9 results on '"Qin-Lei FAN"'
Search Results
2. The Commensal Microbiota and Viral Infection: A Comprehensive Review
- Author
-
Na Li, Wen-Tao Ma, Ming Pang, Qin-Lei Fan, and Jin-Lian Hua
- Subjects
commensal microbiota ,germ-free ,antibiotics ,virus ,virus infectivity ,antiviral immunity ,Immunologic diseases. Allergy ,RC581-607 - Abstract
The human body is inhabited by a diverse microbial community that is collectively coined as commensal microbiota. Recent research has greatly advanced our understanding of how the commensal microbiota affects host health. Among the various kinds of pathogenic infections of the host, viral infections constitute one of the most serious public health problems worldwide. During the infection process, viruses may have substantial and intimate interactions with the commensal microbiota. A plethora of evidence suggests that the commensal microbiota regulates and is in turn regulated by invading viruses through diverse mechanisms, thereby having stimulatory or suppressive roles in viral infections. Furthermore, the integrity of the commensal microbiota can be disturbed by invading viruses, causing dysbiosis in the host and further influencing virus infectivity. In the present article, we discuss current insights into the regulation of viral infection by the commensal microbiota. We also draw attention to the disruption of microbiota homeostasis by several viruses.
- Published
- 2019
- Full Text
- View/download PDF
3. Methods for Enhancing Clustered Regularly Interspaced Short Palindromic Repeats/Cas9-Mediated Homology-Directed Repair Efficiency
- Author
-
Xi-Dian Tang, Fei Gao, Ming-Jie Liu, Qin-Lei Fan, De-Kun Chen, and Wen-Tao Ma
- Subjects
genome editing ,clustered regularly interspaced short palindromic repeats ,homologous-directed repair efficiency ,double-strand break ,nonhomologous end joining ,Genetics ,QH426-470 - Abstract
The evolution of organisms has provided a variety of mechanisms to maintain the integrity of its genome, but as damage occurs, DNA damage repair pathways are necessary to resolve errors. Among them, the DNA double-strand break repair pathway is highly conserved in eukaryotes, including mammals. Nonhomologous DNA end joining and homologous directed repair are two major DNA repair pathways that are synergistic or antagonistic. Clustered regularly interspaced short palindromic repeats genome editing techniques based on the nonhomologous DNA end joining repair pathway have been used to generate highly efficient insertions or deletions of variable-sized genes but are error-prone and inaccurate. By combining the homology-directed repair pathway with clustered regularly interspaced short palindromic repeats cleavage, more precise genome editing via insertion or deletion of the desired fragment can be performed. However, homologous directed repair is not efficient and needs further improvement. Here, we describe several ways to improve the efficiency of homologous directed repair by regulating the cell cycle, expressing key proteins involved in homologous recombination and selecting appropriate donor DNA.
- Published
- 2019
- Full Text
- View/download PDF
4. Development of a Monoclonal Antibody to Detect αs1-casein in the Milk of Healthy and Mastitis-Affected Goats
- Author
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Ming PANG, Xiong GUAN, Chen-Xiang ZUO, Ming-Jie LIU, Saad REHMAN, Qin-Lei FAN, Ping LU, De-Kun CHEN, and Wen-Tao MA
- Subjects
animal structures ,monoclonal antibody ,Veterinary medicine ,goat ,SF600-1100 ,elisa ,immunofluorescence ,mastitis ,αs1-casein - Abstract
This study aimed to evaluate the expression level of caseins during mastitis of goats. Whole goat caseins were used as primary antigens for mouse immunization. A monoclonal antibody (mAb) named 5B with high specificity to goat αs1-casein was developed. Further results showed that mAb 5B can successfully be applied to western blot and ELISA. In addition, immunofluorescence analysis using this mAb showed increased milk αs1-casein level in mastitis-affected goats. In conclusion, this study has established an effective tool to evaluate the expression level of αs1-casein during mastitis development.
- Published
- 2020
5. Pathogenicity of blood orf virus isolates in the development of dairy goat contagious pustular dermatitis
- Author
-
Xing-Ming Li, Ming-Jie Liu, Qin-Lei Fan, Xi-Dian Tang, Wei-Juan Li, Wen-Tao Ma, Dekun Chen, and Hong-Yu Cheng
- Subjects
0301 basic medicine ,China ,viruses ,030106 microbiology ,Virulence ,Disease ,Biology ,Polymerase Chain Reaction ,Microbiology ,Asymptomatic ,Disease Outbreaks ,law.invention ,Pathogenesis ,03 medical and health sciences ,law ,Ecthyma, Contagious ,medicine ,Animals ,Phylogeny ,Polymerase chain reaction ,Asymptomatic Diseases ,Goat Diseases ,General Veterinary ,Goats ,Outbreak ,Orf virus ,General Medicine ,Virology ,030104 developmental biology ,medicine.symptom - Abstract
Contagious pustular dermatitis is an exanthematous zoonotic disease caused by the orf virus. Pandemic outbreaks of this disease cause great economic losses, while the pathogenesis of this disease still remains obscure. In this study, blood samples were collected from 628 asymptomatic goats across China for PCR-based virus detection. We detected the orf virus in the blood of asymptomatic goats. Moreover, the orf virus obtained from the blood of infected goats was infectious and induced typical symptoms of contagious pustular dermatitis after inoculation of uninfected dairy goats. In summary, our data provide evidence that asymptomatic animals may be carriers of orf virus. Our findings should contribute to elucidating the details underlying the pathogenesis of contagious pustular dermatitis.
- Published
- 2018
6. The Commensal Microbiota and Viral Infection: A Comprehensive Review
- Author
-
Wen-Tao Ma, Jinlian Hua, Na Li, Qin-Lei Fan, and Ming Pang
- Subjects
lcsh:Immunologic diseases. Allergy ,virus infectivity ,viruses ,Immunology ,Review ,virus ,Biology ,digestive system ,Viral infection ,antibiotics ,Virus ,Microbiology ,Antiviral immunity ,medicine ,Homeostasis ,Humans ,Immunology and Allergy ,Host (biology) ,commensal microbiota ,medicine.disease ,Gastrointestinal Microbiome ,antiviral immunity ,stomatognathic diseases ,Virus Diseases ,germ-free ,Viruses ,lcsh:RC581-607 ,Dysbiosis - Abstract
The human body is inhabited by a diverse microbial community that is collectively coined as commensal microbiota. Recent research has greatly advanced our understanding of how the commensal microbiota affects host health. Among the various kinds of pathogenic infections of the host, viral infections constitute one of the most serious public health problems worldwide. During the infection process, viruses may have substantial and intimate interactions with the commensal microbiota. A plethora of evidence suggests that the commensal microbiota regulates and is in turn regulated by invading viruses through diverse mechanisms, thereby having stimulatory or suppressive roles in viral infections. Furthermore, the integrity of the commensal microbiota can be disturbed by invading viruses, causing dysbiosis in the host and further influencing virus infectivity. In the present article, we discuss current insights into the regulation of viral infection by the commensal microbiota. We also draw attention to the disruption of microbiota homeostasis by several viruses.
- Published
- 2019
7. Methods for Enhancing Clustered Regularly Interspaced Short Palindromic Repeats/Cas9-Mediated Homology-Directed Repair Efficiency
- Author
-
Wen-Tao Ma, Qin-Lei Fan, Xi-Dian Tang, Ming-Jie Liu, Dekun Chen, and Fei Gao
- Subjects
0301 basic medicine ,double-strand break ,homologous-directed repair efficiency ,lcsh:QH426-470 ,DNA repair ,Computational biology ,Review ,Biology ,Genome ,Homology directed repair ,03 medical and health sciences ,0302 clinical medicine ,Genome editing ,Genetics ,CRISPR ,genome editing ,Genetics (clinical) ,nonhomologous end joining ,DNA End-Joining Repair ,Non-homologous end joining ,lcsh:Genetics ,030104 developmental biology ,030220 oncology & carcinogenesis ,Molecular Medicine ,Homologous recombination ,clustered regularly interspaced short palindromic repeats - Abstract
The evolution of organisms has provided a variety of mechanisms to maintain the integrity of its genome, but as damage occurs, DNA damage repair pathways are necessary to resolve errors. Among them, the DNA double-strand break repair pathway is highly conserved in eukaryotes, including mammals. Nonhomologous DNA end joining and homologous directed repair are two major DNA repair pathways that are synergistic or antagonistic. Clustered regularly interspaced short palindromic repeats genome editing techniques based on the nonhomologous DNA end joining repair pathway have been used to generate highly efficient insertions or deletions of variable-sized genes but are error-prone and inaccurate. By combining the homology-directed repair pathway with clustered regularly interspaced short palindromic repeats cleavage, more precise genome editing via insertion or deletion of the desired fragment can be performed. However, homologous directed repair is not efficient and needs further improvement. Here, we describe several ways to improve the efficiency of homologous directed repair by regulating the cell cycle, expressing key proteins involved in homologous recombination and selecting appropriate donor DNA.
- Published
- 2019
8. Methodologies for Improving HDR Efficiency
- Author
-
Dekun Chen, Wen-Tao Ma, Kui Gu, Xi-Dian Tang, Qin-Lei Fan, Saad Rehman, and Ming-Jie Liu
- Subjects
0301 basic medicine ,lcsh:QH426-470 ,HDR ,Review ,Computational biology ,Biology ,Genome ,Homology (biology) ,DSB ,03 medical and health sciences ,0302 clinical medicine ,cell arrest ,Genetics ,CRISPR ,Gene ,HDR enhancement ,NHEJ ,Genetics (clinical) ,Nuclease ,Cas9 ,fungi ,Palindrome ,food and beverages ,Open reading frame ,enzymes and coenzymes (carbohydrates) ,lcsh:Genetics ,030104 developmental biology ,NHEJ inhibitors ,030220 oncology & carcinogenesis ,biology.protein ,Molecular Medicine ,CRISPR-Cas9 - Abstract
Clustered regularly interspaced short palindromic repeats (CRISPR)-associated protein 9 (Cas9) is a precise genome manipulating technology that can be programmed to induce double-strand break (DSB) in the genome wherever needed. After nuclease cleavage, DSBs can be repaired by non-homologous end joining (NHEJ) or homology-directed repair (HDR) pathway. For producing targeted gene knock-in or other specific mutations, DSBs should be repaired by the HDR pathway. While NHEJ can cause various length insertions/deletion mutations (indels), which can lead the targeted gene to lose its function by shifting the open reading frame (ORF). Furthermore, HDR has low efficiency compared with the NHEJ pathway. In order to modify the gene precisely, numerous methods arose by inhibiting NHEJ or enhancing HDR, such as chemical modulation, synchronized expression, and overlapping homology arm. Here we focus on the efficiency and other considerations of these methodologies.
- Published
- 2019
- Full Text
- View/download PDF
9. Sağlıklı ve Mastitisli Keçi Sütünde αs1-kazeini Belirleyen Monoklonal Antikor Geliştirilmesi
- Author
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Xiong Guan, Ping Lu, Qin-Lei Fan, Saad Rehman, Ming-Jie Liu, Chen-Xiang Zuo, Ming Pang, Wen-Tao Ma, and Dekun Chen
- Subjects
General Veterinary - Published
- 2019
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