47 results on '"Parkinson, C. L"'
Search Results
2. Variability of Antarctic Sea Ice and Changes in Carbon Dioxide
- Author
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Zwally, H. Jay, Parkinson, C. L., and Comiso, J. C.
- Published
- 1983
3. The Distribution of Kinetic Energy in the Southern Ocean: A Comparison between Observations and an Eddy Resolving General Circulation Model [and Discussion]
- Author
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Stevens, David P., Killworth, Peter D., Hindmarsh, C. A., Parkinson, C. L., and MacDonald, D. I. M.
- Published
- 1992
4. Antarctic Sea Ice Variability and Trends, 1979-2010
- Author
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Parkinson, C. L and Cavalieri, D. J
- Subjects
Meteorology And Climatology - Abstract
In sharp contrast to the decreasing sea ice coverage of the Arctic, in the Antarctic the sea ice cover has, on average, expanded since the late 1970s. More specifically, satellite passive-microwave data for the period November 1978 - December 2010 reveal an overall positive trend in ice extents of 17,100 +/- 2,300 square km/yr. Much of the increase, at 13,700 +/- 1,500 square km/yr, has occurred in the region of the Ross Sea, with lesser contributions from the Weddell Sea and Indian Ocean. One region, that of the Bellingshausen/Amundsen Seas, has, like the Arctic, instead experienced significant sea ice decreases, with an overall ice extent trend of -8,200 +/- 1,200 square km/yr. When examined through the annual cycle over the 32-year period 1979-2010, the Southern Hemisphere sea ice cover as a whole experienced positive ice extent trends in every month, ranging in magnitude from a low of 9,100 +/- 6,300 square km/yr in February to a high of 24,700 +/- 10,000 square km/yr in May. The Ross Sea and Indian Ocean also had positive trends in each month, while the Bellingshausen/Amundsen Seas had negative trends in each month, and the Weddell Sea and Western Pacific Ocean had a mixture of positive and negative trends. Comparing ice-area results to ice-extent results, in each case the ice-area trend has the same sign as the ice-extent trend, but differences in the magnitudes of the two trends identify regions with overall increasing ice concentrations and others with overall decreasing ice concentrations. The strong pattern of decreasing ice coverage in the Bellingshausen/Amundsen Seas region and increasing ice coverage in the Ross Sea region is suggestive of changes in atmospheric circulation. This is a key topic for future research.
- Published
- 2012
5. Comparison of the fecundity of three species of grain store mites on fungal diets
- Author
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Parkinson, C. L., Jamieson, N., Eborall, J., and Armitage, D. M.
- Published
- 1991
- Full Text
- View/download PDF
6. Longevity and fecundity ofAcarus siro on four field and eight storage fungi
- Author
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Parkinson, C. L., Barron, C. A., Barker, S. M., Thomas, A. C., and Armitage, D. M.
- Published
- 1991
- Full Text
- View/download PDF
7. Population increase and damage by three species of mites on wheat at 20°C and two humidities
- Author
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Parkinson, C. L.
- Published
- 1990
- Full Text
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8. 30-Year Satellite Record Reveals Accelerated Arctic Sea Ice Loss, Antarctic Sea Ice Trend Reversal
- Author
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Cavalieri, Donald J, Parkinson, C. L, and Vinnikov, K. Y
- Subjects
Oceanography - Abstract
Arctic sea ice extent decreased by 0.30 plus or minus 0.03 x 10(exp 6) square kilometers per decade from 1972 through 2002, but decreased by 0.36 plus or minus 0.05 x 10(exp 6) square kilometers per decade from 1979 through 2002, indicating an acceleration of 20% in the rate of decrease. In contrast to the Arctic, the Antarctic sea ice extent decreased dramatically over the period 1973-1977, then gradually increased, with an overall 30-year trend of -0.15 plus or minus 0.08 x 10(exp 6) square kilometers per 10yr. The trend reversal is attributed to a large positive anomaly in Antarctic sea ice extent observed in the early 1970's.
- Published
- 2003
9. 30-Year Satellite Record Reveals Contrasting Arctic and Antarctic Decadal Sea Ice Variability
- Author
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Cavalieri, D. J, Parkinson, C. L, and Vinnikov, K. Y
- Subjects
Geophysics - Abstract
A 30-year satellite record of sea ice extents derived mostly from satellite microwave radiometer observations reveals that the Arctic sea ice extent decreased by 0.30+0.03 x 10(exp 6) square kilometers per 10 yr from 1972 through 2002, but by 0.36 plus or minus 0.05 x 10(exp 6) square kilometers per 10yr from 1979 through 2002, indicating an acceleration of 20% in the rate of decrease. In contrast, the Antarctic sea ice extent decreased dramatically over the period 1973-1977, then gradually increased. Over the full 30-year period, the Antarctic ice extent decreased by 0.15 plus or minus 0.08 x 10(exp 6) square kilometers per 10 yr. The trend reversal is attributed to a large positive anomaly in Antarctic sea ice extent in the early 1970's, an anomaly that apparently began in the late 1960's, as observed in early visible and infrared satellite images.
- Published
- 2003
10. Spatial Distribution of Trends and Seasonality in the Hemispheric Sea Ice Covers
- Author
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Gloersen, P, Parkinson, C. L, Cavalieri, D. J, Cosmiso, J. C, and Zwally, H. J
- Subjects
Oceanography - Abstract
We extend earlier analyses of a 9-year sea ice data set that described the local seasonal and trend variations in each of the hemispheric sea ice covers to the recently merged 18.2-year sea ice record from four satellite instruments. The seasonal cycle characteristics remain essentially the same as for the shorter time series, but the local trends are markedly different, in some cases reversing sign. The sign reversal reflects the lack of a consistent long-term trend and could be the result of localized long-term oscillations in the hemispheric sea ice covers. By combining the separate hemispheric sea ice records into a global one, we have shown that there are statistically significant net decreases in the sea ice coverage on a global scale. The change in the global sea ice extent, is -0.01 +/- 0.003 x 10(exp 6) sq km per decade. The decrease in the areal coverage of the sea ice is only slightly smaller, so that the difference in the two, the open water within the packs, has no statistically significant change.
- Published
- 1998
11. Observed Hemispheric Asymmetry in Global Sea Ice Changes
- Author
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Cavalieri, D. J, Gloersen, P, Parkinson, C. L, Comiso, J. C, and Zwally, H. J
- Subjects
Oceanography - Abstract
From November 1978 through December 1996, the areal extent of sea ice decreased by 2.9 +/- 0.4 percent per decade in the Arctic and increased by 1.3 +/- 0.2 percent per decade in the Antarctic. The observed hemispheric asymmetry in these trends is consistent with a modeled response to a carbon dioxide-induced climate warming. The interannual variations, which are 2.3 percent of the annual mean in the Arctic, with a predominant period of about 5 years, and 3.4 percent of the annual mean in the Antarctic, with a predominant period of about 3 years, are uncorrelated.
- Published
- 1997
12. Permanent genetic resources added to molecular ecology resources database 1 January 2009-30 April 2009
- Author
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Abercrombie, L. G., Anderson, C. M., Baldwin, B. G., Bang, I. C., Beldade, R., Bernardi, G., Boubou, A., Branca, A., Bretagnolle, F., Bruford, M. W., Buonamici, A., Burnett, R. K., Canal, D., Cardenas, H., Caullet, C., Chen, S. Y., Chun, Y. J., Cossu, C., Crane, C. F., Cros-Arteil, S., Cudney-Bueno, R., Danti, R., Davila, J. A., Della Rocca, G., Dobata, S., Dunkle, L. D., Dupas, Stéphane, Faure, Nathalie, Ferrero, M. E., Fumanal, B., Gigot, G., Gonzalez, I., Goodwin, S. B., Groth, D., Hardesty, B. D., Hasegawa, E., Hoffman, E. A., Hou, M. L., Jamsari, A. F. J., Ji, H. J., Johnson, D. H., Joseph, L., Justy, F., Kang, E. J., Kaufmann, B., Kim, K. S., Kim, W. J., Koehler, A. V., Laitung, B., Latch, P., Liu, Y. D., Manjerovic, M. B., Martel, E., Metcalfe, S. S., Miller, J. N., Midgley, J. J., Migeon, A., Moore, A. J., Moore, W. L., Morris, V. R. F., Navajas, M., Navia, D., Neel, M. C., de Nova, P. J. G., Olivieri, I., Omura, T., Othman, A. S., Oudot-Canaff, J., Panthee, D. R., Parkinson, C. L., Patimah, I., Perez-Galindo, C. A., Pettengill, J. B., Pfautsch, S., Piola, F., Potti, J., Poulin, R., Raimondi, P. T., Rinehart, T. A., Ruzainah, A., Sarver, S. K., Scheffler, B. E., Schneider, A. R. R., Silvain, Jean-François, Azizah, M. N. S., Springer, Y. P., Stewart, C. N., Sun, W., Tiedemann, R., Tsuji, K., Trigiano, R. N., Vendramin, G. G., Wadl, P. A., Wang, L., Wang, X., Watanabe, K., Waterman, J. M., Weisser, W. W., Westcott, D. A., Wiesner, K. R., Xu, X. F., Yaegashi, S., and Yuan, J. S.
- Abstract
This article documents the addition of 283 microsatellite marker loci to the Molecular Ecology Resources Database. Loci were developed for the following species: Agalinis acuta; Ambrosia artemisiifolia; Berula erecta; Casuarius casuarius; Cercospora zeae-maydis; Chorthippus parallelus; Conyza canadensis; Cotesia sesamiae; Epinephelus acanthistius; Ficedula hypoleuca; Grindelia hirsutula; Guadua angustifolia; Leucadendron rubrum; Maritrema novaezealandensis; Meretrix meretrix; Nilaparvata lugens; Oxyeleotris marmoratus; Phoxinus neogaeus; Pristomyrmex punctatus; Pseudobagrus brevicorpus; Seiridium cardinale; Stenopsyche marmorata; Tetranychus evansi and Xerus inauris. These loci were cross-tested on the following species: Agalinis decemloba; Agalinis tenella; Agalinis obtusifolia; Agalinis setacea; Agalinis skinneriana; Cercospora zeina; Cercospora kikuchii; Cercospora sorghi; Mycosphaerella graminicola; Setosphaeria turcica; Magnaporthe oryzae; Cotesia flavipes; Cotesia marginiventris; Grindelia Xpaludosa; Grindelia chiloensis; Grindelia fastigiata; Grindelia lanceolata; Grindelia squarrosa; Leucadendron coniferum; Leucadendron salicifolium; Leucadendron tinctum; Leucadendron meridianum; Laodelphax striatellus; Sogatella furcifera; Phoxinus eos; Phoxinus rigidus; Phoxinus brevispinosus; Phoxinus bicolor; Tetranychus urticae; Tetranychus turkestani; Tetranychus ludeni; Tetranychus neocaledonicus; Tetranychus amicus; Amphitetranychus viennensis; Eotetranychus rubiphilus; Eotetranychus tiliarium; Oligonychus perseae; Panonychus citri; Bryobia rubrioculus; Schizonobia bundi; Petrobia harti; Xerus princeps; Spermophilus tridecemlineatus and Sciurus carolinensis.
- Published
- 2009
13. Possible Effects of Climate Warming on Selected Populations of Polar Bears (Ursus maritimus) in the Canadian Arctic
- Author
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Stirling, I. and Parkinson, C. L.
- Subjects
Global Commons ,climate change ,arctic regions ,polar bears ,Wildlife ,global warming - Abstract
"Polar bears depend on sea ice for survival. Climate warming in the Arctic has caused significant declines in total cover and thickness of sea ice in the polar basin and progressively earlier breakup in some areas. Inuit hunters in the areas of four polar bear populations in the eastern Canadian Arctic (including Western Hudson Bay) have reported seeing more bears near settlements during the open-water period in recent years. In a fifth ecologically similar population, no changes have yet been reported by Inuit hunters. These observations, interpreted as evidence of increasing population size, have resulted in increases in hunting quotas. However, long-term data on the population size and body condition of polar bears in Western Hudson Bay, as well as population and harvest data from Baffin Bay, make it clear that those two populations at least are more likely to be declining, not increasing. While the ecological details vary in the regions occupied by the five different populations discussed in this paper, analysis of passive-microwave satellite imagery beginning in the late 1970s indicates that the sea ice is breaking up at progressively earlier dates, so that bears must fast for longer periods during the open-water season. Thus, at least part of the explanation for the appearance of more bears near coastal communities and hunting camps is likely that they are searching for alternative food sources in years when their stored body fat depots may be depleted before freeze-up, when they can return to the sea ice to hunt seals again. We hypothesize that, if the climate continues to warm as projected by the Intergovernmental Panel on Climate Change (IPCC), then polar bears in all five populations discussed in this paper will be increasingly food-stressed, and their numbers are likely to decline eventually, probably significantly so. As these populations decline, problem interactions between bears and humans will likely continue, and possibly increase, as the bears seek alternative food sources. Taken together, the data reported in this paper suggest that a precautionary approach be taken to the harvesting of polar bears and that the potential effects of climate warming be incorporated into planning for the management and conservation of this species throughout the Arctic."
- Published
- 2006
14. Arctic sea ice variability and trends, 1979–2010
- Author
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Cavalieri, D. J., primary and Parkinson, C. L., additional
- Published
- 2012
- Full Text
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15. Antarctic sea ice variability and trends, 1979–2010
- Author
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Parkinson, C. L., primary and Cavalieri, D. J., additional
- Published
- 2012
- Full Text
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16. Sea ice/climate studies
- Author
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Parkinson, C. L
- Subjects
Meteorology And Climatology - Abstract
The objectives were to determine and analyze the annual cycle of sea ice extents in the Arctic Ocean and peripheral seas and bays over the period 1973 to 1986, looking in particular for any long term trends; to examine the relationship between local sea ice covers and the surrounding atmosphere and ocean; and to examine sea ice as a potential early indicator of climate change. The work involves creating regional and hemispheric time series of sea ice variables from satellite passive microwave data and analyzing these through various intercomparisons amongst themselves and with oceanographic and atmospheric fields.
- Published
- 1988
17. On the relationship between atmospheric circulation and the fluctuations in the sea ice extents of the Bering and Okhotsk Seas
- Author
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Cavalieri, D. J and Parkinson, C. L
- Subjects
Oceanography - Abstract
The influence of the hemispheric atmospheric circulation on the sea ice covers of the Bering Sea and the Sea of Okhotsk is examined using data obtained with the Nimbus 5 electrically scanning microwave radiometer for the four winters of the 1973-1976 period. The 3-day averaged sea ice extent data were used to establish periods for which there is an out-of-phase relationship between fluctuations of the two ice covers. A comparison of the sea-level atmospheric pressure field with the seasonal, interannual, and short-term sea ice fluctuations reveal an association between changes in the phase and the amplitude of the long waves in the atmosphere and advance and retreat of Arctic ice covers.
- Published
- 1987
18. Satellite-derived ice data sets no. 2: Arctic monthly average microwave brightness temperatures and sea ice concentrations, 1973-1976
- Author
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Parkinson, C. L, Comiso, J. C, and Zwally, H. J
- Subjects
Oceanography - Abstract
A summary data set for four years (mid 70's) of Arctic sea ice conditions is available on magnetic tape. The data include monthly and yearly averaged Nimbus 5 electrically scanning microwave radiometer (ESMR) brightness temperatures, an ice concentration parameter derived from the brightness temperatures, monthly climatological surface air temperatures, and monthly climatological sea level pressures. All data matrices are applied to 293 by 293 grids that cover a polar stereographic map enclosing the 50 deg N latitude circle. The grid size varies from about 32 X 32 km at the poles to about 28 X 28 km at 50 deg N. The ice concentration parameter is calculated assuming that the field of view contains only open water and first-year ice with an ice emissivity of 0.92. To account for the presence of multiyear ice, a nomogram is provided relating the ice concentration parameter, the total ice concentration, and the fraction of the ice cover which is multiyear ice.
- Published
- 1987
19. An introduction to three-dimensional climate modeling
- Author
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Washington, W. M and Parkinson, C. L
- Subjects
Meteorology And Climatology - Abstract
The development and use of three-dimensional computer models of the earth's climate are discussed. The processes and interactions of the atmosphere, oceans, and sea ice are examined. The basic theory of climate simulation which includes the fundamental equations, models, and numerical techniques for simulating the atmosphere, oceans, and sea ice is described. Simulated wind, temperature, precipitation, ocean current, and sea ice distribution data are presented and compared to observational data. The responses of the climate to various environmental changes, such as variations in solar output or increases in atmospheric carbon dioxide, are modeled. Future developments in climate modeling are considered. Information is also provided on the derivation of the energy equation, the finite difference barotropic forecast model, the spectral transform technique, and the finite difference shallow water waved equation model.
- Published
- 1986
20. Possible Sea Ice Impacts on Oceanic Deep Convection
- Author
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Parkinson, C. L
- Subjects
Oceanography - Abstract
Many regions of the world ocean known or suspected to have deep convection are sea-ice covered for at least a portion of the annual cycle. As this suggests that sea ice might have some impact on generating or maintaining this phenomenon, several mechanisms by which sea ice could exert an influence are presented in the following paragraphs. Sea ice formation could be a direct causal factor in deep convection by providing the surface density increase necessary to initiate the convective overturning. As sea ice forms, either by ice accretion or by in situ ice formation in open water or in lead areas between ice floes, salt is rejected to the underlying water. This increases the water salinity, thereby increasing water density in the mixed layer under the ice. A sufficient increase in density will lead to mixing with deeper waters, and perhaps to deep convection or even bottom water formation. Observations are needed to establish whether this process is actually occurring; it is most likely in regions with extensive ice formation and a relatively unstable oceanic density structure.
- Published
- 1984
21. On the seasonal sea ice cover of the Sea of Okhotsk
- Author
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Parkinson, C. L and Gratz, A. J
- Subjects
Oceanography - Abstract
Satellite microwave imagery has allowed determination of sea ice conditions in the Sea of Okhotsk over years 1973-1976. Comparisons of the general features of the cycle of sea ice distribution with basic oceanographic factors shows that ice forms first in cold, shallow, low-salinity waters and then seems to drift in a direction approximating the Okhotsk-Kuril current system. The heaviest ice cover occurred in 1973, followed by a much weaker ice cover in 1974. Only the 1972-73 growth season experienced close to monotonic advance. A much greater weakening of the ice cover through polynya formation occurred during the 1976 decay season than in any of the other three years. Two fairly common ice macrostructures in the Sea of Okhotsk were identified as a rectangular structure and a wedge structure; these are strongly correlated with the bathymetry of the region and with the known current system.
- Published
- 1983
22. Antartic sea ice, 1973 - 1976: Satellite passive-microwave observations
- Author
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Zwally, H. J, Comiso, J. C, Parkinson, C. L, Campbell, W. J, Carsey, F. D, and Gloersen, P
- Subjects
Oceanography - Abstract
Data from the Electrically Scanning Microwave Radiometer (ESMR) on the Nimbus 5 satellite are used to determine the extent and distribution of Antarctic sea ice. The characteristics of the southern ocean, the mathematical formulas used to obtain quantitative sea ice concentrations, the general characteristics of the seasonal sea ice growth/decay cycle and regional differences, and the observed seasonal growth/decay cycle for individual years and interannual variations of the ice cover are discussed. The sea ice data from the ESMR are presented in the form of color-coded maps of the Antarctic and the southern oceans. The maps show brightness temperatures and concentrations of pack ice averaged for each month, 4-year monthly averages, and month-to-month changes. Graphs summarizing the results, such as areas of sea ice as a function of time in the various sectors of the southern ocean are included. The images demonstrate that satellite microwave data provide unique information on large-scale sea ice conditions for determining climatic conditions in polar regions and possible global climatic changes.
- Published
- 1983
23. Sensitivity of a climatologically-driven sea ice model to the ocean heat flux
- Author
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Parkinson, C. L and Good, M. R
- Subjects
Oceanography - Abstract
Ocean heat flux sensitivity was studied on a numerical model of sea ice covering the Weddell Sea region of the southern ocean. The model is driven by mean monthly climatological atmospheric variables. For each model run, the ocean heat flux is uniform in both space and time. Ocean heat fluxes below 20 W m to the minus 2 power do not provide sufficient energy to allow the ice to melt to its summertime thicknesses and concentrations by the end of the 14 month simulation, whereas ocean heat fluxes of 30 W m to the minus 2 power and above result in too much ice melt, producing the almost total disappearance of ice in the Weddell Sea by the end of the 14 months. These results are dependent on the atmospheric forcing fields.
- Published
- 1982
24. Compensation for use of monthly-averaged winds in numerical modeling
- Author
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Parkinson, C. L
- Subjects
Meteorology And Climatology - Abstract
Ratios R of the monthly averaged wind speeds to the magnitudes of the monthly averaged wind vectors are presented over a 41 x 41 grid covering the southern Ocean and the Antarctic continent. The ratio is found to vary from 1 to over 1000, with an average value of 1.86. These ratios R are relevant for converting from sensible and latent heats calculated with mean monthly data to those calculated with 12 hourly data. The corresponding ratios alpha for wind stress, along with the angle deviations involved, are also presented over the same 41 x 41 grid. The values of alpha generally exceed those for R and average 2.66. Regions in zones of variable wind directions have larger R and alpha ratios, over the ice-covered portions of the southern Ocean averaging 2.74 and 4.35 for R and alpha respectively. Thus adjustments to compensate for the use of mean monthly wind velocities should be stronger for wind stress than for turbulent heats and stronger over ice covered regions than over regions with more persistent wind directions, e.g., those in the belt of mid-latitude westerlies.
- Published
- 1981
25. Large-scale variations in observed Antarctic Sea ice extent and associated atmospheric circulation
- Author
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Cavalieri, D. J and Parkinson, C. L
- Subjects
Meteorology And Climatology - Abstract
The 1974 Antarctic large scale sea ice extent is studied from data from Nimbus 2 and 5 and temperature and sea level pressure fields from the Australian Meteorological Data Set. Electrically Scanning Microwave Radiometer data were three-day averaged and compared with 1000 mbar atmospheric pressure and sea level pressure data, also in three-day averages. Each three-day period was subjected to a Fourier analysis and included the mean latitude of the ice extent and the phases and percent variances in terms of the first six Fourier harmonics. Centers of low pressure were found to be generally east of regions which displayed rapid ice growth, and winds acted to extend the ice equatorward. An atmospheric response was also noted as caused by the changing ice cover.
- Published
- 1981
- Full Text
- View/download PDF
26. Oceanographic influences on the sea ice cover in the Sea of Okhotsk
- Author
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Gratz, A. J and Parkinson, C. L
- Subjects
Oceanography - Abstract
Sea ice conditions in the Sea of Okhotsk, as determined by satellite images from the electrically scanning microwave radiometer on board Nimbus 5, were analyzed in conjunction with the known oceanography. In particular, the sea ice coverage was compared with the bottom bathymetry and the surface currents, water temperatures, and salinity. It is found that ice forms first in cold, shallow, low salinity waters. Once formed, the ice seems to drift in a direction approximating the Okhotsk-Kuril current system. Two basic patterns of ice edge positioning which persist for significant periods were identified as a rectangular structure and a wedge structure. Each of these is strongly correlated with the bathymetry of the region and with the known current system, suggesting that convective depth and ocean currents play an important role in determining ice patterns.
- Published
- 1981
27. Wintertime microwave observations of the North Water polynya
- Author
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Crawford, J. P and Parkinson, C. L
- Subjects
Oceanography - Abstract
Electronically Scanning Microwave Radiometer data from Nimbus 5 have been used to examine variations in the area of the North Water polynya, i.e., an area of reduced ice concentration in a region of predominantly ice-covered water, during the winter periods 1973-74, 1974-75, and 1975-76. It is found that the North Water polynya opens and closes repeatedly during the winter season, being open roughly 30% of the time between October and May. No strong correlations are found between this opening and limited atmospheric data available from three surrounding stations.
- Published
- 1981
28. Sea ice simulations based on fields generated by the GLAS GCM
- Author
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Parkinson, C. L and Herman, G. F
- Subjects
Oceanography - Abstract
The GLAS General Circulation Model (GCM) was applied to the four-month simulation of the thermodynamic part of the Parkinson-Washington sea ice model using atmospheric boundary conditions. The sea ice thickness and distribution were predicted for the Jan. 1-Apr. 30 period using the GCM-fields of solar and infrared radiation, specific humidity and air temperature at the surface, and snow accumulation; the sensible heat and evaporative surface fluxes were consistent with the ground temperatures produced by the ice model and the air temperatures determined by the atmospheric concept. It was concluded that the Parkinson-Washington sea ice model results in acceptable ice concentrations and thicknesses when used with GLAS GCM for the Jan.-Apr. period suggesting the feasibility of fully coupled ice-atmosphere simulations with these two approaches.
- Published
- 1980
29. A large-scale numerical model of sea ice
- Author
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Parkinson, C. L and Washington, W. M
- Subjects
Oceanography - Abstract
The described large-scale sea ice model, which is capable of coupling with atmospheric and oceanic models of comparable resolution, simulates the yearly cycle of ice in both the Northern and Southern Hemispheres. Model results for the yearly cycle of sea ice thickness and extent in both the Arctic and the Antarctic are presented. Horizontally the model resolution is approximately 200 km, while vertically four layers - ice, snow, ocean, and atmosphere - are considered. Thermodynamic processes based on energy balances at the various interfaces and dynamic processes based on wind stress, water stress, Coriolis force, internal ice resistance, and the stress from the tilt of the sea surface are incorporated. It is assumed that the ice within a given grid square is of uniform thickness, although each square has a variable percentage of its area ice free.
- Published
- 1979
30. Antarctic sea ice variability and trends, 1979–2006
- Author
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Cavalieri, D. J., primary and Parkinson, C. L., additional
- Published
- 2008
- Full Text
- View/download PDF
31. Phylogeny and historical biogeography of African ground squirrels: the role of climate change in the evolution of Xerus
- Author
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HERRON, M. D., primary, WATERMAN, J. M., additional, and PARKINSON, C. L., additional
- Published
- 2005
- Full Text
- View/download PDF
32. 30-Year satellite record reveals contrasting Arctic and Antarctic decadal sea ice variability
- Author
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Cavalieri, D. J., primary, Parkinson, C. L., additional, and Vinnikov, K. Y., additional
- Published
- 2003
- Full Text
- View/download PDF
33. Spatial distribution of trends and seasonally in the hemispheric sea ice covers: 1978-1996
- Author
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Gloersen, P., primary, Parkinson, C. L., additional, Cavalieri, D. J., additional, Comiso, J. C., additional, and Zwally, H. J., additional
- Published
- 1999
- Full Text
- View/download PDF
34. Deriving long-term time series of sea ice cover from satellite passive-microwave multisensor data sets
- Author
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Cavalieri, D. J., primary, Parkinson, C. L., additional, Gloersen, P., additional, Comiso, J. C., additional, and Zwally, H. J., additional
- Published
- 1999
- Full Text
- View/download PDF
35. Dynamic Nucleotide Mutation Gradients and Control Region Usage in Squamate Reptile Mitochondrial Genomes.
- Author
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Castoe, T. A., Gu, W., de Koning, A. P. J., Daza, J. M., Jiang, Z. J., Parkinson, C. L., and Pollock, D. D.
- Subjects
SNAKES ,ANIMAL mutation ,SQUAMATA ,MITOCHONDRIAL DNA ,CHROMOSOME replication ,GENOMICS - Abstract
Gradients of nucleotide bias and substitution rates occur in vertebrate mitochondrial genomes due to the asymmetric nature of the replication process. The evolution of these gradients has previously been studied in detail in primates, but not in other vertebrate groups. From the primate study, the strengths of these gradients are known to evolve in ways that can substantially alter the substitution process, but it is unclear how rapidly they evolve over evolutionary time or how different they may be in different lineages or groups of vertebrates. Given the importance of mitochondrial genomes in phylogenetics and molecular evolutionary research, a better understanding of how asymmetric mitochondrial substitution gradients evolve would contribute key insights into how this gradient evolution may mislead evolutionary inferences, and how it may also be incorporated into new evolutionary models. Most snake mitochondrial genomes have an additional interesting feature, 2 nearly identical control regions, which vary among different species in the extent that they are used as origins of replication. Given the expanded sampling of complete snake genomes currently available, together with 2 additional snakes sequenced in this study, we reexamined gradient strength and CR usage in alethinophidian snakes as well as several lizards that possess dual CRs. Our results suggest that nucleotide substitution gradients (and corresponding nucleotide bias) and CR usage is highly labile over the ∼200 m.y. of squamate evolution, and demonstrates greater overall variability than previously shown in primates. The evidence for the existence of such gradients, and their ability to evolve rapidly and converge among unrelated species suggests that gradient dynamics could easily mislead phylogenetic and molecular evolutionary inferences, and argues strongly that these dynamics should be incorporated into phylogenetic models. Copyright © 2010 S. Karger AG, Basel [ABSTRACT FROM AUTHOR]
- Published
- 2010
- Full Text
- View/download PDF
36. Natural history notes
- Author
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Wampler, J., Nilsson, J., Camper, J. D., Herman, J. E., Brosse, W., Stone, Z. S., Wolok, M., Whelan, C. U., Whelan, K. R. T., Clem, S., Rumbach, M., Zhou, J., Hernandez, A., Yuan, Z., Wang, K., Thompson, M. E., Donnelly, M. A., Mendoza, M. S., Blais, B., Ryan, M. J., Latella, I. M., Gustafson, G., Giermakowski, J. T., Snell, H., Mcallister, C. T., Durden, L. A., Kiryu, Y., Landsberg, J. H., Stabile, J., Cárdenas-Ortega, M. S., Herrera-Lopera, J. M., Tice, A. K., Matthew Brown, Altig, R., Carlson, B. E., Nikolakis, Z. L., Westfall, A. K., Goetz, S. M., Laurencio, D., Miller, M. A., Shahrudin, S., Wizen, G., Rueda, J. A. G., Mendoza, J. S., Tortorelli, C. M., Gannon, D. G., Stynoski, J. L., Trama, F. A., Lodge, T. M., Elliott, T. F., Henkel, T. W., Dutra-Araújo, D., Moser, C. F., Ansolch, M., Müller, J., Schünemann, H. E., Hartzell, S. M., Soe, M. M., Nwe, S. S., Platt, S. G., Rainwater, T. R., Hughes, G. N., Monck-Whipp, L., Litzgus, J. D., Henderson, R. A., Puffer, S. R., Lovich, J. E., Rautsaw, R. M., Yanick, C., Medina, S., Parkinson, C. L., Martin, S., Bolt, M. R., Campinhos, E. C., Mônico, A. T., Lauvers, W. D., Clemente-Carvalho, R. B. G., Coombs, G., Franklin, C. J., Oyervides, M. G., Keenan, S. W., Tellez, M., Hartzell, M. B., Tetzlaff, S. J., Schiltz, N. G., Diggins, C. A., Higdon, S. D., Ford, W. M., Mccoy, L., Ponder, J. R., Lasalle, M., Smith, R., Birkhead, R. D., Munscher, E., Butterfield, B. P., Cline, E. A., Dreschel, T. W., Schonhoff, B. R., Mccann, F., Escobedo-Galván, A. H., Cupul-Magaña, F. G., Goldberg, S. R., Bursey, C. R., Grismer, L. L., Nino, K. S., Dos Santos, I. Y. G. S., Dos Santos, E. M., Ljustina, O., Stroud, J. T., White, B. C., Cove, M. V., Marrero, R., Rodríguez-Cabrera, T. M., Torres, J., Paulissen, M. A., Walker, J. M., Carpenter, G. C., Fitzgerald, A. L., Kamees, L. K., Friers, J., Fitzsimons, J., Thomas, J., Dissanayake, D. S. B., Jayasinghe, H. D., Wellappuliarachchi, S., Kartje, M. E., Corneil, J. P., Montgomery, C. E., Reynoso, V. H., Ariano-Sánchez, D., Gil-Escobedo, J., Vicente, N. S., Halloy, M., Paluh, D. J., Bauer, A. M., Adams, A. A. Y., Adams, R. D., Skagen, S. K., Martin, D. J., Lambert, M. R., Goldfarb, B. A., Watkins-Colwell, G. J., Donihue, C. M., Luna-González, J. M., Solís-Rojas, C., Lazcano, D., Ellis, R., Hawkeswood, T. J., Metcalfe, D. C., Vogrinc, P. N., Mccleary, R. J. R., Benel, T. Y., Meneses-Pelayo, E., Aximoff, I., Queiroz, F., Freitas, L., Rhoads, D. D., Moldowan, P. D., Muscat, E., Entiauspe-Neto, O. M., Baptista, G. M., Gonzalez, R. C., Castro, T. M., Silva-Sorares, T., Bello-Sánchez, E. A., Vaca-León, O. I. M., Morales-Mávil, J. E., Brattstrom, B. H., Dieterich, J. K., Dieterich, R., Shipman, M. E., Benício, R. A., Christman, B. L., Barkalow, A., Jennings, R. D., Hamilton, G. L., Bain, J., Palis, J. G., Crnobrna, B., Armes, M., Williams, H. F., Prado, P. C., Koski, D. A., Koski, A. P. V., Doody, J. S., Elmore, K., Meier, A., Kain, P., Tank, C., Sharma, V., Enge, K. M., Mays, J. D., Perkins, M. W., Eason, P. K., Lee, J. L., Duarte, M. R., Fantuzzi, J. A., Jamieson, K., Pollack, K., Zarate, B., Mori, A., Jono, T., Takeuchi, H., Das, I., Donini, J. T., Ussa, M., Desantis, D. L., Mata-Silva, V., Johnson, J. D., Durso, A. M., Rosenthal, B., Lethaby, M., Gray, B. S., Suárez-Varón, G., Suárez-Rodríguez, O., Chávez-Siles, D., Pérez-Arriaga, F., Andrade-Soto, G., Aguilar-Isaac, L., Cancino-Quezadas, N., Hernández-Gallegos, O., Emmons, I. D., Nowak, E. M., Theimer, T. C., Dixon-Maccallum, G. P., Bell, K. A. H., O Connor, B. J., Forrester, A. J., and Geluso, K.
37. A survey of the genetic diversity of the loggerhead and green sea turtles of the Sultanate of Oman
- Author
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Reece, Joshua S., Alansari, A., Kalkvik, H. M., Alkindi, A., Mahmoud, I., Al Kiyumi, A. Y., Elshafie, A. E., Michael Jensen, and Parkinson, C. L.
38. Comparison of the fecundity of three species of grain store mites onfungal diets
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Parkinson, C. L., Jamieson, N., Armitage, D. M., and Eborall, J.
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FERTILITY ,PEST science - Published
- 1991
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39. Longevity and fecundity of Acarus siro on four field and eight storage fungi
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Thomas, A. C., Armitage, D. M., Barker, S. M., Barron, C. A., and Parkinson, C. L.
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LONGEVITY ,FUNGI ,FERTILITY - Published
- 1991
40. Arctic sea ice extent and drift, modeled as a viscous fluid
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Parkinson, C. L. and Ling, C.-H.
- Published
- 1986
41. Permanent Genetic Resources added to Molecular Ecology Resources database 1 January 2009-30 April 2009.
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Abercrombie LG, Anderson CM, Baldwin BG, Bang IC, Beldade R, Bernardi G, Boubou A, Branca A, Bretagnolle F, Bruford MW, Buonamici A, Burnett RK Jr, Canal D, Cárdenas H, Caullet C, Chen SY, Chun YJ, Cossu C, Crane CF, Cros-Arteil S, Cudney-Bueno R, Danti R, Dávila JA, Della Rocca G, Dobata S, Dunkle LD, Dupas S, Faure N, Ferrero ME, Fumanal B, Gigot G, González I, Goodwin SB, Groth D, Hardesty BD, Hasegawa E, Hoffman EA, Hou ML, Jamsari AF, Ji HJ, Johnson DH, Joseph L, Justy F, Kang EJ, Kaufmann B, Kim KS, Kim WJ, Koehler AV, Laitung B, Latch P, Liu YD, Manjerovic MB, Martel E, Metcalfe SS, Miller JN, Midgley JJ, Migeon A, Moore AJ, Moore WL, Morris VR, Navajas M, Navia D, Neel MC, De Nova PJ, Olivieri I, Omura T, Othman AS, Oudot-Canaff J, Panthee DR, Parkinson CL, Patimah I, Pérez-Galindo CA, Pettengill JB, Pfautsch S, Piola F, Potti J, Poulin R, Raimondi PT, Rinehart TA, Ruzainah A, Sarver SK, Scheffler BE, Schneider AR, Silvain JF, Siti Azizah MN, Springer YP, Stewart CN, Sun W, Tiedemann R, Tsuji K, Trigiano RN, Vendramin GG, Wadl PA, Wang L, Wang X, Watanabe K, Waterman JM, Weisser WW, Westcott DA, Wiesner KR, Xu XF, Yaegashi S, and Yuan JS
- Abstract
This article documents the addition of 283 microsatellite marker loci to the Molecular Ecology Resources Database. Loci were developed for the following species: Agalinis acuta; Ambrosia artemisiifolia; Berula erecta; Casuarius casuarius; Cercospora zeae-maydis; Chorthippus parallelus; Conyza canadensis; Cotesia sesamiae; Epinephelus acanthistius; Ficedula hypoleuca; Grindelia hirsutula; Guadua angustifolia; Leucadendron rubrum; Maritrema novaezealandensis; Meretrix meretrix; Nilaparvata lugens; Oxyeleotris marmoratus; Phoxinus neogaeus; Pristomyrmex punctatus; Pseudobagrus brevicorpus; Seiridium cardinale; Stenopsyche marmorata; Tetranychus evansi and Xerus inauris. These loci were cross-tested on the following species: Agalinis decemloba; Agalinis tenella; Agalinis obtusifolia; Agalinis setacea; Agalinis skinneriana; Cercospora zeina; Cercospora kikuchii; Cercospora sorghi; Mycosphaerella graminicola; Setosphaeria turcica; Magnaporthe oryzae; Cotesia flavipes; Cotesia marginiventris; Grindelia Xpaludosa; Grindelia chiloensis; Grindelia fastigiata; Grindelia lanceolata; Grindelia squarrosa; Leucadendron coniferum; Leucadendron salicifolium; Leucadendron tinctum; Leucadendron meridianum; Laodelphax striatellus; Sogatella furcifera; Phoxinus eos; Phoxinus rigidus; Phoxinus brevispinosus; Phoxinus bicolor; Tetranychus urticae; Tetranychus turkestani; Tetranychus ludeni; Tetranychus neocaledonicus; Tetranychus amicus; Amphitetranychus viennensis; Eotetranychus rubiphilus; Eotetranychus tiliarium; Oligonychus perseae; Panonychus citri; Bryobia rubrioculus; Schizonobia bundi; Petrobia harti; Xerus princeps; Spermophilus tridecemlineatus and Sciurus carolinensis., (© 2009 Blackwell Publishing Ltd.)
- Published
- 2009
- Full Text
- View/download PDF
42. Dynamic nucleotide mutation gradients and control region usage in squamate reptile mitochondrial genomes.
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Castoe TA, Gu W, de Koning AP, Daza JM, Jiang ZJ, Parkinson CL, and Pollock DD
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- Animals, Models, Genetic, Mutation genetics, DNA Replication genetics, Elapidae genetics, Evolution, Molecular, Genome, Mitochondrial genetics, Phylogeny
- Abstract
Gradients of nucleotide bias and substitution rates occur in vertebrate mitochondrial genomes due to the asymmetric nature of the replication process. The evolution of these gradients has previously been studied in detail in primates, but not in other vertebrate groups. From the primate study, the strengths of these gradients are known to evolve in ways that can substantially alter the substitution process, but it is unclear how rapidly they evolve over evolutionary time or how different they may be in different lineages or groups of vertebrates. Given the importance of mitochondrial genomes in phylogenetics and molecular evolutionary research, a better understanding of how asymmetric mitochondrial substitution gradients evolve would contribute key insights into how this gradient evolution may mislead evolutionary inferences, and how it may also be incorporated into new evolutionary models. Most snake mitochondrial genomes have an additional interesting feature, 2 nearly identical control regions, which vary among different species in the extent that they are used as origins of replication. Given the expanded sampling of complete snake genomes currently available, together with 2 additional snakes sequenced in this study, we reexamined gradient strength and CR usage in alethinophidian snakes as well as several lizards that possess dual CRs. Our results suggest that nucleotide substitution gradients (and corresponding nucleotide bias) and CR usage is highly labile over the approximately 200 m.y. of squamate evolution, and demonstrates greater overall variability than previously shown in primates. The evidence for the existence of such gradients, and their ability to evolve rapidly and converge among unrelated species suggests that gradient dynamics could easily mislead phylogenetic and molecular evolutionary inferences, and argues strongly that these dynamics should be incorporated into phylogenetic models., (Copyright 2010 S. Karger AG, Basel.)
- Published
- 2009
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43. Multigene phylogeny of land plants with special reference to bryophytes and the earliest land plants.
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Nickrent DL, Parkinson CL, Palmer JD, and Duff RJ
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- DNA, Mitochondrial, Evolution, Molecular, Genes, rRNA, Introns, Plant Proteins genetics, Plants genetics, Plants ultrastructure, Genes, Plant, Phylogeny, Plants classification, Ribulose-Bisphosphate Carboxylase
- Abstract
A widely held view of land plant relationships places liverworts as the first branch of the land plant tree, whereas some molecular analyses and a cladistic study of morphological characters indicate that hornworts are the earliest land plants. To help resolve this conflict, we used parsimony and likelihood methods to analyze a 6, 095-character data set composed of four genes (chloroplast rbcL and small-subunit rDNA from all three plant genomes) from all major land plant lineages. In all analyses, significant support was obtained for the monophyly of vascular plants, lycophytes, ferns (including PSILOTUM: and EQUISETUM:), seed plants, and angiosperms. Relationships among the three bryophyte lineages were unresolved in parsimony analyses in which all positions were included and weighted equally. However, in parsimony and likelihood analyses in which rbcL third-codon-position transitions were either excluded or downweighted (due to apparent saturation), hornworts were placed as sister to all other land plants, with mosses and liverworts jointly forming the second deepest lineage. Decay analyses and Kishino-Hasegawa tests of the third-position-excluded data set showed significant support for the hornwort-basal topology over several alternative topologies, including the commonly cited liverwort-basal topology. Among the four genes used, mitochondrial small-subunit rDNA showed the lowest homoplasy and alone recovered essentially the same topology as the multigene tree. This molecular phylogeny presents new opportunities to assess paleontological evidence and morphological innovations that occurred during the early evolution of terrestrial plants.
- Published
- 2000
- Full Text
- View/download PDF
44. Dynamic evolution of plant mitochondrial genomes: mobile genes and introns and highly variable mutation rates.
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Palmer JD, Adams KL, Cho Y, Parkinson CL, Qiu YL, and Song K
- Subjects
- Genes, Plant, Interspersed Repetitive Sequences, Introns, Mutation, Plants ultrastructure, Biological Evolution, DNA, Mitochondrial genetics, Genome, Plant, Plants genetics
- Abstract
We summarize our recent studies showing that angiosperm mitochondrial (mt) genomes have experienced remarkably high rates of gene loss and concomitant transfer to the nucleus and of intron acquisition by horizontal transfer. Moreover, we find substantial lineage-specific variation in rates of these structural mutations and also point mutations. These findings mostly arise from a Southern blot survey of gene and intron distribution in 281 diverse angiosperms. These blots reveal numerous losses of mt ribosomal protein genes but, with one exception, only rare loss of respiratory genes. Some lineages of angiosperms have kept all of their mt ribosomal protein genes whereas others have lost most of them. These many losses appear to reflect remarkably high (and variable) rates of functional transfer of mt ribosomal protein genes to the nucleus in angiosperms. The recent transfer of cox2 to the nucleus in legumes provides both an example of interorganellar gene transfer in action and a starting point for discussion of the roles of mechanistic and selective forces in determining the distribution of genetic labor between organellar and nuclear genomes. Plant mt genomes also acquire sequences by horizontal transfer. A striking example of this is a homing group I intron in the mt cox1 gene. This extraordinarily invasive mobile element has probably been acquired over 1,000 times separately during angiosperm evolution via a recent wave of cross-species horizontal transfers. Finally, whereas all previously examined angiosperm mtDNAs have low rates of synonymous substitutions, mtDNAs of two distantly related angiosperms have highly accelerated substitution rates.
- Published
- 2000
- Full Text
- View/download PDF
45. Seed plant phylogeny inferred from all three plant genomes: monophyly of extant gymnosperms and origin of Gnetales from conifers.
- Author
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Chaw SM, Parkinson CL, Cheng Y, Vincent TM, and Palmer JD
- Subjects
- DNA, Ribosomal genetics, Molecular Sequence Data, Cycadopsida genetics, Genome, Plant, Phylogeny, Trees genetics
- Abstract
Phylogenetic relationships among the five groups of extant seed plants are presently quite unclear. For example, morphological studies consistently identify the Gnetales as the extant sister group to angiosperms (the so-called "anthophyte" hypothesis), whereas a number of molecular studies recover gymnosperm monophyly, and few agree with the morphology-based placement of Gnetales. To better resolve these and other unsettled issues, we have generated a new molecular data set of mitochondrial small subunit rRNA sequences, and have analyzed these data together with comparable data sets for the nuclear small subunit rRNA gene and the chloroplast rbcL gene. All nuclear analyses strongly ally Gnetales with a monophyletic conifers, whereas all mitochondrial analyses and those chloroplast analyses that take into account saturation of third-codon position transitions actually place Gnetales within conifers, as the sister group to the Pinaceae. Combined analyses of all three genes strongly support this latter relationship, which to our knowledge has never been suggested before. The combined analyses also strongly support monophyly of extant gymnosperms, with cycads identified as the basal-most group of gymnosperms, Ginkgo as the next basal, and all conifers except for Pinaceae as sister to the Gnetales + Pinaceae clade. According to these findings, the Gnetales may be viewed as extremely divergent conifers, and the many morphological similarities between angiosperms and Gnetales (e.g., double fertilization and flower-like reproductive structures) arose independently.
- Published
- 2000
- Full Text
- View/download PDF
46. Phylogeography of the pitviper clade Agkistrodon: historical ecology, species status, and conservation of cantils.
- Author
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Parkinson CL, Zamudio KR, and Greene HW
- Subjects
- Agkistrodon genetics, Animals, Central America, DNA, Mitochondrial, DNA, Ribosomal, Ecology, Likelihood Functions, Mexico, Molecular Sequence Data, RNA, Transfer, His, RNA, Transfer, Ser, Agkistrodon physiology, Genetics, Population, Phylogeny
- Abstract
We used mitochondrial DNA sequences from three gene regions and two tRNAs (ND4, tRNA-HIS-SER, 12S, and 16S rDNA) to investigate the historical ecology of the New World pitviper clade Agkistrodon, with emphasis on the disjunct subspecies of the cantil, A. bilineatus. We found strong evidence that the copperhead (A. contortrix) is basal to its congeners, and that the cottonmouth (A. piscivorus) is basal to cantils. Phylogeography and natural history of the living terminal taxa imply that Agkistrodon primitively occupied relatively temperate habitats, with subsequent evolution of tropicality in ancestral A. bilineatus. Our best supported phylogeny rejects three gulf arc scenarios for the biogeography of A. bilineatus. We find significant statistical support for an initial divergence between populations on the east and west coasts of México and subsequent occupancy of the Yucatán Peninsula, by way of subhumid corridors in northern Central America. Based on phylogenetic relationships, morphological and molecular divergence, and allopatry we elevate A. b. taylori of northeastern México to species status. Taylor's cantil is likely threatened by habitat destruction and small geographical range, and we offer recommendations for its conservation and management.
- Published
- 2000
- Full Text
- View/download PDF
47. Multigene analyses identify the three earliest lineages of extant flowering plants.
- Author
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Parkinson CL, Adams KL, and Palmer JD
- Subjects
- Magnoliopsida classification, Phylogeny, Time Factors, Biological Evolution, Genes, Plant, Magnoliopsida genetics
- Abstract
Flowering plants (angiosperms) are by far the largest, most diverse, and most important group of land plants, with over 250,000 species and a dominating presence in most terrestrial ecosystems. Understanding the origin and early diversification of angiosperms has posed a long-standing botanical challenge [1]. Numerous morphological and molecular systematic studies have attempted to reconstruct the early history of this group, including identifying the root of the angiosperm tree. There is considerable disagreement among these studies, with various groups of putatively basal angiosperms from the subclass Magnoliidae having been placed at the root of the angiosperm tree (reviewed in [2-4]). We investigated the early evolution of angiosperms by conducting combined phylogenetic analyses of five genes that represent all three plant genomes from a broad sampling of angiosperms. Amborella, a monotypic, vessel-less dioecious shrub from New Caledonia, was clearly identified as the first branch of angiosperm evolution, followed by the Nymphaeales (water lillies), and then a clade of woody vines comprising Schisandraceae and Austrobaileyaceae. These findings are remarkably congruent with those from several concurrent molecular studies [5-7] and have important implications for whether or not the first angiosperms were woody and contained vessels, for interpreting the evolution of other key characteristics of basal angiosperms, and for understanding the timing and pattern of angiosperm origin and diversification.
- Published
- 1999
- Full Text
- View/download PDF
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