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Internal solitary waves (ISWs) propagating in polar seas are affected by the sea ice at upper boundary of seas and thus exhibit complex evolution characteristics. Herein, spatiotemporal changes in the wave element, flow field, and energy of ISWs beneath an ice keel model were investigated to examine the evolution of ISWs. For this purpose, laboratory experiments were conducted using dye-tracing labeling, conductivity probes, Schlieren technology, and particle image velocimetry. The results show that ice keel causes an increase in the thickness of the pycnocline and even the occurrence of breaking and internal surging of ISW. Additionally, the waveform becomes narrower or wider at different positions, and wave amplitude and speed decrease, with a maximum reduction 30%–40%. Furthermore, the ice keel strengthens the shear of the ISW-induced flow field, generating vortices and mixing. The energy of ISWs undergoes internal conversion majorly at the front slope of the ice keel, while energy dissipation occurs largely at the back slope, with dissipation rates as high as 60%.

Two internal solitary waves (ISWs) with very long fronts observed by synthetic aperture radar (SAR) images in the northern South China Sea (NSCS) are comparatively analyzed based on oceanic reanalysis data and the Korteweg–de Vries (KdV) theory. The differences in the environmental parameters, wave half-width, and amplitude of the two ISW fronts in the two distinct oceanic environments are studied. In the presence of a weak westward surface current of approximately 0.05 m/s, the values of the linear wave speed increase by up to 0.056 m/s, and the retrieved ISW amplitudes decrease by up to 14 m. On the contrary, for another background oceanic environment considering a relatively strong eastward surface current of approximately 0.2 m/s, there are decreases of up to 0.17 m/s in the linear wave speed and increases of up to 32 m in the retrieved amplitudes. However, the results retrieved from both the SAR observations commonly show that the ISW amplitudes along the fronts reach their maximums at roughly 21°N and decrease toward the southern and northern sides, in spite of their distinct background environments.

An experimental investigation of the vertical structure characteristics of internal solitary waves (ISWs) was systematically carried out in a large gravitationally stratified fluid flume. Four different stratifications were established, and basic elements of ISWs were measured by a conductivity probe array. The vertical distributions of the amplitude, characteristic frequency and waveform of two types of ISWs under different stratifications were obtained, and the experimental results were compared with the theoretical model. The study shows that most vertical structures of the amplitude under different stratifications agree with those of the theoretical model, while there are some deviations for ISWs with large amplitudes. Neither the two-layer model nor the continuously stratified model can effectively describe the variation in the characteristic frequency at different depths with amplitude. For a single small-amplitude ISW, the characteristic frequency first increases and then decreases with increasing depth. The characteristic frequency is largest at the depth of the maximum buoyancy frequency. For an ISW with a relatively large amplitude, there is likely to be a local minimum of the characteristic frequency near the depth where the maximum buoyancy frequency lies. In different stratifications, the sech2 function of KdV theory can describe the waveforms of ISWs at different depths well.

Developments in deep learning techniques have led to significant advances in automated abnormality detection in radiological images and paved the way for their potential use in computer-aided diagnosis (CAD) systems. However, the development of CAD systems for pulmonary tuberculosis (TB) diagnosis is hampered by the lack of training data that is of good visual and diagnostic quality, of sufficient size, variety, and, where relevant, containing fine-region annotations. This study presents a collection of annotations/segmentations of pulmonary radiological manifestations that are consistent with TB in the publicly available and widely used Shenzhen chest X-ray (CXR) dataset made available by the U.S. National Library of Medicine and obtained via a research collaboration with No. 3. People’s Hospital Shenzhen, China. The goal of releasing these annotations is to advance the state of the art for image segmentation methods toward improving the performance of the fine-grained segmentation of TB-consistent findings in digital chest X-ray images. The annotation collection comprises the following: (1) annotation files in JavaScript Object Notation (JSON) format that indicate locations and shapes of 19 lung pattern abnormalities for 336 TB patients; (2) mask files saved in PNG format for each abnormality per TB patient; and (3) a comma-separated values (CSV) file that summarizes lung abnormality types and numbers per TB patient. To the best of our knowledge, this is the first collection of pixel-level annotations of TB-consistent findings in CXRs.

The annual species Dasypyrum villosum possesses several potentially valuable genes for the improvement of common wheat. Previously, we identified a new stripe rust-resistant line, the Chinese Spring (CS)–D. villosum 3V#3 (3D) substitution line (named CD-3), and mapped its potential rust resistance gene (designated as YrCD-3) on the 3V#3 chromosome originating from D. villosum. The objective of the present study was to further narrow down the YrCD-3 locus to a physical region and develop wheat-3V#3 introgression lines with strong stripe rust resistance. By treating CD-3 seeds with 60Co γ-irradiation, two CS-3V#3 translocation lines, T3V#3S.3DL and T3DS.3V#3L (termed 22-12 and 24-20, respectively), were identified from the M4 generation through a combination of non-denaturing fluorescence in situ hybridization (ND-FISH) and functional molecular markers. Stripe rust resistance tests showed that the line 22-12 exhibited strong stripe rust resistance similarly to CD-3, whereas 24-20 was susceptible to stripe rust similarly to CS, indicating that YrCD-3 is located on the short arm of 3V#3. The line 22-12 can potentially be used for further wheat improvement. Additionally, to trace 3V#3 in the wheat genetic background, we produced 30 3V#3-specific sequence tag (EST) markers, among which, 11 markers could identify 3V#3S. These markers could be valuable in fine-mapping YrCD-3.

Artificial allopolyploids derived from the genera Triticum and Aegilops have been used as genetic resources for wheat improvement and are a classic example of evolution via allopolyploidization. In this study, we investigated chromosomes and subgenome transmission behavior in the newly formed allopolyploid of wheat group via multicolor Fluorescence in situ hybridization (mc-FISH), using pSc119.2, pTa535, and (GAA)7 as probe combinations, to enabled us to precisely identify individual chromosomes in 381 S3 and S4 generations plants derived from reciprocal crosses between Ae. ventricosa (DvDvNvNv) and T. turgidum (AABB). A higher rate of aneuploidy, constituting 66.04–86.41% individuals, was observed in these two early generations. Of the four constituent subgenomes, Dv showed the highest frequency of elimination, followed by Nv and B, while A was the most stable. In addition, structural chromosomal changes occurred ubiquitously in the selfed progenies of allopolyploids. Among the constituent subgenomes, B showed the highest number of aberrations. In terms of chromosomal dynamics, there was no significant association between the chromosomal behavior model and the cytoplasm, with the exception of chromosomal loss in the Dv subgenome. The chromosome loss frequency in the Dv subgenome was significantly higher in the T. turgidum × Ae. ventricosa cross than in the Ae. ventricosa × T. turgidum cross. This result indicates that, although the D subgenome showed great instability, allopolyploids containing D subgenome could probably be maintained after a certain hybridization in which the D subgenome donor was used as the maternal parent at its onset stage. Our findings provide valuable information pertaining to the behavior patterns of subgenomes during allopolyploidization. Moreover, the allopolyploids developed here could be used as potential resources for the genetic improvement of wheat.

Mutations induced by radiation are widely used for developing new varieties of plants. To better understand the frequency and pattern of irradiation-induced chromosomal rearrangements, we irradiated the dry seeds of Chinese Spring (CS)-Dasypyrum villosum nullisomic-tetrasomic (6A/6D) addition (6V) line (2n = 44), WD14, with 60Co-γ-rays at dosages of 100, 200, and 300 Gy. The M0 and M1 generations were analyzed using Feulgen staining and non-denaturing fluorescence in situ hybridization (ND-FISH) by using oligonucleotide probes. Abnormal mitotic behavior and chromosomes with structural changes were observed in the M0 plants. In all, 39 M1 plants had structurally changed chromosomes, with the B genome showing the highest frequency of aberrations and tendency to recombine with chromosomes of the D genome. In addition, 19 M1 plants showed a variation in chromosome number. The frequency of chromosome loss was considerably higher for 6D than for the alien chromosome 6V, indicating that 6D is less stable after irradiation. Our findings suggested that the newly obtained γ-induced genetic materials might be beneficial for future wheat breeding programs and functional gene analyses.

Dasypyrum villosum has been used as a valuable gene resource for disease resistances, yield increase and quality improvement in wheat. A novel wheat-D. villosum alien introgression line CD-3 was generated through hybridization between the common wheat Chinese Spring (CS) and a CS- D. villosum 3V addition line having considerably high stripe rust resistance, which enable the characterization of a potential new stripe rust resistance gene (s) derived from D. villosum. The results of non-denaturing fluorescent in situ hybridization (ND-FISH) showed that CD-3 contained 42 chromosomes, including a 3V chromosome pair, and the absence of both of the 3D chromosomes. PCR-based Landmark Unique Gene (PLUG) molecular marker analysis supported results from the FISH analysis, revealing CD-3 was a wheat-D. villosum 3V (3D) disomic substitution line. Resistant test of stripe rust on 52 plants of F2 generation (CD-3/CS), CD-3, CS and D.villosum have been conducted at seedling stage. 7 plants of F2 generation possessing two 3V chromosomes exhibited high resistance to stripe rust as CD-3 and D.villosum, 10 plants carrying one 3V chromosome and 35 plants without 3V chromosome were susceptive to stripe rust as CS. The result implied the high stripe rust resistance of CD-3 should be controlled by recessive gene(s) originating from D.villosum. To rapidly detect chromosome 3V in the genetic background of wheat, we developed a novel Sequence Characterized Amplified Region (SCAR) marker specific for 3V chromosome based on the sequence of a grain size-related gene DvGS5 in D. villosum, an orthologue of TaGS5 from wheat. The SCAR marker was designated DvGS5-1443, which could successfully amplify a unique 3V-specific fragment in CD-3 and D. villosum, suggesting that this SCAR marker could facilitate targeting the chromosome 3V in the genetic background of wheat for wheat improvement.

10 accessions of tetraploid wheat were radiated with 100 Gy 60Co γ-ray. The germination energy, germination rate, special characters (secondary tillering, stalk with wax powder, and dwarf), meiotic process, and high-molecular-weight glutenin subunits (HMW-GSs) were observed. Different species has different radiation sensibility. With 1 seed germinated (5%), T. dicoccum (PI434999) is the most sensitive to this dose of radiation. With a seed germination rate of 35% and 40%, this dose also affected T. polonicum (As304) and T. carthlicum (As293). Two mutant dwarf plants, T. turgidum (As2255) 253-10 and T. polonicum (As302) 224-14, were detected. Abnormal chromosome pairings were observed in pollen mother cells of both T. dicoccoides (As835) 237-9 and T. dicoccoides (As838) 239-8 with HMW-GS 1Ax silent in seeds from them. Compared with the unirradiated seed of T. polonicum (As304) CK, a novel HMW-GS was detected in seed of T. polonicum (As304) 230-7 and its electrophoretic mobility was between 1By8 and 1Dy12 which were the HMW-GSs of Chinese Spring. These mutant materials would be resources for wheat breeding.