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Near surface turbulent momentum flux estimates are performed over the Aegean Sea, using two different approaches regarding the drag coefficient formulation, a wave boundary layer model (referred here as KCM) and the most commonly used Coupled Ocean-Atmosphere Response Experiment (COARE) algorithm. The KCM model incorporates modifications in the energy-containing wave spectrum to account for the wave conditions of the Aegean Sea, and surface similarity to account for the stratification effects. Airborne turbulence data during an Etesian outbreak over Aegean Sea, Greece are processed to evaluate the simulations. KCM estimates found up to 10% higher than COARE ones, indicating that the wave-induced momentum flux may be insufficiently parameterized in COARE. Turbulent fluxes measured at about 150 m, and reduced to their surface values accounting for the vertical flux divergence, are consistently lower than the estimates. Under unstable atmospheric stratification and low to moderate wind conditions, the residuals between estimates and measurements are less than 40%. On the other hand, under stable stratification and strong winds, the majority of the residuals are more than 40%. This discrepancy is associated with the relatively high measurement level, shallow boundary layer, and the presence of a low level jet.