24 results on '"Porth, Ilga M."'
Search Results
2. Prospects: The Spruce Genome, a Model for Understanding Gymnosperm Evolution and Supporting Tree Improvement Efforts
- Author
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Porth, Ilga M., De la Torre, Amanda R., El-Kassaby, Yousry A., Kole, Chittaranjan, Series Editor, Porth, Ilga M., editor, and De la Torre, Amanda R., editor
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- 2020
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3. Genomic Selection in Canadian Spruces
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El-Kassaby, Yousry A., Ratcliffe, Blaise, El-Dien, Omnia Gamal, Sun, Shuzhen, Chen, Charles, Cappa, Eduardo P., Porth, Ilga M., Kole, Chittaranjan, Series Editor, Porth, Ilga M., editor, and De la Torre, Amanda R., editor
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- 2020
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4. The Terpene Synthase Gene Family in Norway Spruce
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Yan, Xue-Mei, Zhou, Shan-Shan, Porth, Ilga M., Mao, Jian-Feng, Kole, Chittaranjan, Series Editor, Porth, Ilga M., editor, and De la Torre, Amanda R., editor
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- 2020
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- View/download PDF
5. Does urbanisation lead to parallel demographic shifts across the world in a cosmopolitan plant?
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Caizergues, Aude E., primary, Santangelo, James S., additional, Ness, Rob W., additional, Angeoletto, Fabio, additional, Anstett, Daniel N., additional, Anstett, Julia, additional, Baena‐Diaz, Fernanda, additional, Carlen, Elizabeth J., additional, Chaves, Jaime A., additional, Comerford, Mattheau S., additional, Dyson, Karen, additional, Falahati‐Anbaran, Mohsen, additional, Fellowes, Mark D. E., additional, Hodgins, Kathryn A., additional, Hood, Glen Ray, additional, Iñiguez‐Armijos, Carlos, additional, Kooyers, Nicholas J., additional, Lázaro‐Lobo, Adrián, additional, Moles, Angela T., additional, Munshi‐South, Jason, additional, Paule, Juraj, additional, Porth, Ilga M., additional, Santiago‐Rosario, Luis Y., additional, Whitney, Kaitlin Stack, additional, Tack, Ayko J. M., additional, and Johnson, Marc T. J., additional
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- 2024
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- View/download PDF
6. Does urbanisation lead to parallel demographic shifts across the world in a cosmopolitan plant?
- Author
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Caizergues, Aude E., Santangelo, James S., Ness, Rob W., Angeoletto, Fabio, Anstett, Daniel N., Anstett, Julia, Baena-Diaz, Fernanda, Carlen, Elizabeth J., Chaves, Jaime A., Comerford, Mattheau S., Dyson, Karen, Falahati-Anbaran, Mohsen, Fellowes, Mark D. E., Hodgins, Kathryn A., Hood, Glen Ray, Iñiguez-Armijos, Carlos, Kooyers, Nicholas J., Lázaro-Lobo, Adrián, Moles, Angela T., Munshi-South, Jason, Paule, Juraj, Porth, Ilga M., Santiago-Rosario, Luis Y., Whitney, Kaitlin Stack, Tack, Ayco J. M., Johnson, Marc T. J., Caizergues, Aude E., Santangelo, James S., Ness, Rob W., Angeoletto, Fabio, Anstett, Daniel N., Anstett, Julia, Baena-Diaz, Fernanda, Carlen, Elizabeth J., Chaves, Jaime A., Comerford, Mattheau S., Dyson, Karen, Falahati-Anbaran, Mohsen, Fellowes, Mark D. E., Hodgins, Kathryn A., Hood, Glen Ray, Iñiguez-Armijos, Carlos, Kooyers, Nicholas J., Lázaro-Lobo, Adrián, Moles, Angela T., Munshi-South, Jason, Paule, Juraj, Porth, Ilga M., Santiago-Rosario, Luis Y., Whitney, Kaitlin Stack, Tack, Ayco J. M., and Johnson, Marc T. J.
- Abstract
Urbanisation is occurring globally, leading to dramatic environmental changes that are altering the ecology and evolution of species. In particular, the expansion of human infrastructure and the loss and fragmentation of natural habitats in cities is predicted to increase genetic drift and reduce gene flow by reducing the size and connectivity of populations. Alternatively, the 'urban facilitation model' suggests that some species will have greater gene flow into and within cities leading to higher diversity and lower differentiation in urban populations. These alternative hypotheses have not been contrasted across multiple cities. Here, we used the genomic data from the GLobal Urban Evolution project (GLUE), to study the effects of urbanisation on non-adaptive evolutionary processes of white clover (Trifolium repens) at a global scale. We found that white clover populations presented high genetic diversity and no evidence of reduced Ne linked to urbanisation. On the contrary, we found that urban populations were less likely to experience a recent decrease in effective population size than rural ones. In addition, we found little genetic structure among populations both globally and between urban and rural populations, which showed extensive gene flow between habitats. Interestingly, white clover displayed overall higher gene flow within urban areas than within rural habitats. Our study provides the largest comprehensive test of the demographic effects of urbanisation. Our results contrast with the common perception that heavily altered and fragmented urban environments will reduce the effective population size and genetic diversity of populations and contribute to their isolation.
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- 2024
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7. Unraveling the evolutionary dynamics of the TPS gene family in land plants
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Yan, Xue-Mei, primary, Zhou, Shan-Shan, additional, Liu, Hui, additional, Zhao, Shi-Wei, additional, Tian, Xue-Chan, additional, Shi, Tian-Le, additional, Bao, Yu-Tao, additional, Li, Zhi-Chao, additional, Jia, Kai-Hua, additional, Nie, Shuai, additional, Guo, Jing-Fang, additional, Kong, Lei, additional, Porth, Ilga M., additional, and Mao, Jian-Feng, additional
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- 2023
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8. Does urbanization lead to parallel demographic shifts across the world in a cosmopolitan plant?
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Caizergues, Aude E., primary, Santangelo, James S., additional, Ness, Rob W., additional, Angeoletto, Fabio, additional, Anstett, Daniel N., additional, Anstett, Julia, additional, Baena-Diaz, Fernanda, additional, Carlen, Elizabeth J., additional, Chaves, Jaime A., additional, Comerford, Mattheau S., additional, Dyson, Karen, additional, Falahati-Anbaran, Mohsen, additional, Fellowes, Mark D.E., additional, Hodgins, Kathryn A., additional, Hood, Glen Ray, additional, Iniguez-Armijos, Carlos, additional, Kooyers, Nicholas John, additional, Lazaro-Lobo, Adrian, additional, Moles, Angela T., additional, Munshi-South, Jason, additional, Paule, Juraj, additional, Porth, Ilga M., additional, Santiago-Rosario, Luis Y., additional, Stack Whitney, Kaitlin, additional, Tack, Ayco J. M., additional, and Johnson, Marc T.J., additional
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- 2023
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9. Unraveling the evolutionary dynamics of the TPS gene family in land plants
- Author
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Yan, Xue-Mei, Zhou, Shan-Shan, Liu, Hui, Zhao, Shi-Wei, Tian, Xue-Chan, Shi, Tian-Le, Bao, Yu-Tao, Li, Zhi-Chao, Jia, Kai-Hua, Nie, Shuai, Guo, Jing-Fang, Kong, Lei, Porth, Ilga M., Mao, Jian-Feng, Yan, Xue-Mei, Zhou, Shan-Shan, Liu, Hui, Zhao, Shi-Wei, Tian, Xue-Chan, Shi, Tian-Le, Bao, Yu-Tao, Li, Zhi-Chao, Jia, Kai-Hua, Nie, Shuai, Guo, Jing-Fang, Kong, Lei, Porth, Ilga M., and Mao, Jian-Feng
- Abstract
Terpenes and terpenoids are key natural compounds for plant defense, development, and composition of plant oil. The synthesis and accumulation of a myriad of volatile terpenoid compounds in these plants may dramatically alter the quality and flavor of the oils, which provide great commercial utilization value for oil-producing plants. Terpene synthases (TPSs) are important enzymes responsible for terpenic diversity. Investigating the differentiation of the TPS gene family could provide valuable theoretical support for the genetic improvement of oil-producing plants. While the origin and function of TPS genes have been extensively studied, the exact origin of the initial gene fusion event - it occurred in plants or microbes - remains uncertain. Furthermore, a comprehensive exploration of the TPS gene differentiation is still pending. Here, phylogenetic analysis revealed that the fusion of the TPS gene likely occurred in the ancestor of land plants, following the acquisition of individual C- and N- terminal domains. Potential mutual transfer of TPS genes was observed among microbes and plants. Gene synteny analysis disclosed a differential divergence pattern between TPS-c and TPS-e/f subfamilies involved in primary metabolism and those (TPS-a/b/d/g/h subfamilies) crucial for secondary metabolites. Biosynthetic gene clusters (BGCs) analysis suggested a correlation between lineage divergence and potential natural selection in structuring terpene diversities. This study provides fresh perspectives on the origin and evolution of the TPS gene family.
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- 2023
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10. Unraveling the evolutionary dynamics of the TPS gene family in land plants.
- Author
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Xue-Mei Yan, Shan-Shan Zhou, Hui Liu, Shi-Wei Zhao, Xue-Chan Tian, Tian-Le Shi, Yu-Tao Bao, Zhi-Chao Li, Kai-Hua Jia, Shuai Nie, Jing-Fang Guo, Lei Kong, Porth, Ilga M., and Jian-Feng Mao
- Subjects
GENE families ,TERPENES ,NATURAL selection ,HORIZONTAL gene transfer ,METABOLITES ,GENE fusion - Abstract
Terpenes and terpenoids are key natural compounds for plant defense, development, and composition of plant oil. The synthesis and accumulation of a myriad of volatile terpenoid compounds in these plants may dramatically alter the quality and flavor of the oils, which provide great commercial utilization value for oil-producing plants. Terpene synthases (TPSs) are important enzymes responsible for terpenic diversity. Investigating the differentiation of the TPS gene family could provide valuable theoretical support for the genetic improvement of oil-producing plants. While the origin and function of TPS genes have been extensively studied, the exact origin of the initial gene fusion event - it occurred in plants or microbes - remains uncertain. Furthermore, a comprehensive exploration of the TPS gene differentiation is still pending. Here, phylogenetic analysis revealed that the fusion of the TPS gene likely occurred in the ancestor of land plants, following the acquisition of individual C- and Nterminal domains. Potential mutual transfer of TPS genes was observed among microbes and plants. Gene synteny analysis disclosed a differential divergence pattern between TPS-c and TPS-e/f subfamilies involved in primary metabolism and those (TPS-a/b/d/g/h subfamilies) crucial for secondary metabolites. Biosynthetic gene clusters (BGCs) analysis suggested a correlation between lineage divergence and potential natural selection in structuring terpene diversities. This study provides fresh perspectives on the origin and evolution of the TPS gene family. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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- View/download PDF
11. Coping with Environmental Constraints: Geographically Divergent Adaptive Evolution and Germination Plasticity in the Transcontinental Populus tremuloides
- Author
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Goessen, Roos, Isabel, Nathalie, Wehenkel, Christian, Pavy, Nathalie, Tischenko, Lisa, Touchette, Lyne, Giguère, Isabelle, Gros-Louis, Marie-Claude, Laroche, Jérôme, Boyle, Brian, Soolanayakanahally, Raju, Mock, Karen E., Hernández-Velasco, Javier, Simental-Rodriguez, Sergio Leonel, Bousquet, Jean, Porth, Ilga M., and John Wiley & Sons Ltd.
- Subjects
clonal richness ,Ecology and Evolutionary Biology ,Plant Sciences ,maternal effects ,ploidy ,quaking aspen ,Agriculture ,Genetics and Genomics ,genetic diversity ,Forest Sciences ,local adaptation ,keystone species - Abstract
Societal Impact Statement Syntheses clearly show that global warming is affecting ecosystems and biodiversity around the world. New methods and measures are needed to predict the climate resilience of plant species critical to ecosystem stability, to improve ecological management and to support habitat restoration and human well-being. Widespread keystone species such as aspen are important targets in the study of resilience to future climate conditions because they play a crucial role in maintaining various ecosystem functions and may contain genetic material with untapped adaptive potential. Here, we present a new framework in support of climate-resilient revegetation based on comprehensively understood patterns of genetic variation in aspen. Summary Elucidating species' genetic makeup and seed germination plasticity is essential to inform tree conservation efforts in the face of climate change. Populus tremuloides Michx. (aspen) occurs across diverse landscapes and reaches from Alaska to central Mexico, thus representing an early-successional model for ecological genomics. Within drought-affected regions, aspen shows ploidy changes and/or shifts from sexual to clonal reproduction, and reduced diversity and dieback have already been observed. We genotyped over 1000 individuals, covering aspen's entire range, for approximately 44,000 single-nucleotide polymorphisms (SNPs) to assess large-scale and fine-scale genetic structure, variability in reproductive type (sexual/clonal), polyploidy and genomic regions under selection. We developed and implemented a rapid and reliable analysis pipeline (FastPloidy) to assess the presence of polyploidy. To gain insights into plastic responses, we contrasted seed germination from western US and eastern Canadian natural populations under elevated temperature and water stress. Four major genetic clusters were identified range wide; a preponderance of triploids and clonemates was found within western and southern North American regions, respectively. Genomic regions involving approximately 1000 SNPs under selection were identified with association to temperature and precipitation variation. Under drought stress, western US genotypes exhibited significantly lower germination rates compared with those from eastern North America, a finding that was unrelated to differences in mutation load (ploidy). This study provided new insights into the adaptive evolution of a key indicator tree that provisions crucial ecosystem services across North America, but whose presence is steadily declining within its western distribution. We uncovered untapped adaptive potential across the species' range which can form the basis for climate-resilient revegetation.
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- 2022
12. Coping with environmental constraints: Geographically divergent adaptive evolution and germination plasticity in the transcontinentalPopulus tremuloides
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Goessen, Roos, primary, Isabel, Nathalie, additional, Wehenkel, Christian, additional, Pavy, Nathalie, additional, Tischenko, Lisa, additional, Touchette, Lyne, additional, Giguère, Isabelle, additional, Gros‐Louis, Marie‐Claude, additional, Laroche, Jérôme, additional, Boyle, Brian, additional, Soolanayakanahally, Raju, additional, Mock, Karen, additional, Hernández‐Velasco, Javier, additional, Simental‐Rodriguez, Sergio Leonel, additional, Bousquet, Jean, additional, and Porth, Ilga M., additional
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- 2022
- Full Text
- View/download PDF
13. Global urban environmental change drives adaptation in white clover
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Santangelo, James S., Ness, Rob W., Cohan, Beata, Fitzpatrick, Connor R., Innes, Simon G., Koch, Sophie, Miles, Lindsay S., Munim, Samreen, Peres-Neto, Pedro R., Prashad, Cindy, Tong, Alex T., Aguirre, Windsor E., Akinwole, Philips O., Alberti, Marina, Alvarez, Jackie, Anderson, Jill T., Anderson, Joseph J., Ando, Yoshino, Andrew, Nigel R., Angeoletto, Fabio, Anstett, Daniel N., Anstett, Julia, Aoki-Goncalves, Felipe, Arietta, A. Z. Andis, Arroyo, Mary T. K., Austen, Emily J., Baena-Diaz, Fernanda, Barker, Cory A., Baylis, Howard A., Beliz, Julia M., Benitez-Mora, Alfonso, Bickford, David, Biedebach, Gabriela, Blackburn, Gwylim S., Boehm, Mannfred M. A., Bonser, Stephen P., Bonte, Dries, Bragger, Jesse R., Branquinho, Cristina, Brans, Kristien, I, Bresciano, Jorge C., Brom, Peta D., Bucharova, Anna, Burt, Briana, Cahill, James F., Campbell, Katelyn D., Carlen, Elizabeth J., Carmona, Diego, Castellanos, Maria Clara, Centenaro, Giada, Chalen, Izan, Chaves, Jaime A., Chavez-Pesqueira, Mariana, Chen, Xiao-Yong, Chilton, Angela M., Chomiak, Kristina M., Cisneros-Heredia, Diego F., Cisse, Ibrahim K., Classen, Aimee T., Comerford, Mattheau S., Fradinger, Camila Cordoba, Corney, Hannah, Crawford, Andrew J., Crawford, Kerri M., Dahirel, Maxime, David, Santiago, De Haan, Robert, Deacon, Nicholas J., Dean, Clare, Del-Val, Ek, Deligiannis, Eleftherios K., Denney, Derek, Dettlaff, Margarete A., DiLeo, Michelle F., Ding, Yuan-Yuan, Dominguez-Lopez, Moises E., Dominoni, Davide M., Draud, Savannah L., Dyson, Karen, Ellers, Jacintha, Espinosa, Carlos, I, Essi, Liliana, Falahati-Anbaran, Mohsen, Falcao, Jessica C. F., Fargo, Hayden T., Fellowes, Mark D. E., Fitzpatrick, Raina M., Flaherty, Leah E., Flood, Padraic J., Flores, Maria F., Fornoni, Juan, Foster, Amy G., Frost, Christopher J., Fuentes, Tracy L., Fulkerson, Justin R., Gagnon, Edeline, Garbsch, Frauke, Garroway, Colin J., Gerstein, Aleeza C., Giasson, Mischa M., Girdler, E. Binney, Gkelis, Spyros, Godsoe, William, Golemiec, Anneke M., Golemiec, Mireille, Gonzalez-Lagos, Cesar, Gorton, Amanda J., Gotanda, Kiyoko M., Granath, Gustaf, Greiner, Stephan, Griffiths, Joanna S., Grilo, Filipa, Gundel, Pedro E., Hamilton, Benjamin, Hardin, Joyce M., He, Tianhua, Heard, Stephen B., Henriques, Andre F., Hernandez-Poveda, Melissa, Hetherington-Rauth, Molly C., Hill, Sarah J., Hochuli, Dieter F., Hodgins, Kathryn A., Hood, Glen R., Hopkins, Gareth R., Hovanes, Katherine A., Howard, Ava R., Hubbard, Sierra C., Ibarra-Cerdena, Carlos N., Iniguez-Armijos, Carlos, Jara-Arancio, Paola, Jarrett, Benjamin J. M., Jeannot, Manon, Jimenez-Lobato, Vania, Johnson, Mae, Johnson, Oscar, Johnson, Philip P., Johnson, Reagan, Josephson, Matthew P., Jung, Meen Chel, Just, Michael G., Kahilainen, Aapo, Kailing, Otto S., Karinho-Betancourt, Eunice, Karousou, Regina, Kirn, Lauren A., Kirschbaum, Anna, Laine, Anna-Liisa, LaMontagne, Jalene M., Lampei, Christian, Lara, Carlos, Larson, Erica L., Lazaro-Lobo, Adrian, Le, Jennifer H., Leandro, Deleon S., Lee, Christopher, Lei, Yunting, Leon, Carolina A., Tamara, Manuel E. Lequerica, Levesque, Danica C., Liao, Wan-Jin, Ljubotina, Megan, Locke, Hannah, Lockett, Martin T., Longo, Tiffany C., Lundholm, Jeremy T., MacGillavry, Thomas, Mackin, Christopher R., Mahmoud, Alex R., Manju, Isaac A., Marien, Janine, Martinez, D. Nayeli, Martinez-Bartolome, Marina, Meineke, Emily K., Mendoza-Arroyo, Wendy, Merritt, Thomas J. S., Merritt, Lila Elizabeth L., Migiani, Giuditta, Minor, Emily S., Mitchell, Nora, Bazargani, Mitra Mohammadi, Moles, Angela T., Monk, Julia D., Moore, Christopher M., Morales-Morales, Paula A., Moyers, Brook T., Munoz-Rojas, Miriam, Munshi-South, Jason, Murphy, Shannon M., Murua, Maureen M., Neila, Melisa, Nikolaidis, Ourania, Njunji, Iva, Nosko, Peter, Nunez-Farfan, Juan, Ohgushi, Takayuki, Olsen, Kenneth M., Opedal, Oystein H., Ornelas, Cristina, Parachnowitsch, Amy L., Paratore, Aaron S., Parody-Merino, Angela M., Paule, Juraj, Paulo, Octavio S., Pena, Joao Carlos, Pfeiffer, Vera W., Pinho, Pedro, Piot, Anthony, Porth, Ilga M., Poulos, Nicholas, Puentes, Adriana, Qu, Jiao, Quintero-Vallejo, Estela, Raciti, Steve M., Raeymaekers, Joost A. M., Raveala, Krista M., Rennison, Diana J., Ribeiro, Milton C., Richardson, Jonathan L., Rivas-Torres, Gonzalo, Rivera, Benjamin J., Roddy, Adam B., Rodriguez-Munoz, Erika, Roman, Jose Raul, Rossi, Laura S., Rowntree, Jennifer K., Ryan, Travis J., Salinas, Santiago, Sanders, Nathan J., Santiago-Rosario, Luis Y., Savage, Amy M., Scheepens, J. F., Schilthuizen, Menno, Schneider, Adam C., Scholier, Tiffany, Scott, Jared L., Shaheed, Summer A., Shefferson, Richard P., Shepard, Caralee A., Shykoff, Jacqui A., Silveira, Georgianna, Smith, Alexis D., Solis-Gabriel, Lizet, Soro, Antonella, Spellman, Katie, V, Whitney, Kaitlin Stack, Starke-Ottich, Indra, Stephan, Jorg G., Stephens, Jessica D., Szulc, Justyna, Szulkin, Marta, Tack, Ayco J. M., Tamburrino, Italo, Tate, Tayler D., Tergemina, Emmanuel, Theodorou, Panagiotis, Thompson, Ken A., Threlfall, Caragh G., Tinghitella, Robin M., Toledo-Chelala, Lilibeth, Tong, Xin, Uroy, Lea, Utsumi, Shunsuke, Vandegehuchte, Martijn L., VanWallendael, Acer, Vidal, Paula M., Wadgymar, Susana M., Wang, Ai-Ying, Wang, Nian, Warbrick, Montana L., Whitney, Kenneth D., Wiesmeier, Miriam, Wiles, J. Tristian, Wu, Jianqiang, Xirocostas, Zoe A., Yan, Zhaogui, Yao, Jiahe, Yoder, Jeremy B., Yoshida, Owen, Zhang, Jingxiong, Zhao, Zhigang, Ziter, Carly D., Zuellig, Matthew P., Zufall, Rebecca A., Zurita, Juan E., Zytynska, Sharon E., Johnson, Marc T. J., Santangelo, James S., Ness, Rob W., Cohan, Beata, Fitzpatrick, Connor R., Innes, Simon G., Koch, Sophie, Miles, Lindsay S., Munim, Samreen, Peres-Neto, Pedro R., Prashad, Cindy, Tong, Alex T., Aguirre, Windsor E., Akinwole, Philips O., Alberti, Marina, Alvarez, Jackie, Anderson, Jill T., Anderson, Joseph J., Ando, Yoshino, Andrew, Nigel R., Angeoletto, Fabio, Anstett, Daniel N., Anstett, Julia, Aoki-Goncalves, Felipe, Arietta, A. Z. Andis, Arroyo, Mary T. K., Austen, Emily J., Baena-Diaz, Fernanda, Barker, Cory A., Baylis, Howard A., Beliz, Julia M., Benitez-Mora, Alfonso, Bickford, David, Biedebach, Gabriela, Blackburn, Gwylim S., Boehm, Mannfred M. A., Bonser, Stephen P., Bonte, Dries, Bragger, Jesse R., Branquinho, Cristina, Brans, Kristien, I, Bresciano, Jorge C., Brom, Peta D., Bucharova, Anna, Burt, Briana, Cahill, James F., Campbell, Katelyn D., Carlen, Elizabeth J., Carmona, Diego, Castellanos, Maria Clara, Centenaro, Giada, Chalen, Izan, Chaves, Jaime A., Chavez-Pesqueira, Mariana, Chen, Xiao-Yong, Chilton, Angela M., Chomiak, Kristina M., Cisneros-Heredia, Diego F., Cisse, Ibrahim K., Classen, Aimee T., Comerford, Mattheau S., Fradinger, Camila Cordoba, Corney, Hannah, Crawford, Andrew J., Crawford, Kerri M., Dahirel, Maxime, David, Santiago, De Haan, Robert, Deacon, Nicholas J., Dean, Clare, Del-Val, Ek, Deligiannis, Eleftherios K., Denney, Derek, Dettlaff, Margarete A., DiLeo, Michelle F., Ding, Yuan-Yuan, Dominguez-Lopez, Moises E., Dominoni, Davide M., Draud, Savannah L., Dyson, Karen, Ellers, Jacintha, Espinosa, Carlos, I, Essi, Liliana, Falahati-Anbaran, Mohsen, Falcao, Jessica C. F., Fargo, Hayden T., Fellowes, Mark D. E., Fitzpatrick, Raina M., Flaherty, Leah E., Flood, Padraic J., Flores, Maria F., Fornoni, Juan, Foster, Amy G., Frost, Christopher J., Fuentes, Tracy L., Fulkerson, Justin R., Gagnon, Edeline, Garbsch, Frauke, Garroway, Colin J., Gerstein, Aleeza C., Giasson, Mischa M., Girdler, E. Binney, Gkelis, Spyros, Godsoe, William, Golemiec, Anneke M., Golemiec, Mireille, Gonzalez-Lagos, Cesar, Gorton, Amanda J., Gotanda, Kiyoko M., Granath, Gustaf, Greiner, Stephan, Griffiths, Joanna S., Grilo, Filipa, Gundel, Pedro E., Hamilton, Benjamin, Hardin, Joyce M., He, Tianhua, Heard, Stephen B., Henriques, Andre F., Hernandez-Poveda, Melissa, Hetherington-Rauth, Molly C., Hill, Sarah J., Hochuli, Dieter F., Hodgins, Kathryn A., Hood, Glen R., Hopkins, Gareth R., Hovanes, Katherine A., Howard, Ava R., Hubbard, Sierra C., Ibarra-Cerdena, Carlos N., Iniguez-Armijos, Carlos, Jara-Arancio, Paola, Jarrett, Benjamin J. M., Jeannot, Manon, Jimenez-Lobato, Vania, Johnson, Mae, Johnson, Oscar, Johnson, Philip P., Johnson, Reagan, Josephson, Matthew P., Jung, Meen Chel, Just, Michael G., Kahilainen, Aapo, Kailing, Otto S., Karinho-Betancourt, Eunice, Karousou, Regina, Kirn, Lauren A., Kirschbaum, Anna, Laine, Anna-Liisa, LaMontagne, Jalene M., Lampei, Christian, Lara, Carlos, Larson, Erica L., Lazaro-Lobo, Adrian, Le, Jennifer H., Leandro, Deleon S., Lee, Christopher, Lei, Yunting, Leon, Carolina A., Tamara, Manuel E. Lequerica, Levesque, Danica C., Liao, Wan-Jin, Ljubotina, Megan, Locke, Hannah, Lockett, Martin T., Longo, Tiffany C., Lundholm, Jeremy T., MacGillavry, Thomas, Mackin, Christopher R., Mahmoud, Alex R., Manju, Isaac A., Marien, Janine, Martinez, D. Nayeli, Martinez-Bartolome, Marina, Meineke, Emily K., Mendoza-Arroyo, Wendy, Merritt, Thomas J. S., Merritt, Lila Elizabeth L., Migiani, Giuditta, Minor, Emily S., Mitchell, Nora, Bazargani, Mitra Mohammadi, Moles, Angela T., Monk, Julia D., Moore, Christopher M., Morales-Morales, Paula A., Moyers, Brook T., Munoz-Rojas, Miriam, Munshi-South, Jason, Murphy, Shannon M., Murua, Maureen M., Neila, Melisa, Nikolaidis, Ourania, Njunji, Iva, Nosko, Peter, Nunez-Farfan, Juan, Ohgushi, Takayuki, Olsen, Kenneth M., Opedal, Oystein H., Ornelas, Cristina, Parachnowitsch, Amy L., Paratore, Aaron S., Parody-Merino, Angela M., Paule, Juraj, Paulo, Octavio S., Pena, Joao Carlos, Pfeiffer, Vera W., Pinho, Pedro, Piot, Anthony, Porth, Ilga M., Poulos, Nicholas, Puentes, Adriana, Qu, Jiao, Quintero-Vallejo, Estela, Raciti, Steve M., Raeymaekers, Joost A. M., Raveala, Krista M., Rennison, Diana J., Ribeiro, Milton C., Richardson, Jonathan L., Rivas-Torres, Gonzalo, Rivera, Benjamin J., Roddy, Adam B., Rodriguez-Munoz, Erika, Roman, Jose Raul, Rossi, Laura S., Rowntree, Jennifer K., Ryan, Travis J., Salinas, Santiago, Sanders, Nathan J., Santiago-Rosario, Luis Y., Savage, Amy M., Scheepens, J. F., Schilthuizen, Menno, Schneider, Adam C., Scholier, Tiffany, Scott, Jared L., Shaheed, Summer A., Shefferson, Richard P., Shepard, Caralee A., Shykoff, Jacqui A., Silveira, Georgianna, Smith, Alexis D., Solis-Gabriel, Lizet, Soro, Antonella, Spellman, Katie, V, Whitney, Kaitlin Stack, Starke-Ottich, Indra, Stephan, Jorg G., Stephens, Jessica D., Szulc, Justyna, Szulkin, Marta, Tack, Ayco J. M., Tamburrino, Italo, Tate, Tayler D., Tergemina, Emmanuel, Theodorou, Panagiotis, Thompson, Ken A., Threlfall, Caragh G., Tinghitella, Robin M., Toledo-Chelala, Lilibeth, Tong, Xin, Uroy, Lea, Utsumi, Shunsuke, Vandegehuchte, Martijn L., VanWallendael, Acer, Vidal, Paula M., Wadgymar, Susana M., Wang, Ai-Ying, Wang, Nian, Warbrick, Montana L., Whitney, Kenneth D., Wiesmeier, Miriam, Wiles, J. Tristian, Wu, Jianqiang, Xirocostas, Zoe A., Yan, Zhaogui, Yao, Jiahe, Yoder, Jeremy B., Yoshida, Owen, Zhang, Jingxiong, Zhao, Zhigang, Ziter, Carly D., Zuellig, Matthew P., Zufall, Rebecca A., Zurita, Juan E., Zytynska, Sharon E., and Johnson, Marc T. J.
- Abstract
Urbanization transforms environments in ways that alter biological evolution. We examined whether urban environmental change drives parallel evolution by sampling 110,019 white clover plants from 6169 populations in 160 cities globally. Plants were assayed for a Mendelian antiherbivore defense that also affects tolerance to abiotic stressors. Urban-rural gradients were associated with the evolution of clines in defense in 47% of cities throughout the world. Variation in the strength of clines was explained by environmental changes in drought stress and vegetation cover that varied among cities. Sequencing 2074 genomes from 26 cities revealed that the evolution of urban-rural dines was best explained by adaptive evolution, but the degree of parallel adaptation varied among cities. Our results demonstrate that urbanization leads to adaptation at a global scale.
- Published
- 2022
- Full Text
- View/download PDF
14. Global urban environmental change drives adaptation in white clover
- Author
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Santangelo, James S., primary, Ness, Rob W., additional, Cohan, Beata, additional, Fitzpatrick, Connor R., additional, Innes, Simon G., additional, Koch, Sophie, additional, Miles, Lindsay S., additional, Munim, Samreen, additional, Peres-Neto, Pedro R., additional, Prashad, Cindy, additional, Tong, Alex T., additional, Aguirre, Windsor E., additional, Akinwole, Philips O., additional, Alberti, Marina, additional, Álvarez, Jackie, additional, Anderson, Jill T., additional, Anderson, Joseph J., additional, Ando, Yoshino, additional, Andrew, Nigel R., additional, Angeoletto, Fabio, additional, Anstett, Daniel N., additional, Anstett, Julia, additional, Aoki-Gonçalves, Felipe, additional, Arietta, A. Z. Andis, additional, Arroyo, Mary T. K., additional, Austen, Emily J., additional, Baena-Díaz, Fernanda, additional, Barker, Cory A., additional, Baylis, Howard A., additional, Beliz, Julia M., additional, Benitez-Mora, Alfonso, additional, Bickford, David, additional, Biedebach, Gabriela, additional, Blackburn, Gwylim S., additional, Boehm, Mannfred M. A., additional, Bonser, Stephen P., additional, Bonte, Dries, additional, Bragger, Jesse R., additional, Branquinho, Cristina, additional, Brans, Kristien I., additional, Bresciano, Jorge C., additional, Brom, Peta D., additional, Bucharova, Anna, additional, Burt, Briana, additional, Cahill, James F., additional, Campbell, Katelyn D., additional, Carlen, Elizabeth J., additional, Carmona, Diego, additional, Castellanos, Maria Clara, additional, Centenaro, Giada, additional, Chalen, Izan, additional, Chaves, Jaime A., additional, Chávez-Pesqueira, Mariana, additional, Chen, Xiao-Yong, additional, Chilton, Angela M., additional, Chomiak, Kristina M., additional, Cisneros-Heredia, Diego F., additional, Cisse, Ibrahim K., additional, Classen, Aimée T., additional, Comerford, Mattheau S., additional, Fradinger, Camila Cordoba, additional, Corney, Hannah, additional, Crawford, Andrew J., additional, Crawford, Kerri M., additional, Dahirel, Maxime, additional, David, Santiago, additional, De Haan, Robert, additional, Deacon, Nicholas J., additional, Dean, Clare, additional, del-Val, Ek, additional, Deligiannis, Eleftherios K., additional, Denney, Derek, additional, Dettlaff, Margarete A., additional, DiLeo, Michelle F., additional, Ding, Yuan-Yuan, additional, Domínguez-López, Moisés E., additional, Dominoni, Davide M., additional, Draud, Savannah L., additional, Dyson, Karen, additional, Ellers, Jacintha, additional, Espinosa, Carlos I., additional, Essi, Liliana, additional, Falahati-Anbaran, Mohsen, additional, Falcão, Jéssica C. F., additional, Fargo, Hayden T., additional, Fellowes, Mark D. E., additional, Fitzpatrick, Raina M., additional, Flaherty, Leah E., additional, Flood, Pádraic J., additional, Flores, María F., additional, Fornoni, Juan, additional, Foster, Amy G., additional, Frost, Christopher J., additional, Fuentes, Tracy L., additional, Fulkerson, Justin R., additional, Gagnon, Edeline, additional, Garbsch, Frauke, additional, Garroway, Colin J., additional, Gerstein, Aleeza C., additional, Giasson, Mischa M., additional, Girdler, E. Binney, additional, Gkelis, Spyros, additional, Godsoe, William, additional, Golemiec, Anneke M., additional, Golemiec, Mireille, additional, González-Lagos, César, additional, Gorton, Amanda J., additional, Gotanda, Kiyoko M., additional, Granath, Gustaf, additional, Greiner, Stephan, additional, Griffiths, Joanna S., additional, Grilo, Filipa, additional, Gundel, Pedro E., additional, Hamilton, Benjamin, additional, Hardin, Joyce M., additional, He, Tianhua, additional, Heard, Stephen B., additional, Henriques, André F., additional, Hernández-Poveda, Melissa, additional, Hetherington-Rauth, Molly C., additional, Hill, Sarah J., additional, Hochuli, Dieter F., additional, Hodgins, Kathryn A., additional, Hood, Glen R., additional, Hopkins, Gareth R., additional, Hovanes, Katherine A., additional, Howard, Ava R., additional, Hubbard, Sierra C., additional, Ibarra-Cerdeña, Carlos N., additional, Iñiguez-Armijos, Carlos, additional, Jara-Arancio, Paola, additional, Jarrett, Benjamin J. M., additional, Jeannot, Manon, additional, Jiménez-Lobato, Vania, additional, Johnson, Mae, additional, Johnson, Oscar, additional, Johnson, Philip P., additional, Johnson, Reagan, additional, Josephson, Matthew P., additional, Jung, Meen Chel, additional, Just, Michael G., additional, Kahilainen, Aapo, additional, Kailing, Otto S., additional, Kariñho-Betancourt, Eunice, additional, Karousou, Regina, additional, Kirn, Lauren A., additional, Kirschbaum, Anna, additional, Laine, Anna-Liisa, additional, LaMontagne, Jalene M., additional, Lampei, Christian, additional, Lara, Carlos, additional, Larson, Erica L., additional, Lázaro-Lobo, Adrián, additional, Le, Jennifer H., additional, Leandro, Deleon S., additional, Lee, Christopher, additional, Lei, Yunting, additional, León, Carolina A., additional, Lequerica Tamara, Manuel E., additional, Levesque, Danica C., additional, Liao, Wan-Jin, additional, Ljubotina, Megan, additional, Locke, Hannah, additional, Lockett, Martin T., additional, Longo, Tiffany C., additional, Lundholm, Jeremy T., additional, MacGillavry, Thomas, additional, Mackin, Christopher R., additional, Mahmoud, Alex R., additional, Manju, Isaac A., additional, Mariën, Janine, additional, Martínez, D. Nayeli, additional, Martínez-Bartolomé, Marina, additional, Meineke, Emily K., additional, Mendoza-Arroyo, Wendy, additional, Merritt, Thomas J. S., additional, Merritt, Lila Elizabeth L., additional, Migiani, Giuditta, additional, Minor, Emily S., additional, Mitchell, Nora, additional, Mohammadi Bazargani, Mitra, additional, Moles, Angela T., additional, Monk, Julia D., additional, Moore, Christopher M., additional, Morales-Morales, Paula A., additional, Moyers, Brook T., additional, Muñoz-Rojas, Miriam, additional, Munshi-South, Jason, additional, Murphy, Shannon M., additional, Murúa, Maureen M., additional, Neila, Melisa, additional, Nikolaidis, Ourania, additional, Njunjić, Iva, additional, Nosko, Peter, additional, Núñez-Farfán, Juan, additional, Ohgushi, Takayuki, additional, Olsen, Kenneth M., additional, Opedal, Øystein H., additional, Ornelas, Cristina, additional, Parachnowitsch, Amy L., additional, Paratore, Aaron S., additional, Parody-Merino, Angela M., additional, Paule, Juraj, additional, Paulo, Octávio S., additional, Pena, João Carlos, additional, Pfeiffer, Vera W., additional, Pinho, Pedro, additional, Piot, Anthony, additional, Porth, Ilga M., additional, Poulos, Nicholas, additional, Puentes, Adriana, additional, Qu, Jiao, additional, Quintero-Vallejo, Estela, additional, Raciti, Steve M., additional, Raeymaekers, Joost A. M., additional, Raveala, Krista M., additional, Rennison, Diana J., additional, Ribeiro, Milton C., additional, Richardson, Jonathan L., additional, Rivas-Torres, Gonzalo, additional, Rivera, Benjamin J., additional, Roddy, Adam B., additional, Rodriguez-Muñoz, Erika, additional, Román, José Raúl, additional, Rossi, Laura S., additional, Rowntree, Jennifer K., additional, Ryan, Travis J., additional, Salinas, Santiago, additional, Sanders, Nathan J., additional, Santiago-Rosario, Luis Y., additional, Savage, Amy M., additional, Scheepens, J.F., additional, Schilthuizen, Menno, additional, Schneider, Adam C., additional, Scholier, Tiffany, additional, Scott, Jared L., additional, Shaheed, Summer A., additional, Shefferson, Richard P., additional, Shepard, Caralee A., additional, Shykoff, Jacqui A., additional, Silveira, Georgianna, additional, Smith, Alexis D., additional, Solis-Gabriel, Lizet, additional, Soro, Antonella, additional, Spellman, Katie V., additional, Whitney, Kaitlin Stack, additional, Starke-Ottich, Indra, additional, Stephan, Jörg G., additional, Stephens, Jessica D., additional, Szulc, Justyna, additional, Szulkin, Marta, additional, Tack, Ayco J. M., additional, Tamburrino, Ítalo, additional, Tate, Tayler D., additional, Tergemina, Emmanuel, additional, Theodorou, Panagiotis, additional, Thompson, Ken A., additional, Threlfall, Caragh G., additional, Tinghitella, Robin M., additional, Toledo-Chelala, Lilibeth, additional, Tong, Xin, additional, Uroy, Léa, additional, Utsumi, Shunsuke, additional, Vandegehuchte, Martijn L., additional, VanWallendael, Acer, additional, Vidal, Paula M., additional, Wadgymar, Susana M., additional, Wang, Ai-Ying, additional, Wang, Nian, additional, Warbrick, Montana L., additional, Whitney, Kenneth D., additional, Wiesmeier, Miriam, additional, Wiles, J. Tristian, additional, Wu, Jianqiang, additional, Xirocostas, Zoe A., additional, Yan, Zhaogui, additional, Yao, Jiahe, additional, Yoder, Jeremy B., additional, Yoshida, Owen, additional, Zhang, Jingxiong, additional, Zhao, Zhigang, additional, Ziter, Carly D., additional, Zuellig, Matthew P., additional, Zufall, Rebecca A., additional, Zurita, Juan E., additional, Zytynska, Sharon E., additional, and Johnson, Marc T. J., additional
- Published
- 2022
- Full Text
- View/download PDF
15. An Intact, But Dormant LTR Retrotransposon Defines a Moderately Sized Family in White Spruce (Picea glauca)
- Author
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Hamberger, Britta, Yuen, Macaire Man Saint, Buschiazzo, Emmanuel, Cullis, Claire, Yuen, Agnes, Ritland, Carol, Bohlmann, Jörg, Hamberger, Björn, Kole, Chittaranjan, Series Editor, Porth, Ilga M., editor, and De la Torre, Amanda R., editor
- Published
- 2020
- Full Text
- View/download PDF
16. Transposable Elements in Spruce
- Author
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Marturano, Giovanni, Canovi, Camilla, Rossi, Federico, Zuccolo, Andrea, Kole, Chittaranjan, Series Editor, Porth, Ilga M., editor, and De la Torre, Amanda R., editor
- Published
- 2020
- Full Text
- View/download PDF
17. Back to BACs: Conifer Genome Exploration with Bacterial Artificial Chromosomes
- Author
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Ritland, Kermit, Farzaneh, Nima, Cullis, Claire, Yuen, Agnes, Tang, Michelle, Fillon, Joël, Chao, Sarah, Peterson, Daniel G., Ritland, Carol, Kole, Chittaranjan, Series Editor, Porth, Ilga M., editor, and De la Torre, Amanda R., editor
- Published
- 2020
- Full Text
- View/download PDF
18. Comparative Genomics of Spruce and Other Gymnosperms
- Author
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De la Torre, Amanda R., Kole, Chittaranjan, Series Editor, Porth, Ilga M., editor, and De la Torre, Amanda R., editor
- Published
- 2020
- Full Text
- View/download PDF
19. Drought Stress Adaptation in Norway Spruce and Related Genomics Work
- Author
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Klápště, Jaroslav, Lecoy, Jonathan, del Rosario García-Gil, María, Kole, Chittaranjan, Series Editor, Porth, Ilga M., editor, and De la Torre, Amanda R., editor
- Published
- 2020
- Full Text
- View/download PDF
20. The Pliable Genome: Epigenomics of Norway Spruce
- Author
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Yakovlev, Igor, Viejo, Marcos, Fossdal, Carl Gunnar, Kole, Chittaranjan, Series Editor, Porth, Ilga M., editor, and De la Torre, Amanda R., editor
- Published
- 2020
- Full Text
- View/download PDF
21. Variant Calling Using Whole Genome Resequencing and Sequence Capture for Population and Evolutionary Genomic Inferences in Norway Spruce (Picea Abies)
- Author
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Bernhardsson, Carolina, Wang, Xi, Eklöf, Helena, Ingvarsson, Pär K., Kole, Chittaranjan, Series Editor, Porth, Ilga M., editor, and De la Torre, Amanda R., editor
- Published
- 2020
- Full Text
- View/download PDF
22. Sequencing and Assembling the Nuclear and Organelle Genomes of North American Spruces
- Author
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Birol, Inanc, De la Torre, Amanda R., Kole, Chittaranjan, Series Editor, Porth, Ilga M., editor, and De la Torre, Amanda R., editor
- Published
- 2020
- Full Text
- View/download PDF
23. Spruce Phenolics: Biosynthesis and Ecological Functions
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Hammerbacher, Almuth, Wright, Louwrance P., Gershenzon, Jonathan, Kole, Chittaranjan, Series Editor, Porth, Ilga M., editor, and De la Torre, Amanda R., editor
- Published
- 2020
- Full Text
- View/download PDF
24. Local Adaptation in the Interior Spruce Hybrid Complex
- Author
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Degner, Jonathan, Kole, Chittaranjan, Series Editor, Porth, Ilga M., editor, and De la Torre, Amanda R., editor
- Published
- 2020
- Full Text
- View/download PDF
Catalog
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