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2. Toward a consistency cross-check of eddy covariance flux–based and biometric estimates of ecosystem carbon balance

Author

Luyssaert, S., Reichstein, M., Schulze, E., Janssens, I. A., Law, B. E., Papale, D., Dragoni, D., Goulden, M. L., Granier, A., Kutsch, W. L., Linder, S., Matteucci, G., Moors, E., Munger, J. W., Pilegaard, K., Saunders, M., and Falge, E. M.

Subjects
gross primary production, net primary production, autotrophic respiration, heterotrophic respiration, net ecosystem production
Abstract

Quantification of an ecosystem's carbon balance and its components is pivotal for understanding both ecosystem functioning and global cycling. Several methods are being applied in parallel to estimate the different components of the CO2 balance. However, different methods are subject to different sources of error. Therefore, it is necessary that site level component estimates are cross-checked against each other before being reported. Here we present a two-step approach for testing the accuracy and consistency of eddy covariance–based gross primary production (GPP) and ecosystem respiration (Re) estimates with biometric measurements of net primary production (NPP), autotrophic (Ra) and heterotrophic (Rh) respiration. The test starts with closing the CO2 balance to account for reasonable errors in each of the component fluxes. Failure to do so within the constraints will classify the flux estimates on the site level as inconsistent. If the CO2 balance can be closed, the test continues by comparing the closed site level Ra/GPP with the Rh/GPP ratio. The consistency of these ratios is then judged against expert knowledge. Flux estimates of sites that pass both steps are considered consistent. An inconsistent ratio is not necessarily incorrect but provides a signal for careful data screening that may require further analysis to identify the possible biological reasons of the unexpected ratios. We reviewed the literature and found 16 sites, out of a total of 529 research forest sites, that met the data requirements for the consistency test. Thirteen of these sites passed both steps of the consistency cross-check. Subsequently, flux ratios (NPP/GPP, Rh/NPP, Rh/Re, and Re/GPP) were calculated for the consistent sites. Similar ratios were observed at sites which lacked information to check consistency, indicating that the flux data that are currently used for validating models and testing ecological hypotheses are largely consistent across a wide range of site productivities. Confidence in the output of flux networks could be further enhanced if the required fluxes are independently estimated at all sites for multiple years and harmonized methods are used.

Published
2009

3. Carbon Balance Gradient in European Forests: Should We Doubt 'Surprising' Results? A Reply to Piovesan & Adams

Author

Jarvis, P. G., Dolman, A. J., Matteucci, G., Kowalski, A. S., Ceulemans, R., Rebmann, C., Moors, E. J., Granier, A., Gross, P., Jensen, N. O., Pilegaard, K., Lindroth, A., Grelle, A., Grünwald, T., Aubinet, M., Vesala, T., Rannik, Ü., Berbigier, P., Loustau, D., Guðmundson, J., Ibrom, A., Morgenstern, K., Clement, R., Moncrieff, J., Montagnani, L., Minerbi, S., and Valentini, R.

Published
2001

6. Methodology for Data Acquisition, Storage, and Treatment

Author

Aubinet, M., Clement, R., Elbers, J. A., Foken, T., Grelle, A., Ibrom, A., Moncrieff, J., Pilegaard, K., Rannik, Ü., Rebmann, C., Baldwin, I. T., editor, Caldwell, M. M., editor, Heldmaier, G., editor, Lange, O. L., editor, Mooney, H. A., editor, Schulze, E.-D., editor, Sommer, U., editor, and Valentini, Riccardo, editor

Published
2003
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7. A Model-Based Study of Carbon Fluxes at Ten European Forest Sites

Author

Falge, E., Tenhunen, J., Aubinet, M., Bernhofer, C., Clement, R., Granier, A., Kowalski, A., Moors, E., Pilegaard, K., Rannik, Ü., Rebmann, C., Baldwin, I. T., editor, Caldwell, M. M., editor, Heldmaier, G., editor, Lange, O. L., editor, Mooney, H. A., editor, Schulze, E.-D., editor, Sommer, U., editor, and Valentini, Riccardo, editor

Published
2003
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10. Is methane released from the forest canopy?

Author

Mikkelsen TN, Bruhn D, Ambus P, Larsen KS, Ibrom I, and Pilegaard K

Subjects
Methane, CH4 emission, Forest canopy, Fagus sylvatica L., Forestry, SD1-669.5
Abstract

Laboratory experiments show that rates of CH4 emission from plant material depend exponentially on temperature and linearly on UV irradiance. The UV irradiance shall be spectrally weighted and shorter wavelengths results in higher CH4 emissions. Global upscaling models for estimating aerobic CH4, based on lab results, have be conducted with varying results, but until now field measurements based on profile and eddy covariance measurements have failed to show CH4 emissions from forest canopies. To detect CH4 production or consumption in the canopy of a beech stand we connected a CH4 analyzer to a canopy air profile system that samples air below and above the canopy from seven different heights. A profile system with many vertical sample points can detect gas concentration gradients with a high sensitivity only under conditions with no or little air movements. Under these conditions we found indications of periodic CH4 emissions in the canopy, but more data need to be analyzed before the magnitude of the canopy source of CH4 can be established.

Published
2011
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12. Experimental Design of Multifactor Climate Change Experiments with Elevated CO₂, Warming and Drought: The CLIMAITE Project

Author

Mikkelsen, T. N., Beier, C., Jonasson, S., Holmstrup, M., Schmidt, I. K., Ambus, P., Pilegaard, K., Michelsen, A., Albert, K., Andresen, L. C., Arndal, M. F., Bruun, N., Christensen, S., Danbæk, S., Gundersen, P., Jørgensen, P., Linden, L. G., Kongstad, J., Maraldo, K., Priemé, A., Riis-Nielsen, T., Ro-Poulsen, H., Stevnbak, K., Selsted, M. B., Sørensen, P., Larsen, K. S., Carter, M. S., Ibrom, A., Martinussen, T., Miglietta, F., and Sverdrup, H.

Published
2008
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13. The need for European harmonization of Nutrivigilance in a public health perspective: a comprehensive review.

Author

Vo Van Regnault, G., Costa, M. C., Adanić Pajić, A., Bico, A. P., Bischofova, S., Blaznik, U., Menniti-Ippolito, F., Pilegaard, K., Rodrigues, C., and Margaritis, I.

Abstract

According to the European Union regulation, some countries have established a pre-market notification system for food supplements while others have not. As this regulation is unfulfilled, a notified and marketed food supplement ingredient in one country may be forbidden in another. Even though food supplements shall not be placed on the market if unsafe, some products may still expose the consumers to risks. The risk is increased by easier access due to worldwide dissemination fostered by the internet and free movement of goods in the European Union. The Rapid Alert System for Food and Feed and the Emerging Risks Exchange Network are described. To date, the European Union legislation does not include a provision to establish a dedicated vigilance system for food supplements (Nutrivigilance). Six European Union countries have nevertheless set up national systems, which are presented. The present lack of European Union data collection harmonization, does not allow easy cooperation between countries. This article advocates for creating a coordinated European Nutrivigilance System to detect and scrutinize adverse effects of food supplements. This, to help in directing science-based risk assessments and reinforce the science-based decision of policy makers to improve public health safety. [ABSTRACT FROM AUTHOR]

Published
2022
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18. The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data (vol 7, 225, 2020)

Author

Pastorello, G, Trotta, C, Canfora, E, Chu, H, Christianson, D, Cheah, Y-W, Poindexter, C, Chen, J, Elbashandy, A, Humphrey, M, Isaac, P, Polidori, D, Reichstein, M, Ribeca, A, van Ingen, C, Vuichard, N, Zhang, L, Amiro, B, Ammann, C, Arain, MA, Ardo, J, Arkebauer, T, Arndt, SK, Arriga, N, Aubinet, M, Aurela, M, Baldocchi, D, Barr, A, Beamesderfer, E, Marchesini, LB, Bergeron, O, Beringer, J, Bernhofer, C, Berveiller, D, Billesbach, D, Black, TA, Blanken, PD, Bohrer, G, Boike, J, Bolstad, PV, Bonal, D, Bonnefond, J-M, Bowling, DR, Bracho, R, Brodeur, J, Brummer, C, Buchmann, N, Burban, B, Burns, SP, Buysse, P, Cale, P, Cavagna, M, Cellier, P, Chen, S, Chini, I, Christensen, TR, Cleverly, J, Collalti, A, Consalvo, C, Cook, BD, Cook, D, Coursolle, C, Cremonese, E, Curtis, PS, D'Andrea, E, da Rocha, H, Dai, X, Davis, KJ, De Cinti, B, de Grandcourt, A, De Ligne, A, De Oliveira, RC, Delpierre, N, Desai, AR, Di Bella, CM, di Tommasi, P, Dolman, H, Domingo, F, Dong, G, Dore, S, Duce, P, Dufrene, E, Dunn, A, Dusek, J, Eamus, D, Eichelmann, U, ElKhidir, HAM, Eugster, W, Ewenz, CM, Ewers, B, Famulari, D, Fares, S, Feigenwinter, I, Feitz, A, Fensholt, R, Filippa, G, Fischer, M, Frank, J, Galvagno, M, Gharun, M, Gianelle, D, Gielen, B, Gioli, B, Gitelson, A, Goded, I, Goeckede, M, Goldstein, AH, Gough, CM, Goulden, ML, Graf, A, Griebel, A, Gruening, C, Grunwald, T, Hammerle, A, Han, S, Han, X, Hansen, BU, Hanson, C, Hatakka, J, He, Y, Hehn, M, Heinesch, B, Hinko-Najera, N, Hortnagl, L, Hutley, L, Ibrom, A, Ikawa, H, Jackowicz-Korczynski, M, Janous, D, Jans, W, Jassal, R, Jiang, S, Kato, T, Khomik, M, Klatt, J, Knohl, A, Knox, S, Kobayashi, H, Koerber, G, Kolle, O, Kosugi, Y, Kotani, A, Kowalski, A, Kruijt, B, Kurbatova, J, Kutsch, WL, Kwon, H, Launiainen, S, Laurila, T, Law, B, Leuning, R, Li, Y, Liddell, M, Limousin, J-M, Lion, M, Liska, AJ, Lohila, A, Lopez-Ballesteros, A, Lopez-Blanco, E, Loubet, B, Loustau, D, Lucas-Moffat, A, Luers, J, Ma, S, Macfarlane, C, Magliulo, V, Maier, R, Mammarella, I, Manca, G, Marcolla, B, Margolis, HA, Marras, S, Massman, W, Mastepanov, M, Matamala, R, Matthes, JH, Mazzenga, F, McCaughey, H, McHugh, I, McMillan, AMS, Merbold, L, Meyer, W, Meyers, T, Miller, SD, Minerbi, S, Moderow, U, Monson, RK, Montagnani, L, Moore, CE, Moors, E, Moreaux, V, Moureaux, C, Munger, JW, Nakai, T, Neirynck, J, Nesic, Z, Nicolini, G, Noormets, A, Northwood, M, Nosetto, M, Nouvellon, Y, Novick, K, Oechel, W, Olesen, JE, Ourcival, J-M, Papuga, SA, Parmentier, F-J, Paul-Limoges, E, Pavelka, M, Peichl, M, Pendall, E, Phillips, RP, Pilegaard, K, Pirk, N, Posse, G, Powell, T, Prasse, H, Prober, SM, Rambal, S, Rannik, U, Raz-Yaseef, N, Rebmann, C, Reed, D, de Dios, VR, Restrepo-Coupe, N, Reverter, BR, Roland, M, Sabbatini, S, Sachs, T, Saleska, SR, Sanchez-Canete, EP, Sanchez-Mejia, ZM, Schmid, HP, Schmidt, M, Schneider, K, Schrader, F, Schroder, I, Scott, RL, Sedlak, P, Serrano-Ortiz, P, Shao, C, Shi, P, Shironya, I, Siebicke, L, Sigut, L, Silberstein, R, Sirca, C, Spano, D, Steinbrecher, R, Stevens, RM, Sturtevant, C, Suyker, A, Tagesson, T, Takanashi, S, Tang, Y, Tapper, N, Thom, J, Tomassucci, M, Tuovinen, J-P, Urbanski, S, Valentini, R, van der Molen, M, van Gorsel, E, van Huissteden, K, Varlagin, A, Verfaillie, J, Vesala, T, Vincke, C, Vitale, D, Vygodskaya, N, Walker, JP, Walter-Shea, E, Wang, H, Weber, R, Westermann, S, Wille, C, Wofsy, S, Wohlfahrt, G, Wolf, S, Woodgate, W, Zampedri, R, Zhang, J, Zhou, G, Zona, D, Agarwal, D, Biraud, S, Torn, M, Papale, D, Pastorello, G, Trotta, C, Canfora, E, Chu, H, Christianson, D, Cheah, Y-W, Poindexter, C, Chen, J, Elbashandy, A, Humphrey, M, Isaac, P, Polidori, D, Reichstein, M, Ribeca, A, van Ingen, C, Vuichard, N, Zhang, L, Amiro, B, Ammann, C, Arain, MA, Ardo, J, Arkebauer, T, Arndt, SK, Arriga, N, Aubinet, M, Aurela, M, Baldocchi, D, Barr, A, Beamesderfer, E, Marchesini, LB, Bergeron, O, Beringer, J, Bernhofer, C, Berveiller, D, Billesbach, D, Black, TA, Blanken, PD, Bohrer, G, Boike, J, Bolstad, PV, Bonal, D, Bonnefond, J-M, Bowling, DR, Bracho, R, Brodeur, J, Brummer, C, Buchmann, N, Burban, B, Burns, SP, Buysse, P, Cale, P, Cavagna, M, Cellier, P, Chen, S, Chini, I, Christensen, TR, Cleverly, J, Collalti, A, Consalvo, C, Cook, BD, Cook, D, Coursolle, C, Cremonese, E, Curtis, PS, D'Andrea, E, da Rocha, H, Dai, X, Davis, KJ, De Cinti, B, de Grandcourt, A, De Ligne, A, De Oliveira, RC, Delpierre, N, Desai, AR, Di Bella, CM, di Tommasi, P, Dolman, H, Domingo, F, Dong, G, Dore, S, Duce, P, Dufrene, E, Dunn, A, Dusek, J, Eamus, D, Eichelmann, U, ElKhidir, HAM, Eugster, W, Ewenz, CM, Ewers, B, Famulari, D, Fares, S, Feigenwinter, I, Feitz, A, Fensholt, R, Filippa, G, Fischer, M, Frank, J, Galvagno, M, Gharun, M, Gianelle, D, Gielen, B, Gioli, B, Gitelson, A, Goded, I, Goeckede, M, Goldstein, AH, Gough, CM, Goulden, ML, Graf, A, Griebel, A, Gruening, C, Grunwald, T, Hammerle, A, Han, S, Han, X, Hansen, BU, Hanson, C, Hatakka, J, He, Y, Hehn, M, Heinesch, B, Hinko-Najera, N, Hortnagl, L, Hutley, L, Ibrom, A, Ikawa, H, Jackowicz-Korczynski, M, Janous, D, Jans, W, Jassal, R, Jiang, S, Kato, T, Khomik, M, Klatt, J, Knohl, A, Knox, S, Kobayashi, H, Koerber, G, Kolle, O, Kosugi, Y, Kotani, A, Kowalski, A, Kruijt, B, Kurbatova, J, Kutsch, WL, Kwon, H, Launiainen, S, Laurila, T, Law, B, Leuning, R, Li, Y, Liddell, M, Limousin, J-M, Lion, M, Liska, AJ, Lohila, A, Lopez-Ballesteros, A, Lopez-Blanco, E, Loubet, B, Loustau, D, Lucas-Moffat, A, Luers, J, Ma, S, Macfarlane, C, Magliulo, V, Maier, R, Mammarella, I, Manca, G, Marcolla, B, Margolis, HA, Marras, S, Massman, W, Mastepanov, M, Matamala, R, Matthes, JH, Mazzenga, F, McCaughey, H, McHugh, I, McMillan, AMS, Merbold, L, Meyer, W, Meyers, T, Miller, SD, Minerbi, S, Moderow, U, Monson, RK, Montagnani, L, Moore, CE, Moors, E, Moreaux, V, Moureaux, C, Munger, JW, Nakai, T, Neirynck, J, Nesic, Z, Nicolini, G, Noormets, A, Northwood, M, Nosetto, M, Nouvellon, Y, Novick, K, Oechel, W, Olesen, JE, Ourcival, J-M, Papuga, SA, Parmentier, F-J, Paul-Limoges, E, Pavelka, M, Peichl, M, Pendall, E, Phillips, RP, Pilegaard, K, Pirk, N, Posse, G, Powell, T, Prasse, H, Prober, SM, Rambal, S, Rannik, U, Raz-Yaseef, N, Rebmann, C, Reed, D, de Dios, VR, Restrepo-Coupe, N, Reverter, BR, Roland, M, Sabbatini, S, Sachs, T, Saleska, SR, Sanchez-Canete, EP, Sanchez-Mejia, ZM, Schmid, HP, Schmidt, M, Schneider, K, Schrader, F, Schroder, I, Scott, RL, Sedlak, P, Serrano-Ortiz, P, Shao, C, Shi, P, Shironya, I, Siebicke, L, Sigut, L, Silberstein, R, Sirca, C, Spano, D, Steinbrecher, R, Stevens, RM, Sturtevant, C, Suyker, A, Tagesson, T, Takanashi, S, Tang, Y, Tapper, N, Thom, J, Tomassucci, M, Tuovinen, J-P, Urbanski, S, Valentini, R, van der Molen, M, van Gorsel, E, van Huissteden, K, Varlagin, A, Verfaillie, J, Vesala, T, Vincke, C, Vitale, D, Vygodskaya, N, Walker, JP, Walter-Shea, E, Wang, H, Weber, R, Westermann, S, Wille, C, Wofsy, S, Wohlfahrt, G, Wolf, S, Woodgate, W, Zampedri, R, Zhang, J, Zhou, G, Zona, D, Agarwal, D, Biraud, S, Torn, M, and Papale, D

Abstract

A Correction to this paper has been published: https://doi.org/10.1038/s41597-021-00851-9.

Published
2021

19. The Integrated Carbon Observation System in Europe

Author

Heiskanen, J., Brümmer, C., Buchmann, N., Calfapietra, C., Chen, H., Gielen, B., Gkritzalis, T., Hammer, S., Hartman, S., Herbst, M., Janssens, I.A., Jordan, A., Juurola, E., Karstens, U., Kasurinen, V., Kruijt, B., Lankreijer, H., Levin, I., Linderson, M.-L., Loustau, D., Merbold, L., Lund Myhre, C., Papale, D., Pavelka, M., Pilegaard, K., Ramonet, M., Rebmann, Corinna, Rinne, J., Rivier, L., Saltikoff, E., Sanders, R., Steinbacher, M., Steinhoff, T., Watson, A., Vermeulen, A.T., Vesala, T., Vítková, G., Kutsch, W., Heiskanen, J., Brümmer, C., Buchmann, N., Calfapietra, C., Chen, H., Gielen, B., Gkritzalis, T., Hammer, S., Hartman, S., Herbst, M., Janssens, I.A., Jordan, A., Juurola, E., Karstens, U., Kasurinen, V., Kruijt, B., Lankreijer, H., Levin, I., Linderson, M.-L., Loustau, D., Merbold, L., Lund Myhre, C., Papale, D., Pavelka, M., Pilegaard, K., Ramonet, M., Rebmann, Corinna, Rinne, J., Rivier, L., Saltikoff, E., Sanders, R., Steinbacher, M., Steinhoff, T., Watson, A., Vermeulen, A.T., Vesala, T., Vítková, G., and Kutsch, W.

Abstract

Since 1750, land use change and fossil fuel combustion has led to a 46 % increase in the atmospheric carbon dioxide (CO2) concentrations, causing global warming with substantial societal consequences. The Paris Agreement aims to limiting global temperature increases to well below 2°C above pre-industrial levels. Increasing levels of CO2 and other greenhouse gases (GHGs), such as methane (CH4) and nitrous oxide (N2O), in the atmosphere are the primary cause of climate change. Approximately half of the carbon emissions to the atmosphere is sequestered by ocean and land sinks, leading to ocean acidification but also slowing the rate of global warming. However, there are significant uncertainties in the future global warming scenarios due to uncertainties in the size, nature and stability of these sinks. Quantifying and monitoring the size and timing of natural sinks and the impact of climate change on ecosystems are important information to guide policy-makers’ decisions and strategies on reductions in emissions. Continuous, long-term observations are required to quantify GHG emissions, sinks, and their impacts on Earth systems. The Integrated Carbon Observation System (ICOS) was designed as the European in situ observation and information system to support science and society in their efforts to mitigate climate change. It provides standardized and open data currently from over 140 measurement stations across 12 European countries. The stations observe GHG concentrations in the atmosphere and carbon and GHG fluxes between the atmosphere, land surface and the oceans. This article describes how ICOS fulfills its mission to harmonize these observations, ensure the related long-term financial commitments, provide easy access to well-documented and reproducible high-quality data and related protocols and tools for scientific studies, and deliver information and GHG-related products to stakeholders in society and policy.

Published
2021

20. Author Correction: The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data

Author

Pastorello, G, Trotta, C, Canfora, E, Chu, H, Christianson, D, Cheah, Y-W, Poindexter, C, Chen, J, Elbashandy, A, Humphrey, M, Isaac, P, Polidori, D, Reichstein, M, Ribeca, A, van Ingen, C, Vuichard, N, Zhang, L, Amiro, B, Ammann, C, Arain, MA, Ardö, J, Arkebauer, T, Arndt, SK, Arriga, N, Aubinet, M, Aurela, M, Baldocchi, D, Barr, A, Beamesderfer, E, Marchesini, LB, Bergeron, O, Beringer, J, Bernhofer, C, Berveiller, D, Billesbach, D, Black, TA, Blanken, PD, Bohrer, G, Boike, J, Bolstad, PV, Bonal, D, Bonnefond, J-M, Bowling, DR, Bracho, R, Brodeur, J, Brümmer, C, Buchmann, N, Burban, B, Burns, SP, Buysse, P, Cale, P, Cavagna, M, Cellier, P, Chen, S, Chini, I, Christensen, TR, Cleverly, J, Collalti, A, Consalvo, C, Cook, BD, Cook, D, Coursolle, C, Cremonese, E, Curtis, PS, D’Andrea, E, da Rocha, H, Dai, X, Davis, KJ, De Cinti, B, de Grandcourt, A, De Ligne, A, De Oliveira, RC, Delpierre, N, Desai, AR, Di Bella, CM, di Tommasi, P, Dolman, H, Domingo, F, Dong, G, Dore, S, Duce, P, Dufrêne, E, Dunn, A, Dušek, J, Eamus, D, Eichelmann, U, ElKhidir, HAM, Eugster, W, Ewenz, CM, Ewers, B, Famulari, D, Fares, S, Feigenwinter, I, Feitz, A, Fensholt, R, Filippa, G, Fischer, M, Frank, J, Galvagno, M, Gharun, M, Gianelle, D, Gielen, B, Gioli, B, Gitelson, A, Goded, I, Goeckede, M, Goldstein, AH, Gough, CM, Goulden, ML, Graf, A, Griebel, A, Gruening, C, Grünwald, T, Hammerle, A, Han, S, Han, X, Hansen, BU, Hanson, C, Hatakka, J, He, Y, Hehn, M, Heinesch, B, Hinko-Najera, N, Hörtnagl, L, Hutley, L, Ibrom, A, Ikawa, H, Jackowicz-Korczynski, M, Janouš, D, Jans, W, Jassal, R, Jiang, S, Kato, T, Khomik, M, Klatt, J, Knohl, A, Knox, S, Kobayashi, H, Koerber, G, Kolle, O, Kosugi, Y, Kotani, A, Kowalski, A, Kruijt, B, Kurbatova, J, Kutsch, WL, Kwon, H, Launiainen, S, Laurila, T, Law, B, Leuning, R, Li, Y, Liddell, M, Limousin, J-M, Lion, M, Liska, AJ, Lohila, A, López-Ballesteros, A, López-Blanco, E, Loubet, B, Loustau, D, Lucas-Moffat, A, Lüers, J, Ma, S, Macfarlane, C, Magliulo, V, Maier, R, Mammarella, I, Manca, G, Marcolla, B, Margolis, HA, Marras, S, Massman, W, Mastepanov, M, Matamala, R, Matthes, JH, Mazzenga, F, McCaughey, H, McHugh, I, McMillan, AMS, Merbold, L, Meyer, W, Meyers, T, Miller, SD, Minerbi, S, Moderow, U, Monson, RK, Montagnani, L, Moore, CE, Moors, E, Moreaux, V, Moureaux, C, Munger, JW, Nakai, T, Neirynck, J, Nesic, Z, Nicolini, G, Noormets, A, Northwood, M, Nosetto, M, Nouvellon, Y, Novick, K, Oechel, W, Olesen, JE, Ourcival, J-M, Papuga, SA, Parmentier, F-J, Paul-Limoges, E, Pavelka, M, Peichl, M, Pendall, E, Phillips, RP, Pilegaard, K, Pirk, N, Posse, G, Powell, T, Prasse, H, Prober, SM, Rambal, S, Rannik, Ü, Raz-Yaseef, N, Rebmann, C, Reed, D, de Dios, VR, Restrepo-Coupe, N, Reverter, BR, Roland, M, Sabbatini, S, Sachs, T, Saleska, SR, Sánchez-Cañete, EP, Sanchez-Mejia, ZM, Schmid, HP, Schmidt, M, Schneider, K, Schrader, F, Schroder, I, Scott, RL, Sedlák, P, Serrano-Ortíz, P, Shao, C, Shi, P, Shironya, I, Siebicke, L, Šigut, L, Silberstein, R, Sirca, C, Spano, D, Steinbrecher, R, Stevens, RM, Sturtevant, C, Suyker, A, Tagesson, T, Takanashi, S, Tang, Y, Tapper, N, Thom, J, Tomassucci, M, Tuovinen, J-P, Urbanski, S, Valentini, R, van der Molen, M, van Gorsel, E, van Huissteden, K, Varlagin, A, Verfaillie, J, Vesala, T, Vincke, C, Vitale, D, Vygodskaya, N, Walker, JP, Walter-Shea, E, Wang, H, Weber, R, Westermann, S, Wille, C, Wofsy, S, Wohlfahrt, G, Wolf, S, Woodgate, W, Zampedri, R, Zhang, J, Zhou, G, Zona, D, Agarwal, D, Biraud, S, Torn, M, Papale, D, Pastorello, G, Trotta, C, Canfora, E, Chu, H, Christianson, D, Cheah, Y-W, Poindexter, C, Chen, J, Elbashandy, A, Humphrey, M, Isaac, P, Polidori, D, Reichstein, M, Ribeca, A, van Ingen, C, Vuichard, N, Zhang, L, Amiro, B, Ammann, C, Arain, MA, Ardö, J, Arkebauer, T, Arndt, SK, Arriga, N, Aubinet, M, Aurela, M, Baldocchi, D, Barr, A, Beamesderfer, E, Marchesini, LB, Bergeron, O, Beringer, J, Bernhofer, C, Berveiller, D, Billesbach, D, Black, TA, Blanken, PD, Bohrer, G, Boike, J, Bolstad, PV, Bonal, D, Bonnefond, J-M, Bowling, DR, Bracho, R, Brodeur, J, Brümmer, C, Buchmann, N, Burban, B, Burns, SP, Buysse, P, Cale, P, Cavagna, M, Cellier, P, Chen, S, Chini, I, Christensen, TR, Cleverly, J, Collalti, A, Consalvo, C, Cook, BD, Cook, D, Coursolle, C, Cremonese, E, Curtis, PS, D’Andrea, E, da Rocha, H, Dai, X, Davis, KJ, De Cinti, B, de Grandcourt, A, De Ligne, A, De Oliveira, RC, Delpierre, N, Desai, AR, Di Bella, CM, di Tommasi, P, Dolman, H, Domingo, F, Dong, G, Dore, S, Duce, P, Dufrêne, E, Dunn, A, Dušek, J, Eamus, D, Eichelmann, U, ElKhidir, HAM, Eugster, W, Ewenz, CM, Ewers, B, Famulari, D, Fares, S, Feigenwinter, I, Feitz, A, Fensholt, R, Filippa, G, Fischer, M, Frank, J, Galvagno, M, Gharun, M, Gianelle, D, Gielen, B, Gioli, B, Gitelson, A, Goded, I, Goeckede, M, Goldstein, AH, Gough, CM, Goulden, ML, Graf, A, Griebel, A, Gruening, C, Grünwald, T, Hammerle, A, Han, S, Han, X, Hansen, BU, Hanson, C, Hatakka, J, He, Y, Hehn, M, Heinesch, B, Hinko-Najera, N, Hörtnagl, L, Hutley, L, Ibrom, A, Ikawa, H, Jackowicz-Korczynski, M, Janouš, D, Jans, W, Jassal, R, Jiang, S, Kato, T, Khomik, M, Klatt, J, Knohl, A, Knox, S, Kobayashi, H, Koerber, G, Kolle, O, Kosugi, Y, Kotani, A, Kowalski, A, Kruijt, B, Kurbatova, J, Kutsch, WL, Kwon, H, Launiainen, S, Laurila, T, Law, B, Leuning, R, Li, Y, Liddell, M, Limousin, J-M, Lion, M, Liska, AJ, Lohila, A, López-Ballesteros, A, López-Blanco, E, Loubet, B, Loustau, D, Lucas-Moffat, A, Lüers, J, Ma, S, Macfarlane, C, Magliulo, V, Maier, R, Mammarella, I, Manca, G, Marcolla, B, Margolis, HA, Marras, S, Massman, W, Mastepanov, M, Matamala, R, Matthes, JH, Mazzenga, F, McCaughey, H, McHugh, I, McMillan, AMS, Merbold, L, Meyer, W, Meyers, T, Miller, SD, Minerbi, S, Moderow, U, Monson, RK, Montagnani, L, Moore, CE, Moors, E, Moreaux, V, Moureaux, C, Munger, JW, Nakai, T, Neirynck, J, Nesic, Z, Nicolini, G, Noormets, A, Northwood, M, Nosetto, M, Nouvellon, Y, Novick, K, Oechel, W, Olesen, JE, Ourcival, J-M, Papuga, SA, Parmentier, F-J, Paul-Limoges, E, Pavelka, M, Peichl, M, Pendall, E, Phillips, RP, Pilegaard, K, Pirk, N, Posse, G, Powell, T, Prasse, H, Prober, SM, Rambal, S, Rannik, Ü, Raz-Yaseef, N, Rebmann, C, Reed, D, de Dios, VR, Restrepo-Coupe, N, Reverter, BR, Roland, M, Sabbatini, S, Sachs, T, Saleska, SR, Sánchez-Cañete, EP, Sanchez-Mejia, ZM, Schmid, HP, Schmidt, M, Schneider, K, Schrader, F, Schroder, I, Scott, RL, Sedlák, P, Serrano-Ortíz, P, Shao, C, Shi, P, Shironya, I, Siebicke, L, Šigut, L, Silberstein, R, Sirca, C, Spano, D, Steinbrecher, R, Stevens, RM, Sturtevant, C, Suyker, A, Tagesson, T, Takanashi, S, Tang, Y, Tapper, N, Thom, J, Tomassucci, M, Tuovinen, J-P, Urbanski, S, Valentini, R, van der Molen, M, van Gorsel, E, van Huissteden, K, Varlagin, A, Verfaillie, J, Vesala, T, Vincke, C, Vitale, D, Vygodskaya, N, Walker, JP, Walter-Shea, E, Wang, H, Weber, R, Westermann, S, Wille, C, Wofsy, S, Wohlfahrt, G, Wolf, S, Woodgate, W, Zampedri, R, Zhang, J, Zhou, G, Zona, D, Agarwal, D, Biraud, S, Torn, M, and Papale, D

Abstract

The following authors were omitted from the original version of this Data Descriptor: Markus Reichstein and Nicolas Vuichard. Both contributed to the code development and N. Vuichard contributed to the processing of the ERA-Interim data downscaling. Furthermore, the contribution of the co-author Frank Tiedemann was re-evaluated relative to the colleague Corinna Rebmann, both working at the same sites, and based on this re-evaluation a substitution in the co-author list is implemented (with Rebmann replacing Tiedemann). Finally, two affiliations were listed incorrectly and are corrected here (entries 190 and 193). The author list and affiliations have been amended to address these omissions in both the HTML and PDF versions.

Published
2021

21. Information on plant foods in eBASIS: what is in a correct botanical scientific name?

Author

Pilegaard, K., Eriksen, F.D., Soerensen, M., and Gry, J.

Subjects
Plants -- Composition -- Nutritional aspects -- Analysis -- Usage, Food industry -- Standards -- Information management, Databases -- Usage -- Analysis -- Standards, Food -- Composition -- Nutritional aspects -- Standards -- Usage, Company systems management, CD-ROM catalog, Food and beverage production/distribution software, Database, CD-ROM database, Food/cooking/nutrition, Health
Abstract

This paper presents the plant information included in the eBASIS (BioActive Substances in Foods Information System) database on composition and biological activity of selected bioactive compounds from European plant/mushroom foods with putative beneficial and/or toxic effects. The European Food Information Resource (EuroFIR)-NETTOX Plant List (2007) presents scientific and vernacular names in 15 European languages for around 325 major European plant/mushroom foods and also for different parts of these foods. This list and its predecessor, the NETTOX List of Food Plants, have been used by national food authorities and within the European Union for consideration of plants and mushrooms that have been used to a significant degree up to 1997 and are therefore not covered by the novel food regulation (European Parliament and Council of the European Union, 1997). The species and the plant part studied are insufficiently characterised in many scientific papers. This paper informs about the naming of plants and mushrooms as an aid for scientists who are not botanists or mycologists themselves. Knowledge on scientific names used, including synonyms, may also be important for finding all relevant papers when searching the literature. In many cases, vernacular/trivial names in, for example, English do not uniquely identify the species. Finally, recommendations are given to assist researchers and reviewers of papers dealing with botanical/mycological information. European journal of Clinical Nutrition (2010) 64, S108-S111; doi: 10.1038/ejcn.2010.220 Keywords: plant; mushroom; taxonomy; scientific name; database; bioactives, Introduction In recent years, there has been increased research interest in bioactive compounds found in food plants and edible mushrooms, and plants/mushrooms used as ingredients in food supplements. Bioactive compounds [...]

Published
2010
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23. The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data

Author

Pastorello, G, Trotta, C, Canfora, E, Chu, H, Christianson, D, Cheah, Y-W, Poindexter, C, Chen, J, Elbashandy, A, Humphrey, M, Isaac, P, Polidori, D, Ribeca, A, van Ingen, C, Zhang, L, Amiro, B, Ammann, C, Arain, MA, Ardo, J, Arkebauer, T, Arndt, SK, Arriga, N, Aubinet, M, Aurela, M, Baldocchi, D, Barr, A, Beamesderfer, E, Marchesini, LB, Bergeron, O, Beringer, J, Bernhofer, C, Berveiller, D, Billesbach, D, Black, TA, Blanken, PD, Bohrer, G, Boike, J, Bolstad, PV, Bonal, D, Bonnefond, J-M, Bowling, DR, Bracho, R, Brodeur, J, Bruemmer, C, Buchmann, N, Burban, B, Burns, SP, Buysse, P, Cale, P, Cavagna, M, Cellier, P, Chen, S, Chini, I, Christensen, TR, Cleverly, J, Collalti, A, Consalvo, C, Cook, BD, Cook, D, Coursolle, C, Cremonese, E, Curtis, PS, D'Andrea, E, da Rocha, H, Dai, X, Davis, KJ, De Cinti, B, de Grandcourt, A, De Ligne, A, De Oliveira, RC, Delpierre, N, Desai, AR, Di Bella, CM, di Tommasi, P, Dolman, H, Domingo, F, Dong, G, Dore, S, Duce, P, Dufrene, E, Dunn, A, Dusek, J, Eamus, D, Eichelmann, U, ElKhidir, HAM, Eugster, W, Ewenz, CM, Ewers, B, Famulari, D, Fares, S, Feigenwinter, I, Feitz, A, Fensholt, R, Filippa, G, Fischer, M, Frank, J, Galvagno, M, Gharun, M, Gianelle, D, Gielen, B, Gioli, B, Gitelson, A, Goded, I, Goeckede, M, Goldstein, AH, Gough, CM, Goulden, ML, Graf, A, Griebel, A, Gruening, C, Gruenwald, T, Hammerle, A, Han, S, Han, X, Hansen, BU, Hanson, C, Hatakka, J, He, Y, Hehn, M, Heinesch, B, Hinko-Najera, N, Hoertnagl, L, Hutley, L, Ibrom, A, Ikawa, H, Jackowicz-Korczynski, M, Janous, D, Jans, W, Jassal, R, Jiang, S, Kato, T, Khomik, M, Klatt, J, Knohl, A, Knox, S, Kobayashi, H, Koerber, G, Kolle, O, Kosugi, Y, Kotani, A, Kowalski, A, Kruijt, B, Kurbatova, J, Kutsch, WL, Kwon, H, Launiainen, S, Laurila, T, Law, B, Leuning, R, Li, Y, Liddell, M, Limousin, J-M, Lion, M, Liska, AJ, Lohila, A, Lopez-Ballesteros, A, Lopez-Blanco, E, Loubet, B, Loustau, D, Lucas-Moffat, A, Lueers, J, Ma, S, Macfarlane, C, Magliulo, V, Maier, R, Mammarella, I, Manca, G, Marcolla, B, Margolis, HA, Marras, S, Massman, W, Mastepanov, M, Matamala, R, Matthes, JH, Mazzenga, F, McCaughey, H, McHugh, I, McMillan, AMS, Merbold, L, Meyer, W, Meyers, T, Miller, SD, Minerbi, S, Moderow, U, Monson, RK, Montagnani, L, Moore, CE, Moors, E, Moreaux, V, Moureaux, C, Munger, JW, Nakai, T, Neirynck, J, Nesic, Z, Nicolini, G, Noormets, A, Northwood, M, Nosetto, M, Nouvellon, Y, Novick, K, Oechel, W, Olesen, JE, Ourcival, J-M, Papuga, SA, Parmentier, F-J, Paul-Limoges, E, Pavelka, M, Peichl, M, Pendall, E, Phillips, RP, Pilegaard, K, Pirk, N, Posse, G, Powell, T, Prasse, H, Prober, SM, Rambal, S, Rannik, U, Raz-Yaseef, N, Reed, D, de Dios, VR, Restrepo-Coupe, N, Reverter, BR, Roland, M, Sabbatini, S, Sachs, T, Saleska, SR, Sanchez-Canete, EP, Sanchez-Mejia, ZM, Schmid, HP, Schmidt, M, Schneider, K, Schrader, F, Schroder, I, Scott, RL, Sedlak, P, Serrano-Ortiz, P, Shao, C, Shi, P, Shironya, I, Siebicke, L, Sigut, L, Silberstein, R, Sirca, C, Spano, D, Steinbrecher, R, Stevens, RM, Sturtevant, C, Suyker, A, Tagesson, T, Takanashi, S, Tang, Y, Tapper, N, Thom, J, Tiedemann, F, Tomassucci, M, Tuovinen, J-P, Urbanski, S, Valentini, R, van der Molen, M, van Gorsel, E, van Huissteden, K, Varlagin, A, Verfaillie, J, Vesala, T, Vincke, C, Vitale, D, Vygodskaya, N, Walker, JP, Walter-Shea, E, Wang, H, Weber, R, Westermann, S, Wille, C, Wofsy, S, Wohlfahrt, G, Wolf, S, Woodgate, W, Zampedri, R, Zhang, J, Zhou, G, Zona, D, Agarwal, D, Biraud, S, Torn, M, Papale, D, Pastorello, G, Trotta, C, Canfora, E, Chu, H, Christianson, D, Cheah, Y-W, Poindexter, C, Chen, J, Elbashandy, A, Humphrey, M, Isaac, P, Polidori, D, Ribeca, A, van Ingen, C, Zhang, L, Amiro, B, Ammann, C, Arain, MA, Ardo, J, Arkebauer, T, Arndt, SK, Arriga, N, Aubinet, M, Aurela, M, Baldocchi, D, Barr, A, Beamesderfer, E, Marchesini, LB, Bergeron, O, Beringer, J, Bernhofer, C, Berveiller, D, Billesbach, D, Black, TA, Blanken, PD, Bohrer, G, Boike, J, Bolstad, PV, Bonal, D, Bonnefond, J-M, Bowling, DR, Bracho, R, Brodeur, J, Bruemmer, C, Buchmann, N, Burban, B, Burns, SP, Buysse, P, Cale, P, Cavagna, M, Cellier, P, Chen, S, Chini, I, Christensen, TR, Cleverly, J, Collalti, A, Consalvo, C, Cook, BD, Cook, D, Coursolle, C, Cremonese, E, Curtis, PS, D'Andrea, E, da Rocha, H, Dai, X, Davis, KJ, De Cinti, B, de Grandcourt, A, De Ligne, A, De Oliveira, RC, Delpierre, N, Desai, AR, Di Bella, CM, di Tommasi, P, Dolman, H, Domingo, F, Dong, G, Dore, S, Duce, P, Dufrene, E, Dunn, A, Dusek, J, Eamus, D, Eichelmann, U, ElKhidir, HAM, Eugster, W, Ewenz, CM, Ewers, B, Famulari, D, Fares, S, Feigenwinter, I, Feitz, A, Fensholt, R, Filippa, G, Fischer, M, Frank, J, Galvagno, M, Gharun, M, Gianelle, D, Gielen, B, Gioli, B, Gitelson, A, Goded, I, Goeckede, M, Goldstein, AH, Gough, CM, Goulden, ML, Graf, A, Griebel, A, Gruening, C, Gruenwald, T, Hammerle, A, Han, S, Han, X, Hansen, BU, Hanson, C, Hatakka, J, He, Y, Hehn, M, Heinesch, B, Hinko-Najera, N, Hoertnagl, L, Hutley, L, Ibrom, A, Ikawa, H, Jackowicz-Korczynski, M, Janous, D, Jans, W, Jassal, R, Jiang, S, Kato, T, Khomik, M, Klatt, J, Knohl, A, Knox, S, Kobayashi, H, Koerber, G, Kolle, O, Kosugi, Y, Kotani, A, Kowalski, A, Kruijt, B, Kurbatova, J, Kutsch, WL, Kwon, H, Launiainen, S, Laurila, T, Law, B, Leuning, R, Li, Y, Liddell, M, Limousin, J-M, Lion, M, Liska, AJ, Lohila, A, Lopez-Ballesteros, A, Lopez-Blanco, E, Loubet, B, Loustau, D, Lucas-Moffat, A, Lueers, J, Ma, S, Macfarlane, C, Magliulo, V, Maier, R, Mammarella, I, Manca, G, Marcolla, B, Margolis, HA, Marras, S, Massman, W, Mastepanov, M, Matamala, R, Matthes, JH, Mazzenga, F, McCaughey, H, McHugh, I, McMillan, AMS, Merbold, L, Meyer, W, Meyers, T, Miller, SD, Minerbi, S, Moderow, U, Monson, RK, Montagnani, L, Moore, CE, Moors, E, Moreaux, V, Moureaux, C, Munger, JW, Nakai, T, Neirynck, J, Nesic, Z, Nicolini, G, Noormets, A, Northwood, M, Nosetto, M, Nouvellon, Y, Novick, K, Oechel, W, Olesen, JE, Ourcival, J-M, Papuga, SA, Parmentier, F-J, Paul-Limoges, E, Pavelka, M, Peichl, M, Pendall, E, Phillips, RP, Pilegaard, K, Pirk, N, Posse, G, Powell, T, Prasse, H, Prober, SM, Rambal, S, Rannik, U, Raz-Yaseef, N, Reed, D, de Dios, VR, Restrepo-Coupe, N, Reverter, BR, Roland, M, Sabbatini, S, Sachs, T, Saleska, SR, Sanchez-Canete, EP, Sanchez-Mejia, ZM, Schmid, HP, Schmidt, M, Schneider, K, Schrader, F, Schroder, I, Scott, RL, Sedlak, P, Serrano-Ortiz, P, Shao, C, Shi, P, Shironya, I, Siebicke, L, Sigut, L, Silberstein, R, Sirca, C, Spano, D, Steinbrecher, R, Stevens, RM, Sturtevant, C, Suyker, A, Tagesson, T, Takanashi, S, Tang, Y, Tapper, N, Thom, J, Tiedemann, F, Tomassucci, M, Tuovinen, J-P, Urbanski, S, Valentini, R, van der Molen, M, van Gorsel, E, van Huissteden, K, Varlagin, A, Verfaillie, J, Vesala, T, Vincke, C, Vitale, D, Vygodskaya, N, Walker, JP, Walter-Shea, E, Wang, H, Weber, R, Westermann, S, Wille, C, Wofsy, S, Wohlfahrt, G, Wolf, S, Woodgate, W, Zampedri, R, Zhang, J, Zhou, G, Zona, D, Agarwal, D, Biraud, S, Torn, M, and Papale, D

Abstract

The FLUXNET2015 dataset provides ecosystem-scale data on CO2, water, and energy exchange between the biosphere and the atmosphere, and other meteorological and biological measurements, from 212 sites around the globe (over 1500 site-years, up to and including year 2014). These sites, independently managed and operated, voluntarily contributed their data to create global datasets. Data were quality controlled and processed using uniform methods, to improve consistency and intercomparability across sites. The dataset is already being used in a number of applications, including ecophysiology studies, remote sensing studies, and development of ecosystem and Earth system models. FLUXNET2015 includes derived-data products, such as gap-filled time series, ecosystem respiration and photosynthetic uptake estimates, estimation of uncertainties, and metadata about the measurements, presented for the first time in this paper. In addition, 206 of these sites are for the first time distributed under a Creative Commons (CC-BY 4.0) license. This paper details this enhanced dataset and the processing methods, now made available as open-source codes, making the dataset more accessible, transparent, and reproducible.

Published
2020

24. The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data

Author

Pastorello, G. (Gilberto), Trotta, C. (Carlo), Canfora, E. (Eleonora), Chu, H. (Housen), Christianson, D. (Danielle), Cheah, Y.-W. (You-Wei), Poindexter, C. (Cristina), Chen, J. (Jiquan), Elbashandy, A. (Abdelrahman), Humphrey, M. (Marty), Isaac, P. (Peter), Polidori, D. (Diego), Ribeca, A. (Alessio), van Ingen, C. (Catharine), Zhang, L. (Leiming), Amiro, B. (Brian), Ammann, C. (Christof), Arain, M. A. (M. Altaf), Ardo, J. (Jonas), Arkebauer, T. (Timothy), Arndt, S. K. (Stefan K.), Arriga, N. (Nicola), Aubinet, M. (Marc), Aurela, M. (Mika), Baldocchi, D. (Dennis), Barr, A. (Alan), Beamesderfer, E. (Eric), Marchesini, L. B. (Luca Belelli), Bergeron, O. (Onil), Beringer, J. (Jason), Bernhofer, C. (Christian), Berveiller, D. (Daniel), Billesbach, D. (Dave), Black, T. A. (Thomas Andrew), Blanken, P. D. (Peter D.), Bohrer, G. (Gil), Boike, J. (Julia), Bolstad, P. V. (Paul V.), Bonal, D. (Damien), Bonnefond, J.-M. (Jean-Marc), Bowling, D. R. (David R.), Bracho, R. (Rosvel), Brodeur, J. (Jason), Bruemmer, C. (Christian), Buchmann, N. (Nina), Burban, B. (Benoit), Burns, S. P. (Sean P.), Buysse, P. (Pauline), Cale, P. (Peter), Cavagna, M. (Mauro), Cellier, P. (Pierre), Chen, S. (Shiping), Chini, I. (Isaac), Christensen, T. R. (Torben R.), Cleverly, J. (James), Collalti, A. (Alessio), Consalvo, C. (Claudia), Cook, B. D. (Bruce D.), Cook, D. (David), Coursolle, C. (Carole), Cremonese, E. (Edoardo), Curtis, P. S. (Peter S.), D'Andrea, E. (Ettore), da Rocha, H. (Humberto), Dai, X. (Xiaoqin), Davis, K. J. (Kenneth J.), De Cinti, B. (Bruno), de Grandcourt, A. (Agnes), De Ligne, A. (Anne), De Oliveira, R. C. (Raimundo C.), Delpierre, N. (Nicolas), Desai, A. R. (Ankur R.), Di Bella, C. M. (Carlos Marcelo), di Tommasi, P. (Paul), Dolman, H. (Han), Domingo, F. (Francisco), Dong, G. (Gang), Dore, S. (Sabina), Duce, P. (Pierpaolo), Dufrene, E. (Eric), Dunn, A. (Allison), Dusek, J. (Jiri), Eamus, D. (Derek), Eichelmann, U. (Uwe), ElKhidir, H. A. (Hatim Abdalla M.), Eugster, W. (Werner), Ewenz, C. M. (Cacilia M.), Ewers, B. (Brent), Famulari, D. (Daniela), Fares, S. (Silvano), Feigenwinter, I. (Iris), Feitz, A. (Andrew), Fensholt, R. (Rasmus), Filippa, G. (Gianluca), Fischer, M. (Marc), Frank, J. (John), Galvagno, M. (Marta), Gharun, M. (Mana), Gianelle, D. (Damiano), Gielen, B. (Bert), Gioli, B. (Beniamino), Gitelson, A. (Anatoly), Goded, I. (Ignacio), Goeckede, M. (Mathias), Goldstein, A. H. (Allen H.), Gough, C. M. (Christopher M.), Goulden, M. L. (Michael L.), Graf, A. (Alexander), Griebel, A. (Anne), Gruening, C. (Carsten), Gruenwald, T. (Thomas), Hammerle, A. (Albin), Han, S. (Shijie), Han, X. (Xingguo), Hansen, B. U. (Birger Ulf), Hanson, C. (Chad), Hatakka, J. (Juha), He, Y. (Yongtao), Hehn, M. (Markus), Heinesch, B. (Bernard), Hinko-Najera, N. (Nina), Hoertnagl, L. (Lukas), Hutley, L. (Lindsay), Ibrom, A. (Andreas), Ikawa, H. (Hiroki), Jackowicz-Korczynski, M. (Marcin), Janous, D. (Dalibor), Jans, W. (Wilma), Jassal, R. (Rachhpal), Jiang, S. (Shicheng), Kato, T. (Tomomichi), Khomik, M. (Myroslava), Klatt, J. (Janina), Knohl, A. (Alexander), Knox, S. (Sara), Kobayashi, H. (Hideki), Koerber, G. (Georgia), Kolle, O. (Olaf), Kosugi, Y. (Yoshiko), Kotani, A. (Ayumi), Kowalski, A. (Andrew), Kruijt, B. (Bart), Kurbatova, J. (Julia), Kutsch, W. L. (Werner L.), Kwon, H. (Hyojung), Launiainen, S. (Samuli), Laurila, T. (Tuomas), Law, B. (Bev), Leuning, R. (Ray), Li, Y. (Yingnian), Liddell, M. (Michael), Limousin, J.-M. (Jean-Marc), Lion, M. (Marryanna), Liska, A. J. (Adam J.), Lohila, A. (Annalea), Lopez-Ballesteros, A. (Ana), Lopez-Blanco, E. (Efren), Loubet, B. (Benjamin), Loustau, D. (Denis), Lucas-Moffat, A. (Antje), Lueers, J. (Johannes), Ma, S. (Siyan), Macfarlane, C. (Craig), Magliulo, V. (Vincenzo), Maier, R. (Regine), Mammarella, I. (Ivan), Manca, G. (Giovanni), Marcolla, B. (Barbara), Margolis, H. A. (Hank A.), Marras, S. (Serena), Massman, W. (William), Mastepanov, M. (Mikhail), Matamala, R. (Roser), Matthes, J. H. (Jaclyn Hatala), Mazzenga, F. (Francesco), McCaughey, H. (Harry), McHugh, I. (Ian), McMillan, A. M. (Andrew M. S.), Merbold, L. (Lutz), Meyer, W. (Wayne), Meyers, T. (Tilden), Miller, S. D. (Scott D.), Minerbi, S. (Stefano), Moderow, U. (Uta), Monson, R. K. (Russell K.), Montagnani, L. (Leonardo), Moore, C. E. (Caitlin E.), Moors, E. (Eddy), Moreaux, V. (Virginie), Moureaux, C. (Christine), Munger, J. W. (J. William), Nakai, T. (Taro), Neirynck, J. (Johan), Nesic, Z. (Zoran), Nicolini, G. (Giacomo), Noormets, A. (Asko), Northwood, M. (Matthew), Nosetto, M. (Marcelo), Nouvellon, Y. (Yann), Novick, K. (Kimberly), Oechel, W. (Walter), Olesen, J. E. (Jorgen Eivind), Ourcival, J.-M. (Jean-Marc), Papuga, S. A. (Shirley A.), Parmentier, F.-J. (Frans-Jan), Paul-Limoges, E. (Eugenie), Pavelka, M. (Marian), Peichl, M. (Matthias), Pendall, E. (Elise), Phillips, R. P. (Richard P.), Pilegaard, K. (Kim), Pirk, N. (Norbert), Posse, G. (Gabriela), Powell, T. (Thomas), Prasse, H. (Heiko), Prober, S. M. (Suzanne M.), Rambal, S. (Serge), Rannik, U. (Ullar), Raz-Yaseef, N. (Naama), Reed, D. (David), de Dios, V. R. (Victor Resco), Restrepo-Coupe, N. (Natalia), Reverter, B. R. (Borja R.), Roland, M. (Marilyn), Sabbatini, S. (Simone), Sachs, T. (Torsten), Saleska, S. R. (Scott R.), Sanchez-Canete, E. P. (Enrique P.), Sanchez-Mejia, Z. M. (Zulia M.), Schmid, H. P. (Hans Peter), Schmidt, M. (Marius), Schneider, K. (Karl), Schrader, F. (Frederik), Schroder, I. (Ivan), Scott, R. L. (Russell L.), Sedlak, P. (Pavel), Serrano-Ortiz, P. (Penelope), Shao, C. (Changliang), Shi, P. (Peili), Shironya, I. (Ivan), Siebicke, L. (Lukas), Sigut, L. (Ladislav), Silberstein, R. (Richard), Sirca, C. (Costantino), Spano, D. (Donatella), Steinbrecher, R. (Rainer), Stevens, R. M. (Robert M.), Sturtevant, C. (Cove), Suyker, A. (Andy), Tagesson, T. (Torbern), Takanashi, S. (Satoru), Tang, Y. (Yanhong), Tapper, N. (Nigel), Thom, J. (Jonathan), Tiedemann, F. (Frank), Tomassucci, M. (Michele), Tuovinen, J.-P. (Juha-Pekka), Urbanski, S. (Shawn), Valentini, R. (Riccardo), van der Molen, M. (Michiel), van Gorsel, E. (Eva), van Huissteden, K. (Ko), Varlagin, A. (Andrej), Verfaillie, J. (Joseph), Vesala, T. (Timo), Vincke, C. (Caroline), Vitale, D. (Domenico), Vygodskaya, N. (Natalia), Walker, J. P. (Jeffrey P.), Walter-Shea, E. (Elizabeth), Wang, H. (Huimin), Weber, R. (Robin), Westermann, S. (Sebastian), Wille, C. (Christian), Wofsy, S. (Steven), Wohlfahrt, G. (Georg), Wolf, S. (Sebastian), Woodgate, W. (William), Li, Y. (Yuelin), Zampedri, R. (Roberto), Zhang, J. (Junhui), Zhou, G. (Guoyi), Zona, D. (Donatella), Agarwal, D. (Deb), Biraud, S. (Sebastien), Torn, M. (Margaret), Papale, D. (Dario), Pastorello, G. (Gilberto), Trotta, C. (Carlo), Canfora, E. (Eleonora), Chu, H. (Housen), Christianson, D. (Danielle), Cheah, Y.-W. (You-Wei), Poindexter, C. (Cristina), Chen, J. (Jiquan), Elbashandy, A. (Abdelrahman), Humphrey, M. (Marty), Isaac, P. (Peter), Polidori, D. (Diego), Ribeca, A. (Alessio), van Ingen, C. (Catharine), Zhang, L. (Leiming), Amiro, B. (Brian), Ammann, C. (Christof), Arain, M. A. (M. Altaf), Ardo, J. (Jonas), Arkebauer, T. (Timothy), Arndt, S. K. (Stefan K.), Arriga, N. (Nicola), Aubinet, M. (Marc), Aurela, M. (Mika), Baldocchi, D. (Dennis), Barr, A. (Alan), Beamesderfer, E. (Eric), Marchesini, L. B. (Luca Belelli), Bergeron, O. (Onil), Beringer, J. (Jason), Bernhofer, C. (Christian), Berveiller, D. (Daniel), Billesbach, D. (Dave), Black, T. A. (Thomas Andrew), Blanken, P. D. (Peter D.), Bohrer, G. (Gil), Boike, J. (Julia), Bolstad, P. V. (Paul V.), Bonal, D. (Damien), Bonnefond, J.-M. (Jean-Marc), Bowling, D. R. (David R.), Bracho, R. (Rosvel), Brodeur, J. (Jason), Bruemmer, C. (Christian), Buchmann, N. (Nina), Burban, B. (Benoit), Burns, S. P. (Sean P.), Buysse, P. (Pauline), Cale, P. (Peter), Cavagna, M. (Mauro), Cellier, P. (Pierre), Chen, S. (Shiping), Chini, I. (Isaac), Christensen, T. R. (Torben R.), Cleverly, J. (James), Collalti, A. (Alessio), Consalvo, C. (Claudia), Cook, B. D. (Bruce D.), Cook, D. (David), Coursolle, C. (Carole), Cremonese, E. (Edoardo), Curtis, P. S. (Peter S.), D'Andrea, E. (Ettore), da Rocha, H. (Humberto), Dai, X. (Xiaoqin), Davis, K. J. (Kenneth J.), De Cinti, B. (Bruno), de Grandcourt, A. (Agnes), De Ligne, A. (Anne), De Oliveira, R. C. (Raimundo C.), Delpierre, N. (Nicolas), Desai, A. R. (Ankur R.), Di Bella, C. M. (Carlos Marcelo), di Tommasi, P. (Paul), Dolman, H. (Han), Domingo, F. (Francisco), Dong, G. (Gang), Dore, S. (Sabina), Duce, P. (Pierpaolo), Dufrene, E. (Eric), Dunn, A. (Allison), Dusek, J. (Jiri), Eamus, D. (Derek), Eichelmann, U. (Uwe), ElKhidir, H. A. (Hatim Abdalla M.), Eugster, W. (Werner), Ewenz, C. M. (Cacilia M.), Ewers, B. (Brent), Famulari, D. (Daniela), Fares, S. (Silvano), Feigenwinter, I. (Iris), Feitz, A. (Andrew), Fensholt, R. (Rasmus), Filippa, G. (Gianluca), Fischer, M. (Marc), Frank, J. (John), Galvagno, M. (Marta), Gharun, M. (Mana), Gianelle, D. (Damiano), Gielen, B. (Bert), Gioli, B. (Beniamino), Gitelson, A. (Anatoly), Goded, I. (Ignacio), Goeckede, M. (Mathias), Goldstein, A. H. (Allen H.), Gough, C. M. (Christopher M.), Goulden, M. L. (Michael L.), Graf, A. (Alexander), Griebel, A. (Anne), Gruening, C. (Carsten), Gruenwald, T. (Thomas), Hammerle, A. (Albin), Han, S. (Shijie), Han, X. (Xingguo), Hansen, B. U. (Birger Ulf), Hanson, C. (Chad), Hatakka, J. (Juha), He, Y. (Yongtao), Hehn, M. (Markus), Heinesch, B. (Bernard), Hinko-Najera, N. (Nina), Hoertnagl, L. (Lukas), Hutley, L. (Lindsay), Ibrom, A. (Andreas), Ikawa, H. (Hiroki), Jackowicz-Korczynski, M. (Marcin), Janous, D. (Dalibor), Jans, W. (Wilma), Jassal, R. (Rachhpal), Jiang, S. (Shicheng), Kato, T. (Tomomichi), Khomik, M. (Myroslava), Klatt, J. (Janina), Knohl, A. (Alexander), Knox, S. (Sara), Kobayashi, H. (Hideki), Koerber, G. (Georgia), Kolle, O. (Olaf), Kosugi, Y. (Yoshiko), Kotani, A. (Ayumi), Kowalski, A. (Andrew), Kruijt, B. (Bart), Kurbatova, J. (Julia), Kutsch, W. L. (Werner L.), Kwon, H. (Hyojung), Launiainen, S. (Samuli), Laurila, T. (Tuomas), Law, B. (Bev), Leuning, R. (Ray), Li, Y. (Yingnian), Liddell, M. (Michael), Limousin, J.-M. (Jean-Marc), Lion, M. (Marryanna), Liska, A. J. (Adam J.), Lohila, A. (Annalea), Lopez-Ballesteros, A. (Ana), Lopez-Blanco, E. (Efren), Loubet, B. (Benjamin), Loustau, D. (Denis), Lucas-Moffat, A. (Antje), Lueers, J. (Johannes), Ma, S. (Siyan), Macfarlane, C. (Craig), Magliulo, V. (Vincenzo), Maier, R. (Regine), Mammarella, I. (Ivan), Manca, G. (Giovanni), Marcolla, B. (Barbara), Margolis, H. A. (Hank A.), Marras, S. (Serena), Massman, W. (William), Mastepanov, M. (Mikhail), Matamala, R. (Roser), Matthes, J. H. (Jaclyn Hatala), Mazzenga, F. (Francesco), McCaughey, H. (Harry), McHugh, I. (Ian), McMillan, A. M. (Andrew M. S.), Merbold, L. (Lutz), Meyer, W. (Wayne), Meyers, T. (Tilden), Miller, S. D. (Scott D.), Minerbi, S. (Stefano), Moderow, U. (Uta), Monson, R. K. (Russell K.), Montagnani, L. (Leonardo), Moore, C. E. (Caitlin E.), Moors, E. (Eddy), Moreaux, V. (Virginie), Moureaux, C. (Christine), Munger, J. W. (J. William), Nakai, T. (Taro), Neirynck, J. (Johan), Nesic, Z. (Zoran), Nicolini, G. (Giacomo), Noormets, A. (Asko), Northwood, M. (Matthew), Nosetto, M. (Marcelo), Nouvellon, Y. (Yann), Novick, K. (Kimberly), Oechel, W. (Walter), Olesen, J. E. (Jorgen Eivind), Ourcival, J.-M. (Jean-Marc), Papuga, S. A. (Shirley A.), Parmentier, F.-J. (Frans-Jan), Paul-Limoges, E. (Eugenie), Pavelka, M. (Marian), Peichl, M. (Matthias), Pendall, E. (Elise), Phillips, R. P. (Richard P.), Pilegaard, K. (Kim), Pirk, N. (Norbert), Posse, G. (Gabriela), Powell, T. (Thomas), Prasse, H. (Heiko), Prober, S. M. (Suzanne M.), Rambal, S. (Serge), Rannik, U. (Ullar), Raz-Yaseef, N. (Naama), Reed, D. (David), de Dios, V. R. (Victor Resco), Restrepo-Coupe, N. (Natalia), Reverter, B. R. (Borja R.), Roland, M. (Marilyn), Sabbatini, S. (Simone), Sachs, T. (Torsten), Saleska, S. R. (Scott R.), Sanchez-Canete, E. P. (Enrique P.), Sanchez-Mejia, Z. M. (Zulia M.), Schmid, H. P. (Hans Peter), Schmidt, M. (Marius), Schneider, K. (Karl), Schrader, F. (Frederik), Schroder, I. (Ivan), Scott, R. L. (Russell L.), Sedlak, P. (Pavel), Serrano-Ortiz, P. (Penelope), Shao, C. (Changliang), Shi, P. (Peili), Shironya, I. (Ivan), Siebicke, L. (Lukas), Sigut, L. (Ladislav), Silberstein, R. (Richard), Sirca, C. (Costantino), Spano, D. (Donatella), Steinbrecher, R. (Rainer), Stevens, R. M. (Robert M.), Sturtevant, C. (Cove), Suyker, A. (Andy), Tagesson, T. (Torbern), Takanashi, S. (Satoru), Tang, Y. (Yanhong), Tapper, N. (Nigel), Thom, J. (Jonathan), Tiedemann, F. (Frank), Tomassucci, M. (Michele), Tuovinen, J.-P. (Juha-Pekka), Urbanski, S. (Shawn), Valentini, R. (Riccardo), van der Molen, M. (Michiel), van Gorsel, E. (Eva), van Huissteden, K. (Ko), Varlagin, A. (Andrej), Verfaillie, J. (Joseph), Vesala, T. (Timo), Vincke, C. (Caroline), Vitale, D. (Domenico), Vygodskaya, N. (Natalia), Walker, J. P. (Jeffrey P.), Walter-Shea, E. (Elizabeth), Wang, H. (Huimin), Weber, R. (Robin), Westermann, S. (Sebastian), Wille, C. (Christian), Wofsy, S. (Steven), Wohlfahrt, G. (Georg), Wolf, S. (Sebastian), Woodgate, W. (William), Li, Y. (Yuelin), Zampedri, R. (Roberto), Zhang, J. (Junhui), Zhou, G. (Guoyi), Zona, D. (Donatella), Agarwal, D. (Deb), Biraud, S. (Sebastien), Torn, M. (Margaret), and Papale, D. (Dario)

Abstract

The FLUXNET2015 dataset provides ecosystem-scale data on CO2, water, and energy exchange between the biosphere and the atmosphere, and other meteorological and biological measurements, from 212 sites around the globe (over 1500 site-years, up to and including year 2014). These sites, independently managed and operated, voluntarily contributed their data to create global datasets. Data were quality controlled and processed using uniform methods, to improve consistency and intercomparability across sites. The dataset is already being used in a number of applications, including ecophysiology studies, remote sensing studies, and development of ecosystem and Earth system models. FLUXNET2015 includes derived-data products, such as gap-filled time series, ecosystem respiration and photosynthetic uptake estimates, estimation of uncertainties, and metadata about the measurements, presented for the first time in this paper. In addition, 206 of these sites are for the first time distributed under a Creative Commons (CC-BY 4.0) license. This paper details this enhanced dataset and the processing methods, now made available as open-source codes, making the dataset more accessible, transparent, and reproducible.

Published
2020

25. The PROFOUND Database for evaluating vegetation models and simulating climate impacts on European forests

Author

Reyer, C.P.O., Silveyra Gonzalez, R., Dolos, K., Hartig, F., Hauf, Y., Noack, M., Lasch-Born, P., Rötzer, T., Pretzsch, H., Meesenburg, H., Fleck, S., Wagner, M., Bolte, A., Sanders, T.G.M., Kolari, P., Mäkelä, A., Vesala, T., Mammarella, I., Pumpanen, J., Collalti, A., Trotta, C., Matteucci, G., D'Andrea, E., Foltýnová, L., Krejza, J., Ibrom, A., Pilegaard, K., Loustau, D., Bonnefond, J.-M., Berbigier, P., Picart, D., Lafont, S., Dietzel, M., Cameron, D., Vieno, M., Tian, H., Palacios-Orueta, A., Cicuendez, V., Recuero, L., Wiese, K., Büchner, M., Lange, S., Volkholz, J., Kim, H., Horemans, J.A., Bohn, Friedrich, Steinkamp, J., Chikalanov, A., Weedon, G.P., Sheffield, J., Babst, F., Vega del Valle, I., Suckow, F., Martel, S., Mahnken, M., Gutsch, M., Frieler, K., Reyer, C.P.O., Silveyra Gonzalez, R., Dolos, K., Hartig, F., Hauf, Y., Noack, M., Lasch-Born, P., Rötzer, T., Pretzsch, H., Meesenburg, H., Fleck, S., Wagner, M., Bolte, A., Sanders, T.G.M., Kolari, P., Mäkelä, A., Vesala, T., Mammarella, I., Pumpanen, J., Collalti, A., Trotta, C., Matteucci, G., D'Andrea, E., Foltýnová, L., Krejza, J., Ibrom, A., Pilegaard, K., Loustau, D., Bonnefond, J.-M., Berbigier, P., Picart, D., Lafont, S., Dietzel, M., Cameron, D., Vieno, M., Tian, H., Palacios-Orueta, A., Cicuendez, V., Recuero, L., Wiese, K., Büchner, M., Lange, S., Volkholz, J., Kim, H., Horemans, J.A., Bohn, Friedrich, Steinkamp, J., Chikalanov, A., Weedon, G.P., Sheffield, J., Babst, F., Vega del Valle, I., Suckow, F., Martel, S., Mahnken, M., Gutsch, M., and Frieler, K.

Abstract

Process-based vegetation models are widely used to predict local and global ecosystem dynamics and climate change impacts. Due to their complexity, they require careful parameterization and evaluation to ensure that projections are accurate and reliable. The PROFOUND Database (PROFOUND DB) provides a wide range of empirical data on European forests to calibrate and evaluate vegetation models that simulate climate impacts at the forest stand scale. A particular advantage of this database is its wide coverage of multiple data sources at different hierarchical and temporal scales, together with environmental driving data as well as the latest climate scenarios. Specifically, the PROFOUND DB provides general site descriptions, soil, climate, CO2, nitrogen deposition, tree and forest stand level, and remote sensing data for nine contrasting forest stands distributed across Europe. Moreover, for a subset of five sites, time series of carbon fluxes, atmospheric heat conduction and soil water are also available. The climate and nitrogen deposition data contain several datasets for the historic period and a wide range of future climate change scenarios following the Representative Concentration Pathways (RCP2.6, RCP4.5, RCP6.0, RCP8.5). We also provide pre-industrial climate simulations that allow for model runs aimed at disentangling the contribution of climate change to observed forest productivity changes. The PROFOUND DB is available freely as a “SQLite” relational database or “ASCII” flat file version (at https://doi.org/10.5880/PIK.2020.006/; Reyer et al., 2020). The data policies of the individual contributing datasets are provided in the metadata of each data file. The PROFOUND DB can also be accessed via the ProfoundData R package (https://CRAN.R-project.org/package=ProfoundData; Silveyra Gonzalez et al., 2020), which provides basic functions to explore, plot and extract the data for model set-up, calibration and evaluation.

Published
2020

26. Vegetation feedbacks during drought exacerbate ozone air pollution extremes in Europe

Author

Lin, M., Horowitz, L. W., Xie, Y., Paulot, F., Malyshev, S., Shevliakova, E., Finco, Angelo, Gerosa, Giacomo Alessandro, Kubistin, D., Pilegaard, K., Finco A. (ORCID:0000-0002-2252-5129), Gerosa G. (ORCID:0000-0002-5352-3222), Lin, M., Horowitz, L. W., Xie, Y., Paulot, F., Malyshev, S., Shevliakova, E., Finco, Angelo, Gerosa, Giacomo Alessandro, Kubistin, D., Pilegaard, K., Finco A. (ORCID:0000-0002-2252-5129), and Gerosa G. (ORCID:0000-0002-5352-3222)

Abstract

Reducing surface ozone to meet the European Union’s target for human health has proven challenging despite stringent controls on ozone precursor emissions over recent decades. The most extreme ozone pollution episodes are linked to heatwaves and droughts, which are increasing in frequency and intensity over Europe, with severe impacts on natural and human systems. Here, we use observations and Earth system model simulations for the period 1960–2018 to show that ecosystem–atmosphere interactions, especially reduced ozone removal by water-stressed vegetation, exacerbate ozone air pollution over Europe. These vegetation feedbacks worsen peak ozone episodes during European mega-droughts, such as the 2003 event, offsetting much of the air quality improvements gained from regional emissions controls. As the frequency of hot and dry summers is expected to increase over the coming decades, this climate penalty could be severe and therefore needs to be considered when designing clean air policy in the European Union.

Published
2020

27. The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data.

Author

Pastorello G, Trotta C, Canfora E, Chu H, Christianson D, Cheah Y-W, Poindexter C, Chen J, Elbashandy A, Humphrey M, Isaac P, Polidori D, Ribeca A, van Ingen C, Zhang L, Amiro B, Ammann C, Arain MA, Ardö J, Arkebauer T, Arndt SK, Arriga N, Aubinet M, Aurela M, Baldocchi D, Barr A, Beamesderfer E, Marchesini LB, Bergeron O, Beringer J, Bernhofer C, Berveiller D, Billesbach D, Black TA, Blanken PD, Bohrer G, Boike J, Bolstad PV, Bonal D, Bonnefond J-M, Bowling DR, Bracho R, Brodeur J, Brümmer C, Buchmann N, Burban B, Burns SP, Buysse P, Cale P, Cavagna M, Cellier P, Chen S, Chini I, Christensen TR, Cleverly J, Collalti A, Consalvo C, Cook BD, Cook D, Coursolle C, Cremonese E, Curtis PS, D'Andrea E, da Rocha H, Dai X, Davis KJ, De Cinti B, de Grandcourt A, De Ligne A, De Oliveira RC, Delpierre N, Desai AR, Di Bella CM, di Tommasi P, Dolman H, Domingo F, Dong G, Dore S, Duce P, Dufrêne E, Dunn A, Dušek J, Eamus D, Eichelmann U, ElKhidir HAM, Eugster W, Ewenz CM, Ewers B, Famulari D, Fares S, Feigenwinter I, Feitz A, Fensholt R, Filippa G, Fischer M, Frank J, Galvagno M, Gharun M, Gianelle D, Gielen B, Gioli B, Gitelson A, Goded I, Goeckede M, Goldstein AH, Gough CM, Goulden ML, Graf A, Griebel A, Gruening C, Grünwald T, Hammerle A, Han S, Han X, Hansen BU, Hanson C, Hatakka J, He Y, Hehn M, Heinesch B, Hinko-Najera N, Hörtnagl L, Hutley L, Ibrom A, Ikawa H, Jackowicz-Korczynski M, Janouš D, Jans W, Jassal R, Jiang S, Kato T, Khomik M, Klatt J, Knohl A, Knox S, Kobayashi H, Koerber G, Kolle O, Kosugi Y, Kotani A, Kowalski A, Kruijt B, Kurbatova J, Kutsch WL, Kwon H, Launiainen S, Laurila T, Law B, Leuning R, Li Y, Liddell M, Limousin J-M, Lion M, Liska AJ, Lohila A, López-Ballesteros A, López-Blanco E, Loubet B, Loustau D, Lucas-Moffat A, Lüers J, Ma S, Macfarlane C, Magliulo V, Maier R, Mammarella I, Manca G, Marcolla B, Margolis HA, Marras S, Massman W, Mastepanov M, Matamala R, Matthes JH, Mazzenga F, McCaughey H, McHugh I, McMillan AMS, Merbold L, Meyer W, Meyers T, Miller SD, Minerbi S, Moderow U, Monson RK, Montagnani L, Moore CE, Moors E, Moreaux V, Moureaux C, Munger JW, Nakai T, Neirynck J, Nesic Z, Nicolini G, Noormets A, Northwood M, Nosetto M, Nouvellon Y, Novick K, Oechel W, Olesen JE, Ourcival J-M, Papuga SA, Parmentier F-J, Paul-Limoges E, Pavelka M, Peichl M, Pendall E, Phillips RP, Pilegaard K, Pirk N, Posse G, Powell T, Prasse H, Prober SM, Rambal S, Rannik Ü, Raz-Yaseef N, Reed D, de Dios VR, Restrepo-Coupe N, Reverter BR, Roland M, Sabbatini S, Sachs T, Saleska SR, Sánchez-Cañete EP, Sanchez-Mejia ZM, Schmid HP, Schmidt M, Schneider K, Schrader F, Schroder I, Scott RL, Sedlák P, Serrano-Ortíz P, Shao C, Shi P, Shironya I, Siebicke L, Šigut L, Silberstein R, Sirca C, Spano D, Steinbrecher R, Stevens RM, Sturtevant C, Suyker A, Tagesson T, Takanashi S, Tang Y, Tapper N, Thom J, Tiedemann F, Tomassucci M, Tuovinen J-P, Urbanski S, Valentini R, van der Molen M, van Gorsel E, van Huissteden K, Varlagin A, Verfaillie J, Vesala T, Vincke C, Vitale D, Vygodskaya N, Walker JP, Walter-Shea E, Wang H, Weber R, Westermann S, Wille C, Wofsy S, Wohlfahrt G, Wolf S, Woodgate W, Zampedri R, Zhang J, Zhou G, Zona D, Agarwal D, Biraud S, Torn M, Papale D, Pastorello G, Trotta C, Canfora E, Chu H, Christianson D, Cheah Y-W, Poindexter C, Chen J, Elbashandy A, Humphrey M, Isaac P, Polidori D, Ribeca A, van Ingen C, Zhang L, Amiro B, Ammann C, Arain MA, Ardö J, Arkebauer T, Arndt SK, Arriga N, Aubinet M, Aurela M, Baldocchi D, Barr A, Beamesderfer E, Marchesini LB, Bergeron O, Beringer J, Bernhofer C, Berveiller D, Billesbach D, Black TA, Blanken PD, Bohrer G, Boike J, Bolstad PV, Bonal D, Bonnefond J-M, Bowling DR, Bracho R, Brodeur J, Brümmer C, Buchmann N, Burban B, Burns SP, Buysse P, Cale P, Cavagna M, Cellier P, Chen S, Chini I, Christensen TR, Cleverly J, Collalti A, Consalvo C, Cook BD, Cook D, Coursolle C, Cremonese E, Curtis PS, D'Andrea E, da Rocha H, Dai X, Davis KJ, De Cinti B, de Grandcourt A, De Ligne A, De Oliveira RC, Delpierre N, Desai AR, Di Bella CM, di Tommasi P, Dolman H, Domingo F, Dong G, Dore S, Duce P, Dufrêne E, Dunn A, Dušek J, Eamus D, Eichelmann U, ElKhidir HAM, Eugster W, Ewenz CM, Ewers B, Famulari D, Fares S, Feigenwinter I, Feitz A, Fensholt R, Filippa G, Fischer M, Frank J, Galvagno M, Gharun M, Gianelle D, Gielen B, Gioli B, Gitelson A, Goded I, Goeckede M, Goldstein AH, Gough CM, Goulden ML, Graf A, Griebel A, Gruening C, Grünwald T, Hammerle A, Han S, Han X, Hansen BU, Hanson C, Hatakka J, He Y, Hehn M, Heinesch B, Hinko-Najera N, Hörtnagl L, Hutley L, Ibrom A, Ikawa H, Jackowicz-Korczynski M, Janouš D, Jans W, Jassal R, Jiang S, Kato T, Khomik M, Klatt J, Knohl A, Knox S, Kobayashi H, Koerber G, Kolle O, Kosugi Y, Kotani A, Kowalski A, Kruijt B, Kurbatova J, Kutsch WL, Kwon H, Launiainen S, Laurila T, Law B, Leuning R, Li Y, Liddell M, Limousin J-M, Lion M, Liska AJ, Lohila A, López-Ballesteros A, López-Blanco E, Loubet B, Loustau D, Lucas-Moffat A, Lüers J, Ma S, Macfarlane C, Magliulo V, Maier R, Mammarella I, Manca G, Marcolla B, Margolis HA, Marras S, Massman W, Mastepanov M, Matamala R, Matthes JH, Mazzenga F, McCaughey H, McHugh I, McMillan AMS, Merbold L, Meyer W, Meyers T, Miller SD, Minerbi S, Moderow U, Monson RK, Montagnani L, Moore CE, Moors E, Moreaux V, Moureaux C, Munger JW, Nakai T, Neirynck J, Nesic Z, Nicolini G, Noormets A, Northwood M, Nosetto M, Nouvellon Y, Novick K, Oechel W, Olesen JE, Ourcival J-M, Papuga SA, Parmentier F-J, Paul-Limoges E, Pavelka M, Peichl M, Pendall E, Phillips RP, Pilegaard K, Pirk N, Posse G, Powell T, Prasse H, Prober SM, Rambal S, Rannik Ü, Raz-Yaseef N, Reed D, de Dios VR, Restrepo-Coupe N, Reverter BR, Roland M, Sabbatini S, Sachs T, Saleska SR, Sánchez-Cañete EP, Sanchez-Mejia ZM, Schmid HP, Schmidt M, Schneider K, Schrader F, Schroder I, Scott RL, Sedlák P, Serrano-Ortíz P, Shao C, Shi P, Shironya I, Siebicke L, Šigut L, Silberstein R, Sirca C, Spano D, Steinbrecher R, Stevens RM, Sturtevant C, Suyker A, Tagesson T, Takanashi S, Tang Y, Tapper N, Thom J, Tiedemann F, Tomassucci M, Tuovinen J-P, Urbanski S, Valentini R, van der Molen M, van Gorsel E, van Huissteden K, Varlagin A, Verfaillie J, Vesala T, Vincke C, Vitale D, Vygodskaya N, Walker JP, Walter-Shea E, Wang H, Weber R, Westermann S, Wille C, Wofsy S, Wohlfahrt G, Wolf S, Woodgate W, Zampedri R, Zhang J, Zhou G, Zona D, Agarwal D, Biraud S, Torn M, and Papale D

Abstract

The FLUXNET2015 dataset provides ecosystem-scale data on CO2, water, and energy exchange between the biosphere and the atmosphere, and other meteorological and biological measurements, from 212 sites around the globe (over 1500 site-years, up to and including year 2014). These sites, independently managed and operated, voluntarily contributed their data to create global datasets. Data were quality controlled and processed using uniform methods, to improve consistency and intercomparability across sites. The dataset is already being used in a number of applications, including ecophysiology studies, remote sensing studies, and development of ecosystem and Earth system models. FLUXNET2015 includes derived-data products, such as gap-filled time series, ecosystem respiration and photosynthetic uptake estimates, estimation of uncertainties, and metadata about the measurements, presented for the first time in this paper. In addition, 206 of these sites are for the first time distributed under a Creative Commons (CC-BY 4.0) license. This paper details this enhanced dataset and the processing methods, now made available as open-source codes, making the dataset more accessible, transparent, and reproducible.

Published
2020

28. Evidence for soil water control on carbon and water dynamics in European forests during the extremely dry year: 2003

Author

Granier, A., Reichstein, M., Bréda, N., Janssens, I.A., Falge, E., Ciais, P., Grünwald, T., Aubinet, M., Berbigier, P., Bernhofer, C., Buchmann, N., Facini, O., Grassi, G., Heinesch, B., Ilvesniemi, H., Keronen, P., Knohl, A., Köstner, B., Lagergren, F., Lindroth, A., Longdoz, B., Loustau, D., Mateus, J., Montagnani, L., Nys, C., Moors, E., Papale, D., Peiffer, M., Pilegaard, K., Pita, G., Pumpanen, J., Rambal, S., Rebmann, C., Rodrigues, A., Seufert, G., Tenhunen, J., Vesala, T., and Wang, Q.

Published
2007
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29. Effects of climate and management intensity on nitrous oxide emissions in grassland systems across Europe

Author

Flechard, C.R., Ambus, P., Skiba, U., Rees, R.M., Hensen, A., van Amstel, A., Dasselaar, A. van den Pol-van, Soussana, J.-F., Jones, M., Clifton-Brown, J., Raschi, A., Horvath, L., Neftel, A., Jocher, M., Ammann, C., Leifeld, J., Fuhrer, J., Calanca, P., Thalman, E., Pilegaard, K., Di Marco, C., Campbell, C., Nemitz, E., Hargreaves, K.J., Levy, P.E., Ball, B.C., Jones, S.K., van de Bulk, W.C.M., Groot, T., Blom, M., Domingues, R., Kasper, G., Allard, V., Ceschia, E., Cellier, P., Laville, P., Henault, C., Bizouard, F., Abdalla, M., Williams, M., Baronti, S., Berretti, F., and Grosz, B.

Published
2007
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30. Partitioning European grassland net ecosystem CO 2 exchange into gross primary productivity and ecosystem respiration using light response function analysis

Author

Gilmanov, T.G., Soussana, J.F., Aires, L., Allard, V., Ammann, C., Balzarolo, M., Barcza, Z., Bernhofer, C., Campbell, C.L., Cernusca, A., Cescatti, A., Clifton-Brown, J., Dirks, B.O.M., Dore, S., Eugster, W., Fuhrer, J., Gimeno, C., Gruenwald, T., Haszpra, L., Hensen, A., Ibrom, A., Jacobs, A.F.G., Jones, M.B., Lanigan, G., Laurila, T., Lohila, A., G.Manca, Marcolla, B., Nagy, Z., Pilegaard, K., Pinter, K., Pio, C., Raschi, A., Rogiers, N., Sanz, M.J., Stefani, P., Sutton, M., Tuba, Z., Valentini, R., Williams, M.L., and Wohlfahrt, G.

Published
2007
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31. Full accounting of the greenhouse gas (CO 2, N 2O, CH 4) budget of nine European grassland sites

Author

Soussana, J.F., Allard, V., Pilegaard, K., Ambus, P., Amman, C., Campbell, C., Ceschia, E., Clifton-Brown, J., Czobel, S., Domingues, R., Flechard, C., Fuhrer, J., Hensen, A., Horvath, L., Jones, M., Kasper, G., Martin, C., Nagy, Z., Neftel, A., Raschi, A., Baronti, S., Rees, R.M., Skiba, U., Stefani, P., Manca, G., Sutton, M., Tuba, Z., and Valentini, R.

Published
2007
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33. Europe-wide reduction in primary productivity caused by the heat and drought in 2003

Author

Ciais, Ph., Reichstein, M., Viovy, N., Granier, A., Ogee, J., Allard, V., Aubinet, M., Buchmann, N., Bernhofer, Chr., Carrara, A., Chevallier, F., De Noblet, N., Friend, A. D., Friedlingstein, P., Grunwald, T., Heinesch, B., Keronen, P., Knohl, A., Krinner, G., Loustau, D., Manca, G., Matteucci, G., Miglietta, F., Ourcival, J. M., Papale, D., Pilegaard, K., Rambal, S., Seufert, G., Soussana, J. F., Sanz, M. J., Schulze, E. D., Vesala, T., and Valentini, R.

Subjects
Environmental issues, Science and technology, Zoology and wildlife conservation
Abstract

Author(s): Ph. Ciais (corresponding author) [1]; M. Reichstein [2, 3]; N. Viovy [1]; A. Granier [4]; J. Ogée [5]; V. Allard [6]; M. Aubinet [7]; N. Buchmann [8]; Chr. Bernhofer [...]

Published
2005
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38. Respiration as the main determinant of carbon balance in European forests

Author

Valentini, R., Matteucci, G., Dolman, A. J., Schulze, E.-D., Rebmann, C., Moors, E. J., Granier, A., Gross, P., Jensen, N. O., Pilegaard, K., Lindroth, A., Grelle, A., Bernhofer, C., Grunwald, T., Aubinet, M., Ceulemans, R., Kowalski, A. S., Vesala, T., Rannik, U., Berbigier, P., Loustau, D., Guðmundsson, J., Thorgeirsson, H., Ibrom, A., Morgenstern, K., Clement, R., Moncrieff, J., Montagnani, L., Minerbi, S., and Jarvis, P. G.

Subjects
Environmental issues, Science and technology, Zoology and wildlife conservation
Abstract

Author(s): R. Valentini (corresponding author) [1]; G. Matteucci [1]; A. J. Dolman [2]; E.-D. Schulze [3, 4]; C. Rebmann [3, 4]; E. J. Moors [2]; A. Granier [5]; P. Gross [...]

Published
2000
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47. Estimates of the Annual Net Carbon and Water Exchange of Forests: The EUROFLUX Methodology

Author

Aubinet, M., primary, Grelle, A., additional, Ibrom, A., additional, Rannik, Ü., additional, Moncrieff, J., additional, Foken, T., additional, Kowalski, A.S., additional, Martin, P.H., additional, Berbigier, P., additional, Bernhofer, Ch., additional, Clement, R., additional, Elbers, J., additional, Granier, A., additional, Grünwald, T., additional, Morgenstern, K., additional, Pilegaard, K., additional, Rebmann, C., additional, Snijders, W., additional, Valentini, R., additional, and Vesala, T., additional

Published
1999
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48. Elemental Composition of Natural Nanoparticles and Fine Colloids in European Forest Stream Waters and Their Role as Phosphorus Carriers

Author

Gottselig, Nina, Amelung, W, Kirchner, J W, Bol, R, Eugster, Werner, Granger, S J, Hernández-Crespo, C, Herrmann, F, Keizer, J. J, Korkiakoski, M, Laudon, H, Lehner, I, Löfgren, S, Lohila, A, Macleod, C J A, Mölder, M, Müller, C, Nasta, P, Nischwitz, V, Paul-Limoges, Eugénie, Pierret, M C, Pilegaard, K, Romano, N, Sebastià, M T, Stähli, M, Voltz, M, Vereecken, H, Siemens, J, Klumpp, E, University of Zurich, Klumpp, E, Gottselig, N., Amelung, W., Kirchner, J. W., Bol, R., Eugster, W., Granger, S. J., Hernandez-Crespo, C., Herrmann, F., Keizer, J. J., Korkiakoski, M., Laudon, H., Lehner, I., Löfgren, S., Lohila, A., Macleod, C. J. A., Mã¶lder, M., Mölder, C., Nasta, Paolo, Nischwitz, V., Paul-Limoges, E., Pierret, M. C., Pilegaard, K., Romano, Nunzio, Sebastià, M. T., Stähli, M., Voltz, M., Vereecken, H., Siemens, J., and Klumpp, E.

Subjects
2300 General Environmental Science, 10122 Institute of Geography, 2304 Environmental Chemistry, Hidrologia, 1902 Atmospheric Science, ddc:550, chemical composition, chemical element, colloid, forested catchment, headwater, nanoparticle, organic carbon, phosphorus, stream water, Europe, 2306 Global and Planetary Change, 910 Geography & travel, Aigua--Contaminació, Aigua--Química, Cursos d'aigua
Abstract

Biogeochemical cycling of elements largely occurs in dissolved state, but many elements may also be bound to natural nanoparticles (NNP, 1-100 nm) and fine colloids (100-450 nm). We examined the hypothesis that the size and composition of stream water NNP and colloids vary systematically across Europe. To test this hypothesis, 96 stream water samples were simultaneously collected in 26 forested headwater catchments along two transects across Europe. Three size fractions (1-20 nm, >20-60 nm, >60 nm) of NNP and fine colloids were identified with Field Flow Fractionation coupled to inductively coupled plasma mass-spectrometry and an organic carbon detector. The results showed that NNP and fine colloids constituted between 2±5% (Si) and 53±21% (Fe; mean ± SD) of total element concentrations, indicating a substantial contribution of particles to element transport in these European streams, especially for P and Fe. The particulate contents of Fe, Al and organic C were correlated to their total element concentrations, but those of particulate Si, Mn, P and Ca were not. The fine colloidal fractions >60 nm were dominated by clay minerals across all sites. The resulting element patterns of NNP

Published
2017

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