277 results on '"Petr Sedlacek"'
Search Results
2. Nanometals incorporation into active and biodegradable chitosan films
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Simona Dordevic, Dani Dordevic, Karolina Tesikova, Petr Sedlacek, Michal Kalina, Lukas Vapenka, Marcela Nejezchlebova, Jakub Treml, Bohuslava Tremlova, and Hana Koudelková Mikulášková
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Packaging ,Nanoparticles ,Chemical and physical characterization ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
This study investigates the effects of incorporating ZnO, TiO2, and colloidal Ag nanoparticles on the antioxidant, antimicrobial, and physical properties of biodegradable chitosan films. The research focuses on addressing the growing demand for sustainable packaging solutions that offer efficient food preservation while mitigating environmental concerns. In this investigation, the physical properties including thickness, water content, solubility, swelling degree, tensile strength, and elasticity of the chitosan films were examined. Additionally, the samples were analyzed for total polyphenol content, antimicrobial activity, and antioxidant capacity. Notably, the incorporation of ZnO nanoparticles led to the lowest water content and highest strength values among the tested films. Conversely, the addition of colloidal Ag nanoparticles resulted in films with the highest antioxidant capacities (DPPH: 32.202 ± 1.631 %). Remarkably, antimicrobial tests revealed enhanced activity with the inclusion of colloidal silver nanoparticles, yet the most potent antimicrobial properties were observed in films containing ZnO (E.coli: 2.0 ± 0.0 mm; MRSA: 2.0 ± 0.5 mm). The findings of this study hold significant implications for the advancement of edible biodegradable films, offering potential for more efficient food packaging solutions that address environmental sustainability concerns. By elucidating the effects of nanoparticle incorporation on film properties, this research contributes to the ongoing discourse surrounding sustainable packaging solutions in the food industry.
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- 2024
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3. Matched unrelated donor transplantation versus haploidentical transplantation with post-transplant cyclophosphamide in children with acute myeloid leukemia: a PDWP-EBMT study
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Annalisa Ruggeri, Nicole Santoro, Jacques-Emmanuel Galimard, Krzysztof Kalwak, Mattia Algeri, Ludmila Zubarovskaya, Krzysztof Czyzewski, Elena Skorobogatova, Petr Sedlacek, Caroline Besley, Adriana Balduzzi, Yves Bertrand, Julia Peristeri, Franca Fagioli, Mariane Ifversen, Jolanta Gozdzik, Christina Peters, Birgitta Versluijs, Alessandra Biffi, Arcangelo Prete, Maura Faraci, Ibrahim Ghemlas, Ivana Bodova, Olga Aleinikova, Arnaud Dalissier, Vanderson Rocha, and Selim Corbacioglu
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
In children with acute myeloid leukemia (AML) who lack an HLA identical sibling, the donor can be replaced with an HLA matched unrelated donor (MUD) or a haploidentical donor (haplo). We compared outcomes of patients
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- 2024
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4. P754: PRIME EDITING AS A NOVEL TOOL FOR PRECISE CORRECTION OF CAUSAL MUTATIONS IN FANCONI ANAEMIA GROUP A PATIENT-DERIVED CELLS
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Lucie Peterkova, Markéta Racková, Michael Svaton, Petr Riha, Drahuse Novotna, Petr Sedlacek, Lucie Sramkova, and Karolina Skvarova
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Published
- 2023
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5. High-Pressure Depolymerization of Poly(lactic acid) (PLA) and Poly(3-hydroxybutyrate) (PHB) Using Bio-Based Solvents: A Way to Produce Alkyl Esters Which Can Be Modified to Polymerizable Monomers
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Vojtěch Jašek, Jan Fučík, Lucia Ivanová, Dominik Veselý, Silvestr Figalla, Ludmila Mravcova, Petr Sedlacek, Jozef Krajčovič, and Radek Přikryl
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poly(lactic acid) ,poly(3-hydroxybutyrate) ,depolymerization ,alcoholysis ,methacrylation ,polymerizable monomers ,Organic chemistry ,QD241-441 - Abstract
The polyesters poly(lactic acid) (PLA) and poly(3-hydroxybutyrate) (PHB) used in various applications such as food packaging or 3D printing were depolymerized by biobased aliphatic alcohols—methanol and ethanol with the presence of para-toluenesulphonic acid (p-TSA) as a catalyst at a temperature of 151 °C. It was found that the fastest depolymerization is reached using methanol as anucleophile for the reaction with PLA, resulting in the value of reaction rate constant (k) of 0.0425 min−1 and the yield of methyl lactate of 93.8% after 120 min. On the other hand, the value of constant k for the depolymerization of PHB in the presence of ethanol reached 0.0064 min−1 and the yield of ethyl 3-hydroxybutyrate was of 76.0% after 240 min. A kinetics study of depolymerization was performed via LC–MS analysis of alkyl esters of lactic acid and 3-hydroxybutanoic acid. The structure confirmation of the products was performed via FT-IR, MS, 1H NMR, and 13C NMR. Synthesized alkyl lactates and 3-hydroxybutyrates were modified into polymerizable molecules using methacrylic anhydride as a reactant and potassium 2-ethylhexanoate as a catalyst at a temperature of 80 °C. All alkyl esters were methacrylated for 24 h, guaranteeing the quantitative yield (which in all cases reached values equal to or of more than 98%). The methacrylation rate constants (k′) were calculated to compare the reaction kinetics of each alkyl ester. It was found that lactates reach afaster rate of reaction than 3-hydroxybutyrates. The value of k′ for themethacrylated methyl lactate reached 0.0885 dm3/(mol·min). Opposite to this result, methacrylated ethyl 3-hydroxybutyrate’s constant k′ was 0.0075 dm3/(mol·min). The reaction rate study was conducted by the GC-FID method and the structures were confirmed via FT-IR, MS, 1H NMR, and 13C NMR.
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- 2022
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6. Supportive Care During Pediatric Hematopoietic Stem Cell Transplantation: Prevention of Infections. A Report From Workshops on Supportive Care of the Paediatric Diseases Working Party (PDWP) of the European Society for Blood and Marrow Transplantation (EBMT)
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Marianne Ifversen, Roland Meisel, Petr Sedlacek, Krzysztof Kalwak, Luisa Sisinni, Daphna Hutt, Thomas Lehrnbecher, Adriana Balduzzi, Tamara Diesch, Andrea Jarisch, Tayfun Güngör, Jerry Stein, Isaac Yaniv, Halvard Bonig, Michaela Kuhlen, Marc Ansari, Tiago Nava, Jean-Hugues Dalle, Cristina Diaz-de-Heredia, Eugenia Trigoso, Ulrike Falkenberg, Mihaela Hartmann, Marco Deiana, Marta Canesi, Chiara Broggi, Alice Bertaina, Brenda Gibson, Gergely Krivan, Kim Vettenranta, Toni Matic, Jochen Buechner, Anita Lawitschka, Christina Peters, Akif Yesilipek, Koray Yalçin, Giovanna Lucchini, Shahrzad Bakhtiar, Dominik Turkiewicz, Riitta Niinimäki, Jacek Wachowiak, Simone Cesaro, Arnaud Dalissier, Selim Corbacioglu, Andre Manfred Willasch, and Peter Bader
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infection precaution ,allogeneic hematological stem cell transplantation ,children ,antibiotic prophylactic therapy ,vaccination ,Pediatrics ,RJ1-570 - Abstract
Specific protocols define eligibility, conditioning, donor selection, graft composition and prophylaxis of graft vs. host disease for children and young adults undergoing hematopoietic stem cell transplant (HSCT). However, international protocols rarely, if ever, detail supportive care, including pharmaceutical infection prophylaxis, physical protection with face masks and cohort isolation or food restrictions. Supportive care suffers from a lack of scientific evidence and implementation of practices in the transplant centers brings extensive restrictions to the child's and family's daily life after HSCT. Therefore, the Board of the Pediatric Diseases Working Party (PDWP) of the European Society for Blood and Marrow Transplantation (EBMT) held a series of dedicated workshops since 2017 with the aim of initiating the production of a set of minimal recommendations. The present paper describes the consensus reached within the field of infection prophylaxis.
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- 2021
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7. A simple technique for assessing the cuticular diffusion of humic acid biostimulants
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Marcela Smilkova, Jiri Smilek, Michal Kalina, Martina Klucakova, Miloslav Pekar, and Petr Sedlacek
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Diffusion ,Hydrogel ,Prunus laurocerasus ,Liquid fertilization ,Humic substances ,Plant cuticle ,Plant culture ,SB1-1110 ,Biology (General) ,QH301-705.5 - Abstract
Abstract Background Experimental determination of the extent and rate of transport of liquid humates supplied to plants is critical in testing physiological effects of such biostimulants which are often supplied as foliar sprays. Therefore, an original experimental method for the qualitative investigation and quantitative description of the penetration of humates through plant cuticles is proposed, tested, and evaluated. Results The proposed method involves the isolation of model plant leaf cuticles and the subsequent in vitro evaluation of cuticular humate transport. The employed novel methodology is based on a simple diffusion couple arrangement involving continuous spectrophotometric determination of the amount of penetrated humate in a hydrogel diffusion medium. Prunus laurocerasus leaf cuticles were isolated by chemical and enzymatic treatment and the rate of cuticular penetration of a commercial humate (lignohumate) was estimated over time in quantitative and qualitative terms. Different rates of lignohumate transport were determined for abaxial and adaxial leaf cuticles also in relation to the different cuticular extraction methods tested. Conclusions The proposed methodology represents a simple and cheap experimental tool for the study on the trans-cuticular penetration of humic-based biostimulants.
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- 2019
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8. Degradation of P(3HB-co-4HB) Films in Simulated Body Fluids
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Juraj Vodicka, Monika Wikarska, Monika Trudicova, Zuzana Juglova, Aneta Pospisilova, Michal Kalina, Eva Slaninova, Stanislav Obruca, and Petr Sedlacek
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polyhydroxyalkanoates (PHA) ,Aneurinibacillus sp. H1 ,PHA copolymers ,biodegradation ,simulated body fluids ,Organic chemistry ,QD241-441 - Abstract
A novel model of biodegradable PHA copolymer films preparation was applied to evaluate the biodegradability of various PHA copolymers and to discuss its biomedical applicability. In this study, we illustrate the potential biomaterial degradation rate affectability by manipulation of monomer composition via controlling the biosynthetic strategies. Within the experimental investigation, we have prepared two different copolymers of 3-hydroxybutyrate and 4-hydroxybutyrate—P(3HB-co-36 mol.% 4HB) and P(3HB-co-66 mol.% 4HB), by cultivating the thermophilic bacterial strain Aneurinibacillus sp. H1 and further investigated its degradability in simulated body fluids (SBFs). Both copolymers revealed faster weight reduction in synthetic gastric juice (SGJ) and artificial colonic fluid (ACF) than simple homopolymer P3HB. In addition, degradation mechanisms differed across tested polymers, according to SEM micrographs. While incubated in SGJ, samples were fragmented due to fast hydrolysis sourcing from substantially low pH, which suggest abiotic degradation as the major degradation mechanism. On the contrary, ACF incubation indicated obvious enzymatic hydrolysis. Further, no cytotoxicity of the waste fluids was observed on CaCO-2 cell line. Based on these results in combination with high production flexibility, we suggest P(3HB-co-4HB) copolymers produced by Aneurinibacillus sp. H1 as being very auspicious polymers for intestinal in vivo treatments.
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- 2022
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9. Effects of Differing Monomer Compositions on Properties of P(3HB-co-4HB) Synthesized by Aneurinibacillus sp. H1 for Various Applications
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Aneta Pospisilova, Juraj Vodicka, Monika Trudicova, Zuzana Juglova, Jiri Smilek, Premysl Mencik, Jiri Masilko, Eva Slaninova, Veronika Melcova, Michal Kalina, Stanislav Obruca, and Petr Sedlacek
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polyhydroxyalkanoates (PHA) ,P(3HB-co-4HB) ,Aneurinibacillus sp. H1 ,mechanical properties ,surface morphology ,crystallinity ,Organic chemistry ,QD241-441 - Abstract
Films prepared from poly(3-hydroxybutyrate-co-4-hydroxybutyrate) copolymers produced by Aneurinibacillus sp. H1 using an automatic film applicator were homogeneous and had a defined thickness, which allowed a detailed study of physicochemical properties. Their properties were compared with those of a poly (3-hydroxybutyrate) homopolymer film prepared by the same procedure, which proved to be significantly more crystalline by DSC and XRD. Structural differences between samples had a major impact on their properties. With increasing 4-hydroxybutyrate content, the ductility and release rate of the model hydrophilic active ingredient increased significantly. Other observed properties, such as the release of the hydrophobic active substance, the contact angle with water and ethylene glycol, or the surface morphology and roughness, were also affected by the composition. The identified properties predetermine these copolymers for wide use in areas such as biomedicine or smart biodegradable packaging for food or cosmetics. The big advantage is the possibility of fine-tuning properties simply by changing the fermentation conditions.
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- 2022
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10. Combination of Hypotonic Lysis and Application of Detergent for Isolation of Polyhydroxyalkanoates from Extremophiles
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Ivana Novackova, Xenie Kourilova, Katerina Mrazova, Petr Sedlacek, Michal Kalina, Vladislav Krzyzanek, Martin Koller, and Stanislav Obruca
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polyhydroxyalkanoate (PHA) ,sodium dodecyl sulfate (SDS) ,PHA isolation ,extremophiles ,halophiles ,thermophiles ,Organic chemistry ,QD241-441 - Abstract
Production of polyhydroxyalkanoates (PHA), microbial biopolyesters, employing extremophilic microorganisms is a very promising concept relying on robustness of such organisms against microbial contamination, which provides numerous economic and technological benefits. In this work, we took advantage of the natural susceptibility of halophilic and thermophilic PHA producers to hypotonic lysis and we developed a simple and robust approach enabling effective isolation of PHA materials from microbial cells. The method is based on the exposition of microbial cells to hypotonic conditions induced by the diluted solution of sodium dodecyl sulfate (SDS) at elevated temperatures. Such conditions lead to disruption of the cells and release of PHA granules. Moreover, SDS, apart from its cell-disruptive function, also solubilizes hydrophobic components, which would otherwise contaminate PHA materials. The purity of obtained materials, as well as the yields of recovery, reach high values (values of purity higher than 99 wt.%, yields close to 1). Furthermore, we also focused on the removal of SDS from wastewater. The simple, inexpensive, and safe technique is based on the precipitation of SDS in the presence of KCl. The precipitate can be simply removed by decantation or centrifugation. Moreover, there is also the possibility to regenerate the SDS, which would substantially improve the economic feasibility of the process.
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- 2022
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11. Allogeneic hematopoietic stem cell transplantation for severe, refractory juvenile idiopathic arthritis
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Juliana M. F. Silva, Fani Ladomenou, Ben Carpenter, Sharat Chandra, Petr Sedlacek, Renata Formankova, Vicky Grandage, Mark Friswell, Andrew J. Cant, Zohreh Nademi, Mary A. Slatter, Andrew R. Gennery, Sophie Hambleton, Terence J. Flood, Giovanna Lucchini, Robert Chiesa, Kanchan Rao, Persis J. Amrolia, Paul Brogan, Lucy R. Wedderburn, Julie M. Glanville, Rachael Hough, Rebecca Marsh, Mario Abinun, and Paul Veys
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Specialties of internal medicine ,RC581-951 - Abstract
Abstract: Patients with juvenile idiopathic arthritis (JIA) can experience a severe disease course, with progressive destructive polyarthritis refractory to conventional therapy with disease-modifying antirheumatic drugs including biologics, as well as life-threatening complications including macrophage activation syndrome (MAS). Allogeneic hematopoietic stem cell transplantation (allo-HSCT) is a potentially curative immunomodulatory strategy for patients with such refractory disease. We treated 16 patients in 5 transplant centers between 2007 and 2016: 11 children with systemic JIA and 5 with rheumatoid factor–negative polyarticular JIA; all were either refractory to standard therapy, had developed secondary hemophagocytic lymphohistiocytosis/MAS poorly responsive to treatment, or had failed autologous HSCT. All children received reduced toxicity fludarabine-based conditioning regimens and serotherapy with alemtuzumab. Fourteen of 16 patients are alive with a median follow-up of 29 months (range, 2.8-96 months). All patients had hematological recovery. Three patients had grade II-IV acute graft-versus-host disease. The incidence of viral infections after HSCT was high, likely due to the use of alemtuzumab in already heavily immunosuppressed patients. All patients had significant improvement of arthritis, resolution of MAS, and improved quality of life early following allo-HSCT; most importantly, 11 children achieved complete drug-free remission at the last follow-up. Allo-HSCT using alemtuzumab and reduced toxicity conditioning is a promising therapeutic option for patients with JIA refractory to conventional therapy and/or complicated by MAS. Long-term follow-up is required to ascertain whether disease control following HSCT continues indefinitely.
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- 2018
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12. Incorporation of Natural Blueberry, Red Grapes and Parsley Extract By-Products into the Production of Chitosan Edible Films
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Simona Dordevic, Dani Dordevic, Petr Sedlacek, Michal Kalina, Karolina Tesikova, Bojan Antonic, Bohuslava Tremlova, Jakub Treml, Marcela Nejezchlebova, Lukas Vapenka, Ales Rajchl, and Monika Bulakova
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antioxidant activity ,FTIR ,barrier properties ,antimicrobial properties ,Organic chemistry ,QD241-441 - Abstract
The aim of the research was to produce edible packaging based on chitosan with the addition of various concentrations of extracts of blueberry, red grape and parsley marcs. Packaging was made from extrudate extracts, which were subsequently analyzed by physicochemical methods: zeta-potential, gas barrier properties, thickness, water content, solubility, swelling degree, textural properties, total polyphenol content (TPC), polyphenols by high pressure liquid chromatography (HPLC), antioxidant activity, attenuated total reflectance Fourier-Transform spectroscopy (FTIR), antimicrobial activity and determination of migration of bioactive substances. The results indicate that a higher content of plant extracts have a statistically significant (p < 0.05) influence on properties of experimentally produced edible films. Edible films produced with the highest concentrations of red grapes marc extracts showed the most advantageous properties since antimicrobial activity against E. coli were the highest in this kind of produced film. The physical properties of edible films were also improved by the addition of extracts; gas permeability toward oxygen can be defined as advantageous, as can swelling degree, which decreased with higher concentrations of extracts. The research emphasized the possibility to use plant foodstuffs by-products in the production of edible/biodegradable films, helping in the overall sustainability and eco-friendliness of food/package production.
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- 2021
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13. Novel SAMD9 Mutation in a Patient With Immunodeficiency, Neutropenia, Impaired Anti-CMV Response, and Severe Gastrointestinal Involvement
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Renata Formankova, Veronika Kanderova, Marketa Rackova, Michael Svaton, Tomas Brdicka, Petr Riha, Petra Keslova, Ester Mejstrikova, Marketa Zaliova, Tomas Freiberger, Hana Grombirikova, Zuzana Zemanova, Marcela Vlkova, Filip Fencl, Ivana Copova, Jiri Bronsky, Petr Jabandziev, Petr Sedlacek, Jana Soukalova, Ondrej Zapletal, Jan Stary, Jan Trka, Tomas Kalina, Karolina Skvarova Kramarzova, Eva Hlavackova, Jiri Litzman, and Eva Fronkova
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SAMD9 ,MIRAGE ,immunodeficiency ,neutropenia ,cytomegalovirus infection ,dysphagia ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Mutations in the Sterile alpha motif domain containing 9 (SAMD9) gene have been described in patients with severe multisystem disorder, MIRAGE syndrome, but also in patients with bone marrow (BM) failure in the absence of other systemic symptoms. The role of hematopoietic stem cell transplantation (HSCT) in the management of the disease is still unclear. Here, we present a patient with a novel mutation in SAMD9 (c.2471 G>A, p.R824Q), manifesting with prominent gastrointestinal tract involvement and immunodeficiency, but without any sign of adrenal insufficiency typical for MIRAGE syndrome. He suffered from severe CMV (cytomegalovirus) infection at 3 months of age, with a delayed development of T lymphocyte functional response against CMV, profound T cell activation, significantly reduced B lymphocyte counts and impaired lymphocyte proliferative response. Cultured T cells displayed slightly lower calcium flux and decreased survival. At the age of 6 months, he developed severe neutropenia requiring G-CSF administration, and despite only mild morphological and immunophenotypical disturbances in the BM, 78% of the BM cells showed monosomy 7 at the age of 18 months. Surprisingly, T cell proliferation after CD3 stimulation and apoptosis of the cells normalized during the follow-up, possibly reflecting the gradual development of monosomy 7. Among other prominent symptoms, he had difficulty swallowing, requiring percutaneous endoscopic gastrostomy (PEG), frequent gastrointestinal infections, and perianal erosions. He suffered from repeated infections and periodic recurring fevers with the elevation of inflammatory markers. At 26 months of age, he underwent HSCT that significantly improved hematological and immunological laboratory parameters. Nevertheless, he continued to suffer from other conditions, and subsequently, he died at day 440 post-transplant due to sepsis. Pathogenicity of this novel SAMD9 mutation was confirmed experimentally. Expression of mutant SAMD9 caused a significant decrease in proliferation and increase in cell death of the transfected cells.Conclusion: We describe a novel SAMD9 mutation in a patient with prominent gastrointestinal and immunological symptoms but without adrenal hypoplasia. Thus, SAMD9 mutations should be considered as cause of enteropathy in pediatric patients. The insufficient therapeutic outcome of transplantation further questions the role of HSCT in the management of patients with SAMD9 mutations and multisystem involvement.
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- 2019
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14. Multiscale Experimental Evaluation of Agarose-Based Semi-Interpenetrating Polymer Network Hydrogels as Materials with Tunable Rheological and Transport Performance
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Monika Trudicova, Jiri Smilek, Michal Kalina, Marcela Smilkova, Katerina Adamkova, Kamila Hrubanova, Vladislav Krzyzanek, and Petr Sedlacek
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hydrogels ,semi-interpenetrating polymer networks ,controlled release systems ,rheology ,diffusion ,cryo-scanning electron microscopy ,Organic chemistry ,QD241-441 - Abstract
This study introduces an original concept in the development of hydrogel materials for controlled release of charged organic compounds based on semi-interpenetrating polymer networks composed by an inert gel-forming polymer component and interpenetrating linear polyelectrolyte with specific binding affinity towards the carried active compound. As it is experimentally illustrated on the prototype hydrogels prepared from agarose interpenetrated by poly(styrene sulfonate) (PSS) and alginate (ALG), respectively, the main benefit brought by this concept is represented by the ability to tune the mechanical and transport performance of the material independently via manipulating the relative content of the two structural components. A unique analytical methodology is proposed to provide complex insight into composition–structure–performance relationships in the hydrogel material combining methods of analysis on the macroscopic scale, but also in the specific microcosms of the gel network. Rheological analysis has confirmed that the complex modulus of the gels can be adjusted in a wide range by the gelling component (agarose) with negligible effect of the interpenetrating component (PSS or ALG). On the other hand, the content of PSS as low as 0.01 wt.% of the gel resulted in a more than 10-fold decrease of diffusivity of model-charged organic solute (Rhodamine 6G).
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- 2020
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15. Introducing the Newly Isolated Bacterium Aneurinibacillus sp. H1 as an Auspicious Thermophilic Producer of Various Polyhydroxyalkanoates (PHA) Copolymers–2. Material Study on the Produced Copolymers
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Petr Sedlacek, Iva Pernicova, Ivana Novackova, Xenie Kourilova, Michal Kalina, Adriana Kovalcik, Martin Koller, Jana Nebesarova, Vladislav Krzyzanek, Kamila Hrubanova, Jiri Masilko, Eva Slaninova, Monika Trudicova, and Stanislav Obruca
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polyhydroxyalkanoates ,thermophiles ,Aneurinibacillus sp. ,P(3HB-co-4HB) ,P(3HB-co-3HV-co-4HB) ,crystallinity ,Organic chemistry ,QD241-441 - Abstract
Aneurinibacillus sp. H1 is a promising, moderately thermophilic, novel Gram-positive bacterium capable of the biosynthesis of polyhydroxyalkanoates (PHA) with tunable monomer composition. In particular, the strain is able to synthesize copolymers of 3-hydroxybutyrate (3HB), 4-hydroxybutyrate (4HB) and 3-hydroxyvalerate (3HV) with remarkably high 4HB and 3HV fractions. In this study we performed an in-depth material analysis of PHA polymers produced by Aneurinibacillus sp. H1 in order to describe how the monomer composition affects fundamental structural and physicochemical parameters of the materials in the form of solvent-casted films. Results of infrared spectroscopy, X-ray diffractometry and thermal analysis clearly show that controlling the monomer composition enables optimization of PHA crystallinity both qualitatively (the type of the crystalline lattice) and quantitatively (the overall degree of crystallinity). Furthermore, resistance of the films against thermal and/or enzymatic degradation can also be manipulated by the monomer composition. Results of this study hence confirm Aneurinibacillus sp. H1 as an auspicious candidate for thermophilic production of PHA polymers with material properties that can be tuned together with their chemical composition by the corresponding adjustment of the cultivation process.
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- 2020
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16. Introducing the Newly Isolated Bacterium Aneurinibacillus sp. H1 as an Auspicious Thermophilic Producer of Various Polyhydroxyalkanoates (PHA) Copolymers–1. Isolation and Characterization of the Bacterium
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Iva Pernicova, Ivana Novackova, Petr Sedlacek, Xenie Kourilova, Michal Kalina, Adriana Kovalcik, Martin Koller, Jana Nebesarova, Vladislav Krzyzanek, Kamila Hrubanova, Jiri Masilko, Eva Slaninova, and Stanislav Obruca
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polyhydroxyalkanoates ,thermophiles ,Aneurinibacillus sp. ,P(3HB-co-4HB) ,P(3HB-co-3HV-co-4HB) ,Organic chemistry ,QD241-441 - Abstract
Extremophilic microorganisms are considered being very promising candidates for biotechnological production of various products including polyhydroxyalkanoates (PHA). The aim of this work was to evaluate the PHA production potential of a novel PHA-producing thermophilic Gram-positive isolate Aneurinibacillus sp. H1. This organism was capable of efficient conversion of glycerol into poly(3-hydroxybutyrate) (P3HB), the homopolyester of 3-hydroxybutyrate (3HB). In flasks experiment, under optimal cultivation temperature of 45 °C, the P3HB content in biomass and P3HB titers reached 55.31% of cell dry mass and 2.03 g/L, respectively. Further, the isolate was capable of biosynthesis of PHA copolymers and terpolymers containing high molar fractions of 3-hydroxyvalerate (3HV) and 4-hydroxybutyrate (4HB). Especially 4HB contents in PHA were very high (up to 91 mol %) when 1,4-butanediol was used as a substrate. Based on these results, it can be stated that Aneurinibacillus sp. H1 is a very promising candidate for production of PHA with tailored material properties.
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- 2020
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17. Prognostic discrimination based on the EUTOS long-term survival score within the International Registry for Chronic Myeloid Leukemia in children and adolescents
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Frédéric Millot, Joëlle Guilhot, Meinolf Suttorp, Adalet Meral Güneş, Petr Sedlacek, Eveline De Bont, Chi Kong Li, Krzysztof Kalwak, Birgitte Lausen, Srdjana Culic, Michael Dworzak, Emilia Kaiserova, Barbara De Moerloose, Farah Roula, Andrea Biondi, and André Baruchel
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
The EUTOS Long-Term Survival score was tested in 350 children with chronic myeloid leukemia in first chronic phase treated with imatinib and registered in the International Registry for Childhood Chronic Myeloid Leukemia. With a median follow up of 3 years (range, 1 month to 6 years) progression and/or death (whichever came first) occurred in 23 patients. For the entire cohort of patients the 5-year progression-free survival rate was 92% (95% CI: 87%–94%) and the 5-year survival accounting for chronic myeloid leukemia deaths was 97% (95% CI: 94%–99%). Of the 309 patients allocated to low (n=199), intermediate (n=68) and high (n=42) risk groups by the EUTOS Long-Term Survival score, events (progression and/or death) occurred in 6.0%, 8.8% and 26.2%, respectively. Estimates of the 5-year progression-free survival rates according to these three risk groups were 96% (95% CI: 92%–98%), 88% (95% CI: 76%–95%) and 67% (95% CI: 48%–81%), respectively. Differences in progression-free survival according to these risk groups were highly significant (P
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- 2017
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18. Biotechnological Production of Poly(3-Hydroxybutyrate-co-4-Hydroxybutyrate-co-3-Hydroxyvalerate) Terpolymer by Cupriavidus sp. DSM 19379
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Dan Kucera, Ivana Novackova, Iva Pernicova, Petr Sedlacek, and Stanislav Obruca
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polyhydroxyalkanoates ,terpolymer ,P(3HB-co-3HV-co-4HB) ,Cupriavidus malaysiensis ,Technology ,Biology (General) ,QH301-705.5 - Abstract
The terpolymer of 3-hydroxybutyrate (3HB), 3-hydroxyvalerate (3HV), and 4-hydroxybutyrate (4HB) was produced employing Cupriavidus sp. DSM 19379. Growth in the presence of γ-butyrolactone, ε-caprolactone, 1,4-butanediol, and 1,6-hexanediol resulted in the synthesis of a polymer consisting of 3HB and 4HB monomers. Single and two-stage terpolymer production strategies were utilized to incorporate the 3HV subunit into the polymer structure. At the single-stage cultivation mode, γ-butyrolactone or 1,4-butanediol served as the primary substrate and propionic and valeric acid as the precursor of 3HV. In the two-stage production, glycerol was used in the growth phase, and precursors for the formation of the terpolymer in combination with the nitrogen limitation in the medium were used in the second phase. The aim of this work was to maximize the Polyhydroxyalkanoates (PHA) yields with a high proportion of 3HV and 4HB using different culture strategies. The obtained polymers contained 0−29 mol% of 3HV and 16−32 mol% of 4HB. Selected polymers were subjected to a material properties analysis such as differential scanning calorimetry (DSC), thermogravimetry, and size exclusion chromatography coupled with multi angle light scattering (SEC-MALS) for determination of the molecular weight. The number of polymers in the biomass, as well as the monomer composition of the polymer were determined by gas chromatography.
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- 2019
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19. How Humic Acids Affect the Rheological and Transport Properties of Hydrogels
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Martina Klucakova, Jiri Smilek, and Petr Sedlacek
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humic acid ,hydrogel ,secondary structure ,rheology ,diffusion ,Organic chemistry ,QD241-441 - Abstract
Humic acids are often regarded as substances with a supramolecular structure which plays an important role in Nature. Their addition into hydrogels can affect their behavior and functioning in different applications. This work is focused on the properties of widely-used hydrogel based on agarose after addition of humic acids–the protonated H-form of humic acids and humic acids with methylated carboxylic groups. Hydrogels enriched by humic acids were studied in terms of their viscoelastic and transport properties. Rotational rheometry and methods employing diffusion cells were used in order to describe the influence of humic acids on the properties and behavior of hydrogels. From the point of view of rheology the addition of humic acids mainly affected the loss modulus corresponding to the relaxation of hydrogel connected with its flow. In the case of diffusion experiments, the transport of dyes (methylene blue and rhodamine) and metal ions (copper and nickel) through the hydrogel was affected by interactions between humic acids and the diffusion probes. The time lag in the hydrogel enriched by humic acids was prolonged for copper, methylene blue and rhodamine. In contrast, the presence of humic acids in hydrogel slightly increased the mobility of nickel. The strongest influence of the methylation of humic acids on diffusion was observed for methylene blue.
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- 2019
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20. Accumulation of Poly(3-hydroxybutyrate) Helps Bacterial Cells to Survive Freezing.
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Stanislav Obruca, Petr Sedlacek, Vladislav Krzyzanek, Filip Mravec, Kamila Hrubanova, Ota Samek, Dan Kucera, Pavla Benesova, and Ivana Marova
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Medicine ,Science - Abstract
Accumulation of polyhydroxybutyrate (PHB) seems to be a common metabolic strategy adopted by many bacteria to cope with cold environments. This work aimed at evaluating and understanding the cryoprotective effect of PHB. At first a monomer of PHB, 3-hydroxybutyrate, was identified as a potent cryoprotectant capable of protecting model enzyme (lipase), yeast (Saccharomyces cerevisiae) and bacterial cells (Cupriavidus necator) against the adverse effects of freezing-thawing cycles. Further, the viability of the frozen-thawed PHB accumulating strain of C. necator was compared to that of the PHB non-accumulating mutant. The presence of PHB granules in cells was revealed to be a significant advantage during freezing. This might be attributed to the higher intracellular level of 3-hydroxybutyrate in PHB accumulating cells (due to the action of parallel PHB synthesis and degradation, the so-called PHB cycle), but the cryoprotective effect of PHB granules seems to be more complex. Since intracellular PHB granules retain highly flexible properties even at extremely low temperatures (observed by cryo-SEM), it can be expected that PHB granules protect cells against injury from extracellular ice. Finally, thermal analysis indicates that PHB-containing cells exhibit a higher rate of transmembrane water transport, which protects cells against the formation of intracellular ice which usually has fatal consequences.
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- 2016
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21. Production of Polyhydroxyalkanoates Using Hydrolyzates of Spruce Sawdust: Comparison of Hydrolyzates Detoxification by Application of Overliming, Active Carbon, and Lignite
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Dan Kucera, Pavla Benesova, Peter Ladicky, Miloslav Pekar, Petr Sedlacek, and Stanislav Obruca
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polyhydroxyalkanoates ,detoxification ,lignite ,Burkholderia ,Technology ,Biology (General) ,QH301-705.5 - Abstract
Polyhydroxyalkanoates (PHAs) are bacterial polyesters which are considered biodegradable alternatives to petrochemical plastics. PHAs have a wide range of potential applications, however, the production cost of this bioplastic is several times higher. A major percentage of the final cost is represented by the price of the carbon source used in the fermentation. Burkholderia cepacia and Burkholderia sacchari are generally considered promising candidates for PHA production from lignocellulosic hydrolyzates. The wood waste biomass has been subjected to hydrolysis. The resulting hydrolyzate contained a sufficient amount of fermentable sugars. Growth experiments indicated a strong inhibition by the wood hydrolyzate. Over-liming and activated carbon as an adsorbent of inhibitors were employed for detoxification. All methods of detoxification had a positive influence on the growth of biomass and PHB production. Furthermore, lignite was identified as a promising alternative sorbent which can be used for detoxification of lignocellulose hydrolyzates. Detoxification using lignite instead of activated carbon had lower inhibitor removal efficiency, but greater positive impact on growth of the bacterial culture and overall PHA productivity. Moreover, lignite is a significantly less expensive adsorbent in comparison with activated charcoal and; moreover, used lignite can be simply utilized as a fuel to, at least partially, cover heat and energetic demands of fermentation, which should improve the economic feasibility of the process.
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- 2017
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22. Hematopoietic stem cell transplantation in thalassemia major and sickle cell disease: indications and management recommendations from an international expert panel
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Emanuele Angelucci, Susanne Matthes-Martin, Donatella Baronciani, Françoise Bernaudin, Sonia Bonanomi, Maria Domenica Cappellini, Jean-Hugues Dalle, Paolo Di Bartolomeo, Cristina Díaz de Heredia, Roswitha Dickerhoff, Claudio Giardini, Eliane Gluckman, Ayad Achmed Hussein, Naynesh Kamani, Milen Minkov, Franco Locatelli, Vanderson Rocha, Petr Sedlacek, Frans Smiers, Isabelle Thuret, Isaac Yaniv, Marina Cavazzana, and Christina Peters
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
Thalassemia major and sickle cell disease are the two most widely disseminated hereditary hemoglobinopathies in the world. The outlook for affected individuals has improved in recent years due to advances in medical management in the prevention and treatment of complications. However, hematopoietic stem cell transplantation is still the only available curative option. The use of hematopoietic stem cell transplantation has been increasing, and outcomes today have substantially improved compared with the past three decades. Current experience world-wide is that more than 90% of patients now survive hematopoietic stem cell transplantation and disease-free survival is around 80%. However, only a few controlled trials have been reported, and decisions on patient selection for hematopoietic stem cell transplantation and transplant management remain principally dependent on data from retrospective analyses and on the clinical experience of the transplant centers. This consensus document from the European Blood and Marrow Transplantation Inborn Error Working Party and the Paediatric Diseases Working Party aims to report new data and provide consensus-based recommendations on indications for hematopoietic stem cell transplantation and transplant management.
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- 2014
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23. Prognosis of children with mixed phenotype acute leukemia treated on the basis of consistent immunophenotypic criteria
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Ester Mejstrikova, Jana Volejnikova, Eva Fronkova, Katerina Zdrahalova, Tomas Kalina, Jaroslav Sterba, Yahia Jabali, Vladimir Mihal, Bohumir Blazek, Zdena Cerna, Daniela Prochazkova, Jiri Hak, Zuzana Zemanova, Marie Jarosova, Alexandra Oltova, Petr Sedlacek, Jiri Schwarz, Jan Zuna, Jan Trka, Jan Stary, and Ondrej Hrusak
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
Background Mixed phenotype acute leukemia (MPAL) represents a diagnostic and therapeutic dilemma. The European Group for the Immunological Classification of Leukemias (EGIL) scoring system unambiguously defines MPAL expressing aberrant lineage markers. Discussions surrounding it have focused on scoring details, and information is limited regarding its biological, clinical and prognostic significance. The recent World Health Organization classification is simpler and could replace the EGIL scoring system after transformation into unambiguous guidelines.Design and Methods Simple immunophenotypic criteria were used to classify all cases of childhood acute leukemia in order to provide therapy directed against acute lymphoblastic leukemia or acute myeloid leukemia. Prognosis, genotype and immunoglobulin/T-cell receptor gene rearrangement status were analyzed.Results The incidences of MPAL were 28/582 and 4/107 for children treated with acute lymphoblastic leukemia and acute myeloid leukemia regimens, respectively. In immunophenotypic principal component analysis, MPAL treated as T-cell acute lymphoblastic leukemia clustered between cases of non-mixed T-cell acute lymphoblastic leukemia and acute myeloid leukemia, while other MPAL cases were included in the respective non-mixed B-cell progenitor acute lymphoblastic leukemia or acute myeloid leukemia clusters. Analogously, immunoglobulin/T-cell receptor gene rearrangements followed the expected pattern in patients treated as having acute myeloid leukemia (non-rearranged, 4/4) or as having B-cell progenitor acute lymphoblastic leukemia (rearranged, 20/20), but were missing in 3/5 analyzed cases of MPAL treated as having T-cell acute lymphobastic leukemia. In patients who received acute lymphoblastic leukemia treatment, the 5-year event-free survival of the MPAL cases was worse than that of the non-mixed cases (53±10% and 76±2% at 5 years, respectively, P=0.0075), with a more pronounced difference among B lineage cases. The small numbers of MPAL cases treated as T-cell acute lymphoblastic leukemia or as acute myeloid leukemia hampered separate statistics. We compared prognosis of all subsets with the prognosis of previously published cohorts.Conclusions Simple immunophenotypic criteria are useful for therapy decisions in MPAL. In B lineage leukemia, MPAL confers poorer prognosis. However, our data do not justify a preferential use of current acute myeloid leukemia-based therapy in MPAL.
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- 2010
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24. Impact of genomic risk factors on outcome after hematopoietic stem cell transplantation for patients with chronic myeloid leukemia
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Anne M. Dickinson, Kim F. Pearce, Jean Norden, Stephen G. O’Brien, Ernst Holler, Heike Bickeböller, Yesilda Balavarca, Vanderson Rocha, Hans-Jochem Kolb, Ilona Hromadnikova, Petr Sedlacek, Dietger Niederwieser, Ronald Brand, Tapani Ruutu, Jane Apperley, Richard Szydlo, Els Goulmy, Wolfgang Siegert, Theo de Witte, and Alois Gratwohl
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
Background Non-HLA gene polymorphisms have been shown to influence outcome after allogeneic hematopoietic stem cell transplantation. Results were derived from heterogeneous, small populations and their value remains a matter of debate.Design and Methods In this study, we assessed the effect of single nucleotide polymorphisms in genes for interleukin 1 receptor antagonist (IL1RN), interleukin 4 (IL4), interleukin 6 (IL6), interleukin 10 (IL10), interferon (IFNG), tumor necrosis factor (TNF) and the cell surface receptors tumor necrosis factor receptor II (TNFRSFIB), vitamin D receptor (VDR) and estrogen receptor alpha (ESR1) in a homogeneous cohort of 228 HLA identical sibling transplants for chronic myeloid leukemia. Three good predictors of overall survival, identified via statistical methods including Cox regression analysis, were investigated for their effects on transplant-related mortality and relapse. Predictive power was assessed after integration into the established European Group for Blood and Marrow Transplantation (EBMT) risk score.Results Absence of patient TNFRSFIB 196R, absence of donor IL10 ATA/ACC and presence of donor IL1RN allele 2 genotypes were associated with increased transplantation-related mortality and decreased survival. Application of prediction error and concordance index statistics gave evidence that integration improved the EBMT risk score.Conclusions Non-HLA genotypes were associated with survival after allogeneic hematopoietic stem cell transplantation. When three genetic polymorphisms were added into the EBMT risk model they improved the goodness of fit. Non-HLA genotyping could, therefore, be used to improve donor selection algorithms and risk assessment prior to allogeneic hematopoietic stem cell transplantation.
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- 2010
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25. HLA-identical umbilical cord blood transplantation from a sibling donor in juvenile myelomonocytic leukemia
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Andrica C.H. de Vries, Robbert G.M. Bredius, Arjan C. Lankester, Marc Bierings, Monika Trebo, Petr Sedlacek, Charlotte M. Niemeyer, Marco Zecca, Franco Locatelli, and Marry M. van den Heuvel-Eibrink
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Published
- 2009
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26. Management of children and adolescents with chronic myeloid leukemia in blast phase
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Stephanie Sembill, Maria Ampatzidou, Sonali Chaudhury, Michael Dworzak, Krzysztof Kalwak, Axel Karow, Alexander Kiani, Manuela Krumbholz, Maaike Luesink, Nora Naumann-Bartsch, Barbara De Moerloose, Michael Osborn, Kirk R. Schultz, Petr Sedlacek, Fiorina Giona, Christian Michel Zwaan, Hiroyuki Shimada, Birgitta Versluijs, Frederic Millot, Nobuko Hijiya, Meinolf Suttorp, and Markus Metzler
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Cancer Research ,Oncology ,SDG 3 - Good Health and Well-being ,Medicine and Health Sciences ,Hematology - Abstract
Treatment of chronic myeloid leukemia has improved significantly with the introduction of tyrosine kinase inhibitors (TKIs), and treatment guidelines based on numerous clinical trials are available for chronic phase disease. However for CML in the blast phase (CML-BP), prognosis remains poor and treatment options are much more limited. The spectrum of treatment strategies for children and adolescents with CML-BP has largely evolved empirically and includes treatment principles derived from adult CML-BP and pediatric acute leukemia. Given this heterogeneity of treatment approaches, we formed an international panel of pediatric CML experts to develop recommendations for consistent therapy in children and adolescents with this high-risk disease based on the current literature and national standards. Recommendations include detailed information on initial diagnosis and treatment monitoring, differentiation from Philadelphia-positive acute leukemia, subtype-specific selection of induction therapy, and combination with tyrosine kinase inhibitors. Given that allogeneic hematopoietic stem cell transplantation currently remains the primary curative intervention for CML-BP, we also provide recommendations for the timing of transplantation, donor and graft selection, selection of a conditioning regimen and prophylaxis for graft-versus-host disease, post-transplant TKI therapy, and management of molecular relapse. Management according to the treatment recommendations presented here is intended to provide the basis for the design of future prospective clinical trials to improve outcomes for this challenging disease.
- Published
- 2023
27. Risk factors for a severe disease course in children with SARS-COV-2 infection following hematopoietic cell transplantation in the pre-Omicron period: a prospective multinational Infectious Disease Working Party from the European Society for Blood and Marrow Transplantation group (EBMT) and the Spanish Group of Hematopoietic Stem Cell Transplantation (GETH) study
- Author
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Dina Averbuch, Rafael de la Camara, Gloria Tridello, Nina Simone Knelange, Tatiana A. Bykova, Marianne Ifversen, Veronika Dobsinska, Mouhab Ayas, Amir Ali Hamidieh, Herbert Pichler, Antonio Perez-Martinez, Simone Cesaro, Mikael Sundin, Isabel Badell, Peter Bader, Jan-Erik Johansson, Oana Mirci-Danicar, Petr Sedlacek, Catherine Paillard, Brenda Gibson, Sarah Lawson, Nicolaus Kroeger, Selim Corbacioglu, Malgorzata Mikulska, Jose Luis Piñana, Jan Styczynski, and Per Ljungman
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Transplantation ,Hematology - Published
- 2023
28. Biosynthesis of versatile PHA copolymers by thermophilic members of the genus Aneurinibacillus
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Veronika, Rehakova, Iva, Pernicova, Xenie, Kourilova, Petr, Sedlacek, Jana, Musilova, Karel, Sedlar, Martin, Koller, Michal, Kalina, and Stanislav, Obruca
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Bacillales ,Structural Biology ,Polyhydroxyalkanoates ,Polyesters ,Fermentation ,General Medicine ,Molecular Biology ,Biochemistry - Abstract
Thermophilic members of the genus Aneurinibacillus constitute a remarkable group of microorganisms that exhibit extraordinary flexibility in terms of polyhydroxyalkanoates (PHA) synthesis. In this study, we demonstrate that these Gram-positive bacteria are capable of the utilization of selected lactones, namely, γ-valerolactone (GVL), γ-hexalactone (GHL), and δ-valerolactone (DVL) as the structural precursors of related PHA monomers. In the presence of GVL, a PHA copolymer consisting of 3-hydroxybutyrate, 3-hydroxyvalerate, and also 4-hydroxyvalerate was synthesized, with a 4 HV fraction as high as 53.1 mol%. Similarly, the application of GHL resulted in the synthesis of PHA copolymer containing 4-hydroxyhexanaote (4HHx) (4HHx fraction reached up to 11.5 mol%) and DVL was incorporated into PHA in form of 5-hydroxyvalerate (5 HV) (maximal 5 HV content was 44.2 mol%). The produced materials were characterized by thermoanalytical and spectroscopic methods; the results confirmed extremely appealing material properties of produced copolymers. Further, due to their unique metabolic features and capability of incorporating various PHA monomers into the PHA chain, thermophilic Aneurinibacillus spp. can be considered not only promising chassis for PHA production but also potential donors of PHA-relevant genes to improve PHA production in other thermophiles by using approaches of synthetic biology.
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- 2023
29. Prevalence of anemia at diagnosis of pediatric chronic myeloid leukemia and prognostic impact on the disease course
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Fanny Delehaye, Jérémie Rouger, David Brossier, Meinolf Suttorp, Adalet Meral Güneş, Petr Sedlacek, Birgitta Versluys, Chi Kong Li, Krzysztof Kalwak, Birgitte Lausen, Culic Srdjana, Michael Dworzak, Andrea Hraskova, Barbara De Moerloose, Farah Roula, Anaïs Briant, Jean-Jacques Parienti, Frédéric Millot, and Pediatrics
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Adult ,Imatinib Mesylate/therapeutic use ,Adolescent ,Protein Kinase Inhibitors/therapeutic use ,Leukemia, Myelogenous, Chronic, BCR-ABL Positive/drug therapy ,Antineoplastic Agents/therapeutic use ,Hematology ,General Medicine ,Prognosis ,Anemia/drug therapy ,Hemoglobins ,Prevalence ,Humans ,Child - Abstract
The clinical presentation of chronic myeloid leukemia (CML) at diagnosis differs in children compared to adults. At younger age, anemia appears to be frequent at diagnosis, but its prevalence and its impact on prognosis are not well known. In the International Registry of Childhood CML, we selected children and adolescents in chronic phase at diagnosis of CML and treated upfront with imatinib. We examined their hemoglobin level at diagnosis according to the WHO grades to assess the prevalence of anemia and its impact on response to tyrosine kinase inhibitors (TKIs). Data on 430 patients were included. Anemia at diagnosis was observed in 350 patients (81%), with a mean hemoglobin level of 96.4 g/l (SD 23.6). Among them, 182 patients (52%) presented with moderate anemia and 110 (31%) with severe anemia while 58 (17%) had mild anemia. Compared with mild and no anemia, moderate and severe forms were significantly associated with younger age at diagnosis, asthenia, splenomegaly, and increased leukocyte and basophil counts. Delays in achieving major and deep molecular responses were significantly increased for patients with moderate and severe anemia, and also failure of imatinib treatment was more frequent in these two sub-cohorts. However, hemoglobin level was not significantly associated with survival. Anemia at diagnosis of pediatric CML was frequent and may be considered as a prognostic factor.
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- 2022
30. Hematopoietic stem cell transplantation for adolescents and adults with inborn errors of immunity: an EBMT IEWP study
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Michael H. Albert, Tiarlan Sirait, Dirk-Jan Eikema, Katerina Bakunina, Claudia Wehr, Felipe Suarez, Maria Laura Fox, Nizar Mahlaoui, Andrew R. Gennery, Arjan C. Lankester, Rita Beier, Maria Ester Bernardo, Venetia Bigley, Caroline A. Lindemans, Siobhan O. Burns, Ben Carpenter, Jaroslaw Dybko, Tayfun Güngör, Fabian Hauck, Su Han Lum, Dmitry Balashov, Roland Meisel, Despina Moshous, Ansgar Schulz, Carsten Speckmann, Mary A. Slatter, Brigitte Strahm, Duygu Uckan-Cetinkaya, Isabelle Meyts, Tanja C. Vallée, Robert Wynn, Bénédicte Neven, Emma C. Morris, Alessandro Aiuti, Alexei Maschan, Mahmoud Aljurf, Tobias Gedde-Dahl, Gunhan Gurman, Victoria Bordon, Gergely Kriván, Franco Locatelli, Fulvio Porta, David Valcárcel, Yves Beguin, Maura Faraci, Nicolaus Kröger, Aleksandr Kulagin, Peter J. Shaw, Joan Hendrik Veelken, Cristina Diaz de Heredia, Franca Fagioli, Matthias Felber, Bernd Gruhn, Wolfgang Holter, Claudia Rössig, Petr Sedlacek, Jane Apperley, Mouhab Ayas, Ivana Bodova, Goda Choi, J.J. Cornelissen, Anne Sirvent, Anjum Khan, Alphan Kupesiz, Stig Lenhoff, Hakan Ozdogu, Nicolas von der Weid, Montserrat Rovira, Rik Schots, Donald C. Vinh, Clinical sciences, and Hematology
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Adult ,Adolescent ,adolescenti ,Trapianto ,Immunology ,Graft vs Host Disease ,Biochemistry ,Bronchiectasis/etiology ,Humans ,Transplantation, Homologous ,Hematopoietic Stem Cell Transplantation/adverse effects ,Child ,Retrospective Studies ,cellule staminali ematopoietiche ,Hematopoietic Stem Cell Transplantation ,Infant ,Trapianto, cellule staminali ematopoietiche, adolescenti ,Inborn errors of immunity ,Cell Biology ,Hematology ,Middle Aged ,Bronchiectasis ,surgical procedures, operative ,Settore MED/38 - PEDIATRIA GENERALE E SPECIALISTICA ,HSCT ,young adult - Abstract
Allogeneic hematopoietic stem cell transplantation (HSCT) is the gold standard curative therapy for infants and children with many inborn errors of immunity (IEI), but adolescents and adults with IEI are rarely referred for transplant. Lack of published HSCT outcome data outside small, single-center studies and perceived high risk of transplant-related mortality have delayed the adoption of HSCT for IEI patients presenting or developing significant organ damage later in life. This large retrospective, multicenter HSCT outcome study reports on 329 IEI patients (age range, 15-62.5 years at HSCT). Patients underwent first HSCT between 2000 and 2019. Primary endpoints were overall survival (OS) and event-free survival (EFS). We also evaluated the influence of IEI-subgroup and IEI-specific risk factors at HSCT, including infections, bronchiectasis, colitis, malignancy, inflammatory lung disease, splenectomy, hepatic dysfunction, and systemic immunosuppression. At a median follow-up of 44.3 months, the estimated OS at 1 and 5 years post-HSCT for all patients was 78% and 71%, and EFS was 65% and 62%, respectively, with low rates of severe acute (8%) or extensive chronic (7%) graft-versus-host disease. On univariate analysis, OS and EFS were inferior in patients with primary antibody deficiency, bronchiectasis, prior splenectomy, hepatic comorbidity, and higher hematopoietic cell transplant comorbidity index scores. On multivariable analysis, EFS was inferior in those with a higher number of IEI-associated complications. Neither age nor donor had a significant effect on OS or EFS. We have identified age-independent risk factors for adverse outcome, providing much needed evidence to identify which patients are most likely to benefit from HSCT. ispartof: BLOOD vol:140 issue:14 pages:1635-1649 ispartof: location:United States status: published
- Published
- 2022
31. Long-Term Data Confirm the Superiority of Total Body Irradiation-Containing Conditioning Regimen in Comparison to a Chemotherapy-Based Preparation in Children with Acute Lymphoblastic Leukemia Above the Age of 4 Years Given an Unmanipulated Allograft. Results of the Forum Randomized Clinical Trial
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Franco Locatelli, Peter Bader, Jean-Hugues Dalle, Ulrike Poetschger, Herbert Pichler, Petr Sedlacek, Jochen Büchner, Peter J. Shaw, Marianne Ifversen, Raquel Staciuk, Kim Vettenranta, Adriana Balduzzi, and Christina Peters
- Subjects
Immunology ,Cell Biology ,Hematology ,Biochemistry - Published
- 2022
32. Specific Cytogenetic Abnormalities at Diagnosis Predict Survival after Hematopoietic Cell Transplant in Poor-Risk Pediatric Acute Myeloid Leukemia: A PDWP/EBMT Study
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Akshay Sharma, Jacques-Emmanuel Galimard, Angharad Pryce, Senthil Bhoopalan, Arnaud Dalissier, Jean-Hugues Dalle, Franco Locatelli, Charlotte Jubert, Oana Mirci-Danicar, Vassiliki Kitra-Roussou, Yves Bertrand, Franca Fagioli, Fanny Rialland, Alessandra Biffi, Robert F Wynn, Gerard Michel, Francesco Paolo P Tambaro, Ali Abdallah Ahmari, Abdelghani Tbakhi, Caroline Furness, Miguel Ángel Díaz Pérez, Petr Sedlacek, Ivana Bodova, Maura Faraci, Kanchan Rao, Marie Thérèse Rubio, Brenda Gibson, Neel S. Bhatt, and Selim Corbacioglu
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Immunology ,Cell Biology ,Hematology ,Biochemistry - Published
- 2022
33. Relapse Is the Most Common Treatment Failure Post HSCT in Children with ALL below 4 Years of Age Given a Chemo-Based Conditioning Regimen. Results from the Prospective Multinational Forum-Trial
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Christina Peters, Ulrike Poetschger, Jean-Hugues Dalle, Akif Yesilipek, Jerry Stein, Herbert Pichler, Adriana Balduzzi, Franco Locatelli, Petr Sedlacek, Jacek Wachowiak, Tayfun Güngör, Marianne Ifversen, Marleen Renard, Tony H Truong, Raquel Staciuk, Peter J. Shaw, Gergely Kriván, Jochen Büchner, and Peter Bader
- Subjects
Immunology ,Cell Biology ,Hematology ,Biochemistry - Published
- 2022
34. Superior Graft-Versus-Leukemia Effect in Matched Unrelated Donor Versus HLA-Identical Sibling Pediatric Recipients Transplanted for Acute Lymphoblastic Leukemia within the Forum Study
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Jean-Hugues Dalle, Peter Bader, Akif Yesilipek, Franco Locatelli, Julia Palma, Jacek Wachowiak, Herbert Pichler, Marianne Ifversen, Gergely Kriván, Jochen Buechner, Cristina Díaz-de-Heredia, Marc Bierings, Raquel Staciuk, Tayfun Gungor, Jacek Toporski, Adriana Balduzzi, Ulrike Poetschger, Christina Peters, and Petr Sedlacek
- Subjects
Immunology ,Cell Biology ,Hematology ,Biochemistry - Published
- 2022
35. On the bioprotective effects of 3-hydroxybutyrate: thermodynamic study of binary 3HB-water systems
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Eva Slaninova, Stanislav Obruca, Vitaly Kocherbitov, and Petr Sedlacek
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cryoprotectant ,binary phase diagram ,Biophysics ,3-hydroxybutyrate ,Na3HB/water system - Abstract
Microorganisms must face various inconvenient conditions; therefore, they developed several approaches how to protect. Such a strategy is also the accumulation of compatible solutes, also called osmolytes. It was already proved that monomer units 3-hydroxybutyrate (3HB) which are present in sufficient concentration in poly(3-hydroxybutyrate) (PHB) accumulating cells, serve as a chemical chaperone protecting enzymes against heat and oxidative stress and as a cryoprotectant for enzymes, bacterial cells, and yeast. The stress robustness of the cells is also strongly dependent on the behavior and state of intracellular water, especially during stress exposure. For a better understanding of the protective mechanism and effect of strongly hydrophilic 3HB in solutions at a wide range of temperatures, a binary phase diagram of system Na3HB-water in equilibrium and the state diagrams showing the glass transitions in the system were constructed. To investigate the activity of water in various compositions of Na3HB-water system, three experimental techniques have been used (dynamic water sorption analysis, water activity measurements, and sorption calorimetry). Firstly, Na3HB proved its hydrophilic nature which is more than comparable to known compatible solutes (trehalose). Results of differential scanning calorimetry demonstrated that Na3HB is also highly effective in depressing the freezing point and generating a large amount of non-frozen water (1.35 g water per g of Na3HB). Therefore, Na3HB represents a very effective cryoprotectant that can be widely used for numerous applications.
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- 2022
36. Biochar surface functional groups as affected by biomass feedstock, biochar composition and pyrolysis temperature
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Jakub Hofman, Petr Sedlacek, Rainer Janu, Gerhard Soja, Lucie Bielská, Doris Ribitsch, and Verena Mrlik
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Characterization ,020209 energy ,Materials Science (miscellaneous) ,Analytical chemistry ,Infrared spectroscopy ,Fraction (chemistry) ,TP1-1185 ,02 engineering and technology ,010501 environmental sciences ,01 natural sciences ,Catalysis ,Specific surface area ,Biochar ,Linear regression ,0202 electrical engineering, electronic engineering, information engineering ,Spectroscopy ,0105 earth and related environmental sciences ,Chemistry ,Chemical technology ,Process Chemistry and Technology ,Sorption ,Carbonization ,Fuel Technology ,FTIR ,13. Climate action ,DRIFTS ,Principal component analysis ,Pyrolysis - Abstract
By testing 92 different biochars, this study had the objective to determine the relations between simple physico-chemical characteristics of biochar (elemental composition, ash fraction, specific surface area, process parameters) and infrared sorption characteristics revealing the presence of specific functional groups. The results of Diffusive Reflection Fourier Transformation Infrared Spectroscopy were statistically analyzed with multiple linear regression techniques and Principal Component Analysis (PCA) with the biochar characterization parameters as model inputs. The dominant parameters affecting the functional group signals were the pyrolysis temperature, the H/C-ratio and specific surface area of the biochar and the ash fraction. Regression models were able to explain 60–90% of data variance for specific peaks in the DRIFTS-spectra. The application of PCA could further reduce the input parameters to three main factors explaining 70.8% of total data variance. Biplots of the first two main factors showed the similarity of infrared spectra of biochars produced at 300 and 450 °C, whereas a pyrolysis temperature of 600 °C lead to a partial and a 750 °C to a nearly complete loss of biochar surface functional groups.
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- 2021
37. Fanconi Anemia in the Czech Republic: role of HSCT and long-term follow-up
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Martina Sukova, Petra Keslova, Petr Sedlacek, Marcela Malikova, Jan Stary, Spiros Tavandzis, Jaroslav Cermak, and Petr Smisek
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Oncology ,Czech ,Transplantation ,medicine.medical_specialty ,Long term follow up ,business.industry ,medicine.medical_treatment ,Bone marrow failure ,Hematopoietic stem cell transplantation ,Gene mutation ,medicine.disease ,language.human_language ,Fanconi anemia ,Internal medicine ,medicine ,language ,Molecular Medicine ,business - Published
- 2020
38. Production of Various Monomer-Ratio Biodegradable Poly(3-hydroxybutyrate-co-4-hydroxybutyrate) Films for Wide Range of Applications
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Aneta Pospíšilová, Juraj Vodicka, Monika Trudicova, Zuzana Juglova, Jiri Smilek, Přemysl Menčík, Jiří Másilko, Eva Slaninova, Veronika Melčová, Michal Kalina, Stanislav Obruča, and Petr Sedlacek
- Abstract
Films prepared from poly(3-hydroxybutyrate-co-4-hydroxybutyrate) copolymers produced by Aneurinibacillus sp. H1 using an automatic film applicator were homogeneous and had a defined thickness, which allowed a detailed study of physicochemical properties. Their properties were compared with a poly (3-hydroxybutyrate) homopolymer film prepared by the same procedure, which proved to be significantly more crystalline by DSC and XRD. Structural differences between samples had a major impact on their properties. With increasing 4-hydroxybutyrate content, the ductility and release rate of the model hydrophilic active ingredient increased significantly. Other observed properties, such as the release of the hydrophobic active substance, the contact angle with water and ethylene glycol, or the surface morphology and roughness, were also affected by the composition. The identified properties predetermine these copolymers for wide use in areas such as biomedicine or smart biodegradable packaging for food or cosmetics. The big advantage is the possibility of fine-tuning properties simply by changing the fermentation conditions.
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- 2022
39. Combination of Hypotonic Lysis and Application of Detergent for Isolation of Polyhydroxyalkanoates from Extremophiles
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Xenie Kourilova, Stanislav Obruca, Michal Kalina, Katerina Mrazova, Vladislav Krzyzanek, Petr Sedlacek, Martin Koller, and Ivana Novackova
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Polymers and Plastics ,Schlegelella thermodepolymerans ,polyhydroxyalkanoate (PHA) ,sodium dodecyl sulfate (SDS) ,PHA isolation ,extremophiles ,halophiles ,thermophiles ,Halomonas halophila ,General Chemistry - Abstract
Production of polyhydroxyalkanoates (PHA), microbial biopolyesters, employing extremophilic microorganisms is a very promising concept relying on robustness of such organisms against microbial contamination, which provides numerous economic and technological benefits. In this work, we took advantage of the natural susceptibility of halophilic and thermophilic PHA producers to hypotonic lysis and we developed a simple and robust approach enabling effective isolation of PHA materials from microbial cells. The method is based on the exposition of microbial cells to hypotonic conditions induced by the diluted solution of sodium dodecyl sulfate (SDS) at elevated temperatures. Such conditions lead to disruption of the cells and release of PHA granules. Moreover, SDS, apart from its cell-disruptive function, also solubilizes hydrophobic components, which would otherwise contaminate PHA materials. The purity of obtained materials, as well as the yields of recovery, reach high values (values of purity higher than 99 wt.%, yields close to 1). Furthermore, we also focused on the removal of SDS from wastewater. The simple, inexpensive, and safe technique is based on the precipitation of SDS in the presence of KCl. The precipitate can be simply removed by decantation or centrifugation. Moreover, there is also the possibility to regenerate the SDS, which would substantially improve the economic feasibility of the process.
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- 2022
40. Degradation of P(3HB
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Juraj, Vodicka, Monika, Wikarska, Monika, Trudicova, Zuzana, Juglova, Aneta, Pospisilova, Michal, Kalina, Eva, Slaninova, Stanislav, Obruca, and Petr, Sedlacek
- Abstract
A novel model of biodegradable PHA copolymer films preparation was applied to evaluate the biodegradability of various PHA copolymers and to discuss its biomedical applicability. In this study, we illustrate the potential biomaterial degradation rate affectability by manipulation of monomer composition via controlling the biosynthetic strategies. Within the experimental investigation, we have prepared two different copolymers of 3-hydroxybutyrate and 4-hydroxybutyrate-P(3HB
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- 2022
41. Progress and trends in pediatric hematopoietic cell transplantation in Central-East European countries
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Jan Styczyński, Pavlyk Serhii, Jacek Wachowiak, Gergely Kriván, Oleksandr Lysytsia, Janez Jazbec, Jelena Rascon, Petr Sedlacek, Jelena Roganović, Anca Colita, Peter Svec, Ernest Bilić, Krzysztof Czyżewski, and Jaroslav Štěrba
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Czech ,BIOMEDICINE AND HEALTHCARE. Clinical Medical Sciences ,Pediatric transplant ,03 medical and health sciences ,0302 clinical medicine ,children ,Human biology ,hematopoietic cell transplantation ,Socioeconomics ,Hematopoietic cell ,BIOMEDICINA I ZDRAVSTVO. Kliničke medicinske znanosti ,Hematology ,language.human_language ,Eastern european ,Transplantation ,surgical procedures, operative ,Geography ,Oncology ,030220 oncology & carcinogenesis ,Central-Eastern European countries ,language ,geographic locations ,030215 immunology ,Pediatric population - Abstract
Hematopoietic cell transplantation (HCT) is widely used as a treatment for acquired and congenital disorders. In recent years, a significant increase in transplant activity around the world has been observed, especially in Eastern European countries. This article aimed to assess progress and trends in pediatric HCT in Central-Eastern European countries between 2013 and 2018. Transplant activity survey in 2013 and 2018 in nine Central-Eastern European countries (Czech Republic, Croatia, Hungary, Lithuania, Poland, Romania, Slovakia, Slovenia, and Ukraine) was performed. The highest transplant rates in total were found in the Czech Republic and Hungary. When calculated per 10 million of the pediatric population, a 25.9% increase in the number of allo-HCT was observed with the highest in Croatia, Romania, Lithuania, and Poland; and a 12.2% increase in the number of auto-HCT was observed with the highest in Slovenia, Slovakia, Romania, Poland, Ukraine, and Croatia. We have shown, over the years 2013 and 2018, in some countries of Central-Eastern Europe that there was a significant increase in transplant activity, especially in those with the lower rates. This increase was observed mainly in centers already existing in 2013, especially in the allo-HCT setting. The rise of activity was significantly less influenced by the creation of new transplant centers or the increase in the number of pediatric transplant beds. In conclusion, our analysis indicates that in the Czech Republic, Hungary, Lithuania, and Slovenia, the actual infrastructure and the number of HCTs cover the needs, whereas in other countries, especially in Romania and Ukraine, the number of HCT needs to be increased.
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- 2020
42. Lymphoblastic predominance of blastic phase in children with chronic myeloid leukaemia treated with imatinib: A report from the I-CML-Ped Study
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Petr Sedlacek, Krzysztof Kałwak, Arnaud Petit, Chi Kong Li, Joelle Guilhot, Frédéric Millot, Eveline S. J. M. de Bont, Barbara De Moerloose, Meinolf Suttorp, Andrea Biondi, Deborah Meyran, Srdjana Culic, Birgitte Lausen, Université de Paris (UP), AP-HP Hôpital universitaire Robert-Debré [Paris], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), Service d'hématologie-immunologie-oncologie pédiatrique [CHU Trousseau], CHU Trousseau [APHP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU), CIC - Poitiers, Université de Poitiers-Centre hospitalier universitaire de Poitiers (CHU Poitiers)-Direction Générale de l'Organisation des Soins (DGOS)-Institut National de la Santé et de la Recherche Médicale (INSERM), Meyran, D, Petit, A, Guilhot, J, Suttorp, M, Sedlacek, P, De Bont, E, Li, C, Kalwak, K, Lausen, B, Culic, S, de Moerloose, B, Biondi, A, and Millot, F
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Male ,0301 basic medicine ,Cancer Research ,[SDV]Life Sciences [q-bio] ,RECOMMENDATIONS ,Tyrosine-kinase inhibitor ,Chronic myeloid leukaemia ,Children ,Accelerated phase ,Blastic phase ,Tyrosine kinase inhibitors ,Haematopoietic stem cell transplantation ,0302 clinical medicine ,hemic and lymphatic diseases ,Cumulative incidence ,Lymphocytes ,Child ,Incidence (epidemiology) ,CHRONIC MYELOGENOUS LEUKEMIA ,3. Good health ,Oncology ,Child, Preschool ,030220 oncology & carcinogenesis ,Imatinib Mesylate ,Female ,PROGNOSTIC DISCRIMINATION ,medicine.drug ,medicine.medical_specialty ,Adolescent ,medicine.drug_class ,Accelerated phase, Blastic phase, Children, Chronic myeloid leukaemia, Haematopoietic stem cell transplantation, Tyrosine kinase inhibitors ,Blastic Phase ,DIAGNOSIS ,03 medical and health sciences ,ADHERENCE ,Leukemia, Myelogenous, Chronic, BCR-ABL Positive ,Internal medicine ,MANAGEMENT ,medicine ,Humans ,neoplasms ,business.industry ,Infant ,Imatinib ,KINASE INHIBITOR ERA ,YOUNGER PATIENTS ,medicine.disease ,RANDOMIZED CML ,Transplantation ,030104 developmental biology ,Blast Crisis ,FOLLOW-UP ,business ,Chronic myelogenous leukemia ,Rare disease - Abstract
Background: Chronic myeloid leukaemia (CML) is a rare disease in children. The frequency and outcome of children evolving to accelerated phase (AP) or blastic phase (BP) under treatment with imatinib is unknown. The aim of the current study is to assess the inci-dence of progression from CML in chronic phase with imatinib frontline in a paediatric setting and describe the management and outcome of these patients.Patients and methods: In the I-CML-Ped Study database (www.clinicaltrials.gov, #NCT01281735), 19 of 339 paediatric patients in chronic phase treated with imatinib in the frontline evolved to CML-AP or CML-BP.Results: With a median follow-up of 38 months (range: 2-190 months), the cumulative inci-dence of progression at 1 and 3 years was 3% (confidence interval [CI] 95%: 1-5%) and 7% (CI 95%: 4-11%), respectively. We observed a large predominance of lymphoid-BP (70%) over myeloid-BP (30%) with imatinib in frontline therapy. Sixteen patients underwent haemato-poietic stem cell transplantation, and eight were treated with a tyrosine kinase inhibitor after transplant. Only the transplanted patients are alive. The 5-year overall survival rate of children with CML-AP/BP is 44%, with no statistical difference between the lymphoid-BP and myeloid-BP outcome.Conclusion: Children evolving to AP or BP under treatment with imatinib have a very poor prognosis with an overall survival under 50%, much worse than children with advanced phase at diagnosis. (c) 2020 Elsevier Ltd. All rights reserved.
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- 2020
43. Supportive care during pediatric hematopoietic stem cell transplantation: beyond infectious diseases. A report from workshops on supportive care of the Pediatric Diseases Working Party (PDWP) of the European Society for Blood and Marrow Transplantation (EBMT)
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Krzysztof Kałwak, Peter Bader, Alice Bertaina, Riitta Niinimäki, Tayfun Güngör, Brenda Gibson, Marianne Ifversen, Marc Ansari, Christina Diaz de Heredia, Akif Yesilipek, Tiago Nava, Jerry Stein, Jochen Buechner, E. Trigoso, Jacek Wachowiak, Marco Deiana, Koray Yalcin, Christina Peters, Halvard Boenig, Simone Cesaro, Isaac Yaniv, Gergely Kriván, Kim Vettenranta, Toni Matic, Dominik Turkiewicz, Roland Meisel, Michaela Kuhlen, Giovanna Lucchini, Shahrzad Bakhtiar, Andre Willasch, Luisa Sisinni, Petr Sedlacek, Daphna Hutt, Thomas Lehrnbecher, Anita Lawitschka, Adriana Balduzzi, Jean Hugues Dalle, Tamara Diesch, Arnaud Dalissier, Selim Corbacioglu, Andrea Jarisch, Ulrike Falkenberg, Nava, T, Ansari, M, Dalle, J, de Heredia, C, Güngör, T, Trigoso, E, Falkenberg, U, Bertaina, A, Gibson, B, Jarisch, A, Balduzzi, A, Boenig, H, Krivan, G, Vettenranta, K, Matic, T, Büchner, J, Kalwak, K, Lawitschka, A, Yesilipek, A, Lucchini, G, Peters, C, Turkiewicz, D, Niinimäki, R, Diesch, T, Lehrnbecher, T, Sedlacek, P, Hutt, D, Dalissier, A, Wachowiak, J, Yaniv, I, Stein, J, Yalçin, K, Sisinni, L, Deiana, M, Ifversen, M, Kuhlen, M, Miesel, R, Bakhtiar, S, Cesaro, S, Willasch, A, Corbacioglu, S, and Bader, P
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HEPATIC VENOOCCLUSIVE DISEASE ,medicine.medical_specialty ,bone marrow transplantation ,medicine.medical_treatment ,MEDLINE ,ENTERAL NUTRITION ,Hematopoietic stem cell transplantation ,ORAL MUCOSITIS ,Communicable Diseases ,03 medical and health sciences ,bone marrow transplantation, pediatric, supportive care ,0302 clinical medicine ,Bone Marrow ,Internal medicine ,IRON OVERLOAD ,Mucositis ,Humans ,Medicine ,Child ,Intensive care medicine ,SYNDROME/VENO-OCCLUSIVE DISEASE ,ANTICIPATORY NAUSEA ,Transplantation ,Hematology ,business.industry ,Marrow transplantation ,Research ,Hematopoietic Stem Cell Transplantation ,SEVERITY CRITERIA ,medicine.disease ,supportive care, hematopoietic stem cell transplantation, pediatric ,URSODEOXYCHOLIC ACID ,Europe ,supportive care ,Leukemia ,pediatric ,ANTINEOPLASTIC MEDICATION ,surgical procedures, operative ,Parenteral nutrition ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Bone marrow ,business ,CHEMOTHERAPY-INDUCED NAUSEA ,030215 immunology - Abstract
Hematopoietic stem cell transplantation (HSCT) is currently the standard of care for many malignant and nonmalignant blood diseases. As several treatment-emerging acute toxicities are expected, optimal supportive measurements critically affect HSCT outcomes. The paucity of good clinical studies in supportive practices gives rise to the establishment of heterogeneous guidelines across the different centers, which hampers direct clinical comparison in multicentric studies. Aiming to harmonize the supportive care provided during the pediatric HSCT in Europe, the Pediatric Diseases Working Party (PDWP) of the European Society for Blood and Marrow Transplantation (EBMT) promoted dedicated workshops during the years 2017 and 2018. The present paper describes the resulting consensus on the management of sinusoidal obstructive syndrome, mucositis, enteral and parenteral nutrition, iron overload, and emesis during HSCT.
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- 2020
44. Application of osmotic challenge for enrichment of microbial consortia in polyhydroxyalkanoates producing thermophilic and thermotolerant bacteria and their subsequent isolation
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Iva Pernicova, Martin Koller, Ivana Novackova, Xenie Kourilova, Stanislav Obruca, and Petr Sedlacek
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DNA, Bacterial ,Thermotolerance ,Osmosis ,Hot Temperature ,food.ingredient ,Microbial Consortia ,Bacillus ,chemical and pharmacologic phenomena ,02 engineering and technology ,Biochemistry ,Polyhydroxyalkanoates ,Chelatococcus ,03 medical and health sciences ,Bioreactors ,food ,Structural Biology ,Extremophile ,Osmotic pressure ,Food science ,Molecular Biology ,Alphaproteobacteria ,030304 developmental biology ,Bacillales ,0303 health sciences ,Bacteria ,Base Sequence ,biology ,Chemistry ,Thermophile ,General Medicine ,021001 nanoscience & nanotechnology ,Isolation (microbiology) ,biology.organism_classification ,Fermentation ,0210 nano-technology - Abstract
Polyhydroxyalkanoates are microbial polyesters which are considered being biological alternatives to petrochemical polymers. Extremophiles, such as thermophilic PHA producers, hold promise to improve competitiveness of PHA production process. Therefore, this work aimed at isolation of new strains, which could produce PHA under elevated temperature. Since traditional Nile red staining of colonies provided false positive results in thermophiles, we developed a novel strategy of enriching microbial consortia by PHA producers. This so called "osmoselective strategy" is based on application of osmotic challenge by sudden exposition of the mixed microbial culture to hypertonic and subsequently to hypotonic conditions; moreover, this strategy relies on the fact that PHA protect bacteria from negative effects of rapid fluctuations in osmotic pressure. In combination with fast and reliable ATR-FTIR inspection of selected colonies for presence of PHA, we were able to isolate several promising thermophilic or thermotolerant PHA producing strains belonging to the genera Bacillus, Aneurinibacillus and Chelatococcus, which indeed deserves further investigation to evaluate their potential for industrial production of PHA.
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- 2020
45. Total body irradiation is a crucial risk factor for developing secondary carcinomas after allogeneic hematopoietic stem cell transplantation in childhood
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Renata Formankova, Marta Snajderova, Lucie Sramkova, Bela Malinova, Petra Keslova, Petr Sedlacek, Petr Riha, Jaroslav Sterba, Ales Luks, and Jan Stary
- Subjects
Male ,Cancer Research ,medicine.medical_specialty ,Neoplasms, Radiation-Induced ,Transplantation Conditioning ,Allogeneic transplantation ,medicine.medical_treatment ,Hematopoietic stem cell transplantation ,030204 cardiovascular system & hematology ,03 medical and health sciences ,0302 clinical medicine ,Risk Factors ,Internal medicine ,Humans ,Transplantation, Homologous ,Medicine ,Cumulative incidence ,Risk factor ,Child ,business.industry ,Incidence (epidemiology) ,Hematopoietic Stem Cell Transplantation ,Neoplasms, Second Primary ,Total body irradiation ,3. Good health ,Transplantation ,Regimen ,Oncology ,Female ,business ,Whole-Body Irradiation ,030217 neurology & neurosurgery - Abstract
Allogeneic hematopoietic stem cell transplantation (HSCT) has become a standard part of therapy for a variety of malignant and non-malignant disorders. With improved outcomes after HSCT, increasing attention has been drawn to late complications in long-term survivors. The development of secondary malignancies is recognized as one of the most serious complications. We have evaluated data from 426 patients (272 males, 154 females) who underwent allogeneic transplantation at a median age of 7.9 years from 1989 till 2017 and were alive more than one year after transplantation for the occurrence of secondary solid tumors. We have documented the occurrence of secondary solid tumors in 20 patients (4.7%). The median duration of the development of secondary solid cancer from HSCT was 11.7 (range, 5.4-21.5 years). 18 out of 20 patients (90%) had total body irradiation (TBI) 12-14.4 Gy as a part of a conditioning regimen. All but two had transplantation for malignant disease. All patients underwent surgery and/or chemo-radiotherapy. Eighteen are alive, and two died due to the progression of their secondary malignancy. The most frequent solid cancer was thyroid carcinoma (n=9). Cumulative incidence of secondary solid cancer in all groups was 15.2±3.9%, in a group using TBI based regimen 34.7±8.9%, in non-TBI (only chemo) group was 1.5±1.1%. Overall, the cumulative incidence is statistically significantly different between the TBI based and non-TBI (chemo only) group. The incidence and number of complications following allogeneic HSCT in childhood are increasing in time. The early diagnosis of secondary malignancies is one of the key tasks of long-life multidisciplinary post-transplant care.
- Published
- 2020
46. The macroeconomic impact of Trump
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Gernot J. Müller, Benjamin Born, Petr Sedlacek, and Moritz Schularick
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2019-20 coronavirus outbreak ,geography.geographical_feature_category ,Coronavirus disease 2019 (COVID-19) ,biology ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,05 social sciences ,0211 other engineering and technologies ,021107 urban & regional planning ,02 engineering and technology ,0506 political science ,Geography ,Toll ,Political Science and International Relations ,Pandemic ,Spring (hydrology) ,050602 political science & public administration ,Economic history ,biology.protein - Abstract
How much credit does Donald Trump deserve for the macroeconomic performance of the US economy? Growth and job creation have been robust during the first 2.5 years of his presidential term, but this does not prove that Trump made a difference. In this note we develop a counterfactual scenario for how the US economy would have evolved without Trump—we let a matching algorithm determine which combination of other economies best resembles the pre-election path of the US economy. We then compare the post-election performance of the US economy to this synthetic “doppelganger”. There is little evidence for a Trump effect.
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- 2022
47. Tailoring the internal microstructue of the hydrogels based on poly-HEMA targeted for drug delivery systems
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Monika TRUDICOVA, Hana PAPEZIKOVA, Petr SEDLACEK, and Miloslav PEKAR
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drug delivery systems ,transport properties ,poly(2-hydroxyethyl methacrylate) ,hydrogel - Abstract
The transport and barrier properties are important material characteristics in terms of the development of the targeted drug delivery systems. Therefore, this work focused on the study of the possibility of influencing these properties and internal architecture in a model hydrogel system formed by a semi-interpenetrating polymer network with an incorporated polyelectrolyte component. Due to its application potential and its extensive use in medicine, poly(2-hydroxyethyl methacrylate) was chosen as the model hydrogel system for this work. Sodium polystyrene sulfonate was used as the interpenetrating linear polymer. Scanning electron microscopy was used to examine the structure of the three-dimensional hydrogel network. Transport properties were monitored by diffusion tests. Furthermore, diffusion through the hydrogel (barrier properties) was monitored using diffusion cells (Franz cells, horizontal cells). The usability of the semi-interpenetrating polymer network concept for the preparation of materials with tunable relevant properties was confirmed on the proposed materials.
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- 2022
48. Early-onset pulmonary and cutaneous vasculitis driven by constitutively active SRC-family kinase HCK
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Jan Lebl, Eva Fronkova, Petr Novák, Tomas Brdicka, Marcela Dvorakova, Min Ae Lee-Kirsch, Jarmila Králová, Milan Macek, Ludmila Hornofova, Anna Sediva, Vendula Martinu, Jana Kayserova, Miroslav Koblizek, Michael Svaton, Petr Sedlacek, Ashleigh R Poh, Olga Zimmermannova, Ales Janda, Jana Paderova, Matthias Ernst, Tomas Kalina, Zuzana Parackova, Tamara Svobodová, Adam Klocperk, Stepanka Pruhova, Ondrej Hrusak, Veronika Kanderova, Simon Borna, Petr Pohunek, and Martina Fejtkova
- Subjects
Vasculitis ,Cluster of differentiation ,Janus kinase 1 ,business.industry ,Immunology ,Immune dysregulation ,medicine.disease_cause ,Proinflammatory cytokine ,Autoimmunity ,src-Family Kinases ,Immune system ,Proto-Oncogene Proteins ,Proto-Oncogene Proteins c-hck ,medicine ,Humans ,Immunology and Allergy ,Src family kinase ,Kinase activity ,business ,Lung ,Uncategorized - Abstract
Background Inborn errors of immunity are genetic disorders characterized by various degrees of immune dysregulation that can manifest as immune deficiency, autoimmunity, or autoinflammation. The routine use of next-generation sequencing in the clinic has facilitated the identification of an ever-increasing number of inborn errors of immunity, revealing the roles of immunologically important genes in human pathologies. However, despite this progress, treatment is still extremely challenging. Objective We sought to report a new monogenic autoinflammatory disorder caused by a de novo activating mutation, p.Tyr515∗, in hematopoietic cell kinase (HCK). The disease is characterized by cutaneous vasculitis and chronic pulmonary inflammation that progresses to fibrosis. Methods Whole-exome sequencing, Sanger sequencing, mass spectrometry, and western blotting were performed to identify and characterize the pathogenic HCK mutation. Dysregulation of mutant HCK was confirmed ex vivo in primary cells and in vitro in transduced cell lines. Results Mutant HCK lacking the C-terminal inhibitory tyrosine Tyr522 exhibited increased kinase activity and enhanced myeloid cell priming, migration and effector functions, such as production of the inflammatory cytokines IL-1β, IL-6, IL-8, and TNF-α, and production of reactive oxygen species. These aberrant functions were reflected by inflammatory leukocyte infiltration of the lungs and skin. Moreover, an overview of the clinical course of the disease, including therapies, provides evidence for the therapeutic efficacy of the Janus kinase 1/2 inhibitor ruxolitinib in inflammatory lung disease. Conclusions We propose HCK-driven pulmonary and cutaneous vasculitis as a novel autoinflammatory disorder of inborn errors of immunity.
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- 2022
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49. TLR8/TLR7 dysregulation due to a novel TLR8 mutation causes severe autoimmune hemolytic anemia and autoinflammation in identical twins
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Martina Fejtkova, Martina Sukova, Katerina Hlozkova, Karolina Skvarova Kramarzova, Marketa Rackova, David Jakubec, Marina Bakardjieva, Marketa Bloomfield, Adam Klocperk, Zuzana Parackova, Anna Sediva, Jahnavi Aluri, Michaela Novakova, Tomas Kalina, Eva Fronkova, Ondrej Hrusak, Hana Malcova, Petr Sedlacek, Zuzana Liba, Martin Kudr, Jan Stary, Megan A. Cooper, Michael Svaton, and Veronika Kanderova
- Subjects
Inflammation ,Male ,HEK293 Cells ,Toll-Like Receptor 7 ,Toll-Like Receptor 8 ,Mutation ,Patient Acuity ,Cytokines ,Humans ,Female ,Hematology ,Anemia, Hemolytic, Autoimmune ,Twins, Monozygotic - Abstract
Our study presents a novel germline c.1715GT (p.G572V) mutation in the gene encoding Toll-like receptor 8 (TLR8) causing an autoimmune and autoinflammatory disorder in a family with monozygotic male twins, who suffer from severe autoimmune hemolytic anemia worsening with infections, and autoinflammation presenting as fevers, enteritis, arthritis, and CNS vasculitis. The pathogenicity of the mutation was confirmed by in vitro assays on transfected cell lines and primary cells. The p.G572V mutation causes impaired stability of the TLR8 protein, cross-reactivity to TLR7 ligands and reduced ability of TLR8 to attenuate TLR7 signaling. This imbalance toward TLR7-dependent signaling leads to increased pro-inflammatory responses, such as nuclear factor-κB (NF-κB) activation and production of pro-inflammatory cytokines IL-1β, IL-6, and TNFα. This unique TLR8 mutation with partial TLR8 protein loss and hyperinflammatory phenotype mediated by TLR7 ligands represents a novel inborn error of immunity with childhood-onset and a good response to TLR7 inhibition.
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- 2021
50. The role of polyhydroxyalkanoates in adaptation of Cupriavidus necator to osmotic pressure and high concentration of copper ions
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Ivana Novackova, Vendula Hrabalova, Eva Slaninova, Petr Sedlacek, Ota Samek, Martin Koller, Vladislav Krzyzanek, Kamila Hrubanova, Katerina Mrazova, Jana Nebesarova, and Stanislav Obruca
- Subjects
Ions ,Structural Biology ,Osmotic Pressure ,Polyhydroxyalkanoates ,Cupriavidus necator ,General Medicine ,Sodium Chloride ,Molecular Biology ,Biochemistry ,Copper - Abstract
Polyhydroxyalkanoates (PHA) are abundant microbial polyesters accumulated in the form of intracellular granules by numerous prokaryotes primarily as storage of carbon and energy. Apart from their storage function, the presence of PHA also enhances the robustness of the microbial cells against various stressors. In this work, we investigated the role of PHA in Cupriavidus necator, a model organism concerning PHA metabolism, for adaptation to osmotic pressure and copper ions. In long-term laboratory evolution experiments, the bacterial culture was cultivated in presence of elevated doses of sodium chloride or copper ions (incubations lasted 78 passages for Cu
- Published
- 2021
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