31.5; 55.2) for the cRDT performed in the same field conditions. When PCR was used as reference test, the sensitivity of uRDT was 60.4% (95% CI: 50.8; 69.2), while the sensitivity was 49.4% (95% CI: 38.2; 60.6) for the cRDT. The pooled specificity of uRDT regardless of the reference test and the clinical presentation of participants was 98.6% (95% CI: 97.1; 99.4), and the pooled specificity of cRDT regardless of the reference test and the clinical presentation of participants was 99.3% (95% CI: 98.1; 99.7). When PCR was used as reference test the specificity of uRDT and cRDT was 97.5% (95% CI: 94.1; 98.9) and 98.2% (95% CI: 95.5; 99.3). Regardless of the refere, SCOPUS: ar.j, info:eu-repo/semantics/published
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- 2021
35. Dispersal dynamics of SARS-CoV-2 lineages during the first epidemic wave in New York City
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Dellicour, Simon, Hong, Samuel S.L., Vrancken, Bram, Chaillon, Antoine, Gill, Mandev M.S., Maurano, Matthew M.T., Ramaswami, Sitharam, Zappile, Paul, Marier, Christian, Harkins, Gordon William, Baele, Guy, Duerr, Ralf, Heguy, Adriana, Dellicour, Simon, Hong, Samuel S.L., Vrancken, Bram, Chaillon, Antoine, Gill, Mandev M.S., Maurano, Matthew M.T., Ramaswami, Sitharam, Zappile, Paul, Marier, Christian, Harkins, Gordon William, Baele, Guy, Duerr, Ralf, and Heguy, Adriana
- Abstract
During the first phase of the COVID-19 epidemic, New York City rapidly became the epicenter of the pandemic in the United States. While molecular phylogenetic analyses have previously highlighted multiple introductions and a period of cryptic community transmission within New York City, little is known about the circulation of SARS-CoV-2 within and among its boroughs. We here perform phylogeographic investigations to gain insights into the circulation of viral lineages during the first months of the New York City outbreak. Our analyses describe the dispersal dynamics of viral lineages at the state and city levels, illustrating that peripheral samples likely correspond to distinct dispersal events originating from the main metropolitan city areas. In line with the high prevalence recorded in this area, our results highlight the relatively important role of the borough of Queens as a transmission hub associated with higher local circulation and dispersal of viral lineages toward the surrounding boroughs., SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2021
36. Évaluation du risque dans la maladie du sommeil : apport de la modélisation mathématique
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Gouteux J.P.
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trypanosomose ,risque ,glossine ,tsé-tsé ,indice entomologique ,parasitologie ,épidémiologie ,modèles mathématiques ,Infectious and parasitic diseases ,RC109-216 - Abstract
Le concept de “risque” est important en épidémiologie, mais il est souvent utilisé de manière confuse pour la maladie du sommeil. Une approche rigoureuse issue de la modélisation mathématique est utilisée pour proposer et discuter de nouveaux indicateurs du risque entomologique virtuel et du risque parasitologique réel, dérivés du taux de reproduction R0.
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- 2005
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37. Integration of Human African Trypanosomiasis Control Activities into Primary Healthcare Services: A Scoping Review
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Marleen Boelaert, Oscar Numbi Luboya, Pascal Lutumba, Yves Coppieters, Philippe Mulenga, Crispin Lumbala, Abdon Mukalay, and Faustin Chenge
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medicine.medical_specialty ,Knowledge management ,Process (engineering) ,030231 tropical medicine ,Control (management) ,Virologie générale ,03 medical and health sciences ,0302 clinical medicine ,Documentation ,Virology ,parasitic diseases ,medicine ,Humans ,African trypanosomiasis ,Disease Eradication ,Pathologie maladies infectieuses ,Parasitologie ,business.industry ,Quality of service ,Public health ,Trypanosomiasis, African -- prevention & control ,Virologie médicale ,Articles ,Grey literature ,Health Services ,medicine.disease ,Trypanosomiasis, African ,Infectious Diseases ,Sustainability ,Parasitology ,Public Health ,Business - Abstract
Human African trypanosomiasis (HAT) also known as sleeping sickness is targeted for elimination as a public health problem by 2020 and elimination of infection by 2030. Although the number of reported cases is decreasing globally, integration of HAT control activities into primary healthcare services is endorsed to expand surveillance and control. However, this integration process faces several challenges in the field. This literature review analyzes what is known about integrated HAT control to guide the integration process in an era of HAT elimination. We carried out a scoping review by searching PubMed and Google Scholar data bases as well as gray literature documents resulting in 25 documents included for analysis. The main reasons in favor to integrate HAT control were related to coverage, cost, quality of service, or sustainability. There were three categories of factors influencing the integration process: 1) the clinical evolution of HAT, 2) the organization of health services, and 3) the diagnostic and therapeutic tools. There is a consensus that both active and passive approaches to HAT case detection and surveillance need to be combined, in a context-sensitive way. However, apart from some documentation about the constraints faced by local health services, there is little evidence on how this synergy is best achieved., SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2019
38. Evolution des parasites: Exemples parmi les Nématodes et les crustacés
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Audebert, Fabienne, Biologie des Organismes et Ecosystèmes Aquatiques (BOREA), Université de Caen Normandie (UNICAEN), Normandie Université (NU)-Normandie Université (NU)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA), Sorbonne Université, and Julien Gasparini
- Subjects
Parasitologie ,cycle de vie ,Evolution ,Parasitology Research ,life cycle ,Systématique ,[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/Parasitology - Abstract
My research topics concern the evolution of parasites and their adaptations to their hosts. To do so, I study two models: one terrestrial model, the nematode Trichostrongylina in vertebrates, and an aquatic model, the cirriped Rhizocephala in crabs. The nematode / vertebrate model allowed me to highlight the relay role of lagomorph hosts in the evolution of Trichostrongylina through a detailed study of life cycles, morphogenesis, and adult morphology. At Pierre and Marie Curie University, in the Computer and Systematic Laboratory (LIS) directed by Prof. Régine Vignes-Lebbe in 2004, I became interested in the morphological characters and taxonomy of Trichostrongylina. I proposed and constructed a database for the digital identification of these nematode parasites of lagomorphs using the Xper software developed by the team, while continuing to work on life cycles. In 2014, I made a thematic shift when I joined the BOREA laboratory, in a team led by Prof. Philippe Keith, in which I started the study of the marine model, Sacculina in crabs. It is on this subject that I co-supervised the PhD thesis of Fabien Trédez with Dr Nicolas Rabet (HDR) from 2012 to 2015. We worked on the larval development of Sacculina carcini, a parasite of the green crab Carcinus maenas, which allowed us to identify a new nauplius larval stage, thanks to very precise monitoring of the life cycle. We also demonstrated synchronism in egg-laying, a phenomenon explained by synchronous cell division. At the same time, I remain interested in the systematics and phylogeny of Trichostrongylina and Rhizocephala. This led me to describe new nematode species in particular and to research phylogenetic relationships, particularly from molecular data. Molecular data in Rhizocephala are often the only means to discriminate between species and this work allows us to test the true host specificity in Sacculins. In the future, I wish to develop my research on the Sacculin model, in particular on the chemical communication between the parasite and its host, and I wish to study the coevolution between the host and the parasite on Sacculins but also with new aquatic models like Monogens or Myxosporea and fish.; Mon sujet de recherche porte sur l'évolution des parasites et de leur adaptation chez l’hôte. Pour ce faire, j’étudie deux modèles : l’un terrestre, le modèle nématode Trichostrongylina / Vertébré, l’autre aquatique le modèle cirripède Rhizocephala / crabe. L’étude du modèle nématode / vertébré m’a permis de mettre en évidence le rôle relais des hôtes lagomorphes dans l’évolution des Trichostrongylina à travers une étude détaillée des cycles de vie et de la morphogénèse, mais aussi de la morphologie des adultes. Recrutée à l’université Pierre et Marie Curie, au Laboratoire Informatique et Systématique (LIS) dirigé par le Pr Régine Vignes-Lebbe en 2004, je me suis intéressée aux caractères morphologiques et à la taxinomie des Trichostrongylina. J’ai ainsi proposé une base d’identification numérique de ces nématodes, parasites de lagomorphes, à l’aide du logiciel Xper, développé par l’équipe, tout en continuant à travailler sur les cycles de vie. En 2014, j’ai fait une reconversion thématique à mon arrivée dans l’UMR BOREA, équipe dirigée par le Pr Philippe Keith, dans laquelle j’ai débuté une étude sur un second modèle aquatique marin : la sacculine et le crabe. C'est dans cette thématique que j'ai co-encadré avec le Dr Nicolas Rabet (HDR) de 2012 à 2015, la thèse de Fabien Trédez. Nous avons travaillé sur le développement larvaire de la sacculine Sacculina carcini, parasite du crabe vert Carcinus maenas ce qui nous a permis d’identifier un nouveau stade nauplius, grâce à un suivi très précis du cycle de vie, mais aussi de montrer un synchronisme dans les pontes, phénomène expliqué par une division cellulaire synchrone. Parallèlement, je m'intéresse à la systématique et la phylogénie des Trichostrongylina et des Rhizocephala. J’ai ainsi décrit plusieurs nouvelles espèces chez les nématodes en particulier et chercher à résoudre les relations phylogénétiques entre elles, à partir de données moléculaires. Chez les rhizocéphales, les données moléculaires, sont parfois les seules données permettant de discriminer des espèces entre elles en effet les caractères morphologiques sont souvent peu discriminants. Dans un futur proche, je souhaite continuer à développer mes recherches sur le modèle sacculine, en particulier sur la communication chimique entre le parasite et son hôte. Je vise aussi à continuer d’étudier la coévolution entre l’hôte et le parasite sur le modèle sacculine mais également avec de nouveaux modèles aquatiques comme les Monogènes ou les Myxosporea et les poissons.
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- 2021
39. Early Post-Prandial Regulation of Protein Expression in the Midgut of Chagas Disease Vector Rhodnius prolixus Highlights New Potential Targets for Vector Control Strategy
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Didier Salmon, Radouane Ouali, Larissa Rezende Vieira, and Sabrina Bousbata
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0301 basic medicine ,Microbiology (medical) ,Chagas disease ,Proteases ,hematophagy ,Hematophagy ,Protein digestion ,030231 tropical medicine ,Sciences de la matière vivante ,vector control ,Biophysique ,Microbiology ,Article ,label-free shotgun ,Rhodnius prolixus ,03 medical and health sciences ,0302 clinical medicine ,Virology ,parasitic diseases ,medicine ,Trypanosoma cruzi ,lcsh:QH301-705.5 ,chagas disease ,Parasitologie ,biology ,Agronomie générale ,fungi ,Label-free shotgun ,Midgut ,biology.organism_classification ,medicine.disease ,Technologie brassicole ,Vector control ,Cell biology ,030104 developmental biology ,lcsh:Biology (General) ,Vector (epidemiology) ,Biologie - Abstract
Chagas disease is a vector-borne parasitic disease caused by the flagellated protozoan Trypanosoma cruzi and transmitted to humans by a large group of bloodsucking triatomine bugs. Triatomine insects, such as Rhodnius prolixus, ingest a huge amount of blood in a single meal. Their midgut represents an important interface for triatomine–trypanosome interactions. Furthermore, the development of parasites and their vectorial transmission are closely linked to the blood feeding and digestion; thus, an understanding of their physiology is essential for the development of new strategies to control triatomines. In this study, we used label-free quantitative proteomics to identify and analyze the early effect of blood feeding on protein expression in the midgut of Rhodnius prolixus. We both identified and quantified 124 proteins in the anterior midgut (AM) and 40 in the posterior midgut (PM), which vary significantly 6 h after feeding. The detailed analysis of these proteins revealed their predominant involvement in the primary function of hematophagy, including proteases, proteases inhibitors, amino acids metabolism, primary metabolites processing, and protein folding. Interestingly, our proteomics data show a potential role of the AM in protein digestion. Moreover, proteins related to detoxification processes and innate immunity, which are largely accepted to be triggered by blood ingestion, were mildly modulated. Surprisingly, one third of blood-regulated proteins in the AM have unknown function. This work contributes to the improvement of knowledge on the digestive physiology of triatomines in the early hours post-feeding. It provides key information for selecting new putative targets for the development of triatomine control tools and their potential role in the vector competence, which could be applied to other vector species., SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2021
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40. The Pathogenic Role of Demodex Mites in Rosacea: A Potential Therapeutic Target Already in Erythematotelangiectatic Rosacea?
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Forton, Fabienne M.N. and Forton, Fabienne M.N.
- Abstract
info:eu-repo/semantics/published
- Published
- 2020
41. A comparative study of parasites in three latrines from Medieval and Renaissance Brussels, Belgium (14th-17th centuries)
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Graff, Anna, Bennion-Pedley, Emma, Jones, Ariadin A.K., Ledger, Marissa M.L., Deforce, Koen, Degraeve, Ann, Byl, Sylvie, Mitchell, Piers P.D., Graff, Anna, Bennion-Pedley, Emma, Jones, Ariadin A.K., Ledger, Marissa M.L., Deforce, Koen, Degraeve, Ann, Byl, Sylvie, and Mitchell, Piers P.D.
- Abstract
The aim of this study is to determine the species of parasite that infected the population of Brussels during the Medieval and Renaissance periods, and determine if there was notable variation between different households within the city. We compared multiple sediment layers from cesspits beneath three different latrines dating from 14th-17th centuries. Helminths and protozoa were detected using microscopy and enzyme-linked immunosorbent assay (ELISA). We identified Ascaris sp. Capillaria sp. Dicrocoelium dendriticum, Entamoeba histolytica, Fasciola hepatica, Giardia duodenalis, Taenia sp. and Trichuris sp. in Medieval samples, and continuing presence of Ascaris sp. D. dendriticum, F. hepatica, G. duodenalis and Trichuris sp. into the Renaissance. While some variation existed between households, there was a broadly consistent pattern with the domination of species spread by faecal contamination of food and drink (whipworm, roundworm, and protozoa that cause dysentery). These data allow us to explore diet and hygiene, together with routes for spread of fecal-oral parasites. Key factors explaining our findings are manuring practices with human excrement in market gardens, and flooding of the polluted River Senne during the 14th-17th centuries., SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2020
42. Disclosing the Interactome of Leukemogenic NUP98-HOXA9 and SET-NUP214 Fusion Proteins Using a Proteomic Approach.
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Mendes, Adélia, Juhlen, Ramona Gabriele, Bousbata, Sabrina, Fahrenkrog, Birthe, Mendes, Adélia, Juhlen, Ramona Gabriele, Bousbata, Sabrina, and Fahrenkrog, Birthe
- Abstract
The interaction of oncogenes with cellular proteins is a major determinant of cellular transformation. The NUP98-HOXA9 and SET-NUP214 chimeras result from recurrent chromosomal translocations in acute leukemia. Functionally, the two fusion proteins inhibit nuclear export and interact with epigenetic regulators. The full interactome of NUP98-HOXA9 and SET-NUP214 is currently unknown. We used proximity-dependent biotin identification (BioID) to study the landscape of the NUP98-HOXA9 and SET-NUP214 environments. Our results suggest that both fusion proteins interact with major regulators of RNA processing, with translation-associated proteins, and that both chimeras perturb the transcriptional program of the tumor suppressor p53. Other cellular processes appear to be distinctively affected by the particular fusion protein. NUP98-HOXA9 likely perturbs Wnt, MAPK, and estrogen receptor (ER) signaling pathways, as well as the cytoskeleton, the latter likely due to its interaction with the nuclear export receptor CRM1. Conversely, mitochondrial proteins and metabolic regulators are significantly overrepresented in the SET-NUP214 proximal interactome. Our study provides new clues on the mechanistic actions of nucleoporin fusion proteins and might be of particular relevance in the search for new druggable targets for the treatment of nucleoporin-related leukemia., SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2020
43. Genomic surveillance of Yellow fever virus epizootic in São Paulo, Brazil, 2016-2018
- Author
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Hill, Sarah Catherine, de Souza, Renato, Thézé, Julien, Claro, Ingra Morales, Aguiar, Renato Santana, Abade, Leandro, Santos, Fabiana Cristina Pereira Dos F.C.P., Cunha, Mariana Sequetin, Nogueira, Juliana Silva, Salles, Flavia F.C.S., Rocco, Iray Maria, Maeda, Adriana Yurika, Vasami, Fernanda Gisele Silva, du Plessis, Louis, Silveira, Paola Paz, de Jesus, Jaqueline Goes, Quick, Joshua, Fernandes, Natália N.C.C.A., Guerra, Juliana Mariotti, Réssio, Rodrigo Albergaria, Giovanetti, Marta, Alcantara, Luiz Carlos L.C.J., Cirqueira, Cinthya Dos Santos C.S., Díaz-Delgado, Josué, Macedo, Fernando Luiz Lima, Timenetsky, Maria Do Carmo Sampaio Tavares Timenetsky M.d.C.S.T., de Paula, Regiane, Spinola, Roberta, Telles de Deus, Juliana, Mucci, Luís Filipe, Tubaki, Rosa Maria, de Menezes, Regiane María Tironi, Ramos, Patrícia Locosque, de Abreu, André Luiz, Cruz, Laura Nogueira, Loman, Nick, Dellicour, Simon, Pybus, Oliver George, Sabino, Ester Cerdeira, Faria, Nuno Rodrigues, Hill, Sarah Catherine, de Souza, Renato, Thézé, Julien, Claro, Ingra Morales, Aguiar, Renato Santana, Abade, Leandro, Santos, Fabiana Cristina Pereira Dos F.C.P., Cunha, Mariana Sequetin, Nogueira, Juliana Silva, Salles, Flavia F.C.S., Rocco, Iray Maria, Maeda, Adriana Yurika, Vasami, Fernanda Gisele Silva, du Plessis, Louis, Silveira, Paola Paz, de Jesus, Jaqueline Goes, Quick, Joshua, Fernandes, Natália N.C.C.A., Guerra, Juliana Mariotti, Réssio, Rodrigo Albergaria, Giovanetti, Marta, Alcantara, Luiz Carlos L.C.J., Cirqueira, Cinthya Dos Santos C.S., Díaz-Delgado, Josué, Macedo, Fernando Luiz Lima, Timenetsky, Maria Do Carmo Sampaio Tavares Timenetsky M.d.C.S.T., de Paula, Regiane, Spinola, Roberta, Telles de Deus, Juliana, Mucci, Luís Filipe, Tubaki, Rosa Maria, de Menezes, Regiane María Tironi, Ramos, Patrícia Locosque, de Abreu, André Luiz, Cruz, Laura Nogueira, Loman, Nick, Dellicour, Simon, Pybus, Oliver George, Sabino, Ester Cerdeira, and Faria, Nuno Rodrigues
- Abstract
São Paulo, a densely inhabited state in southeast Brazil that contains the fourth most populated city in the world, recently experienced its largest yellow fever virus (YFV) outbreak in decades. YFV does not normally circulate extensively in São Paulo, so most people were unvaccinated when the outbreak began. Surveillance in non-human primates (NHPs) is important for determining the magnitude and geographic extent of an epizootic, thereby helping to evaluate the risk of YFV spillover to humans. Data from infected NHPs can give more accurate insights into YFV spread than when using data from human cases alone. To contextualise human cases, identify epizootic foci and uncover the rate and direction of YFV spread in São Paulo, we generated and analysed virus genomic data and epizootic case data from NHPs in São Paulo. We report the occurrence of three spatiotemporally distinct phases of the outbreak in São Paulo prior to February 2018. We generated 51 new virus genomes from YFV positive cases identified in 23 different municipalities in São Paulo, mostly sampled from NHPs between October 2016 and January 2018. Although we observe substantial heterogeneity in lineage dispersal velocities between phylogenetic branches, continuous phylogeographic analyses of generated YFV genomes suggest that YFV lineages spread in São Paulo at a mean rate of approximately 1km per day during all phases of the outbreak. Viral lineages from the first epizootic phase in northern São Paulo subsequently dispersed towards the south of the state to cause the second and third epizootic phases there. This alters our understanding of how YFV was introduced into the densely populated south of São Paulo state. Our results shed light on the sylvatic transmission of YFV in highly fragmented forested regions in São Paulo state and highlight the importance of continued surveillance of zoonotic pathogens in sentinel species., SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2020
44. High-Throughput Identification of the Rhodnius prolixus Midgut Proteome Unravels a Sophisticated Hematophagic Machinery
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Ouali, Radouane, De Brito, Karen Caroline Valentim, Salmon, Didier S.D., Bousbata, Sabrina, Ouali, Radouane, De Brito, Karen Caroline Valentim, Salmon, Didier S.D., and Bousbata, Sabrina
- Abstract
Chagas disease is one of the most common parasitic infections in Latin America, which istransmitted by hematophagous triatomine bugs, of which Rhodnius prolixus is the vector prototype forthe study of this disease. The protozoan parasite Trypanosoma cruzi, the etiologic agent of this disease,is transmitted by the vector to humans through the bite wound or mucosa. The passage of the parasitethrough the digestive tract of its vector constitutes a key step in its developmental cycle. Herewith,by a using high-throughput proteomic tool in order to characterize the midgut proteome of R. prolixus,we describe a set of functional groups of proteins, as well as the biological processes in which theyare involved. This is the first proteomic analysis showing an elaborated hematophagy machineryinvolved in the digestion of blood, among which, several families of proteases have been characterized.The evaluation of the activity of cathepsin D proteases in the anterior part of the digestive tract ofthe insect suggested the existence of a proteolytic activity within this compartment, suggesting thatdigestion occurs early in this compartment. Moreover, several heat shock proteins, blood clottinginhibitors, and a powerful antioxidant enzyme machinery against reactive oxygen species (ROS) andcell detoxification have been identified. Highlighting the complexity and importance of the digestivephysiology of insects could be a starting point for the selection of new targets for innovative controlstrategies of Chagas disease., info:eu-repo/semantics/published
- Published
- 2020
45. Building skills and resources for genomics, epigenetics, and bioinformatics research for Africa: Report of the joint 11th conference of the african society of human genetics and 12th H3 Africa consortium, 2018
- Author
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Musanabaganwa, Clarisse, Mihigo, Bonaventure, Tumusime, Robert, Uwanyirigira, Mediatrice, Da Rocha, Jorge, Hayat, Mahtaab, Govender, Melanie, Buto, Peace, Nyunga, Tina, Ramesar, Raj RS, Rotimi, Charles, Souopgui, Jacob, Wonkam, Ambroise, Williams, Scott M, Jansen, Stefan, Ramsay, Michèle, Mutesa, Léon, Musanabaganwa, Clarisse, Mihigo, Bonaventure, Tumusime, Robert, Uwanyirigira, Mediatrice, Da Rocha, Jorge, Hayat, Mahtaab, Govender, Melanie, Buto, Peace, Nyunga, Tina, Ramesar, Raj RS, Rotimi, Charles, Souopgui, Jacob, Wonkam, Ambroise, Williams, Scott M, Jansen, Stefan, Ramsay, Michèle, and Mutesa, Léon
- Abstract
The 11th Congress of the African Society of Human Genetics (AfSHG) was held from September 16, 2018 to September 21, 2018, in conjunction with the 12th Human Heredity and Health in Africa (H3Africa) Consortium meeting in Kigali, Rwanda. The event was organized by the AfSHG in partnership with the Rwanda Society of Human Genetics and the University of Rwanda. A 2-day workshop on the application of next-generation sequencing technologies for analyzing monogenic disease in African populations was organized as part of the conference (September 22, 2018-September 23, 2018, Kigali, Rwanda). The theme of the conference was "Building skills and resources for genomics, epigenetics and bioinformatics research for Africa."The conference served as a platform to bring together members from country-specific Societies of Human Genetics, including Rwanda, Cameroon, Democratic Republic of Congo, Egypt, Mali, Senegal, and South Africa, and included 435 delegates from 38 countries, including 29 African countries that attended the conference. A major topic of discussion was how to bridge the gap between the emerging knowledge on genomics and Omics in African populations. The importance of understanding the role of genetic variation in disease causation and susceptibility among Africans was a constant theme during the meeting, as was the need to develop research infrastructure and resources to enhance healthcare systems, so that they are not left behind in the genomic revolution. It was concluded that there is a need to inspire more African scientists to train and work as investigators, clinicians, and genetic counselors in the field of human genetics in Africa. Local investments, and South-South and South-North collaboration were identified as the key drivers for the successful implementation of research and development on the continent., SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2020
46. In vivo/ex vivo efficacy of artemether-lumefantrine and artesunate-amodiaquine as first-line treatment for uncomplicated falciparum malaria in children: An open label randomized controlled trial in Burkina Faso
- Author
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Lingani, Moussa, Bonkian, Léa Nadège, Yerbanga, Isidore IW, Kazienga, Adama, Valéa, Innocent, Sorgho, Hermann, Ouédraogo, Jean Bosco, Mens, Petronella Francisca, Schallig, Henk D F H HDFH, Ravinetto, Raffaella, D'Alessandro, Umberto, Tinto, Halidou, Lingani, Moussa, Bonkian, Léa Nadège, Yerbanga, Isidore IW, Kazienga, Adama, Valéa, Innocent, Sorgho, Hermann, Ouédraogo, Jean Bosco, Mens, Petronella Francisca, Schallig, Henk D F H HDFH, Ravinetto, Raffaella, D'Alessandro, Umberto, and Tinto, Halidou
- Abstract
Background: Artemisinin-based combination therapy (ACT) is recommended to improve malaria treatment efficacy and limit drug-resistant parasites selection in malaria endemic areas. 5 years after they were adopted, the efficacy and safety of artemether-lumefantrine (AL) and artesunate-amodiaquine (ASAQ), the first-line treatments for uncomplicated malaria were assessed in Burkina Faso. Methods: In total, 440 children with uncomplicated Plasmodium falciparum malaria were randomized to receive either AL or ASAQ for 3 days and were followed up weekly for 42 days. Blood samples were collected to investigate the ex vivo susceptibility of P. falciparum isolates to lumefantrine, dihydroartemisinin (the active metabolite of artemisinin derivatives) and monodesethylamodiaquine (the active metabolite of amodiaquine). The modified isotopic micro test technique was used to determine the 50% inhibitory concentration (IC50) values. Primary endpoints were the risks of treatment failure at days 42. Results: Out of the 440 patients enrolled, 420 (95.5%) completed the 42 days follow up. The results showed a significantly higher PCR unadjusted cure rate in ASAQ arm (71.0%) than that in the AL arm (49.8%) on day 42, and this trend was similar after correction by PCR, with ASAQ performing better (98.1%) than AL (91.1%). Overall adverse events incidence was low and not significantly different between the two treatment arms. Ex vivo results showed that 6.4% P. falciparum isolates were resistant to monodesthylamodiaquine. The coupled in vivo/ex vivo analysis showed increased IC50 values for lumefantrine and monodesethylamodiaquine at day of recurrent parasitaemia compared to baseline values while for artesunate, IC50 values remained stable at baseline and after treatment failure (p > 0.05). Conclusion: These findings provide substantial evidence that AL and ASAQ are highly efficacious for the treatment of uncomplicated malaria in children in Burkina Faso. However, the result of P. falciparum, SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2020
47. Untersuchungen zur O-GlcNAc Modifikation von Plasmodium falciparum dem Erreger der Malaria tropica
- Author
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Kupferschmid, Mattis and Schwarz, Ralph T. (Prof.)
- Subjects
Proteomics ,Parasitologie ,Proteomanalyse ,HPAEC ,Posttranslationale ��nderung ,α-Tubulin ,N-Acetylglucosamin ,Glykosylierung ,O-GlcNAcylation ,Plasmodium falciparum ,O-GlcNAcylierung ,Medizin ,O-GlcNAc ,Glykobiologie ,Parasitäre Krankheit ,Posttranslationale Änderung ,Malaria ,Glycolysis ,Posttranslationale Modifikation ,Hsp7 ,Medical sciences Medicine ,��-Tubulin ,Parasit��re Krankheit ,parasitic diseases ,ddc:610 - Abstract
Background: Despite the huge and in parts very successfull global effort to eradicate malaria, it still is one of the most deadly infectious diseases. Therefore Plasmodium falciparum the disease causing parasite is a major target of medical research. Post-translational modifications (PTMs) constitute a huge group of chemical modifications that increase the complexity of the proteomes of living beings. PTMs have been discussed as potential anti-malarial drug targets due to their involvement in many cell processes. O-GlcNAcylation is a widespread PTM found in different organisms including P.falciparum. The aim of this study was to identify O-GlcNAcylated proteins of P. falciparum, to learn more about such modification process and to predict its possible funcional role in the Apicomplexans. Methods: The P. falciparum strain 3D7 was cultivated in erythrocytes, purified and the proteome checked for the O-GlcNAc-modification by using different methods. The level of UDP-GlcNAc, the donor of the sugar moiety for O-GlcNAcylation processes, was measured using high performance anion exchange chromatography (HPAEC). O-GlcNAcylated proteins were enriched and purified utilizing either click chemistry labelling or adsorption on succinyl-wheat germ agglutinin beads. Proteins were then identified by mass-spectrometry (nano-LC MS/MS). Results: While low, when compared to MRC-5 control cells, P. falciparum possesses its own pool of UDP-GlcNAc. By using proteomics methods, 13 O-GlcNAcylated proteins were unambiguously identified in late trophozoites (11 by click-chemistry and 6 by sWGA-beads enrichment; 4 being identified by the two approaches). These proteins are all part of pathways, functions and structures important for the parasite survival. By probing ���clicked��� proteins using specific antibodies the heat shock protein (Hsp)70 and alpha-tubulin were identified as P. falciparum O-GlcNAc-bearing proteins. Cultivation of P. falciparum in presence of an inhibitor for the O-GlcNAc catalysis reduced the parasite growth. However the interaction effect was not significant. Conclusion: This is the first study exploring the O-GlcNAcylated proteins in P.falciparum. While the parasite O-GlcNAcome seems to be close to those of other species, the structural differences exhibited by the proteomes provides a glimpse of innovative therapeutic paths to fight malaria. Blocking biosynthesis of UDP-GlcNAc or inhibiting the O-GlcNAc catalysis could be other promising options to inhibit the life cycle of Plasmodium. The existence of O-GlcNAcylation in P. falciparum and therefore in Apicomplexa in general could help to unravel the phylum���s difficult taxonomic classification., Hintergrund: Malaria tropica ist global gesehen eine der t��dlichsten Infektionskrankheiten. In einem historischen Kraftakt gelang es, die durch den Parasiten Plasmodium falciparum ausgel��ste und ��ber Mosquitos ��bertratgene Krankheit einzud��mmen und in vielen L��ndern vollst��ndig zu eradizieren. Dieses Ziel global zu erreichen, scheint jedoch noch in weiter Ferne. Vor allen in den tropischen Regionen Afrikas versterben j��hrlich weiterhin mehrere hunderttausend Menschen, vor allem S��uglinge und Kinder, an der Krankheit. Posttranslationale Modifikationen (PTMs) bilden eine gro��e Gruppe biochemischer Ver��nderungen, welche die Komplexit��t von Proteomen aller Lebewesen erh��hen. PTMs wurden aufgrund ihrer Beteiligung an verschiedensten Zellprozessen bereits mehrfach als Ziel potentieller Malaria-Therapeutika diskutiert. O-GlcNAcylierung ist eine bei vielen Organismen verbreitete PTM. Diese spezielle Form der Glykosylierung ist aufgrund der Beteiligung an verschiedenen Pathologien wie neurodegenerativen Erkrankungen und Neoplasien in den Fokus ger��ckt. Sie spielt jedoch auch eine wichtige regulative Rolle im zellul��ren Energiestoffwechsel. Auch bei P. falciparum ist ihr allgemeines Vorkommen bereits bekannt. Ziel dieser Arbeit war es zu identifizieren, welche Proteine im Proteom des Parasiten O-GlcNAc modifiziert sind, mehr ��ber den Prozess dieser Modifikation herauszufinden und eventuelle Funktionen bei Apikomplexa generell nachvollziehen zu k��nnen. Methoden: Der P. falciparum Stamm 3D7 wurde in Erythrozytenkulturen angez��chtet und vermehrt. Das Proteom wurde auf O-GlcNAcylierung untersucht, hierbei wurden unterschiedliche Nachweismethoden angewandt. Das Niveau der UDP-GlcNAc-Konzentration, dem Donor der O-GlcNAc-Modifikation, wurde in der high performance Anion Exchange Chromatography] (HPAEC) gemessen. O-GlcNAcylierte Proteine wurden nach click-chemistry-Biotinmarkierung und mit Weizenkeimlektin-Agaroseperlen angereichert. Die Identifizierung der modifizierten Proteine erfolgte in der Massenspektometrie (nano-LC MS/MS). Ergebnisse: P. falciparum verf��gt ��ber einen eigenen, wenn auch im Vergleich zu MRC-5 Kontrollzellen sehr niedrigen, UDP-GlcNAc-Vorrat. In der Immundetektion stellen sich Unterschiede der O-GlcNAcylierung der verschiedenen Parasitenstadien dar. Durch verschiedene proteomischeTechniken konnten im Proteom von reifen Trophozoiten 14 O-GlcNAcylierte Proteine eindeutig identifiziert werden (11 ��ber click-chemistry, 6 ��ber sWGA-Perlen Anreicherung und eine durch spezifische Antik��rper). Diese Proteine sind an f��r das ��berleben des Parasiten wichtigen, Funktionen, Strukturen und Stoffwechselwegen beteiligt. Vier der identifizierten Proteine sind Enzyme der Glykolyse. Diese ist von gro��er Bedeutung f��r den Energiestoffwechsel des Parasiten. Durch Inkubation click-chemistry-modifizierter Proteine mit spezifischen Antik��rpern konnte die O-GlcNAcyirung der Proteine Hsp70 und ��-Tubulin zus��tzlich zur Massenspektroskopie immunbiochemisch gezeigt werden. Die Inkubation von P. falciparum-Kulturen mit einem Inhibitor der O-GlcNAc-Abspaltung f��hrte zu einer nicht signifikanten Abnahme der Wachstumsrate Schlussfolgerungen: In dieser Studie konnten zum ersten Mal O-GlcNAcylierte Proteine im Proteom von P. falciparum nachgewiesen und benannt werden. Auch wenn einige Parallelen zum O-GlcNAcom anderer Organismen bestehen, lassen strukturelle Unterschiede doch die M��glichkeit erscheinen, diese Strukturen als m��gliche Ziele einer Malariatherapie in Angriff zu nehmen. Die Blockierung der UDP-GlcNAc Biosynthese oder der Abspaltung von O-GlcNAc von bereits modifizierten Proteinen k��nnten andere vielversprechende Ans��tze darstellen, um den Lebenszyklus von P. falciparum zu hemmen. Zudem k��nnen das Auftreten der posttranslationalen Modifikation bei P. falciparum sowie die Unterschiede im Vergleich zu anderen Spezies Hinweise bez��glich der taxonomischen Einordnung der Apicomplexa bieten.
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- 2021
48. No more cold-chain failures, using dehydrated reagents in ELISA antibody-detection against animal trypanosomes of African origin
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Hervé Sèna Vitouley, Sophie Thevenon, Zakaria Bengaly, Marc Desquesnes, Leopold Millogo, and Géraldine Bossard
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Trypanosoma ,Trypanosoma congolense ,Context (language use) ,Enzyme-Linked Immunosorbent Assay ,Trypanosoma brucei ,L73 - Maladies des animaux ,African origin ,Serology ,Antigen ,Animals ,Déshydratation ,Trypanosoma vivax ,Mammals ,Parasitologie ,Trypanosoma evansi ,General Veterinary ,biology ,Technique immunologique ,Reproducibility of Results ,L70 - Sciences et hygiène vétérinaires - Considérations générales ,General Medicine ,Trypanosomose africaine ,biology.organism_classification ,Virology ,Trypanosomiasis, African ,Test ELISA ,Parasitology ,Indicators and Reagents ,Reproductibilité - Abstract
Animal trypanosomoses due to trypanosomes of African origin (ATAO), mainly caused by Trypanosoma congolense type Savannah (TCS), T. brucei brucei (TBB), T. vivax (TV), and T. evansi, are widespread diseases that affect domestic and wild mammals and have a huge economic impact. ATAO clinical suspicions are usually confirmed by parasitological and molecular methods, while sero-epidemiological surveys are generally carried out using the OIE-recommended ELISA method based on whole cell lysate soluble antigens (WCLSA) from purified trypanosomes; this reagent is usually stored frozen. With a view to expanding this ELISA test, we assessed, standardized, and validated the use of dehydrated rather than frozen WCLSA and serum samples. For the three ELISA assays (TV, TCS & TBB), a repeatability study revealed no significant difference between repeats. The results obtained using frozen rather than freeze-dried antigen and serum strongly correlated for Pearson’s correlation values (>0.93) and Lin’s measure (“very good” to “excellent”). Reproducibility was robust, with Pearson’s correlation values >0.97 for inter technician effects, and 0.87 (TV) to 0.97 (TBB & TCS) for inter-laboratory tests; their combination was “very satisfactory” to “excellent” according to Lin’s measure and there was no impact on qualitative test results. Dehydrated reagents offer the advantage of shipment at room temperature, allowing the secured provision of reagents to regional laboratories. Together with a compendium of standard diagnostic protocols for ATAO (/OIE), dehydrated reagents will enable the serological diagnosis of ATAO at regional level in endemic countries. This very welcome improvement in the context of the Progressive Control Pathway for trypanosomes, recently launched by African countries, will possibly be extended to Latin America in the near future.
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- 2021
49. Genomic surveillance of Yellow Fever Virus Epizootic in São Paulo, Brazil, 2016 - 2018
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Natália Coelho Couto de Azevedo Fernandes, Maria do Carmo Sampaio Tavares Timenetsky, Paola P. Silveira, Julien Thézé, Mariana Sequetin Cunha, Louis du Plessis, Leandro Abade, Renato De Souza, Laura Nogueira da Cruz, Jaqueline Goes de Jesus, Rodrigo Albergaria Réssio, F. L. L. Macedo, Oliver G. Pybus, Juliana Telles de Deus, Josué Díaz-Delgado, Luiz Carlos Junior Alcantara, Iray Maria Rocco, Renato S. Aguiar, Fernanda G. S. Vasami, Juliana Mariotti Guerra, Simon Dellicour, Regiane Maria Tironi de Menezes, Nuno R. Faria, Flavia Cristina da Silva Salles, Ester Cerdeira Sabino, Luis Filipe Mucci, Adriana Yurika Maeda, Cinthya dos Santos Cirqueira, Rosa Maria Tubaki, André Luiz de Abreu, Marta Giovanetti, Nicholas J. Loman, Regiane de Paula, Juliana Silva Nogueira, Joshua Quick, Patrícia Locosque Ramos, Roberta Spinola, Sarah C. Hill, Fabiana Cristina Pereira dos Santos, Ingra Morales Claro, Department of Zoology [Oxford], University of Oxford [Oxford], Unité Mixte de Recherche d'Épidémiologie des maladies Animales et zoonotiques (UMR EPIA), VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Laboratório de Radioecologia e Mudanças Globais (LARAMG), Universidade do Estado do Rio de Janeiro [Rio de Janeiro] (UERJ), Department of Infectious Diseases, Istituto Superiore di Sanita [Rome], Fundação Oswaldo Cruz (FIOCRUZ), Réseau International des Instituts Pasteur (RIIP), Génétique Physiologie et Systèmes d'Elevage (GenPhySE ), Ecole Nationale Vétérinaire de Toulouse (ENVT), Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-École nationale supérieure agronomique de Toulouse [ENSAT]-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Universidad Nacional de San Agustín (UNSA), University of Birmingham [Birmingham], and Biotempo
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Epidemiology ,[SDV]Life Sciences [q-bio] ,Virologie générale ,Geographical locations ,law.invention ,Disease Outbreaks ,Animal Diseases ,0302 clinical medicine ,Medical Conditions ,law ,Zoonoses ,Immunologie ,Medicine and Health Sciences ,Biology (General) ,Phylogeny ,ComputingMilieux_MISCELLANEOUS ,Data Management ,0303 health sciences ,Parasitologie ,Mammalian Genomics ,Geography ,Transmission (medicine) ,030302 biochemistry & molecular biology ,Yellow fever ,Phylogenetic Analysis ,Genomics ,3. Good health ,Phylogenetics ,Phylogeography ,Transmission (mechanics) ,Infectious Diseases ,Biogeography ,Sylvatic cycle ,Yellow fever virus ,Biologie ,Brazil ,geographic locations ,Research Article ,Primates ,Computer and Information Sciences ,Infectious Disease Control ,QH301-705.5 ,Genomic data ,030231 tropical medicine ,Immunology ,Zoology ,Genome, Viral ,Disease Surveillance ,Epizootics ,Microbiology ,Virus ,03 medical and health sciences ,Virology ,Yellow Fever ,parasitic diseases ,Genetics ,medicine ,Animals ,Humans ,Evolutionary Systematics ,Molecular Biology ,Epizootic ,Taxonomy ,030304 developmental biology ,Evolutionary Biology ,Population Biology ,Ecology and Environmental Sciences ,Primate Diseases ,Virologie médicale ,Biology and Life Sciences ,Outbreak ,Biologie moléculaire ,South America ,RC581-607 ,medicine.disease ,Animal Genomics ,Infectious Disease Surveillance ,Earth Sciences ,Biological dispersal ,Parasitology ,People and places ,Immunologic diseases. Allergy ,Microbiologie et protistologie [bacteriol.virolog.mycolog.] ,human activities ,Population Genetics - Abstract
São Paulo, a densely inhabited state in southeast Brazil that contains the fourth most populated city in the world, recently experienced its largest yellow fever virus (YFV) outbreak in decades. YFV does not normally circulate extensively in São Paulo, so most people were unvaccinated when the outbreak began. Surveillance in non-human primates (NHPs) is important for determining the magnitude and geographic extent of an epizootic, thereby helping to evaluate the risk of YFV spillover to humans. Data from infected NHPs can give more accurate insights into YFV spread than when using data from human cases alone. To contextualise human cases, identify epizootic foci and uncover the rate and direction of YFV spread in São Paulo, we generated and analysed virus genomic data and epizootic case data from NHPs in São Paulo. We report the occurrence of three spatiotemporally distinct phases of the outbreak in São Paulo prior to February 2018. We generated 51 new virus genomes from YFV positive cases identified in 23 different municipalities in São Paulo, mostly sampled from NHPs between October 2016 and January 2018. Although we observe substantial heterogeneity in lineage dispersal velocities between phylogenetic branches, continuous phylogeographic analyses of generated YFV genomes suggest that YFV lineages spread in São Paulo at a mean rate of approximately 1km per day during all phases of the outbreak. Viral lineages from the first epizootic phase in northern São Paulo subsequently dispersed towards the south of the state to cause the second and third epizootic phases there. This alters our understanding of how YFV was introduced into the densely populated south of São Paulo state. Our results shed light on the sylvatic transmission of YFV in highly fragmented forested regions in São Paulo state and highlight the importance of continued surveillance of zoonotic pathogens in sentinel species., SCOPUS: ar.j, info:eu-repo/semantics/published
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- 2020
50. Bedeutung der Dermatohistologie in der tropen- und reisedermatologischen Diagnostik.
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Elsner, P., Metz, S., and Schliemann, S.
- Abstract
Copyright of Der Hautarzt is the property of Springer Nature and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2014
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