21 results on '"Poyraz, Ö."'
Search Results
2. Effects of hen production cycle and egg weight on egg quality and composition, hatchability, duckling quality, and first-week body weight in Pekin ducks
- Author
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Onbaşılar, E.E., Erdem, E., Poyraz, Ö., and Yalçın, S.
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- 2011
- Full Text
- View/download PDF
3. Prevalence of hepatitis B and C virus infection in barbers in the Sivas region of Turkey
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Candan, F., Alagözlü, H., Poyraz, Ö., and Sümer, H.
- Published
- 2002
4. Investigation of vectors for Borrelia burgdorferi and Lyme seropositivity in sivas region [Sivas yöresinde Borrelia burgdorferi vektörlerinin ve Lyme seropozitifli?inin araştirilmasi]
- Author
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Güneş T., Poyraz Ö., Kaya S., Gençer L., Alim A., and Güneş, T., Cumhuriyet Universitesi, Saglik Hizmetleri Meslek Yuksekokulu, Sivas, Turkey -- Poyraz, Ö., Cumhuriyet Universitesi, Tp Fakultesi, Mikrobiyoloji ve Klinik Mikrobiyoloji Anabilim Dal, Sivas, Turkey -- Kaya, S., Cumhuriyet Universitesi, Tp Fakultesi, Mikrobiyoloji ve Klinik Mikrobiyoloji Anabilim Dal, Sivas, Turkey -- Gençer, L., Cumhuriyet Universitesi, Fen-Edebiyat Fakultesi, Biyoloji Bolumu, Sivas, Turkey -- Alim, A., Sivas Il Halk Saägli?i Müdürlü?ü, Sivas, Turkey
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Borrelia burgdorferi ,Lyme disease ,bacterial infections and mycoses ,Seroposivity ,Tick - Abstract
The aims of this study were to investigate the presence of vector ticks for Borrelia burgdorferi and to determine the seropositivity of lyme disease in Sivas region of Middle Anatolia. A total of 10.303 ticks were collected and classified at genus level, however, none of them belonged to Ixodes genus, the vector of B.burgdorferi. For the seroepidemiological study, serum samples were collected from 270 subjects who inhabited in rural area and raised livestock, and from 135 subjects as the control group who inhabited in urban area and have no livestock story. The samples were screened for the presence of B.burgdorferi IgG antibodies with a commercial enzyme immunoassay kit (ImmunoWell Borrelia, Genbio, San Diego). As a result, one subject in the each group (0.4% and 0.7%, respectively) yielded positive result, however as these sera gave positive reaction in rapid plasma reagin (RPR) test, these were evaluated as cross-reactivity (false positivity). These results indicated that lyme disease is not endemic in our region since neither Ixodes genus ticks nor seropositive subjects were detected.
- Published
- 2005
5. Investigation of Legionella pneumophila in thermal pools of the hot springs in the Central Anatolia Region of Turkey [İç Anadolu Bölgesi?nde bulunan kaplicalarin termal havuz sularinda Legionella pneumophila araştirmasi]
- Author
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Alim A., Hakgüdener Y., Poyraz Ö., and Alim, A., Il Halk Sagligi Laboratuvari, Sivas, Turkey -- Hakgüdener, Y., Cumhuriyet Universitesi, Tip Fakültesi, Klinik Mikrobiyoloji Anabilim Dali, Sivas, Turkey -- Poyraz, Ö., Cumhuriyet Universitesi, Tip Fakültesi, Klinik Mikrobiyoloji Anabilim Dali, Sivas, Turkey
- Subjects
Legionnaires' disease ,Hot spring ,Thermal pool ,bacterial infections and mycoses ,Legionella pneumophila - Abstract
Microbiological contamination of hot spring waters is a public health problem, and hot spring waters have been thought to be a potential source of Legionella infections. In this study, 209 water samples collected from 69 thermal pools of 36 hot springs in the Central Anatolia Region were examined for the presence of Legionella spp. between September and November 2001. The Water samples were concentrated via filtration, and the filtrates were decontaminated by low-ph method. Then the samples were cultured on non-selective (Buffered Charcoal Yeast Extract Agar, BCYE) and selective (GVPC; BCYE supplemented with glycine, vancomycin, polymyxin B, cycloheximide, and MWY; BCYE supplemented with glycine, anisomycin, polymyxin B, vancomycin, bromthymol blue, bromcresole purple) media, and suspected colonies were confirmed by Legionella Latex Kit (Oxoid) and direct fluorescent antibody test. As a result, 24 out of 209 (11.5%) water samples were found positive for Legionella pneumophila, and a total 26 L. pneumophila strains were isolated from these 24 samples. Two of these isolates were found reactive with serogroup 1, 20 were reactive with serogroup 2-14 antisera in agglutination test, while 2 samples collected from the same thermal pool, have yielded 2 strains, of which one was serogroup 1 and the other was serogroup 2-14. L. pneumophila was detected in 22.2% of hot springs (8 of 36) and 14.5% of thermal pools (10 of 69). L. pneumophila concentrations which were detected in water samples ranged from 10 to 430 CFU/100ml. This is the first data for the prevalence of Legionnaires' disease agent in hot spring spas in the Central Anatolia Region of Turkey. Colonization of bacterium in some spas indicates that the certain hot springs might be endemic focuses for Legionnaires' disease in our country.
- Published
- 2002
6. The histopathological and morphometric investigation of the effects of systemically administered humic acid on alveolar bone loss in ligature-induced periodontitis in rats
- Author
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Çalışır, M., primary, Akpınar, A., additional, Poyraz, Ö., additional, Göze, F., additional, and Çınar, Z., additional
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- 2015
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7. Effect of Different Housing Systems on Growth and Welfare of Pekin Ducks
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Erisir, Z., Poyraz, Ö, Onbasilar, E. E., EVREN ERDEM, Kandemir, Ö, and Kırıkkale Üniversitesi
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swimming pool ,welfare ,duck ,outside activity ,Intensive housing system - Abstract
Onbasilar, Ebru/0000-0002-1321-0280; ERISIR, Zeki/0000-0003-0420-023X WOS: 000264104700007 The aim of this study was to investigate the effect of different housing systems on growth and welfare of Pekin ducks. A total of 420 (212 male, 208 female) one-day-old ducklings were used in this study. The ducklings were randomly divided into 4 treatment groups; 2 Intensive Systems (IS) (one without pool and the other with swimming pool) and 2 intensive systems with outside activity (IOS) (one with swimming pool and the other without pool). The IOS with swimming pool was found to influence the body weight at 6 weeks of age. Body weight at 6 weeks of age was lower in ducks reared in IOS with pool than those reared in IOS without pool. Feed consumption was the highest and also feed efficiency was the lowest in ducks reared in IS without pool. The differences between the groups in terms of values for immune response, H-L ratio, plasma corticosterone, cholesterol, glucose and triglyceride levels were not statistically significant. It is concluded that although, the most common system used for duck rearing worldwide is IS without pool, the findings of the present study indicate that IOS with swimming pool is the best system in terms of duck welfare and growth.
- Published
- 2009
8. The Changes of the Body Weight and Some Blood Parameters of Pekin Ducklings Dependent on Transportation Duration
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Erişir, Z., Poyraz, Ö, Erişir, M., Onbaşilar, E. E., EVREN ERDEM, and Kırıkkale Üniversitesi
- Subjects
transportation ,body weight ,some blood parameters ,Pekin ducklings - Abstract
Onbasilar, Ebru/0000-0002-1321-0280; ERISIR, Zeki/0000-0003-0420-023X; Erisir, Mine/0000-0001-6209-4792 WOS: 000262562100003 The effect of transportation on body weight and some blood parameters of hatching Pekin ducklings were investigated. A total of 500 (250 male, 250 female) 1 day-old ducklings (Star 52-Grimaud Freres) were obtained from a commercial hatchery. Upon hatching and on the 4, 8 and 12 h of the transportation, each duckling was weighed to determine their body weights. Before transportation and on the 4, 8 and 12 h of the transportation, necks of 10 male and 10 female ducklings were broken and blood samples were taken. Plasma corticosterone, glucose, cholesterol, triglyceride, AST (Aspartate transaminase), CK (Creatine kinase), total protein, albumin levels and blood H/L (heterophile/lymphocyte) ratios were determined. The body weights, which were 46.1 and 45.7 g for hatching male and female ducklings, fell down to 41.3 and 41.5 g at the end of transportation. During transportation, a total of 4 ducklings died; 1 male and 1 female on the 8 h, 1 male and 1 female on the 12 h. Plasma glucose levels of ducklings decreased up to 8 h of transportation, but increased at 12 h. Plasma corticosterone, cholesterol, triglyceride, AST, total protein, albumin levels and blood H/L ratios increased in transported ducklings due to increasing transportation time.
- Published
- 2008
9. Influence of lighting periods and stocking densities on performance, carcass characteristics and some stress parameters in broilers
- Author
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Onbaşilar, E. E., Poyraz, Ö, EVREN ERDEM, Öztürk, H., and Kırıkkale Üniversitesi
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stress ,animal structures ,Broiler ,stocking density ,lighting period - Abstract
Ozturk, Hakan/0000-0003-2913-2069; Onbasilar, Ebru/0000-0002-1321-0280 WOS: 000261440200001 This study was undertaken to investigate the effects of lighting and stocking density on performance, carcass characteristics and some stress parameters (H-L ratio, serum glucose, cholesterol and triglyceride levels, tonic immobility test (TI), antibody production, relative asymmetry (RA) and external appearances). Four hundred and seventy day-old male broiler chicks (Ross 308) were obtained from a commercial hatchery. The chicks were randomly distributed into two light proof controlled rooms. In one room the lighting period remained at continuous lighting (24 L: OD) during the whole experiment, while in the other room the photoperiod was 16 h light and 8 h dark per day. Each lighting group was divided into two stocking density groups (11.9 b/m(2) (average 29.9 kg of BW/m(2)) and 17.5 b/m(2) (average 40.7 kg of BW/m(2))) with 5 replications per group. Lighting program did not influence slaughter weight, body weight gain, feed consumption, feed to gain ratio, carcass characteristics, percentage of abdominal fat, heart, gizzard, liver, spleen and bursa of Fabricius, RA of metatarsus length, RA of tarsometatarsus length and thickness, mean RA, claw length, foot health, serum glucose, cholesterol and triglyceride levels anti-SRBC and anti NDV titers. TI duration (p < 0.001), feather condition (p < 0.001) and H-L ratio (p < 0.05) of broilers were significantly different in lighting groups. TI duration was 255 and 431 s, feather condition was 16.3 and 14.5 and H-L ratio was 1.0 and 1.2 in broilers exposed to 16L:8D lighting program and 24L:OD lighting program, respectively. Stocking density influenced final body weight (p < 0.001), body weight gain (p < 0.001), feed consumption (p < 0.05) and feed to gain ratio (p < 0.05). Final body weight was 2515 and 2326 g, feed consumption was 3829 and 3662 g and feed to gain ratio was found 1.55 and 1.61 g/g in broilers reared at 11.9 b/m(2) and 17.5 b/m(2), respectively. Feather condition (p < 0.001) and foot health (p < 0.01) were significantly different in stocking density groups. Feather condition was 16.5 and 14.3 and foot health was 3.6 and 3.0 in broilers reared at 11.9 and 17.5 b/m(2), respectively. Percentage of heart (p < 0.05), TI duration (p < 0.001), H-L ratio (p < 0.001), serum glucose (p < 0.001) and serum cholesterol levels (p < 0.05) were statistically higher in broilers reared at 17.5 b/m(2) than in broilers reared at 11.9 b/m(2). In conclusion darkness period and stocking density play an important role in modern broiler rearing. Ankara University Research FundAnkara University [20070810005HPD] This study was supported by Ankara University Research Fund (Project No. 20070810005HPD). We thank the Beypilic for supplying chicks to us.
- Published
- 2008
10. The histopathological and morphometric investigation of the effects of systemically administered humic acid on alveolar bone loss in ligature-induced periodontitis in rats.
- Author
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Çalışır, M., Akpınar, A., Poyraz, Ö., Göze, F., and Çınar, Z.
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THERAPEUTICS ,INFLAMMATION prevention ,GINGIVA ,ALVEOLAR process ,ANIMAL experimentation ,BIOLOGICAL models ,BONE resorption ,CARBOXYLIC acids ,DENTAL plaque ,ENZYME-linked immunosorbent assay ,HISTOLOGICAL techniques ,INFLAMMATION ,INTERLEUKINS ,MEDICAL schools ,MICROSCOPY ,PERIODONTITIS ,PHENOLS ,RATS ,RESEARCH funding ,SOILS ,DATA analysis software ,OSTEOBLASTS ,DESCRIPTIVE statistics ,IN vitro studies ,MANN Whitney U Test ,KRUSKAL-Wallis Test ,ANATOMY ,PREVENTION - Abstract
Background Humic acid is a soil extract found widely around the world. This product includes some trace elements important for human's health. The purpose of this study was to evaluate the morphometric and histopathological changes associated with an experimental periodontitis model in rats in response to systemic administration of humic acid. Material and Methods Thirty-eight male Wistar rats were divided into five experimental groups: non-ligated ( NL, n = 6) group; ligature-only ( LO, n = 8) group; ligature + systemic administration of humic acid (20, 80 and 150 mg/kg body weight per day for 15 d respectively) (S-20, S-80 and S-150) groups. 4/0 silk ligatures were placed at the gingival margin of lower first molars of the mandibular quadrant. The animals were killed at the end of 15 d. Changes in alveolar bone levels were clinically measured, using a stereomicroscope (× 25), as the distance from the cementoenamel junction to the alveolar bone crest. Tissues were histopathologically examined to assess the differences of osteoclast numbers, osteoblastic activity and inflammatory cell infiltration among the study groups. Enzyme-linked immunosorbent assay interleukin ( IL)-1β and IL-10 levels in serum and gingival homogenates were evaluated. Results At the end of 15 d, the alveolar bone loss was significantly higher in the LO group compared to the NL, S-80 and S-150 groups ( p < 0.05). In addition, the alveolar bone loss in the S-80 group was significantly lower than the LO and S-20 groups ( p < 0.05). The osteoblastic activity in the S-80 and S-150 groups was significantly higher than the other groups ( p < 0.05). The osteoclast number in the LO group was significantly higher than the NL, S-80 and S-150 groups ( p < 0.05). Inflammatory cell infiltration was significantly higher in LO and S-20 groups than the other groups ( p < 0.05). The highest serum and gingival homogenate IL-10 levels were determined in the S-80 group ( p < 0.05). The serum and gingival homogenate IL-1β levels in the LO group were significantly higher than the other groups ( p < 0.05). Both 80 and 150 mg/kg dosages of humic acid significantly reduced the periodontitis-related bone loss and inflammation, but the differences between these two groups were not statistically significant ( p > 0.05). Conclusions Within the limits of this study, it can be suggested that humic acid, when administered systemically as an 80 mg/kg dose, may prevent alveolar bone loss and reduce inflammation in the rat model. [ABSTRACT FROM AUTHOR]
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- 2016
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11. Effects of Breeder Age and Stocking Density on Performance, Carcass Characteristics and Some Stress Parameters of Broilers
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Onbaşılar, E. E., primary, Poyraz, Ö., additional, and Çetin, S., additional
- Published
- 2008
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12. Effects of egg storage period on hatching egg quality, hatchability, chick quality and relative growth in Pekin ducks
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Onbaşilar, E. E., Poyraz, Ö, and EVREN ERDEM
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storage period ,Pekin Duck ,embryonic structures ,relative growth ,egg quality ,hatching egg ,hatchability - Abstract
Onbasilar, Ebru/0000-0002-1321-0280 WOS: 000249218800007 A total of 864 incubating eggs produced by a Pekin duck breeder flock (Star 52- Grimaud Freres) were used to determine effects of different storage periods (0, 3, 7, 11 d) on egg quality, hatchability, duckling quality and relative growth (RG) at the end of 7 d rearing. Egg albumen index and Haugh unit were decreased, egg albumen pH and yolk pH were increased by length of egg storage period. Hatchability was decreased and early embryonic death was increased from eggs stored for 11 d. Egg weight loss, apparent fertility, middle and late embryonic death were not significantly affected by storage. Duck eggs stored for 0 and 3 d increased hatchability results and RG of ducklings. The percentage of ducklings with quality score of 100 was lower in eggs stored for 11 d (P
13. Residual stress and distortion model in direct metal laser sintering process
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Kundakcioglu, E., ismail lazoglu, Poyraz, Ö, Yasa, E., and Cizioglu, N.
14. The Effect of Ozone Gas on IL-1 beta and IL-10 Levels of Gingival Crevicular Fluid in Aggressive Periodontitis Patients
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Ömer Poyraz, Bilal Ege, Ebru Dumlupınar, Metin Çalişir, Ahmet Cemil Talmaç, and Çalışır, M., Department of Periodontology, Faculty of Dentistry, Adiyaman University, Adiyaman, Turkey -- Talmac, A.C., Department of Periodontology, Faculty of Dentistry, Yuzuncu Yil University, Van, Turkey -- Ege, B., Department of Oral and Maxillofacial Surgery, Faculty of Dentistry, Adiyaman University, Adiyaman, Turkey -- Poyraz, Ö., Department of Microbiology, Faculty of Medicine, Cumhuriyet University, Sivas, Turkey -- Dumlupınar, E., Department of Biostatistics, Faculty of Medicine, Adiyaman University, Adiyaman, Turkey
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medicine.medical_specialty ,Environmental Engineering ,Ozone ,02 engineering and technology ,010501 environmental sciences ,01 natural sciences ,Gastroenterology ,environment and public health ,Crevicular fluid ,chemistry.chemical_compound ,020401 chemical engineering ,Internal medicine ,medicine ,Environmental Chemistry ,Aggressive periodontitis ,0204 chemical engineering ,0105 earth and related environmental sciences ,clinical periodontal parameters ,business.industry ,Ozone therapy ,medicine.disease ,Clinical trial ,Interleukin 10 ,ozone ,chemistry ,IL-10 ,IL-1? ,business - Abstract
Although the use of ozone therapy in dentistry has become widespread, the number of controlled clinical trials evaluating its effectiveness in periodontal therapy is limited. The aim of this study was to evaluate the efficacy of ozone treatment, that is used in concert with scaling and root planning (SRP), on clinical periodontal parameters and to analyze its effect on cytokine levels of GCF in aggressive periodontitis patients. Totally, 27 patients with aggressive periodontitis were randomly selected into groups of treatment with either subgingival SRP followed by application of ozone with a periodontal probe (SRP+ozone) or subgingival SRP followed by irrigation with serum irrigation (SRP-control). The following parameters were evaluated at baseline (T0), and 6 weeks (T1): plaque index (PI); gingival index (GI); probing pocket depth (PPD), clinical attachment loss (CAL), GCF volume, GCF Interleukin-1? (IL-1?), and GCF Interleukin-10 (IL-10) cytokine levels. There was a significant difference in terms of clinical periodontal parameters before and after treatment in both groups. When comparing between groups, there was no significant difference between the treatment methods after 6 weeks with respect to the PI, PPD, CAL, and GCF IL-10 levels. In contrast, GI, GCF volume, and GCF IL-1? levels were statistically significantly different between the two groups at the 6th week after treatment. Application of ozone as an adjunctive therapy to SRP was shown to provide a statistically significant improvement in treatment results compared to SRP plus serum irrigation. © 2019, © 2019 International Ozone Association.
- Published
- 2019
15. Humic Acid, a Polyphenolic Substance, Decreases Alveolar Bone Loss in Experimental Periodontitis in Rats.
- Author
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Çalışır M, Akpınar A, Poyraz Ö, Göze F, and Çınar Z
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- Animals, Ligation veterinary, Osteoclasts, Rats, Rats, Wistar, Alveolar Bone Loss veterinary, Periodontitis veterinary
- Abstract
The purpose of this study was to evaluate the biochemical, morphometric, and histopathological changes associated with experimental periodontitis in rats in response to local administration of humic acid. Thirty-eight Wistar rats were divided into 5 experimental groups: nonligated (NL) group, ligature-only (LO) group, and ligature + local administration of humic acid (20, 80, and 150 mg/kg body weight per day for 15 days, respectively; L-20, L-80, and L-150 groups). Changes in alveolar bone levels were clinically measured as the distance from the cementoenamel junction to the alveolar bone crest with a stereomicroscope. Tissues were histopathologically examined to assess the osteoclast numbers, osteoblastic activity, and inflammatory cell infiltration among the study groups. Enzyme-linked immunosorbent assay interleukin1β (IL-1β) and IL-10 levels in serum and gingival homogenates were evaluated. At the end of 15 days, the alveolar bone loss was significantly higher in the LO group compared to the NL, L-20, and L-150 groups ( P < .05). The osteoclast number in the LO group was significantly higher than the NL, L-20, and L-150 groups ( P < .05). Inflammatory cell infiltration was significantly higher in the LO and L-80 groups than the other groups ( P < .05). The highest serum and gingival homogenate IL-10 levels were determined in the NL group ( P < .05). The serum and gingival homogenate IL-1β levels in LO group were significantly higher than the NL, L-20, and L-150 groups ( P < .05). Within the limits of this study, it can be suggested that humic acid, when administered locally at 20 and 80 mg/kg doses, may prevent alveolar bone loss in the rat model.
- Published
- 2019
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16. Serosurvey of Coxiella burnetii in high risk population in Turkey, endemic to Crimean-Congo haemorrhagic fever virus.
- Author
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Erturk R, Poyraz Ö, and Güneş T
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- Adolescent, Adult, Aged, Aged, 80 and over, Animals, Antibodies, Viral blood, Child, Endemic Diseases statistics & numerical data, Enzyme-Linked Immunosorbent Assay, Female, Hemorrhagic Fever Virus, Crimean-Congo immunology, Hemorrhagic Fever, Crimean virology, Humans, Male, Middle Aged, Risk Factors, Rural Population statistics & numerical data, Tick Bites microbiology, Tick Bites prevention & control, Tick Bites virology, Ticks microbiology, Ticks virology, Turkey epidemiology, Young Adult, Zoonoses microbiology, Antibodies, Bacterial blood, Coxiella burnetii immunology, Hemorrhagic Fever, Crimean epidemiology, Seroepidemiologic Studies, Zoonoses epidemiology
- Abstract
Background & Objectives: Q fever caused by Coxiella burnetii is a zoonotic infection that spreads to human beings from animals. This study was aimed to demographically examine the C. burnetii seroprevalence in the people living in villages where Crimean-Congo haemorrhagic fever virus (CCHFV) is endemic, in terms of various risk factors such as tick bites, tick contact, and occupational groups., Methods: A total of 440 serum samples from those living in rural areas of Sivas and Tokat regions in Turkey were included in the study as a risk group; 387of them were serologically CCHFV positive (as confirmed in our previous research). Serums of the control group composed of 110 people living in urban areas. In all serum samples, IgG antibodies of C. burnetii against phase-I and phase-II antigens were diagnosed using the ELISA method., Results: Coxiella burnetii seropositivity was detected in 19.09% of those living in rural areas and 4.55% of those living in urban areas (p < 0.001, OR = 4.96). In terms of their approach to the ticks, no statistical difference was observed between the risk groups in the chi-square test (p = 0.787). However, according to univariate analysis, the absorbance means of antibodies reactive to C. burnetii was statistically higher for the rural people who have made contact with ticks than those who have not (p = 0.017). No seroepidemiological relation was found between CCHFV and C. burnetii serology (p = 0.787), and the rate of co-seropositivity between them was 5.43% (21/387)., Interpretation & Conclusion: The findings of the study showed that C. burnetii infection is epidemic especially in the people living in rural areas. Contact with ticks in various ways might have resulted in the increased risk of C. burnetii infection in the study. Personal protective measures against tick bites may be important for reducing Q fever risk as in other tick-borne infectious disease., Competing Interests: There is no conflict of interest in this study.
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- 2017
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17. Investigating the Effects of Systemically Administered Strontium Ranelate on Alveolar Bone Loss Histomorphometrically and Histopathologically on Experimental Periodontitis in Rats.
- Author
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Karakan NC, Akpınar A, Göze F, and Poyraz Ö
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- Alkaline Phosphatase metabolism, Alveolar Bone Loss pathology, Animals, Biomarkers metabolism, Disease Models, Animal, Enzyme-Linked Immunosorbent Assay, Interleukin-1beta metabolism, Male, Osteoclasts metabolism, Osteoprotegerin metabolism, Periodontitis pathology, RANK Ligand metabolism, Random Allocation, Rats, Rats, Wistar, Thiophenes administration & dosage, Alveolar Bone Loss prevention & control, Periodontitis prevention & control, Thiophenes pharmacology
- Abstract
Background: The aim of this study is to investigate effects of strontium ranelate (SR) on alveolar bone loss (ABL) in rats with experimental periodontitis., Methods: Forty Wistar rats were randomly divided into five groups: 1) control (n = 8); 2) ligated (n = 8); 3) 300 mg/kg SR (SR300, n = 8); 4) 625 mg/kg SR (SR625, n = 8); and 5) 900 mg/kg SR (SR900, n = 8). To create experimental periodontitis, 4/0 silk ligatures were inserted submarginally around first molars at the right mandible. After 11 days, rats were sacrificed. ABL was calculated by measuring cemento-enamel junction and alveolar crest distance. Interleukin (IL)-1β, osteoprotegerin (OPG), and bone-specific alkaline phosphatase (BALP) serum levels were determined by enzyme-linked immunosorbent assay. Histopathologic analysis was used to evaluate inflammatory cell infiltration, numbers of osteoblasts and osteoclasts, and receptor activator of nuclear factor-kappa B ligand (RANKL) activity., Results: ABL was significantly lower in SR900 group than in the ligated group (P <0.05). Osteoclast numbers in ligated group were significantly higher than in the control, SR300, and SR900 groups (P <0.05). In ligated, SR625, and SR900 groups, significantly higher osteoblast numbers were detected than in control group (P <0.05). Osteoblast numbers in SR625 group were significantly higher than in the SR300 group (P <0.05). RANKL activities in SR900 and control groups were close to each other (P >0.05). Serum IL-1β, OPG, and BALP levels revealed no significant difference (P >0.05)., Conclusion: It can be concluded that SR can reduce RANKL activity and osteoclast numbers, as well as ABL.
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- 2017
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18. Inhibitors of the Cysteine Synthase CysM with Antibacterial Potency against Dormant Mycobacterium tuberculosis.
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Brunner K, Maric S, Reshma RS, Almqvist H, Seashore-Ludlow B, Gustavsson AL, Poyraz Ö, Yogeeswari P, Lundbäck T, Vallin M, Sriram D, Schnell R, and Schneider G
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- Animals, Anti-Bacterial Agents chemical synthesis, Anti-Bacterial Agents chemistry, Cell Line, Cysteine Synthase metabolism, Dose-Response Relationship, Drug, Enzyme Inhibitors chemical synthesis, Enzyme Inhibitors chemistry, Humans, Mice, Microbial Sensitivity Tests, Models, Molecular, Molecular Structure, Mycobacterium tuberculosis enzymology, Structure-Activity Relationship, Anti-Bacterial Agents pharmacology, Cysteine Synthase antagonists & inhibitors, Enzyme Inhibitors pharmacology, Mycobacterium tuberculosis drug effects
- Abstract
Cysteine is an important amino acid in the redox defense of Mycobacterium tuberculosis, primarily as a building block of mycothiol. Genetic studies have implicated de novo cysteine biosynthesis in pathogen survival in infected macrophages, in particular for persistent M. tuberculosis. Here, we report on the identification and characterization of potent inhibitors of CysM, a critical enzyme in cysteine biosynthesis during dormancy. A screening campaign of 17 312 compounds identified ligands that bind to the active site with micromolar affinity. These were characterized in terms of their inhibitory potencies and structure-activity relationships through hit expansion guided by three-dimensional structures of enzyme-inhibitor complexes. The top compound binds to CysM with 300 nM affinity and displays selectivity over the mycobacterial homologues CysK1 and CysK2. Notably, two inhibitors show significant potency in a nutrient-starvation model of dormancy of Mycobacterium tuberculosis, with little or no cytotoxicity toward mammalian cells.
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- 2016
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19. Crystal structures of the kinase domain of the sulfate-activating complex in Mycobacterium tuberculosis.
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Poyraz Ö, Brunner K, Lohkamp B, Axelsson H, Hammarström LG, Schnell R, and Schneider G
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- Adenosine Phosphosulfate metabolism, Adenosine Triphosphate metabolism, Amino Acid Sequence, Catalytic Domain, Molecular Sequence Data, Nucleotides metabolism, Peptides metabolism, Phosphoadenosine Phosphosulfate metabolism, Protein Structure, Tertiary, Sequence Alignment, Sulfate Adenylyltransferase chemistry, Sulfate Adenylyltransferase metabolism, Mycobacterium tuberculosis chemistry, Mycobacterium tuberculosis metabolism, Peptides chemistry, Phosphotransferases (Alcohol Group Acceptor) chemistry, Phosphotransferases (Alcohol Group Acceptor) metabolism, Sulfates metabolism
- Abstract
In Mycobacterium tuberculosis the sulfate activating complex provides a key branching point in sulfate assimilation. The complex consists of two polypeptide chains, CysD and CysN. CysD is an ATP sulfurylase that, with the energy provided by the GTPase activity of CysN, forms adenosine-5'-phosphosulfate (APS) which can then enter the reductive branch of sulfate assimilation leading to the biosynthesis of cysteine. The CysN polypeptide chain also contains an APS kinase domain (CysC) that phosphorylates APS leading to 3'-phosphoadenosine-5'-phosphosulfate, the sulfate donor in the synthesis of sulfolipids. We have determined the crystal structures of CysC from M. tuberculosis as a binary complex with ADP, and as ternary complexes with ADP and APS and the ATP mimic AMP-PNP and APS, respectively, to resolutions of 1.5 Å, 2.1 Å and 1.7 Å, respectively. CysC shows the typical APS kinase fold, and the structures provide comprehensive views of the catalytic machinery, conserved in this enzyme family. Comparison to the structure of the human homolog show highly conserved APS and ATP binding sites, questioning the feasibility of the design of specific inhibitors of mycobacterial CysC. Residue Cys556 is part of the flexible lid region that closes off the active site upon substrate binding. Mutational analysis revealed this residue as one of the determinants controlling lid closure and hence binding of the nucleotide substrate.
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- 2015
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20. Discovery of novel inhibitors targeting the Mycobacterium tuberculosis O-acetylserine sulfhydrylase (CysK1) using virtual high-throughput screening.
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Jean Kumar VU, Poyraz Ö, Saxena S, Schnell R, Yogeeswari P, Schneider G, and Sriram D
- Subjects
- Drug Design, Enzyme Inhibitors chemistry, High-Throughput Screening Assays methods, Humans, Microbial Sensitivity Tests, Models, Molecular, Structure-Activity Relationship, Cysteine Synthase antagonists & inhibitors, Enzyme Inhibitors pharmacology, Mycobacterium tuberculosis drug effects, Mycobacterium tuberculosis enzymology
- Abstract
Cysteine biosynthesis in Mycobacterium tuberculosis (MTB) is crucial for this pathogen to combat oxidative stress and for long term survival in the host. Hence inhibition of this pathway is attractive for developing novel drugs against tuberculosis. In the present study, the crystal structure of the mycobacterial enzyme O-acetylserine sulfhydrylase CysK1 bound to an oligopeptide inhibitor was used as a framework for virtual screening of the BITS-Pilani in-house database to identify new scaffolds as CysK1 inhibitors. Thirty compounds were synthesized and evaluated in vitro for their ability to inhibit CysK1, activity against M. tuberculosis and cytotoxicity as steps towards the derivation of structure-activity relationships (SAR) and lead optimization. Compound 8-nitro-4-(2-(trifluoromethyl)phenyl)-4,4a-dihydro-2H-pyrimido[5,4-e]thiazolo[3,2-a]pyrimidine-2,5(3H)-dione (4n) emerged as the most promising lead with an IC(50) of 17.7 μM for purified CysK1 and MIC of 7.6 μM for M. tuberculosis, with little or no cytotoxicity (>50 μM)., (Copyright © 2013 Elsevier Ltd. All rights reserved.)
- Published
- 2013
- Full Text
- View/download PDF
21. Design of a specific colonic mucus marker using a human commensal bacterium cell surface domain.
- Author
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Coïc YM, Baleux F, Poyraz Ö, Thibeaux R, Labruyere E, Chretien F, Sobhani I, Lazure T, Wyplosz B, Schneider G, Mulard L, Sansonetti PJ, and Marteyn BS
- Subjects
- Amino Acid Sequence, Animals, Bacterial Adhesion, Bacterial Proteins chemistry, Bacterial Proteins pharmacology, Cell Survival, Colon microbiology, Electrophoresis, Polyacrylamide Gel, Fluorescent Dyes chemistry, Glycosylation, Guinea Pigs, HT29 Cells, HeLa Cells, Host-Pathogen Interactions, Humans, Immunohistochemistry, Limosilactobacillus reuteri genetics, Limosilactobacillus reuteri physiology, Mice, Microscopy, Fluorescence, Molecular Sequence Data, Mucus microbiology, Protein Binding, Rabbits, Sequence Homology, Amino Acid, Species Specificity, Bacterial Proteins metabolism, Colon metabolism, Limosilactobacillus reuteri metabolism, Mucin-2 metabolism, Mucus metabolism
- Abstract
Imaging living cells and organs requires innovative, specific, efficient, and well tolerated fluorescent markers targeting cellular components. Such tools will allow proceeding to the dynamic analysis of cells and the adaptation of tissues to environmental cues. In this study, we have identified and synthesized a novel non-toxic fluorescent marker allowing a specific fluorescent staining of the human colonic mucus. Our strategy to identify a molecule able to specifically bind to the human colonic mucus was on the basis of the mucus adhesion properties of commensal bacteria. We identified and characterized the mucus-binding property of a 70-amino acid domain (MUB(70)) expressed on the surface of Lactobacillus strains. The chemical synthesis of MUB(70) was achieved using the human commensal bacterium Lactobacillus reuteri AF120104 protein as a template. The synthesized Cy5-conjugated MUB(70) marker specifically stained the colonic mucus on fixed human, rabbit, and guinea pig tissues. Interestingly, murine tissue was not stained, suggesting significant differences in the composition of the murine colonic mucus. In addition, this marker stained the mucus of living cultured human colonic cells (HT29-MTX) and human colonic tissue explants. Using a biotinylated derivative of MUB(70), we demonstrated that this peptide binds specifically to Muc2, the most abundant secreted mucin, through its glycosylated moieties. Hence, Cy5-MUB(70) is a novel and specific fluorescent marker for mammalian colonic mucus. It may be used for live imaging analysis but also, as demonstrated in this study, as a marker for the diagnosis and the prognosis of colonic mucinous carcinomas.
- Published
- 2012
- Full Text
- View/download PDF
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