89 results on '"Parrotta L."'
Search Results
2. More tolerant than expected: Taking into account the ability of Cladonia portentosa to cope with increased nitrogen availability in environmental policy
- Author
-
Munzi, S., Cruz, C., Branquinho, C., Cai, G., Faleri, C., Parrotta, L., Bini, L., Gagliardi, A., Leith, I.D., and Sheppard, L.J.
- Published
- 2020
- Full Text
- View/download PDF
3. Chronic heat stress affects the photosynthetic apparatus of Solanum lycopersicum L. cv Micro-Tom
- Author
-
Parrotta, L., Aloisi, I., Faleri, C., Romi, M., Del Duca, S., and Cai, G.
- Published
- 2020
- Full Text
- View/download PDF
4. Unravelling the potential of cricket-based hydrolysed sourdough on the quality of an innovative bakery product
- Author
-
Rossi, S., primary, Parrotta, L., additional, Gottardi, D., additional, Glicerina, V.T., additional, Duca, S. Del, additional, Rosa, M. Dalla, additional, Patrignani, F., additional, Schlüter, O., additional, and Lanciotti, R., additional
- Published
- 2022
- Full Text
- View/download PDF
5. More nature in the city
- Author
-
Capotorti, G, Bonacquisti, S, Abis, L, Aloisi, I, Attorre, F, Bacaro, G, Balletto, G, Banfi, E, Barni, E, Bartoli, F, Bazzato, E, Beccaccioli, M, Braglia, R, Bretzel, F, Brighetti, M, Brundu, G, Burnelli, M, Calfapietra, C, Cambria, V, Caneva, G, Canini, A, Caronni, S, Castello, M, Catalano, C, Celesti-Grapow, L, Cicinelli, E, Cipriani, L, Citterio, S, Concu, G, Coppi, A, Corona, E, Del Duca, S, Del, V, Di Gristina, E, Domina, G, Faino, L, Fano, E, Fares, S, Farris, E, Farris, S, Fornaciari, M, Gaglio, M, Galasso, G, Galletti, M, Gargano, M, Gentili, R, Giannotta, A, Guarino, C, Guarino, R, Iaquinta, G, Iiriti, G, Lallai, A, Lallai, E, Lattanzi, E, Manca, S, Manes, F, Marignani, M, Marinangeli, F, Mariotti, M, Mascia, F, Mazzola, P, Meloni, G, Michelozzi, P, Miraglia, A, Montagnani, C, Mundula, L, Muresan, A, Musanti, F, Nardini, A, Nicosia, E, Oddi, L, Orlandi, F, Pace, R, Palumbo, M, Palumbo, S, Parrotta, L, Pasta, S, Perini, K, Poldini, L, Postiglione, A, Prigioniero, A, Proietti, C, Raimondo, F, Ranfa, A, Redi, E, Reverberi, M, Roccotiello, E, Ruga, L, Savo, V, Scarano, P, Schirru, F, Sciarrillo, R, Scuderi, F, Sebastiani, A, Siniscalco, C, Sordo, A, Suanno, C, Tartaglia, M, Tilia, A, Toffolo, C, Toselli, E, Travaglini, A, Ventura, F, Venturella, G, Vincenzi, F, Blasi, C, Capotorti G., Bonacquisti S., Abis L., Aloisi I., Attorre F., Bacaro G., Balletto G., Banfi E., Barni E., Bartoli F., Bazzato E., Beccaccioli M., Braglia R., Bretzel F., Brighetti M. A., Brundu G., Burnelli M., Calfapietra C., Cambria V. E., Caneva G., Canini A., Caronni S., Castello M., Catalano C., Celesti-Grapow L., Cicinelli E., Cipriani L., Citterio S., Concu G., Coppi A., Corona E., Del Duca S., Del V. E., Di Gristina E., Domina G., Faino L., Fano E. A., Fares S., Farris E., Farris S., Fornaciari M., Gaglio M., Galasso G., Galletti M., Gargano M. L., Gentili R., Giannotta A. P., Guarino C., Guarino R., Iaquinta G., Iiriti G., Lallai A., Lallai E., Lattanzi E., Manca S., Manes F., Marignani M., Marinangeli F., Mariotti M., Mascia F., Mazzola P., Meloni G., Michelozzi P., Miraglia A., Montagnani C., Mundula L., Muresan A. N., Musanti F., Nardini A., Nicosia E., Oddi L., Orlandi F., Pace R., Palumbo M. E., Palumbo S., Parrotta L., Pasta S., Perini K., Poldini L., Postiglione A., Prigioniero A., Proietti C., Raimondo F. M., Ranfa A., Redi E. L., Reverberi M., Roccotiello E., Ruga L., Savo V., Scarano P., Schirru F., Sciarrillo R., Scuderi F., Sebastiani A., Siniscalco C., Sordo A., Suanno C., Tartaglia M., Tilia A., Toffolo C., Toselli E., Travaglini A., Ventura F., Venturella G., Vincenzi F., Blasi C., Capotorti, G, Bonacquisti, S, Abis, L, Aloisi, I, Attorre, F, Bacaro, G, Balletto, G, Banfi, E, Barni, E, Bartoli, F, Bazzato, E, Beccaccioli, M, Braglia, R, Bretzel, F, Brighetti, M, Brundu, G, Burnelli, M, Calfapietra, C, Cambria, V, Caneva, G, Canini, A, Caronni, S, Castello, M, Catalano, C, Celesti-Grapow, L, Cicinelli, E, Cipriani, L, Citterio, S, Concu, G, Coppi, A, Corona, E, Del Duca, S, Del, V, Di Gristina, E, Domina, G, Faino, L, Fano, E, Fares, S, Farris, E, Farris, S, Fornaciari, M, Gaglio, M, Galasso, G, Galletti, M, Gargano, M, Gentili, R, Giannotta, A, Guarino, C, Guarino, R, Iaquinta, G, Iiriti, G, Lallai, A, Lallai, E, Lattanzi, E, Manca, S, Manes, F, Marignani, M, Marinangeli, F, Mariotti, M, Mascia, F, Mazzola, P, Meloni, G, Michelozzi, P, Miraglia, A, Montagnani, C, Mundula, L, Muresan, A, Musanti, F, Nardini, A, Nicosia, E, Oddi, L, Orlandi, F, Pace, R, Palumbo, M, Palumbo, S, Parrotta, L, Pasta, S, Perini, K, Poldini, L, Postiglione, A, Prigioniero, A, Proietti, C, Raimondo, F, Ranfa, A, Redi, E, Reverberi, M, Roccotiello, E, Ruga, L, Savo, V, Scarano, P, Schirru, F, Sciarrillo, R, Scuderi, F, Sebastiani, A, Siniscalco, C, Sordo, A, Suanno, C, Tartaglia, M, Tilia, A, Toffolo, C, Toselli, E, Travaglini, A, Ventura, F, Venturella, G, Vincenzi, F, Blasi, C, Capotorti G., Bonacquisti S., Abis L., Aloisi I., Attorre F., Bacaro G., Balletto G., Banfi E., Barni E., Bartoli F., Bazzato E., Beccaccioli M., Braglia R., Bretzel F., Brighetti M. A., Brundu G., Burnelli M., Calfapietra C., Cambria V. E., Caneva G., Canini A., Caronni S., Castello M., Catalano C., Celesti-Grapow L., Cicinelli E., Cipriani L., Citterio S., Concu G., Coppi A., Corona E., Del Duca S., Del V. E., Di Gristina E., Domina G., Faino L., Fano E. A., Fares S., Farris E., Farris S., Fornaciari M., Gaglio M., Galasso G., Galletti M., Gargano M. L., Gentili R., Giannotta A. P., Guarino C., Guarino R., Iaquinta G., Iiriti G., Lallai A., Lallai E., Lattanzi E., Manca S., Manes F., Marignani M., Marinangeli F., Mariotti M., Mascia F., Mazzola P., Meloni G., Michelozzi P., Miraglia A., Montagnani C., Mundula L., Muresan A. N., Musanti F., Nardini A., Nicosia E., Oddi L., Orlandi F., Pace R., Palumbo M. E., Palumbo S., Parrotta L., Pasta S., Perini K., Poldini L., Postiglione A., Prigioniero A., Proietti C., Raimondo F. M., Ranfa A., Redi E. L., Reverberi M., Roccotiello E., Ruga L., Savo V., Scarano P., Schirru F., Sciarrillo R., Scuderi F., Sebastiani A., Siniscalco C., Sordo A., Suanno C., Tartaglia M., Tilia A., Toffolo C., Toselli E., Travaglini A., Ventura F., Venturella G., Vincenzi F., and Blasi C.
- Abstract
According to projects and practices that the Italian botanists and ecologists are carrying out for bringing “more nature in the city”, new insights for a factual integration between ecological perspectives and more consolidated aesthetic and agronomic approaches to the sustainable planning and management of urban green areas are provided.
- Published
- 2020
6. More nature in the city
- Author
-
Capotorti, G, primary, Bonacquisti, S, additional, Abis, L, additional, Aloisi, I, additional, Attorre, F, additional, Bacaro, G, additional, Balletto, G, additional, Banfi, E, additional, Barni, E, additional, Bartoli, F, additional, Bazzato, E, additional, Beccaccioli, M, additional, Braglia, R, additional, Bretzel, F, additional, Brighetti, M. A, additional, Brundu, G, additional, Burnelli, M, additional, Calfapietra, C, additional, Cambria, V. E, additional, Caneva, G, additional, Canini, A, additional, Caronni, S, additional, Castello, M, additional, Catalano, C, additional, Celesti-Grapow, L, additional, Cicinelli, E, additional, Cipriani, L, additional, Citterio, S, additional, Concu, G, additional, Coppi, A, additional, Corona, E, additional, Del Duca, S, additional, Del, Vico E, additional, Di Gristina, E, additional, Domina, G, additional, Faino, L, additional, Fano, E. A, additional, Fares, S, additional, Farris, E, additional, Farris, S, additional, Fornaciari, M, additional, Gaglio, M, additional, Galasso, G, additional, Galletti, M, additional, Gargano, M. L, additional, Gentili, R, additional, Giannotta, A. P, additional, Guarino, C, additional, Guarino, R, additional, Iaquinta, G, additional, Iiriti, G, additional, Lallai, A, additional, Lallai, E, additional, Lattanzi, E, additional, Manca, S, additional, Manes, F, additional, Marignani, M, additional, Marinangeli, F, additional, Mariotti, M, additional, Mascia, F, additional, Mazzola, P, additional, Meloni, G, additional, Michelozzi, P, additional, Miraglia, A, additional, Montagnani, C, additional, Mundula, L, additional, Muresan, A. N, additional, Musanti, F, additional, Nardini, A, additional, Nicosia, E, additional, Oddi, L, additional, Orlandi, F, additional, Pace, R, additional, Palumbo, M. E, additional, Palumbo, S, additional, Parrotta, L, additional, Pasta, S, additional, Perini, K, additional, Poldini, L, additional, Postiglione, A, additional, Prigioniero, A, additional, Proietti, C, additional, Raimondo, F. M, additional, Ranfa, A, additional, Redi, E. L, additional, Reverberi, M, additional, Roccotiello, E, additional, Ruga, L, additional, Savo, V, additional, Scarano, P, additional, Schirru, F, additional, Sciarrillo, R, additional, Scuderi, F, additional, Sebastiani, A, additional, Siniscalco, C, additional, Sordo, A, additional, Suanno, C, additional, Tartaglia, M, additional, Tilia, A, additional, Toffolo, C, additional, Toselli, E, additional, Travaglini, A, additional, Ventura, F, additional, Venturella, G, additional, Vincenzi, F, additional, and Blasi, C, additional
- Published
- 2020
- Full Text
- View/download PDF
7. Investigation on the impacts of raw and bioremediated olive oil mill waste on agroecosystems
- Author
-
Casini, S., Cai, G., Caliani, I., Romi, M., Parrotta, L., Giannetti, M., and Campani, T.
- Published
- 2020
8. Key genetic elements in HIV-1 gp120 V1,V2 and C4 domains tightly and differentially modulate gp120 interaction with the CCR5 and CXCR4 N terminus and HIV-1 antigenetic Potential
- Author
-
Svicher, V, Chen, M, Alteri, C, Costa, G, Dimonte, S, Chang, L, Parrotta, L, Dimaio, C, Surdo, M, Saccomandi, P, Alcaro, S, CECCHERINI SILBERSTEIN, F, Artese, A, Zhang, J, and Perno, Cf
- Subjects
Settore MED/07 - Microbiologia e Microbiologia Clinica - Published
- 2011
9. Effect of maraviroc on non-R5 tropic HIV-1: refined analysis of subjects from the phase IIb study A4001029
- Author
-
Surdo, M., primary, Alteri, C., additional, Puertas, M.C., additional, Saccomandi, P., additional, Parrotta, L., additional, Swenson, L., additional, Chapman, D., additional, Costa, G., additional, Artese, A., additional, Balestra, E., additional, Aquaro, S., additional, Alcaro, S., additional, Lewis, M., additional, Clotet, B., additional, Harrigan, R., additional, Valdez, H., additional, Svicher, V., additional, Perno, C.F., additional, Martinez-Picado, J., additional, and Ceccherini-Silberstein, F., additional
- Published
- 2015
- Full Text
- View/download PDF
10. New raltegravir resistance pathways induce broad cross-resistance to all currently used integrase inhibitors
- Author
-
Malet, I., primary, Gimferrer Arriaga, L., additional, Artese, A., additional, Costa, G., additional, Parrotta, L., additional, Alcaro, S., additional, Delelis, O., additional, Tmeizeh, A., additional, Katlama, C., additional, Valantin, M.-A., additional, Ceccherini-Silberstein, F., additional, Calvez, V., additional, and Marcelin, A.-G., additional
- Published
- 2014
- Full Text
- View/download PDF
11. Accumulation and post-translational modifications of plant tubulins
- Author
-
Parrotta, L., primary, Cresti, M., additional, and Cai, G., additional
- Published
- 2013
- Full Text
- View/download PDF
12. Accumulation and post-translational modifications of plant tubulins.
- Author
-
Parrotta, L., Cresti, M., Cai, G., and Weber, A.
- Subjects
- *
POST-translational modification , *TUBULINS , *CYTOSKELETON , *PLANT cells & tissues , *SPINDLE apparatus , *PROTOPLASMIC streaming , *PLANT cell walls - Abstract
The microtubular cytoskeleton of plant cells provides support for several functions (including the anchoring of proteins, assembly of the mitotic spindle, cytoplasmic streaming and construction of cell walls). Both α- and β-tubulins are encoded through multigene families that are differentially expressed in different organs and tissues. To increase the variability of expression, both protein subunits are subjected to post-translational modifications, which could contribute to the assembly of specific microtubule structures. This review aims to highlight the role of specific post-translational modifications of tubulin in plant cells. We initially describe the expression and accumulation of α- and β-tubulin isoforms in different plants and at different stages of plant development. Second, we discuss the different types of post-translational modifications that, by adding or removing specific functional groups, increase the isoform heterogeneity and functional variability of tubulin. Modifications are proposed to form a 'code' that can be read by proteins interacting with microtubules. Therefore, the subpopulations of microtubules may bind to different associated proteins (motor and non-motor), thus creating the physical support for various microtubule functions. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
13. More nature in the city
- Author
-
Antonello Prigioniero, A. P Giannotta, Rocco Pace, S Manca, Andrea Nardini, Miris Castello, Luigi Mundula, Giovanni Bacaro, Mauro Mariotti, Ludovica Oddi, Michela Marignani, A Postiglione, E.A. Fano, Marco Fornaciari, Maria Tartaglia, L Cipriani, F Ventura, Carlo Blasi, Giuseppe Venturella, Luigi Parrotta, M Burnelli, L Ruga, E. Di Gristina, Francesco Maria Raimondo, Vito Emanuele Cambria, E Nicosia, G. Capotorti, Mattias Gaglio, S. Del Duca, Massimo Reverberi, L Abis, Francesco Scuderi, M. E Palumbo, A Sordo, Carlo Calfapietra, S Farris, Gabriele Galasso, E Toselli, Chiara Montagnani, Maria Letizia Gargano, Pierpaolo Scarano, Enrico Luigi Redi, G Iaquinta, Paola Michelozzi, Enrica Roccotiello, Ginevra Balletto, S Palumbo, Gianniantonio Domina, Roberto Braglia, C Proietti, Sandra Citterio, Chiara Toffolo, F Schirru, Gianluca Iiriti, Fabio Orlandi, Iris Aloisi, Alessandro Travaglini, Rosaria Sciarrillo, Katia Perini, M Galletti, M. A Brighetti, Sarah Caronni, Emmanuele Farris, A Miraglia, Fausto Manes, F Bretzel, Aldo Ranfa, Vico E Del, F Musanti, Elena Barni, Silvano Fares, E Corona, E. Lattanzi, E Lallai, Pietro Mazzola, Rodolfo Gentili, Livio Poldini, Carmine Guarino, Andrea Coppi, Flavia Bartoli, Salvatore Pasta, Marzia Beccaccioli, F Marinangeli, Valentina Savo, Erika Bazzato, Alessandro Sebastiani, A. Tilia, F Vincenzi, Enrico Banfi, Giulia Caneva, A. N Muresan, Fabio Attorre, Chiara Suanno, E Cicinelli, Riccardo Guarino, Andrea Lallai, F Mascia, Antonella Canini, Consolata Siniscalco, G Concu, L Faino, Chiara Catalano, Giuseppe Brundu, S. Bonacquisti, Laura Celesti-Grapow, G Meloni, Capotorti, G, Bonacquisti, S, Abis, L, Aloisi, I, Attorre, F, Bacaro, G, Balletto, G, Banfi, E, Barni, E, Bartoli, F, Bazzato, E, Beccaccioli, M, Braglia, R, Bretzel, F, Brighetti, MA, Brundu, G, Burnelli, M, Calfapietra, C, Cambria, VE, Caneva, G, Canini, A, Caronni, S, Castello, M, Catalano, C, Celesti-Grapow, L, Cicinelli, E, Cipriani, L, Citterio, S, Concu, G, Coppi, A, Corona, E, Del Duca, S, Del, Vico E, Di Gristina, E, Domina, G, Faino, L, Fano, EA, Fares, S, Farris, E, Farris, S, Fornaciari, M, Gaglio, M, Galasso, G, Galletti, M, Gargano, ML, Gentili, R, Giannotta, AP, Guarino, C, Guarino, R, Iaquinta, G, Iiriti, G, Lallai, A, Lallai, E, Lattanzi, E, Manca, S, Manes, F, Marignani, M, Marinangeli, F, Mariotti, M, Mascia, F, Mazzola, P, Meloni, G, Michelozzi, P, Miraglia, A, Montagnani, C, Mundula, L, Muresan, AN, Musanti, F, Nardini, A, Nicosia, E, Oddi, L, Orlandi, F, Pace, R, Palumbo, ME, Palumbo, S, Parrotta, L, Pasta, S, Perini, K, Poldini, L, Postiglione, A, Prigioniero, A, Proietti, C, Raimondo, FM, Ranfa, A, Redi, EL, Reverberi, M, Roccotiello, E, Ruga, L, Savo, V, Scarano, P, Schirru, F, Sciarrillo, R, Scuderi, F, Sebastiani, A, Siniscalco, C, Sordo, A, Suanno, C, Tartaglia, M, Tilia, A, Toffolo, C, Toselli, E, Travaglini, A, Ventura, F, Venturella, G, Vincenzi, F, Blasi, C, Brighetti, M. A, Cambria, V. E, Fano, E. A, Gargano, M. L, Giannotta, A. P, Muresan, A. N, Palumbo, M. E, Raimondo, F. M, Redi, E. L, Brighetti, M, Cambria, V, Del, V, Fano, E, Gargano, M, Giannotta, A, Muresan, A, Palumbo, M, Raimondo, F, Redi, E, Capotorti G., Bonacquisti S., Abis L., Aloisi I., Attorre F., Bacaro G., Balletto G., Banfi E., Barni E., Bartoli F., Bazzato E., Beccaccioli M., Braglia R., Bretzel F., Brighetti M.A., Brundu G., Burnelli M., Calfapietra C., Cambria V.E., Caneva G., Canini A., Caronni S., Castello M., Catalano C., Celesti-Grapow L., Cicinelli E., Cipriani L., Citterio S., Concu G., Coppi A., Corona E., Del Duca S., Del V.E., Di Gristina E., Domina G., Faino L., Fano E.A., Fares S., Farris E., Farris S., Fornaciari M., Gaglio M., Galasso G., Galletti M., Gargano M.L., Gentili R., Giannotta A.P., Guarino C., Guarino R., Iaquinta G., Iiriti G., Lallai A., Lallai E., Lattanzi E., Manca S., Manes F., Marignani M., Marinangeli F., Mariotti M., Mascia F., Mazzola P., Meloni G., Michelozzi P., Miraglia A., Montagnani C., Mundula L., Muresan A.N., Musanti F., Nardini A., Nicosia E., Oddi L., Orlandi F., Pace R., Palumbo M.E., Palumbo S., Parrotta L., Pasta S., Perini K., Poldini L., Postiglione A., Prigioniero A., Proietti C., Raimondo F.M., Ranfa A., Redi E.L., Reverberi M., Roccotiello E., Ruga L., Savo V., Scarano P., Schirru F., Sciarrillo R., Scuderi F., Sebastiani A., Siniscalco C., Sordo A., Suanno C., Tartaglia M., Tilia A., Toffolo C., Toselli E., Travaglini A., Ventura F., Venturella G., Vincenzi F., Blasi C., Brighetti, Ma, Cambria, Ve, Del Vico, E, Fano, Ea, Gargano, Ml, Giannotta, Ap, Muresan, An, Palumbo, Me, Raimondo, Fm, and Redi, El
- Subjects
urban green areas ,2019-20 coronavirus outbreak ,010504 meteorology & atmospheric sciences ,Coronavirus disease 2019 (COVID-19) ,Ecosystem service ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Settore BIO/02 ,Ecosystem services, green infrastructure, human well-being, urban biodiversity, urban green areas ,Plant Science ,010501 environmental sciences ,Ecosystem services, Human well-being, Green infrastructure, Urban green areas, Urban biodiversity ,01 natural sciences ,urban biodiversity ,Ecosystem services ,Green infrastructure, Urban green area ,Environmental planning ,human well-being ,Human well-being ,Green infrastructure, Urban green areas ,Urban biodiversity ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences ,urban green area ,Settore BIO/02 - Botanica Sistematica ,Ambientale ,Geography ,green infrastructure ,Settore BIO/03 - Botanica Ambientale E Applicata ,Green infrastructure - Abstract
According to projects and practices that the Italian botanists and ecologists are carrying out for bringing “more nature in the city”, new insights for a factual integration between ecological perspectives and more consolidated aesthetic and agronomic approaches to the sustainable planning and management of urban green areas are provided.
- Published
- 2020
- Full Text
- View/download PDF
14. Biochemical and cytological interactions between callose synthase and microtubules in the tobacco pollen tube
- Author
-
LUIGI PARROTTA, Claudia Faleri, Cecilia Del Casino, Lavinia Mareri, Iris Aloisi, Gea Guerriero, Jean-Francois Hausman, Stefano Del Duca, Giampiero Cai, Parrotta L., Faleri C., Del Casino C., Mareri L., Aloisi I., Guerriero G., Hausman J.-F., Del Duca S., and Cai G.
- Subjects
Callose ,food and beverages ,Microtubule ,macromolecular substances ,Plant Science ,General Medicine ,Actin filaments ,Callose synthase ,Pollen tube ,Microtubules ,Glucosyltransferases ,Tubulin ,Tobacco ,Actin filament ,Agronomy and Crop Science - Abstract
Key message The article concerns the association between callose synthase and cytoskeleton by biochemical and ultrastructural analyses in the pollen tube. Results confirmed this association and immunogold labeling showed a colocalization. Abstract Callose is a cell wall polysaccharide involved in fundamental biological processes, from plant development to the response to abiotic and biotic stress. To gain insight into the deposition pattern of callose, it is important to know how the enzyme callose synthase is regulated through the interaction with the vesicle-cytoskeletal system. Actin filaments likely determine the long-range distribution of callose synthase through transport vesicles but the spatial/biochemical relationships between callose synthase and microtubules are poorly understood, although experimental evidence supports the association between callose synthase and tubulin. In this manuscript, we further investigated the association between callose synthase and microtubules through biochemical and ultrastructural analyses in the pollen tube model system, where callose is an essential component of the cell wall. Results by native 2-D electrophoresis, isolation of callose synthase complex and far-western blot confirmed that callose synthase is associated with tubulin and can therefore interface with cortical microtubules. In contrast, actin and sucrose synthase were not permanently associated with callose synthase. Immunogold labeling showed colocalization between the enzyme and microtubules, occasionally mediated by vesicles. Overall, the data indicate that pollen tube callose synthase exerts its activity in cooperation with the microtubular cytoskeleton.
- Published
- 2022
- Full Text
- View/download PDF
15. Distinct Tomato Cultivars Are Characterized by a Differential Pattern of Biochemical Responses to Drought Stress
- Author
-
Veronica Conti, Claudio Cantini, Marco Romi, Maria Michela Cesare, Luigi Parrotta, Stefano Del Duca, Giampiero Cai, Conti V., Cantini C., Romi M., Cesare M.M., Parrotta L., Del Duca S., and Cai G.
- Subjects
dehydrin ,Ribulose-Bisphosphate Carboxylase ,Catalysis ,Inorganic Chemistry ,Solanum lycopersicum ,CYP ,aquaporins ,Physical and Theoretical Chemistry ,Lycopersicon esculentum ,Molecular Biology ,Spectroscopy ,HSP70 ,Drought ,Organic Chemistry ,fungi ,RuBisCO ,SuSy ,food and beverages ,General Medicine ,Plant ,Plants ,Droughts ,Computer Science Applications ,aquaporin ,Plant Breeding ,osmotin - Abstract
Future climate scenarios suggest that crop plants will experience environmental changes capable of affecting their productivity. Among the most harmful environmental stresses is drought, defined as a total or partial lack of water availability. It is essential to study and understand both the damage caused by drought on crop plants and the mechanisms implemented to tolerate the stress. In this study, we focused on four cultivars of tomato, an economically important crop in the Mediterranean basin. We investigated the biochemical mechanisms of plant defense against drought by focusing on proteins specifically involved in this stress, such as osmotin, dehydrin, and aquaporin, and on proteins involved in the general stress response, such as HSP70 and cyclophilins. Since sugars are also known to act as osmoprotectants in plant cells, proteins involved in sugar metabolism (such as RuBisCO and sucrose synthase) were also analyzed. The results show crucial differences in biochemical behavior among the selected cultivars and highlight that the most tolerant tomato cultivars adopt quite specific biochemical strategies such as different accumulations of aquaporins and osmotins. The data set also suggests that RuBisCO isoforms and aquaporins can be used as markers of tolerance/susceptibility to drought stress and be used to select tomato cultivars within breeding programs.
- Published
- 2022
- Full Text
- View/download PDF
16. Allergenic risk assessment of urban parks: Towards a standard index
- Author
-
Chiara Suanno, Iris Aloisi, Stefano Del Duca, Delia Fernández-González, Luigi Parrotta, Suanno C., Aloisi I., Parrotta L., Fernandez-Gonzalez D., and Del Duca S.
- Subjects
Index (economics) ,Parks, Recreational ,010501 environmental sciences ,01 natural sciences ,Biochemistry ,Risk Assessment ,Trees ,03 medical and health sciences ,Urban park ,0302 clinical medicine ,Environmental health ,Humans ,Botanical garden ,030212 general & internal medicine ,0105 earth and related environmental sciences ,General Environmental Science ,Data collection ,Allergen ,Urban vegetation ,Systematic sampling ,Vegetation ,Census ,Allergens ,Ecological index ,Geography ,Allergenicity ,SAI ,Pollen ,UGZA ,Risk assessment ,Tree ,Pollen allergy ,Human - Abstract
Allergenicity indices are a powerful tool to assess the health hazard posed by urban parks to pollen allergic subjects. Nonetheless, only few indices have been developed and applied to urban vegetation in the last decade, and they were never compared nor standardised over the same dataset. To address this issue, in this paper the two best-known allergenicity indices, the Urban Green Zones Allergenicity Index (IUGZA) and the Specific Allergenicity Index (SAI), have been calculated for the same park (the Botanical Garden of Bologna), collecting vegetation data through both systematic sampling and arboreal census. The results obtained with the two data collection methods were comparable for both indices, indicating systematic sampling as a reliable approximation of the total census. Besides, the allergenic risk resulted moderate to high according to SAI, and very low according to IUGZA. Since SAI does not consider the total volume of the vegetation, it was deemed less reliable than IUGZA in evaluating the allergenicity of an enclosed green space.
- Published
- 2021
17. Environmental Stress and Plants
- Author
-
Lavinia Mareri, Luigi Parrotta, Giampiero Cai, Mareri L., Parrotta L., and Cai G.
- Subjects
Drought ,Organic Chemistry ,Plant ,General Medicine ,abiotic and biotic stresses, plant response, plant adaptation, multidisciplinary approaches ,Plants ,Sodium Chloride ,multidisciplinary approaches ,Adaptation, Physiological ,Catalysis ,abiotic and biotic stresses ,plant adaptation ,Droughts ,Computer Science Applications ,Inorganic Chemistry ,Stress, Physiological ,multidisciplinary approache ,Physical and Theoretical Chemistry ,abiotic and biotic stresse ,Molecular Biology ,plant response ,Spectroscopy - Abstract
Land plants are constantly subjected to multiple unfavorable or even adverse environmental conditions. Among them, abiotic stresses (such as salt, drought, heat, cold, heavy metals, ozone, UV radiation, and nutrient deficiencies) have detrimental effects on plant growth and productivity and are increasingly important considering the direct or indirect effects of climate change. Plants respond in many ways to abiotic stresses, from gene expression to physiology, from plant architecture to primary, and secondary metabolism. These complex changes allow plants to tolerate and/or adapt to adverse conditions. The complexity of plant response can be further influenced by the duration and intensity of stress, the plant genotype, the combination of different stresses, the exposed tissue and cell type, and the developmental stage at which plants perceive the stress. It is therefore important to understand more about how plants perceive stress conditions and how they respond and adapt (both in natural and anthropogenic environments). These concepts were the basis of the Special Issue that International Journal of Molecular Sciences expressly addressed to the relationship between environmental stresses and plants and that resulted in the publication of 5 reviews and 38 original research articles. The large participation of several authors and the good number of contributions testifies to the considerable interest that the topic currently receives in the plant science community, especially in the light of the foreseeable climate changes. Here, we briefly summarize the contributions included in the Special Issue, both original articles categorized by stress type and reviews that discuss more comprehensive responses to various stresses.
- Published
- 2022
- Full Text
- View/download PDF
18. Plant Transglutaminases: New Insights in Biochemistry, Genetics, and Physiology
- Author
-
Luigi Parrotta, Umesh Kumar Tanwar, Iris Aloisi, Ewa Sobieszczuk-Nowicka, Magdalena Arasimowicz-Jelonek, Stefano Del Duca, Parrotta L., Tanwar U.K., Aloisi I., Sobieszczuk-Nowicka E., Arasimowicz-Jelonek M., and Del Duca S.
- Subjects
plant transglutaminase ,Chloroplasts ,Transglutaminases ,integumentary system ,bioinformatic ,Animal ,fungi ,physiological role ,food and beverages ,Plant ,General Medicine ,Plants ,Chloroplast ,biochemical feature ,Cell Wall ,Animals ,Phylogeny - Abstract
Transglutaminases (TGases) are calcium-dependent enzymes that catalyse an acyl-transfer reaction between primary amino groups and protein-bound Gln residues. They are widely distributed in nature, being found in vertebrates, invertebrates, microorganisms, and plants. TGases and their functionality have been less studied in plants than humans and animals. TGases are distributed in all plant organs, such as leaves, tubers, roots, flowers, buds, pollen, and various cell compartments, including chloroplasts, the cytoplasm, and the cell wall. Recent molecular, physiological, and biochemical evidence pointing to the role of TGases in plant biology and the mechanisms in which they are involved allows us to consider their role in processes such as photosynthesis, plant fertilisation, responses to biotic and abiotic stresses, and leaf senescence. In the present paper, an in-depth description of the biochemical characteristics and a bioinformatics comparison of plant TGases is provided. We also present the phylogenetic relationship, gene structure, and sequence alignment of TGase proteins in various plant species, not described elsewhere. Currently, our knowledge of these proteins in plants is still insufficient. Further research with the aim of identifying and describing the regulatory components of these enzymes and the processes regulated by them is needed.
- Published
- 2022
- Full Text
- View/download PDF
19. More tolerant than expected: Taking into account the ability of Cladonia portentosa to cope with increased nitrogen availability in environmental policy
- Author
-
Luca Bini, Lucy J. Sheppard, Luigi Parrotta, Ian D. Leith, Claudia Faleri, Cristina Branquinho, Cristina Cruz, Giampiero Cai, Silvana Munzi, Assunta Gagliardi, Repositório da Universidade de Lisboa, Munzi S., Cruz C., Branquinho C., Cai G., Faleri C., Parrotta L., Bini L., Gagliardi A., Leith I.D., and Sheppard L.J.
- Subjects
0106 biological sciences ,Proteomics ,General Decision Sciences ,chemistry.chemical_element ,Algal ultrastructure ,Critical loads and levels ,Long-term exposure ,Physiological response ,Photosynthetic parameters ,010501 environmental sciences ,Photosynthesis ,010603 evolutionary biology ,01 natural sciences ,Isotopic signature ,Ecosystem ,Lichen ,Bog ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences ,geography ,geography.geographical_feature_category ,Ecology ,biology ,Chemistry ,Photosynthetic parameter ,biology.organism_classification ,Nitrogen ,Deposition (aerosol physics) ,13. Climate action ,Environmental chemistry ,Critical loads and level ,Cladonia portentosa - Abstract
The lichen Cladonia portentosa is generally considered to be sensitive to increased environmental nitrogen (N) deposition. However, the presence of this lichen in impacted environments suggests that it can cope with prolonged exposure to high N availability. To test the tolerance of this species to N, photosynthetic parameters, carbon and N concentrations and isotopic signature, chitin concentration, surface pH and extracellular enzymatic activity were measured in samples exposed for 11 years to different N doses and forms at the Whim bog N manipulation experimental site (United Kingdom). The results showed that C. portentosa is tolerant to long-term exposure to wet N deposition, maintaining its functionality with almost unaltered physiological parameters. The comparison of the proteome of short- and long-term exposed samples showed similar changes in protein expression suggesting that mechanisms to cope with N are not dependent on the exposure time even after more than a decade. Since empirical N Critical Loads are based on the response of sensitive components of the ecosystem, like C. portentosa, its capacity to cope with short- and long-term exposure to N needs to be recognized and taken into account when setting them, likewise, the significance of the form of N., Investigador - Fundação para Ciência e Tecnologia (FCT) contract and the FCT projects IF/00964/2013 and UID/BIA/00329/2013 (2015–2018).
- Published
- 2020
20. Temperature-Dependent Compatible and Incompatible Pollen-Style Interactions in Citrus clementina Hort. ex Tan. Show Different Transglutaminase Features and Polyamine Pattern
- Author
-
Iris Aloisi, Stefania Bennici, Lavinia Mareri, Luigi Parrotta, Claudia Faleri, Giulia Potente, Stefano Del Duca, Giampiero Cai, Gaetano Distefano, Fabiana Antognoni, Alessandra Gentile, Aloisi I., Distefano G., Antognoni F., Potente G., Parrotta L., Faleri C., Gentile A., Bennici S., Mareri L., Cai G., and Del Duca S.
- Subjects
0106 biological sciences ,0301 basic medicine ,polyamines ,Ovary (botany) ,Plant Science ,Citrus clementine ,plant reproduction ,pollen tube growth ,self-incompatibility ,transglutaminase ,lcsh:Plant culture ,medicine.disease_cause ,Parthenocarpy ,01 natural sciences ,03 medical and health sciences ,polyamine ,Pollen ,medicine ,lcsh:SB1-1110 ,Cell wall modification ,PEAR ,Chemistry ,food and beverages ,Seedless fruit ,Horticulture ,030104 developmental biology ,Pollen tube ,Clementine ,010606 plant biology & botany - Abstract
In clementine, failure of fertilization can result in parthenocarpic fruit development, which has several advantages, such as seedless fruit, longer shelf-life, and greater consumer appeal. Recently, S-RNases have been identified in Citrus grandis, thus revealing that the self-incompatibility (SI) reaction relies on the S-RNase gametophytic mechanism. The fundamental role of environmental factors, mostly temperature, in determining the numbers of pollen tubes reaching the ovary is also well established in Citrus. In the present work, temperature-dependent pollen–pistil interactions in C. clementina were analyzed, focusing on several morphological aspects, as well as on polyamine (PA) content and the activity and distribution of transglutaminase (TGase), both reported to be involved in the SI response in pear and in pummelo. Results clearly indicate that temperature contributed to a different activation of the SI response, which occurs at optimal temperature of 25°C but was by-passed at 15°C. TGase activity was stimulated during the SI response, and it localized differently in the compatible and incompatible interaction: in compatible pollinated styles, TGase localized inside the style canal, while it was detected all around it in incompatible crosses. TGase localization and activity were congruent with the levels of soluble and insoluble conjugated PAs and with morphological evidences, which highlighted cell wall modification occurring as a result of SI.
- Published
- 2020
- Full Text
- View/download PDF
21. Chronic heat stress affects the photosynthetic apparatus of Solanum lycopersicum L. cv Micro-Tom
- Author
-
Iris Aloisi, Marco Romi, Claudia Faleri, S. Del Duca, Giampiero Cai, Luigi Parrotta, Parrotta L., Aloisi I., Faleri C., Romi M., Del Duca S., and Cai G.
- Subjects
0106 biological sciences ,0301 basic medicine ,Chlorophyll b ,Sucrose ,Physiology ,RuBisCo ,Plant Science ,Photosynthetic efficiency ,Heat stre ,Photosynthesis ,01 natural sciences ,Heat stress ,03 medical and health sciences ,chemistry.chemical_compound ,Photosynthesi ,Solanum lycopersicum ,Genetics ,biology ,Abiotic stress ,Metabolism ,RuBisCO ,fungi ,food and beverages ,biology.organism_classification ,Plant Leaves ,Horticulture ,030104 developmental biology ,chemistry ,biology.protein ,Solanum ,Heat-Shock Response ,010606 plant biology & botany - Abstract
Tomato (Solanum lycopersicum L.) is one of the most widely cultivated crops in the world. Tomato is a plant model and the relationship between yield and biotic/abiotic stress has attracted increasing scientific interest. Tomato cultivation under sub-optimal conditions usually negatively impacts growth and development; in particular, heat stress affects several cellular and metabolic processes, such as respiration and photosynthesis. In this work, we studied the effects of chronic heat stress on various cytological and biochemical aspects using the Micro-Tom cultivar as a model. Photosynthetic efficiency decreased during heat stress while levels of post-photosynthetic sugars (sucrose, fructose, glucose and glucose 6-phosphate) oscillated during stress. Similarly, photosynthetic pigments (lutein, chlorophyll a, chlorophyll b and β-carotene) showed an oscillating downward trend with partial recovery during the stress-free phase. The energetic capacity of leaves (e.g. ATP and ADP) was altered, as well as the reactive oxygen species (ROS) profile; the latter increased during stress. Important effects were also found on the accumulation of Rubisco isoforms, which decreased in number. Heat stress also resulted in a decreased accumulation of lipids (oleic and linoleic acid). Photosynthetically alterations were accompanied by cytological changes in leaf structure, particularly in the number of lipid bodies and starch granules. Prolonged heat stress progressively compromised the photosynthetic efficiency of tomato leaves. The present study reports multi-approach information on metabolic and photosynthetic injuries and responses of tomato plants to chronic heat stress, highlighting the plant's ability to adapt to stress.
- Published
- 2020
22. Compatible and Incompatible Pollen-Styles Interaction in Pyrus communis L. Show Different Transglutaminase Features, Polyamine Pattern and Metabolomics Profiles
- Author
-
Manuela Mandrone, Giampiero Cai, Ferruccio Poli, Fabiana Antognoni, Iris Aloisi, Claudia Faleri, Stefano Del Duca, Luigi Parrotta, Giulia Potente, Mandrone M., Antognoni F., Aloisi I., Potente G., Poli F., Cai G., Faleri C., Parrotta L., and Del Duca S.
- Subjects
0106 biological sciences ,0301 basic medicine ,Gynoecium ,Polyamine ,Sucrose ,Pollination ,Tissue transglutaminase ,polyamines ,Plant Science ,Pyrus communis ,lcsh:Plant culture ,medicine.disease_cause ,01 natural sciences ,self-incompatibility ,03 medical and health sciences ,chemistry.chemical_compound ,transglutaminase ,Metabolomics ,Pollen ,medicine ,lcsh:SB1-1110 ,Original Research ,biology ,H NMR-metabolomic ,1H NMR-metabolomics ,biology.organism_classification ,030104 developmental biology ,chemistry ,Biochemistry ,biology.protein ,Pyrus communi ,010606 plant biology & botany - Abstract
Pollen-stigma interaction is a highly selective process, which leads to compatible or incompatible pollination, in the latter case, affecting quantitative and qualitative aspects of productivity in species of agronomic interest. While the genes and the corresponding protein partners involved in this highly specific pollen-stigma recognition have been studied, providing important insights into pollen-stigma recognition in self-incompatible (SI), many other factors involved in the SI response are not understood yet. This work concerns the study of transglutaminase (TGase), polyamines (PAs) pattern and metabolomic profiles following the pollination of Pyrus communis L. pistils with compatible and SI pollen in order to deepen their possible involvement in the reproduction of plants. Immunolocalization, abundance and activity of TGase as well as the content of free, soluble-conjugated and insoluble-bound PAs have been investigated. 1H NMR-profiling coupled with multivariate data treatment (PCA and PLS-DA) allowed to compare, for the first time, the metabolic patterns of not-pollinated and pollinated styles. Results clearly indicate that during the SI response TGase activity increases, resulting in the accumulation of PAs conjugated to hydroxycinnamic acids and other small molecules. Metabolomic analysis showed a remarkable differences between pollinated and not-pollinated styles, where, except for glucose, all the other metabolites where less concentrated. Moreover, styles pollinated with compatible pollen showed the highest amount of sucrose than SI pollinated ones, which, in turn, contained highest amount of all the other metabolites, including aromatic compounds, such as flavonoids and a cynnamoil derivative.
- Published
- 2019
23. Proteins immunologically related to MAP65-1 accumulate and localize differentially during bud development in Vitis vinifera L
- Author
-
Mauro Cresti, Luigi Parrotta, Claudia Faleri, Giampiero Cai, Cai, G, Cresti, M, Faleri, C, and Parrotta, L
- Subjects
0301 basic medicine ,Gene isoform ,Gene Expression ,Plant Science ,Flowers ,MAP65-1 ,Genome ,03 medical and health sciences ,Microtubule ,Tubulin ,Botany ,Tendril ,Bud development ,Protein Isoforms ,Vitis ,Cytoskeleton ,Gene ,Plant Proteins ,Genome annotation ,biology ,Promoter ,Molecular Sequence Annotation ,Cell Biology ,General Medicine ,Cell biology ,Plant Leaves ,Protein Transport ,030104 developmental biology ,biology.protein ,Microtubule-Associated Proteins - Abstract
Various arrays of microtubules are present throughout the plant cell cycle and are involved in distinct functions. Microtubule-associated proteins (MAPs) regulate microtubule dynamics by acting as stabilizers, destabilizers, and promoters of microtubule dynamics. The MAP65 family is a specific group of cross-linkers required for structural maintenance of microtubules. In plants, different isoforms of MAP65 are differentially expressed according to their developmental program. In this work, we analyzed the differential distribution of proteins immunologically related to MAP65-1 during bud development in grapevine (Vitis vinifera L.). First, we annotated the MAP65 genes present in the Vitis genome in order to compare the number and sequence of genes to other species. Subsequently, we focused on a specific isoform (MAP65-1) by characterizing its accumulation and distribution. Proteins were extracted from different organs of Vitis (buds, leaves, flowers, and tendrils), were separated by two-dimensional electrophoresis (2-DE), and were probed by immunoblot with a specific antiserum. We found seven spots immunologically related to MAP65-1, grouped in two distinct clusters, which accumulate differentially according to the developmental stage. In addition, we analyzed the localization of MAP65-1 during three different stages of bud development. Implication of data on the use of different isotypes of MAP65-1 during Vitis development is discussed.
- Published
- 2016
24. Macrocyclic naphthalene diimides as G-quadruplex binders
- Author
-
Stephan A. Ohnmacht, Riccardo Rigo, Federica Moraca, Stefano Alcaro, Stephen Neidle, Claudia Sissi, Chiara Marchetti, Lucia Parrotta, Vincenzo Tumiatti, Mekala Gunaratnam, Anna Minarini, Andrea Milelli, Marchetti, C., Minarini, A., Tumiatti, V., Moraca, F., Parrotta, L., Alcaro, S., Rigo, R., Sissi, C., Gunaratnam, M., Ohnmacht, S.A., Neidle, S., and Milelli, A.
- Subjects
Molecular model ,Stereochemistry ,Cell Survival ,Spermidine ,Clinical Biochemistry ,Static Electricity ,Pharmaceutical Science ,Antineoplastic Agents ,Molecular Dynamics Simulation ,Naphthalenes ,G-quadruplex ,Naphthalene diimide ,Imides ,Biochemistry ,Cell Line ,Docking ,Molecular dynamics ,chemistry.chemical_compound ,Structure-Activity Relationship ,c-KIT ,Cell Line, Tumor ,Drug Discovery ,Molecule ,Telomeric DNA ,Humans ,Molecular Biology ,Tumor ,Binding Sites ,Chemistry ,Drug Discovery3003 Pharmaceutical Science ,Organic Chemistry ,DNA ,DNA, Neoplasm ,G-Quadruplexes ,Molecular Docking Simulation ,Drug Design ,Spermine ,Molecular Medicine ,3003 ,Docking (molecular) ,Duplex (building) ,Neoplasm ,Selectivity - Abstract
The synthesis, biological and molecular modeling evaluation of a series of macrocyclic naphthalene diimides is reported. The present investigation expands on the study of structure–activity relationships of prototype compound 2 by constraining the molecule into a macrocyclic structure with the aim of improving its G-quadruplex binding activity and selectivity. The new derivatives, compounds 4 – 7 carry spermidine- and spermine-like linkers while in compound 8 the inner basic nitrogen atoms of spermine have been replaced with oxygen atoms. The design strategy has led to potent compounds stabilizing both human telomeric (F21T) and c-KIT2 quadruplex sequences, and high selectivity for quadruplex in comparison to duplex DNA. Antiproliferative effects of the new derivatives 4 – 8 have been evaluated in a panel of cancer cell lines and all the tested compounds showed activity in the low micromolar or sub-micromolar range of concentrations. In order to rationalize the molecular basis of the DNA G-quadruplex versus duplex recognition preference, docking and molecular dynamics studies have been performed. The computational results support the observation that the main driving force in the recognition is due to electrostatic factors.
- Published
- 2014
25. Accumulation and post-translational modifications of plant tubulins
- Author
-
Giampiero Cai, Mauro Cresti, Luigi Parrotta, Parrotta, L, Cresti, M., and Cai, G.
- Subjects
Gene isoform ,Protein subunit ,Microtubule ,macromolecular substances ,Plant Science ,Microtubules ,Models, Biological ,Plant cell ,Tubulin ,Cytoskeleton ,Ecology, Evolution, Behavior and Systematics ,Plant Proteins ,biology ,Medicine (all) ,Plant Protein ,General Medicine ,Plant ,Plants ,plant cell ,post-translational modification ,Ecology, Evolution, Behavior and Systematic ,Cytoplasmic streaming ,Cell biology ,Spindle apparatus ,biology.protein ,Post-translational modification ,Protein Processing, Post-Translational - Abstract
The microtubular cytoskeleton of plant cells provides support for several functions (including the anchoring of proteins, assembly of the mitotic spindle, cytoplasmic streaming and construction of cell walls). Both α- and β-tubulins are encoded through multigene families that are differentially expressed in different organs and tissues. To increase the variability of expression, both protein subunits are subjected to post-translational modifications, which could contribute to the assembly of specific microtubule structures. This review aims to highlight the role of specific post-translational modifications of tubulin in plant cells. We initially describe the expression and accumulation of α- and β-tubulin isoforms in different plants and at different stages of plant development. Second, we discuss the different types of post-translational modifications that, by adding or removing specific functional groups, increase the isoform heterogeneity and functional variability of tubulin. Modifications are proposed to form a 'code' that can be read by proteins interacting with microtubules. Therefore, the subpopulations of microtubules may bind to different associated proteins (motor and non-motor), thus creating the physical support for various microtubule functions. © 2013 German Botanical Society and The Royal Botanical Society of the Netherlands.
- Published
- 2014
26. Environmental Stress and Plants 2.0.
- Author
-
Parrotta L, Mareri L, and Cai G
- Subjects
- Plants, Stress, Physiological
- Abstract
Following the success of our previous edition [...].
- Published
- 2023
- Full Text
- View/download PDF
27. Editorial: Polyamines and longevity - role of polyamine in plant survival.
- Author
-
Parrotta L, Sobieszczuk-Nowicka E, and Cai G
- Abstract
Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
- Published
- 2023
- Full Text
- View/download PDF
28. Tomato Biodiversity and Drought Tolerance: A Multilevel Review.
- Author
-
Conti V, Parrotta L, Romi M, Del Duca S, and Cai G
- Subjects
- Drought Resistance, Proteomics, Stress, Physiological genetics, Droughts, Solanum lycopersicum genetics
- Abstract
Ongoing global climate change suggests that crops will be exposed to environmental stresses that may affect their productivity, leading to possible global food shortages. Among these stresses, drought is the most important contributor to yield loss in global agriculture. Drought stress negatively affects various physiological, genetic, biochemical, and morphological characteristics of plants. Drought also causes pollen sterility and affects flower development, resulting in reduced seed production and fruit quality. Tomato ( Solanum lycopersicum L.) is one of the most economically important crops in different parts of the world, including the Mediterranean region, and it is known that drought limits crop productivity, with economic consequences. Many different tomato cultivars are currently cultivated, and they differ in terms of genetic, biochemical, and physiological traits; as such, they represent a reservoir of potential candidates for coping with drought stress. This review aims to summarize the contribution of specific physio-molecular traits to drought tolerance and how they vary among tomato cultivars. At the genetic and proteomic level, genes encoding osmotins, dehydrins, aquaporins, and MAP kinases seem to improve the drought tolerance of tomato varieties. Genes encoding ROS-scavenging enzymes and chaperone proteins are also critical. In addition, proteins involved in sucrose and CO
2 metabolism may increase tolerance. At the physiological level, plants improve drought tolerance by adjusting photosynthesis, modulating ABA, and pigment levels, and altering sugar metabolism. As a result, we underline that drought tolerance depends on the interaction of several mechanisms operating at different levels. Therefore, the selection of drought-tolerant cultivars must consider all these characteristics. In addition, we underline that cultivars may exhibit distinct, albeit overlapping, multilevel responses that allow differentiation of individual cultivars. Consequently, this review highlights the importance of tomato biodiversity for an efficient response to drought and for preserving fruit quality levels.- Published
- 2023
- Full Text
- View/download PDF
29. The First Latin American Consensus on Superficial and Perforating Venous Mapping.
- Author
-
Bottini O, Rodriguez Santos F, Boroda A, Arias F, Calcina D, Agüero Wagner C, Grillo L, Morales Bazurto M, Santiago F, Nigro J, Morales M, Ferreyra M, Perea Ansinelli A, Diaz M, Segura J, Mazzurco M, Diez G, Halusch E, Ovelar J, Parrotta L, Fernandez J, Avramovic M, Ríos J, Esposito A, Alfonso H, Desjardins E, Arias L, Joviliano E, Toledo DE Aguiar E, Barreto Dos Santos J, Orrego A, Bombín J, Pizarro I, Cabezas J, Manosalvas R, Villota V, Rodriguez L, Martínez Granados A, Mérida J, García Bernard D, Serralde J, Vega Rasgado F, Teixeira E, Filizzola R, Corbeta R, Benito R, Chunga Prieto J, Rivera T, Volpi M, Sarutte S, Ortiz P, Prego A, Navas H, Alberti T, Guglielmone D, Mejía R, Simkin C, Intriago E, and Bercovich J
- Subjects
- Humans, Consensus, Latin America, Vascular Surgical Procedures, Veins diagnostic imaging, Ultrasonography, Doppler, Duplex methods
- Abstract
With the aim of obtaining a map which is useful as a diagnostic tool and therapeutical orientation, complementing the written report of duplex ultrasound venous study, Latin-American Scientific Societies of Phlebology, Vascular Surgery and Vascular Imaging were invited to participate, through their regional representatives, to the First Consensus of Superficial and Perforating Venous Mapping. A consensus process using a modified Delphi method was carried out. An International Working Group was formed, which developed a Prototype of the Venous Mapping that worked as a starting point for consensus, and was presented in a first virtual meeting of 54 experts (societies' representatives) when the methodology was explained. For the consensus process, two rounds of self-administrated questionnaires with feedback were used. In the first questionnaire a 100% consensus was obtained in the 15 statements (an agreement range of 85.2% to 100%) In the analysis of qualitative data, three categories according to the actions to implement were identified - actions which involved no action, minor changes and major changes. This analysis was used to build the second questionnaire, which reached a consensus in its six statements (agreement range of 87.1% to 98.1%). A final consensus on every field proposed was established with the approval of all the experts consulted and it was presented at a third online meeting. The document of the superficial and perforating venous mapping reached by consensus is presented hereafter.
- Published
- 2023
- Full Text
- View/download PDF
30. Small extracellular vesicles released from germinated kiwi pollen (pollensomes) present characteristics similar to mammalian exosomes and carry a plant homolog of ALIX.
- Author
-
Suanno C, Tonoli E, Fornari E, Savoca MP, Aloisi I, Parrotta L, Faleri C, Cai G, Coveney C, Boocock DJ, Verderio EAM, and Del Duca S
- Abstract
Introduction: In the last decade, it has been discovered that allergen-bearing extracellular nanovesicles, termed "pollensomes", are released by pollen during germination. These extracellular vesicles (EVs) may play an important role in pollen-pistil interaction during fertilization, stabilizing the secreted bioactive molecules and allowing long-distance signaling. However, the molecular composition and the biological role of these EVs are still unclear. The present study had two main aims: (I) to clarify whether pollen germination is needed to release pollensomes, or if they can be secreted also in high humidity conditions; and (II) to investigate the molecular features of pollensomes following the most recent guidelines for EVs isolation and identification., Methods: To do so, pollensomes were isolated from hydrated and germinated kiwi ( Actinidia chinensis Planch.) pollen, and characterized using imaging techniques, immunoblotting, and proteomics., Results: These analyses revealed that only germinated kiwi pollen released detectable concentrations of nanoparticles compatible with small EVs for shape and protein content. Moreover, a plant homolog of ALIX, which is a well-recognized and accepted marker of small EVs and exosomes in mammals, was found in pollensomes., Discussion: The presence of this protein, along with other proteins involved in endocytosis, is consistent with the hypothesis that pollensomes could comprehend a prominent subpopulation of plant exosome-like vesicles., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Suanno, Tonoli, Fornari, Savoca, Aloisi, Parrotta, Faleri, Cai, Coveney, Boocock, Verderio and Del Duca.)
- Published
- 2023
- Full Text
- View/download PDF
31. Expression of Clementine Asp-Rich Proteins (CcASP-RICH) in Tobacco Plants Interferes with the Mechanism of Pollen Tube Growth.
- Author
-
Parrotta L, Mareri L, Aloisi I, Faleri C, Distefano G, Gentile A, Lo Piero AR, Kriechbaumer V, Caruso M, Cai G, and Del Duca S
- Subjects
- Cell Wall metabolism, Cytoskeleton metabolism, Pollination, Nicotiana genetics, Citrus, Pollen Tube
- Abstract
Low-molecular-weight, aspartic-acid-rich proteins (ASP-RICH) have been assumed to be involved in the self-incompatibility process of clementine. The role of ASP-RICH is not known, but hypothetically they could sequester calcium ions (Ca
2+ ) and affect Ca2+ -dependent mechanisms. In this article, we analyzed the effects induced by clementine ASP-RICH proteins (CcASP-RICH) when expressed in the tobacco heterologous system, focusing on the male gametophyte. The aim was to gain insight into the mechanism of action of ASP-RICH in a well-known cellular system, i.e., the pollen tube. Pollen tubes of tobacco transgenic lines expressing CcASP-RICH were analyzed for Ca2+ distribution, ROS, proton gradient, as well as cytoskeleton and cell wall. CcASP-RICH modulated Ca2+ content and consequently affected cytoskeleton organization and the deposition of cell wall components. In turn, this affected the growth pattern of pollen tubes. Although the expression of CcASP-RICH did not exert a remarkable effect on the growth rate of pollen tubes, effects at the level of growth pattern suggest that the expression of ASP-RICH may exert a regulatory action on the mechanism of plant cell growth.- Published
- 2022
- Full Text
- View/download PDF
32. Allergenic risk assessment of urban parks: Towards a standard index.
- Author
-
Suanno C, Aloisi I, Parrotta L, Fernández-González D, and Del Duca S
- Subjects
- Humans, Pollen, Risk Assessment, Trees, Allergens, Parks, Recreational
- Abstract
Allergenicity indices are a powerful tool to assess the health hazard posed by urban parks to pollen allergic subjects. Nonetheless, only few indices have been developed and applied to urban vegetation in the last decade, and they were never compared nor standardised over the same dataset. To address this issue, in this paper the two best-known allergenicity indices, the Urban Green Zones Allergenicity Index (I
UGZA ) and the Specific Allergenicity Index (SAI), have been calculated for the same park (the Botanical Garden of Bologna), collecting vegetation data through both systematic sampling and arboreal census. The results obtained with the two data collection methods were comparable for both indices, indicating systematic sampling as a reliable approximation of the total census. Besides, the allergenic risk resulted moderate to high according to SAI, and very low according to IUGZA . Since SAI does not consider the total volume of the vegetation, it was deemed less reliable than IUGZA in evaluating the allergenicity of an enclosed green space., (Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.)- Published
- 2021
- Full Text
- View/download PDF
33. Insights into the Mechanisms of Heat Priming and Thermotolerance in Tobacco Pollen.
- Author
-
Mareri L, Faleri C, Aloisi I, Parrotta L, Del Duca S, and Cai G
- Subjects
- Plant Proteins genetics, Pollen Tube genetics, Nicotiana genetics, Hot Temperature, Plant Proteins metabolism, Pollen Tube metabolism, Reactive Oxygen Species metabolism, Thermotolerance, Nicotiana metabolism
- Abstract
Global warming leads to a progressive rise in environmental temperature. Plants, as sessile organisms, are threatened by these changes; the male gametophyte is extremely sensitive to high temperature and its ability to preserve its physiological status under heat stress is known as acquired thermotolerance. This latter can be achieved by exposing plant to a sub-lethal temperature (priming) or to a progressive increase in temperature. The present research aims to investigate the effects of heat priming on the functioning of tobacco pollen grains. In addition to evaluating basic physiological parameters (e.g., pollen viability, germination and pollen tube length), several aspects related to a correct pollen functioning were considered. Calcium (Ca
2+ ) level, reactive oxygen species (ROS) and related antioxidant systems were investigated, also to the organization of actin filaments and cytoskeletal protein such as tubulin (including tyrosinated and acetylated isoforms) and actin. We also focused on sucrose synthase (Sus), a key metabolic enzyme and on the content of main soluble sugars, including UDP-glucose. Results here obtained showed that a pre-exposure to sub-lethal temperatures can positively enhance pollen performance by altering its metabolism. This can have a considerable impact, especially from the point of view of breeding strategies aimed at improving crop species.- Published
- 2021
- Full Text
- View/download PDF
34. Temperature-Dependent Compatible and Incompatible Pollen-Style Interactions in Citrus clementina Hort. ex Tan. Show Different Transglutaminase Features and Polyamine Pattern.
- Author
-
Aloisi I, Distefano G, Antognoni F, Potente G, Parrotta L, Faleri C, Gentile A, Bennici S, Mareri L, Cai G, and Del Duca S
- Abstract
In clementine, failure of fertilization can result in parthenocarpic fruit development, which has several advantages, such as seedless fruit, longer shelf-life, and greater consumer appeal. Recently, S-RNases have been identified in Citrus grandis , thus revealing that the self-incompatibility (SI) reaction relies on the S-RNase gametophytic mechanism. The fundamental role of environmental factors, mostly temperature, in determining the numbers of pollen tubes reaching the ovary is also well established in Citrus . In the present work, temperature-dependent pollen-pistil interactions in C. clementina were analyzed, focusing on several morphological aspects, as well as on polyamine (PA) content and the activity and distribution of transglutaminase (TGase), both reported to be involved in the SI response in pear and in pummelo. Results clearly indicate that temperature contributed to a different activation of the SI response, which occurs at optimal temperature of 25°C but was by-passed at 15°C. TGase activity was stimulated during the SI response, and it localized differently in the compatible and incompatible interaction: in compatible pollinated styles, TGase localized inside the style canal, while it was detected all around it in incompatible crosses. TGase localization and activity were congruent with the levels of soluble and insoluble conjugated PAs and with morphological evidences, which highlighted cell wall modification occurring as a result of SI., (Copyright © 2020 Aloisi, Distefano, Antognoni, Potente, Parrotta, Faleri, Gentile, Bennici, Mareri, Cai and Del Duca.)
- Published
- 2020
- Full Text
- View/download PDF
35. A low molecular-weight cyclophilin localizes in different cell compartments of Pyrus communis pollen and is released in vitro under Ca 2+ depletion.
- Author
-
Parrotta L, Aloisi I, Suanno C, Faleri C, Kiełbowicz-Matuk A, Bini L, Cai G, and Del Duca S
- Subjects
- Microscopy, Immunoelectron, Pollen metabolism, Calcium metabolism, Cyclophilins metabolism, Pyrus metabolism
- Abstract
Cyclophilins (CyPs) are ubiquitous proteins involved in a wide variety of processes including protein maturation and trafficking, receptor complex stabilization, apoptosis, receptor signaling, RNA processing, and spliceosome assembly. The ubiquitous presence is justified by their peptidyl-prolyl cis-trans isomerase (PPIase) activity, catalyzing the rotation of X-Pro peptide bonds from a cis to a trans conformation, a critical rate-limiting step in protein folding, as over 90% of proteins contain trans prolyl imide bonds. In Arabidopsis 35 CyPs involved in plant development have been reported, showing different subcellular localizations and tissue- and stage-specific expression. In the present work, we focused on the localization of CyPs in pear (Pyrus communis) pollen, a model system for studies on pollen tube elongation and on pollen-pistil self-incompatibility response. Fluorescent, confocal and immuno-electron microscopy showed that this protein is present in the cytoplasm, organelles and cell wall, as confirmed by protein fractionation. Moreover, an 18-kDa CyP isoform was specifically released extracellularly when pear pollen was incubated with the Ca
2+ chelator EGTA., (Copyright © 2019 Elsevier Masson SAS. All rights reserved.)- Published
- 2019
- Full Text
- View/download PDF
36. Compatible and Incompatible Pollen-Styles Interaction in Pyrus communis L. Show Different Transglutaminase Features, Polyamine Pattern and Metabolomics Profiles.
- Author
-
Mandrone M, Antognoni F, Aloisi I, Potente G, Poli F, Cai G, Faleri C, Parrotta L, and Del Duca S
- Abstract
Pollen-stigma interaction is a highly selective process, which leads to compatible or incompatible pollination, in the latter case, affecting quantitative and qualitative aspects of productivity in species of agronomic interest. While the genes and the corresponding protein partners involved in this highly specific pollen-stigma recognition have been studied, providing important insights into pollen-stigma recognition in self-incompatible (SI), many other factors involved in the SI response are not understood yet. This work concerns the study of transglutaminase (TGase), polyamines (PAs) pattern and metabolomic profiles following the pollination of Pyrus communis L. pistils with compatible and SI pollen in order to deepen their possible involvement in the reproduction of plants. Immunolocalization, abundance and activity of TGase as well as the content of free, soluble-conjugated and insoluble-bound PAs have been investigated.
1 H NMR-profiling coupled with multivariate data treatment (PCA and PLS-DA) allowed to compare, for the first time, the metabolic patterns of not-pollinated and pollinated styles. Results clearly indicate that during the SI response TGase activity increases, resulting in the accumulation of PAs conjugated to hydroxycinnamic acids and other small molecules. Metabolomic analysis showed a remarkable differences between pollinated and not-pollinated styles, where, except for glucose, all the other metabolites where less concentrated. Moreover, styles pollinated with compatible pollen showed the highest amount of sucrose than SI pollinated ones, which, in turn, contained highest amount of all the other metabolites, including aromatic compounds, such as flavonoids and a cynnamoil derivative.- Published
- 2019
- Full Text
- View/download PDF
37. Cold stress affects cell wall deposition and growth pattern in tobacco pollen tubes.
- Author
-
Parrotta L, Faleri C, Guerriero G, and Cai G
- Subjects
- Calcium metabolism, Cell Wall physiology, Cellulose metabolism, Cold-Shock Response, Fluorescent Antibody Technique, Indirect, Germination, Glucans metabolism, Hydrogen-Ion Concentration, Osmotic Pressure, Pectins metabolism, Pollen metabolism, Reactive Oxygen Species metabolism, Nicotiana metabolism, Cell Wall metabolism, Pollen Tube growth & development, Nicotiana genetics
- Abstract
Cold is an abiotic stress seriously threatening crop productivity by decreasing biomass production. The pollen tube is a target of cold stress, but also a useful model to address questions on cell wall biosynthesis. We here provide (immuno)cytological data relative to the impact of cold on the pollen tube cell wall. We clearly show that the growth pattern is severely affected by the stress, since the typical pulsed-growth mechanism accompanied by the periodic deposition of pectin rings is absent/severely reduced. Additionally, pectins and cellulose accumulate in bulges provoked by the stress, while callose, which colocalizes with pectins in the periodic rings formed during pulsed growth, accumulates randomly in the stressed samples. The altered distribution of the cell wall components is accompanied by differences in the localization of glucan synthases: cellulose synthase shows a more diffuse localization, while callose synthase shows a more frequent cytoplasmic accumulation, thereby denoting a failure in plasma membrane insertion. The cell wall observations are complemented by the analysis of intracellular Ca
2+ , pH and reactive oxygen species (ROS): while in the case of pH no major differences are observed, a less focused Ca2+ and ROS gradients are present in the stressed samples. The standard oscillatory growth of pollen tubes is recovered by transient changes of turgor pressure induced by hypoosmotic media. Overall our data contribute to the understanding of the impact that cold stress has on the normal development of the pollen tube and unveil the cell wall-related aberrant features accompanying the observed alterations., (Copyright © 2019 Elsevier B.V. All rights reserved.)- Published
- 2019
- Full Text
- View/download PDF
38. Cytoskeleton, Transglutaminase and Gametophytic Self-Incompatibility in the Malinae (Rosaceae).
- Author
-
Del Duca S, Aloisi I, Parrotta L, and Cai G
- Subjects
- Pollen Tube growth & development, Cytoskeleton metabolism, Germ Cells, Plant physiology, Rosaceae metabolism, Self-Incompatibility in Flowering Plants physiology, Transglutaminases metabolism
- Abstract
Self-incompatibility (SI) is a complex process, one out of several mechanisms that prevent plants from self-fertilizing to maintain and increase the genetic variability. This process leads to the rejection of the male gametophyte and requires the co-participation of numerous molecules. Plants have evolved two distinct SI systems, the sporophytic (SSI) and the gametophytic (GSI) systems. The two SI systems are markedly characterized by different genes and proteins and each single system can also be divided into distinct subgroups; whatever the mechanism, the purpose is the same, i.e., to prevent self-fertilization. In Malinae, a subtribe in the Rosaceae family, i.e., Pyrus communis and Malus domestica , the GSI requires the production of female determinants, known as S-RNases, which penetrate the pollen tube to interact with the male determinants. Beyond this, the penetration of S-RNase into the pollen tube triggers a series of responses involving membrane proteins, such as phospholipases, intracellular variations of cytoplasmic Ca
2+ , production of reactive oxygen species (ROS) and altered enzymatic activities, such as that of transglutaminase (TGase). TGases are widespread enzymes that catalyze the post-translational conjugation of polyamines (PAs) to different protein targets and/or the cross-linking of substrate proteins leading to the formation of cross-linked products with high molecular mass. When actin and tubulin are the substrates, this destabilizes the cytoskeleton and inhibits the pollen-tube's growth process. In this review, we will summarize the current knowledge of the relationship between S-RNase penetration, TGase activity and cytoskeleton function during GSI in the Malinae.- Published
- 2019
- Full Text
- View/download PDF
39. Depletion of sucrose induces changes in the tip growth mechanism of tobacco pollen tubes.
- Author
-
Parrotta L, Faleri C, Del Duca S, and Cai G
- Subjects
- Cell Wall metabolism, Cellulose metabolism, Glucans metabolism, Glucosyltransferases genetics, Glucosyltransferases metabolism, Glycerol metabolism, Hydrogen-Ion Concentration, Plant Proteins genetics, Plant Proteins metabolism, Pollen Tube enzymology, Pollen Tube genetics, Pollen Tube physiology, Reactive Oxygen Species metabolism, Nicotiana enzymology, Nicotiana genetics, Nicotiana physiology, Metabolic Networks and Pathways, Pollen Tube growth & development, Stress, Physiological, Sucrose metabolism, Nicotiana growth & development
- Abstract
Background and Aims: Pollen tubes are rapidly growing, photosynthetically inactive cells that need high rates of energy to support growth. Energy can derive from internal and external storage sources. The lack of carbon sources can cause various problems during pollen tube growth, which in turn could affect the reproduction of plants., Methods: We analysed the effects of energy deficiency on the development of Nicotiana tabacum pollen tubes by replacing sucrose with glycerol in the growth medium. We focused on cell growth and related processes, such as metabolite composition and cell wall synthesis., Key Results: We found that the lack of sucrose affects pollen germination and pollen tube length during a specific growth period. Both sugar metabolism and ATP concentration were affected by sucrose shortage when pollen tubes were grown in glycerol-based media; this was related to decreases in the concentrations of glucose, fructose and UDP-glucose. The intracellular pH and ROS levels also showed a different distribution in pollen tubes grown in sucrose-depleted media. Changes were also observed at the cell wall level, particularly in the content and distribution of two enzymes related to cell wall synthesis (sucrose synthase and callose synthase). Furthermore, both callose and newly secreted cell wall material (mainly pectins) showed an altered distribution corresponding to the lack of oscillatory growth in pollen tubes. Growth in glycerol-based media also temporarily affected the movement of generative cells and, in parallel, the deposition of callose plugs., Conclusion: Pollen tubes represent an ideal model system for studying metabolic pathways during the growth of plant cells. In our study, we found evidence that glycerol, a less energetic source for cell growth than sucrose, causes critical changes in cell wall deposition. The evidence that different aspects of pollen tube growth are affected is an indication that pollen tubes adapt to metabolic stress.
- Published
- 2018
- Full Text
- View/download PDF
40. Proteins immunologically related to MAP65-1 accumulate and localize differentially during bud development in Vitis vinifera L.
- Author
-
Parrotta L, Faleri C, Cresti M, and Cai G
- Subjects
- Flowers growth & development, Gene Expression, Microtubule-Associated Proteins genetics, Molecular Sequence Annotation, Plant Leaves growth & development, Plant Leaves metabolism, Plant Proteins genetics, Protein Isoforms metabolism, Protein Transport, Tubulin metabolism, Vitis growth & development, Flowers metabolism, Microtubule-Associated Proteins metabolism, Plant Proteins metabolism, Vitis metabolism
- Abstract
Various arrays of microtubules are present throughout the plant cell cycle and are involved in distinct functions. Microtubule-associated proteins (MAPs) regulate microtubule dynamics by acting as stabilizers, destabilizers, and promoters of microtubule dynamics. The MAP65 family is a specific group of cross-linkers required for structural maintenance of microtubules. In plants, different isoforms of MAP65 are differentially expressed according to their developmental program. In this work, we analyzed the differential distribution of proteins immunologically related to MAP65-1 during bud development in grapevine (Vitis vinifera L.). First, we annotated the MAP65 genes present in the Vitis genome in order to compare the number and sequence of genes to other species. Subsequently, we focused on a specific isoform (MAP65-1) by characterizing its accumulation and distribution. Proteins were extracted from different organs of Vitis (buds, leaves, flowers, and tendrils), were separated by two-dimensional electrophoresis (2-DE), and were probed by immunoblot with a specific antiserum. We found seven spots immunologically related to MAP65-1, grouped in two distinct clusters, which accumulate differentially according to the developmental stage. In addition, we analyzed the localization of MAP65-1 during three different stages of bud development. Implication of data on the use of different isotypes of MAP65-1 during Vitis development is discussed.
- Published
- 2017
- Full Text
- View/download PDF
41. The cost of surviving nitrogen excess: energy and protein demand in the lichen Cladonia portentosa as revealed by proteomic analysis.
- Author
-
Munzi S, Sheppard LJ, Leith ID, Cruz C, Branquinho C, Bini L, Gagliardi A, Cai G, and Parrotta L
- Subjects
- Ammonia metabolism, Cell Respiration physiology, Chlorophyll metabolism, Chlorophyll A, Electrophoresis, Gel, Two-Dimensional, Energy Metabolism physiology, Lichens physiology, Mass Spectrometry, Nitrates metabolism, Nitrogen physiology, Photosynthesis, Proteomics, Lichens metabolism, Nitrogen metabolism
- Abstract
Main Conclusion: Different nitrogen forms affect different metabolic pathways in lichens. In particular, the most relevant changes in protein expression were observed in the fungal partner, with NO
3 - mostly affecting the energetic metabolism and NH4 + affecting transport and regulation of proteins and the energetic metabolism much more than NO3 - did. Excess deposition of reactive nitrogen is a well-known agent of stress for lichens, but which symbiont is most affected and how, remains a mystery. Using proteomics can expand our understanding of stress effects on lichens. We investigated the effects of different doses and forms of reactive nitrogen, with and without supplementary phosphorus and potassium, on the proteome of the lichen Cladonia portentosa growing in a 'real-world' simulation of nitrogen deposition. Protein expression changed with the nitrogen treatments but mostly in the fungal partner, with NO3 - mainly affecting the energetic metabolism and NH4 + also affecting the protein synthesis machinery. The photobiont mainly responded overexpressing proteins involved in energy production. This suggests that in response to nitrogen stress, the photobiont mainly supports the defensive mechanisms initiated by the mycobiont with an increased energy production. Such surplus energy is then used by the cell to maintain functionality in the presence of NO3 - , while a futile cycle of protein production can be hypothesized to be induced by NH4 + excess. External supply of potassium and phosphorus influenced differently the responses of particular enzymes, likely reflecting the many processes in which potassium exerts a regulatory function.- Published
- 2017
- Full Text
- View/download PDF
42. The HIV-1 reverse transcriptase polymorphism A98S improves the response to tenofovir disoproxil fumarate+emtricitabine-containing HAART both in vivo and in vitro.
- Author
-
Alteri C, Surdo M, Di Maio VC, Di Santo F, Costa G, Parrotta L, Romeo I, Gori C, Santoro MM, Fedele V, Carta S, Continenza F, Pinnetti C, Bellagamba R, Liuzzi G, Orchi N, Latini A, Bertoli A, Girardi E, Alcaro S, Giuliani M, Petrosillo N, Andreoni M, Antinori A, Monforte AD, Ceccherini-Silberstein F, Artese A, Perno CF, and Svicher V
- Subjects
- Adult, Female, HIV-1 drug effects, Humans, Male, Middle Aged, Polymorphism, Genetic, Anti-HIV Agents pharmacology, Antiretroviral Therapy, Highly Active, Emtricitabine pharmacology, HIV Infections drug therapy, HIV Reverse Transcriptase genetics, Tenofovir pharmacology
- Abstract
The impact of baseline HIV-1 reverse transcriptase (RT) polymorphisms on response to first-line modern HAART containing tenofovir disoproxil fumarate (TDF) and emtricitabine (FTC) was evaluated. The impact of each RT polymorphism on virological success (VS) was evaluated in 604 HIV-1 subtype B-infected patients starting TDF+FTC-containing HAART. TDF and FTC antiviral activity was also tested in PBMCs infected by mutagenised HIV. Structural analysis based on docking simulations was performed. A98S was the only mutation significantly correlated with an increased proportion of patients achieving VS at 24 weeks (94.0% vs. 84.3%; P=0.03). Multivariate regression and Cox model analyses confirmed this result. At concentrations close to the minimal concentration achieved in patient plasma, TDF and FTC exhibited higher potency in the presence of A98S-mutated virus compared with wild-type (IC
90,TDF , 8.6±1.1 vs. 19.3±3.5nM; and IC90,FTC , 12.4±7.7 vs. 16.8±9.8nM, respectively). The efficacy of FTC, abrogated by M184V, was partially restored by A98S (IC90,FTC , 5169±5931nM for A98S+M184V vs. 18477±12478nM for M184V alone). Docking analysis showed the higher potency of TDF and FTC in the presence of A98S-mutated virus was mainly due to higher binding affinity between drugs and mutated RT compared with wild-type. In the presence of FTC, A98S also partially restored the RT binding affinity impaired by M184V alone. A98S polymorphism improves virological response to TDF+FTC-containing HAART. This may help clinicians in the choice of the optimal NRTI backbone aimed at achieving maximal virological inhibition., (Copyright © 2016 International Society for Chemotherapy of Infection and Cancer. Published by Elsevier Ltd. All rights reserved.)- Published
- 2016
- Full Text
- View/download PDF
43. Hit Identification of a Novel Dual Binder for h-telo/c-myc G-Quadruplex by a Combination of Pharmacophore Structure-Based Virtual Screening and Docking Refinement.
- Author
-
Rocca R, Costa G, Artese A, Parrotta L, Ortuso F, Maccioni E, Pinato O, Greco ML, Sissi C, Alcaro S, Distinto S, and Moraca F
- Subjects
- Humans, Drug Evaluation, Preclinical, G-Quadruplexes drug effects, Genes, myc drug effects, Molecular Docking Simulation, Promoter Regions, Genetic drug effects
- Abstract
It is well known that G-quadruplexes are targets of great interest for their roles in crucial biological processes, such as aging and cancer. Hence, a promising strategy for anticancer drug therapy is the stabilization of these structures by small molecules. We report a high-throughput in silico screening of commercial libraries from several different vendors by means of a combined structure-based pharmacophore model approach followed by docking simulations. The compounds selected by the virtual screening procedure were then tested for their ability to interact with human telomeric G-quadruplex folding by circular dichroism, fluorescence spectroscopy, and fluorescence intercalator displacement. Our approach resulted in the identification of a 13-[(dimethylamino)methyl]-12-hydroxy-8H-benzo[c]indolo[3,2,1-ij][1,5]naphthyridin-8-one derivative as a novel promising stabilizer of G-quadruplex structures within the human telomeric and the c-myc promoter sequences., (© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2016
- Full Text
- View/download PDF
44. Impact of Raw and Bioaugmented Olive-Mill Wastewater and Olive-Mill Solid Waste on the Content of Photosynthetic Molecules in Tobacco Plants.
- Author
-
Parrotta L, Campani T, Casini S, Romi M, and Cai G
- Subjects
- Bacteria isolation & purification, Bacteria metabolism, Chromatography, High Pressure Liquid, Fungi isolation & purification, Fungi metabolism, Germination, Industrial Microbiology, Pigments, Biological analysis, Polyphenols metabolism, Ribulose-Bisphosphate Carboxylase metabolism, Zea mays physiology, Olea chemistry, Photosynthesis, Solid Waste, Nicotiana physiology, Wastewater chemistry
- Abstract
Disposal and reuse of olive-mill wastes are both an economic and environmental problem, especially in countries where the cultivation of olive trees is extensive. Microorganism-based bioaugmentation can be used to reduce the pollutant capacity of wastes. In this work, bioaugmentation was used to reduce the polyphenolic content of both liquid and solid wastes. After processing, bioaugmented wastes were tested on the root development of maize seeds and on photosynthesis-related molecules of tobacco plants. In maize, we found that bioaugmentation made olive-mill wastes harmless for seed germination. In tobacco, we analyzed the content of RuBisCO (ribulose-1,5-bisphosphate carboxylase oxygenase) and of the photosynthetic pigments lutein, chlorophylls, and β-carotene. Levels of RuBisCO were negatively affected by untreated wastewater but increased if plants were treated with bioaugmented wastewater. On the contrary, levels of RuBisCO increased in the case of plants treated with raw olive-mill solid waste. Pigment levels showed dissimilar behavior because their concentration increased if plants were irrigated with raw wastewater or treated with raw olive-mill solid waste. Treatment with bioaugmented wastes restored pigment content. Findings show that untreated wastes are potentially toxic at the commencement of treatment, but plants can eventually adapt after an initial stress period. Bioaugmented wastes do not induce immediate damages, and plants rapidly recover optimal levels of photosynthetic molecules.
- Published
- 2016
- Full Text
- View/download PDF
45. New Insight into Quinoa Seed Quality under Salinity: Changes in Proteomic and Amino Acid Profiles, Phenolic Content, and Antioxidant Activity of Protein Extracts.
- Author
-
Aloisi I, Parrotta L, Ruiz KB, Landi C, Bini L, Cai G, Biondi S, and Del Duca S
- Abstract
Quinoa (Chenopodium quinoa Willd) is an ancient Andean seed-producing crop well known for its exceptional nutritional properties and resistance to adverse environmental conditions, such as salinity and drought. Seed storage proteins, amino acid composition, and bioactive compounds play a crucial role in determining the nutritional value of quinoa. Seeds harvested from three Chilean landraces of quinoa, one belonging to the salares ecotype (R49) and two to the coastal-lowlands ecotype, VI-1 and Villarrica (VR), exposed to two levels of salinity (100 and 300 mM NaCl) were used to conduct a sequential extraction of storage proteins in order to obtain fractions enriched in albumins/globulins, 11S globulin and in prolamin-like proteins. The composition of the resulting protein fractions was analyzed by one- and two-dimensional polyacrylamide gel electrophoresis. Results confirmed a high polymorphism in seed storage proteins; the two most representative genotype-specific bands of the albumin/globulin fraction were the 30- and 32-kDa bands, while the 11S globulin showed genotype-specific polymorphism for the 40- and 42-kDa bands. Spot analysis by mass spectrometry followed by in silico analyses were conducted to identify the proteins whose expression changed most significantly in response to salinity in VR. Proteins belonging to several functional categories (i.e., stress protein, metabolism, and storage) were affected by salinity. Other nutritional and functional properties, namely amino acid profiles, total polyphenol (TPC) and flavonoid (TFC) contents, and antioxidant activity (AA) of protein extracts were also analyzed. With the exception of Ala and Met in R49, all amino acids derived from protein hydrolysis were diminished in seeds from salt-treated plants, especially in landrace VI-1. By contrast, several free amino acids were unchanged or increased by salinity in R49 as compared with VR and VI-1, suggesting a greater tolerance in the salares landrace. VR had the highest TPC and AA under non-saline conditions. Salinity increased TPC in all three landraces, with the strongest increase occurring in R49, and enhanced radical scavenging capacity in R49 and VR. Overall, results show that salinity deeply altered the seed proteome and amino acid profiles and, in general, increased the concentration of bioactive molecules and AA of protein extracts in a genotype-dependent manner.
- Published
- 2016
- Full Text
- View/download PDF
46. Heat stress affects the cytoskeleton and the delivery of sucrose synthase in tobacco pollen tubes.
- Author
-
Parrotta L, Faleri C, Cresti M, and Cai G
- Subjects
- Actin Cytoskeleton metabolism, Actins metabolism, Cell Wall metabolism, Electrophoresis, Gel, Two-Dimensional, Green Fluorescent Proteins, Hot Temperature, Kymography, Microtubules metabolism, Plant Proteins metabolism, Pollen Tube enzymology, Pollen Tube ultrastructure, Protein Transport, Stress, Physiological, Nicotiana enzymology, Nicotiana ultrastructure, Cytoskeleton metabolism, Glucosyltransferases metabolism, Pollen Tube physiology, Nicotiana physiology
- Abstract
Main Conclusion: Heat stress changes isoform content and distribution of cytoskeletal subunits in pollen tubes affecting accumulation of secretory vesicles and distribution of sucrose synthase, an enzyme involved in cell wall synthesis. Plants are sessile organisms and are therefore exposed to damages caused by the predictable increase in temperature. We have analyzed the effects of temperatures on the development of pollen tubes by focusing on the cytoskeleton and related processes, such as vesicular transport and cell wall synthesis. First, we show that heat stress affects pollen germination and, to a lesser extent, pollen tube growth. Both, microtubules and actin filaments, are damaged by heat treatment and changes of actin and tubulin isoforms were observed in both cases. Damages to actin filaments mainly concern the actin array present in the subapex, a region critical for determining organelle and vesicle content in the pollen tube apex. In support of this, green fluorescent protein-labeled vesicles are arranged differently between heat-stressed and control samples. In addition, newly secreted cell wall material (labeled by propidium iodide) shows an altered distribution. Damage induced by heat stress also extends to proteins that bind actin and participate in cell wall synthesis, such as sucrose synthase. Ultimately, heat stress affects the cytoskeleton thereby causing alterations in the process of vesicular transport and cell wall deposition.
- Published
- 2016
- Full Text
- View/download PDF
47. Incomplete APOBEC3G/F Neutralization by HIV-1 Vif Mutants Facilitates the Genetic Evolution from CCR5 to CXCR4 Usage.
- Author
-
Alteri C, Surdo M, Bellocchi MC, Saccomandi P, Continenza F, Armenia D, Parrotta L, Carioti L, Costa G, Fourati S, Di Santo F, Scutari R, Barbaliscia S, Fedele V, Carta S, Balestra E, Alcaro S, Marcelin AG, Calvez V, Ceccherini-Silberstein F, Artese A, Perno CF, and Svicher V
- Subjects
- APOBEC Deaminases, Amino Acid Sequence, Amino Acid Substitution genetics, Base Sequence, Cell Line, Cytidine Deaminase, Evolution, Molecular, HEK293 Cells, HIV Infections virology, Humans, Leukocytes, Mononuclear virology, Cytosine Deaminase genetics, HIV Infections genetics, HIV-1 genetics, Mutation genetics, Receptors, CCR5 genetics, Receptors, CXCR4 genetics
- Abstract
Incomplete APOBEC3G/F neutralization by a defective HIV-1Vif protein can promote genetic diversification by inducing G-to-A mutations in the HIV-1 genome. The HIV-1 Env V3 loop, critical for coreceptor usage, contains several putative APOBEC3G/F target sites. Here, we determined if APOBEC3G/F, in the presence of Vif-defective HIV-1 virus, can induce G-to-A mutations at V3 positions critical to modulation of CXCR4 usage. Peripheral blood mononuclear cells (PBMC) and monocyte-derived macrophages (MDM) from 2 HIV-1-negative donors were infected with CCR5-using 81.A-VifWT virus (i.e., with wild-type [WT] Vif protein), 81.A-VifE45G, or 81.A-VifK22E (known to incompletely/partially neutralize APOBEC3G/F). The rate of G-toA mutations was zero or extremely low in 81.A-VifWT- and 81.A-VifE45G-infected PBMC from both donors. Conversely, G-to-A enrichment was detected in 81.A-VifK22E-infected PBMC (prevalence ranging from 2.18% at 7 days postinfection [dpi] to 3.07% at 21 dpi in donor 1 and from 10.49% at 7 dpi to 8.69% at 21 dpi in donor 2). A similar scenario was found in MDM. G-to-A mutations occurred at 8 V3 positions, resulting in nonsynonymous amino acid substitutions. Of them, G24E and E25K strongly correlated with phenotypically/genotypically defined CXCR4-using viruses (P = 0.04 and 5.5e-7, respectively) and increased the CXCR4 N-terminal binding affinity for V3 (WT, -40.1 kcal/mol; G24E, -510 kcal/mol; E25K, -522 kcal/mol). The analysis of paired V3 and Vif DNA sequences from 84 HIV-1-infected patients showed that the presence of a Vif-defective virus correlated with CXCR4 usage in proviral DNA (P = 0.04). In conclusion, incomplete APOBEC3G/F neutralization by a single Vif amino acid substitution seeds a CXCR4-using proviral reservoir. This can have implications for the success of CCR5 antagonist-based therapy, as well as for the risk of disease progression., (Copyright © 2015, American Society for Microbiology. All Rights Reserved.)
- Published
- 2015
- Full Text
- View/download PDF
48. Macrocyclic naphthalene diimides as G-quadruplex binders.
- Author
-
Marchetti C, Minarini A, Tumiatti V, Moraca F, Parrotta L, Alcaro S, Rigo R, Sissi C, Gunaratnam M, Ohnmacht SA, Neidle S, and Milelli A
- Subjects
- Antineoplastic Agents pharmacology, Binding Sites, Cell Line, Tumor, Cell Survival drug effects, DNA, Neoplasm chemistry, Drug Design, Humans, Imides pharmacology, Molecular Docking Simulation, Molecular Dynamics Simulation, Naphthalenes pharmacology, Spermidine chemistry, Spermine chemistry, Static Electricity, Structure-Activity Relationship, Antineoplastic Agents chemical synthesis, DNA, Neoplasm antagonists & inhibitors, G-Quadruplexes, Imides chemical synthesis, Naphthalenes chemical synthesis
- Abstract
The synthesis, biological and molecular modeling evaluation of a series of macrocyclic naphthalene diimides is reported. The present investigation expands on the study of structure-activity relationships of prototype compound 2 by constraining the molecule into a macrocyclic structure with the aim of improving its G-quadruplex binding activity and selectivity. The new derivatives, compounds 4-7 carry spermidine- and spermine-like linkers while in compound 8 the inner basic nitrogen atoms of spermine have been replaced with oxygen atoms. The design strategy has led to potent compounds stabilizing both human telomeric (F21T) and c-KIT2 quadruplex sequences, and high selectivity for quadruplex in comparison to duplex DNA. Antiproliferative effects of the new derivatives 4-8 have been evaluated in a panel of cancer cell lines and all the tested compounds showed activity in the low micromolar or sub-micromolar range of concentrations. In order to rationalize the molecular basis of the DNA G-quadruplex versus duplex recognition preference, docking and molecular dynamics studies have been performed. The computational results support the observation that the main driving force in the recognition is due to electrostatic factors., (Copyright © 2015 Elsevier Ltd. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
49. Target or barrier? The cell wall of early- and later-diverging plants vs cadmium toxicity: differences in the response mechanisms.
- Author
-
Parrotta L, Guerriero G, Sergeant K, Cai G, and Hausman JF
- Abstract
Increasing industrialization and urbanization result in emission of pollutants in the environment including toxic heavy metals, as cadmium and lead. Among the different heavy metals contaminating the environment, cadmium raises great concern, as it is ecotoxic and as such can heavily impact ecosystems. The cell wall is the first structure of plant cells to come in contact with heavy metals. Its composition, characterized by proteins, polysaccharides and in some instances lignin and other phenolic compounds, confers the ability to bind non-covalently and/or covalently heavy metals via functional groups. A strong body of evidence in the literature has shown the role of the cell wall in heavy metal response: it sequesters heavy metals, but at the same time its synthesis and composition can be severely affected. The present review analyzes the dual property of plant cell walls, i.e., barrier and target of heavy metals, by taking Cd toxicity as example. Following a summary of the known physiological and biochemical responses of plants to Cd, the review compares the wall-related mechanisms in early- and later-diverging land plants, by considering the diversity in cell wall composition. By doing so, common as well as unique response mechanisms to metal/cadmium toxicity are identified among plant phyla and discussed. After discussing the role of hyperaccumulators' cell walls as a particular case, the review concludes by considering important aspects for plant engineering.
- Published
- 2015
- Full Text
- View/download PDF
50. Organelle trafficking, the cytoskeleton, and pollen tube growth.
- Author
-
Cai G, Parrotta L, and Cresti M
- Subjects
- Actins metabolism, Movement, Myosins metabolism, Pollen Tube metabolism, Cytoskeleton metabolism, Organelles metabolism, Pollen Tube growth & development
- Abstract
The pollen tube is fundamental for the reproduction of seed plants. Characteristically, it grows relatively quickly and uni-directionally ("polarized growth") to extend the male gametophyte to reach the female gametophyte. The pollen tube forms a channel through which the sperm cells move so that they can reach their targets in the ovule. To grow quickly and directionally, the pollen tube requires an intense movement of organelles and vesicles that allows the cell's contents to be distributed to sustain the growth rate. While the various organelles distribute more or less uniformly within the pollen tube, Golgi-released secretory vesicles accumulate massively at the pollen tube apex, that is, the growing region. This intense movement of organelles and vesicles is dependent on the dynamics of the cytoskeleton, which reorganizes differentially in response to external signals and coordinates membrane trafficking with the growth rate of pollen tubes., (© 2014 Institute of Botany, Chinese Academy of Sciences.)
- Published
- 2015
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.