193 results on '"Peng, Zhenling"'
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2. trRosettaRNA: automated prediction of RNA 3D structure with transformer network
3. Responses of arbuscular mycorrhizal fungi to straw return and nitrogen fertilizer reduction in a rainfed maize field
4. Key decomposers of straw depending on tillage and fertilization
5. Single-sequence protein structure prediction using supervised transformer protein language models
6. Grazing exclusion had greater effects than nitrogen addition on soil and plant community in a desert steppe, Northwest of China
7. The trRosetta server for fast and accurate protein structure prediction
8. RNA threading with secondary structure and sequence profile
9. Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
10. Abiotic Conditions Drive Denitrification While Abundances and Resource-Driven Ecological Clusters Control Nitrification in Cropland Soils
11. Improved protein structure prediction using predicted interresidue orientations
12. Mycorrhizal effects on crop yield and soil ecosystem functions in a long‐term tillage and fertilization experiment.
13. Codon selection reduces GC content bias in nucleic acids encoding for intrinsically disordered proteins
14. Interplay Between the Oxidoreductase PDIA6 and microRNA-322 Controls the Response to Disrupted Endoplasmic Reticulum Calcium Homeostasis
15. Improved protein structure prediction with trRosettaX2, AlphaFold2, and optimized MSAs in CASP15
16. Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
17. Disordered RNA-Binding Region Prediction with DisoRDPbind
18. Endoplasmic reticulum and the microRNA environment in the cardiovascular system
19. Responses of arbuscular mycorrhizal fungi to straw return and nitrogen fertilizer reduction in a rainfed maize field
20. A unified approach to protein domain parsing with inter-residue distance matrix
21. CLIP: accurate prediction of disordered linear interacting peptides from protein sequences using co-evolutionary information
22. Accuratede novoprediction of RNA 3D structure with transformer network
23. Prediction of Disordered RNA, DNA, and Protein Binding Regions Using DisoRDPbind
24. APOD: accurate sequence-based predictor of disordered flexible linkers
25. Additional file 1 of Grazing exclusion had greater effects than nitrogen addition on soil and plant community in a desert steppe, Northwest of China
26. CLIP: accurate prediction of disordered linear interacting peptides from protein sequences using co-evolutionary information.
27. Exceptionally abundant exceptions: comprehensive characterization of intrinsic disorder in all domains of life
28. Single-sequence protein structure prediction using supervised transformer protein language models
29. Toward the assessment of predicted inter-residue distance
30. Improved Protein Structure Prediction Using a New Multi‐Scale Network and Homologous Templates
31. Accurate Sequence-Based Prediction of Deleterious nsSNPs with Multiple Sequence Profiles and Putative Binding Residues
32. Improved estimation of model quality using predicted inter-residue distance
33. A creature with a hundred waggly tails: intrinsically disordered proteins in the ribosome
34. Critical assessment of protein intrinsic disorder prediction
35. Recognition of small molecule–RNA binding sites using RNA sequence and structure
36. RNA inter-nucleotide 3D closeness prediction by deep residual neural networks
37. Toward the assessment of predicted inter-residue distance.
38. On Monomeric and Multimeric Structures-Based Protein-Ligand Interactions.
39. On monomeric and multimeric structures-based protein-ligand interactions
40. CATHER: a novel threading algorithm with predicted contacts
41. Improved protein structure prediction using predicted inter-residue orientations
42. RNA inter-nucleotide 3D closeness prediction by deep residual neural networks.
43. Protein contact prediction using metagenome sequence data and residual neural networks
44. Codon selection reduces GC content bias in nucleic acids encoding for intrinsically disordered proteins
45. Effect of arbuscular mycorrhizal fungi on soil enzyme activity is coupled with increased plant biomass
46. Computational Prediction of MoRFs, Short Disorder-to-order Transitioning Protein Binding Regions
47. Enhanced prediction of RNA solvent accessibility with long short-term memory neural networks and improved sequence profiles
48. CATHER: a novel threading algorithm with predicted contacts.
49. Protein contact prediction using metagenome sequence data and residual neural networks.
50. Effect of arbuscular mycorrhizal fungi on soil enzyme activity is coupled with increased plant biomass.
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