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This study explores the application of diffusion models in the field of typhoons, predicting multiple ERA5 meteorological variables simultaneously from Digital Typhoon satellite images. The focus of this study is taken to be Taiwan, an area very vulnerable to typhoons. By comparing the performance of Conditional Denoising Diffusion Probability Model (CDDPM) with Convolutional Neural Networks (CNN) and Squeeze-and-Excitation Networks (SENet), results suggest that the CDDPM performs best in generating accurate and realistic meteorological data. Specifically, CDDPM achieved a PSNR of 32.807, which is approximately 7.9% higher than CNN and 5.5% higher than SENet. Furthermore, CDDPM recorded an RMSE of 0.032, showing a 11.1% improvement over CNN and 8.6% improvement over SENet. A key application of this research can be for imputation purposes in missing meteorological datasets and generate additional high-quality meteorological data using satellite images. It is hoped that the results of this analysis will enable more robust and detailed forecasting, reducing the impact of severe weather events on vulnerable regions. Code accessible at https://github.com/TammyLing/Typhoon-forecasting., Comment: 8 pages, 5 figures

Expert annotation of 3D medical image for downstream analysis is resource-intensive, posing challenges in clinical applications. Visual self-supervised learning (vSSL), though effective for learning visual invariance, neglects the incorporation of domain knowledge from medicine. To incorporate medical knowledge into visual representation learning, vision-language pre-training (VLP) has shown promising results in 2D image. However, existing VLP approaches become generally impractical when applied to high-resolution 3D medical images due to GPU hardware constraints and the potential loss of critical details caused by downsampling, which is the intuitive solution to hardware constraints. To address the above limitations, we introduce T3D, the first VLP framework designed for high-resolution 3D medical images. T3D incorporates two text-informed pretext tasks: (\lowerromannumeral{1}) text-informed contrastive learning; (\lowerromannumeral{2}) text-informed image restoration. These tasks focus on learning 3D visual representations from high-resolution 3D medical images and integrating clinical knowledge from radiology reports, without distorting information through forced alignment of downsampled volumes with detailed anatomical text. Trained on a newly curated large-scale dataset of 3D medical images and radiology reports, T3D significantly outperforms current vSSL methods in tasks like organ and tumor segmentation, as well as disease classification. This underlines T3D's potential in representation learning for 3D medical image analysis. All data and code will be available upon acceptance.

As tropical cyclones become more intense due to climate change, the rise of Al-based modelling provides a more affordable and accessible approach compared to traditional methods based on mathematical models. This work leverages generative diffusion models to forecast cyclone trajectories and precipitation patterns by integrating satellite imaging, remote sensing, and atmospheric data. It employs a cascaded approach that incorporates three main tasks: forecasting, super-resolution, and precipitation modelling. The training dataset includes 51 cyclones from six major tropical cyclone basins from January 2019 - March 2023. Experiments demonstrate that the final forecasts from the cascaded models show accurate predictions up to a 36-hour rollout, with excellent Structural Similarity (SSIM) and Peak-Singal-To-Noise Ratio (PSNR) values exceeding 0.5 and 20 dB, respectively, for all three tasks. The 36-hour forecasts can be produced in as little as 30 mins on a single Nvidia A30/RTX 2080 Ti. This work also highlights the promising efficiency of Al methods such as diffusion models for high-performance needs in weather forecasting, such as tropical cyclone forecasting, while remaining computationally affordable, making them ideal for highly vulnerable regions with critical forecasting needs and financial limitations. Code accessible at https://github.com/nathzi1505/forecast-diffmodels., Comment: Accepted for poster presentation at the ICLR 2024 workshop on Tackling Climate Change with Machine Learning. 7 pages, 3 figures

The scarcity of data presents a critical obstacle to the efficacy of medical visionlanguage pre-training (VLP). A potential solution lies in the combination of datasets from various language communities. Nevertheless, the main challenge stems from the complexity of integrating diverse syntax and semantics, language-specific medical terminology, and culture-specific implicit knowledge. Therefore, one crucial aspect to consider is the presence of community bias caused by different languages. This paper presents a novel framework named Unifying Cross-Lingual Medical Vision-Language Pre-Training (Med-UniC), designed to integrate multimodal medical data from the two most prevalent languages, English and Spanish. Specifically, we propose Cross-lingual Text Alignment Regularization (CTR) to explicitly unify cross-lingual semantic representations of medical reports originating from diverse language communities. CTR is optimized through latent language disentanglement, rendering our optimization objective to not depend on negative samples, thereby significantly mitigating the bias from determining positive-negative sample pairs within analogous medical reports. Furthermore, it ensures that the cross-lingual representation is not biased toward any specific language community. Med-UniC reaches superior performance across 5 medical image tasks and 10 datasets encompassing over 30 diseases, offering a versatile framework for unifying multi-modal medical data within diverse linguistic communities. The experimental outcomes highlight the presence of community bias in cross-lingual VLP. Reducing this bias enhances the performance not only in vision-language tasks but also in uni-modal visual tasks., Comment: NeurIPS 2023 Main track

Data Assimilation (DA) and Uncertainty quantification (UQ) are extensively used in analysing and reducing error propagation in high-dimensional spatial-temporal dynamics. Typical applications span from computational fluid dynamics (CFD) to geoscience and climate systems. Recently, much effort has been given in combining DA, UQ and machine learning (ML) techniques. These research efforts seek to address some critical challenges in high-dimensional dynamical systems, including but not limited to dynamical system identification, reduced order surrogate modelling, error covariance specification and model error correction. A large number of developed techniques and methodologies exhibit a broad applicability across numerous domains, resulting in the necessity for a comprehensive guide. This paper provides the first overview of the state-of-the-art researches in this interdisciplinary field, covering a wide range of applications. This review aims at ML scientists who attempt to apply DA and UQ techniques to improve the accuracy and the interpretability of their models, but also at DA and UQ experts who intend to integrate cutting-edge ML approaches to their systems. Therefore, this article has a special focus on how ML methods can overcome the existing limits of DA and UQ, and vice versa. Some exciting perspectives of this rapidly developing research field are also discussed.

Starting from the Kaya identity, we used a Neural ODE model to predict the evolution of several indicators related to carbon emissions, on a country-level: population, GDP per capita, energy intensity of GDP, carbon intensity of energy. We compared the model with a baseline statistical model - VAR - and obtained good performances. We conclude that this machine-learning approach can be used to produce a wide range of results and give relevant insight to policymakers, Comment: 5 pages, 2 figures, Tackling Climate Change with Machine Learning workshop at ICML 2021

This paper presents an approach to improve the forecast of computational fluid dynamics (CFD) simulations of urban air pollution using deep learning, and most specifically adversarial training. This adversarial approach aims to reduce the divergence of the forecasts from the underlying physical model. Our two-step method integrates a Principal Components Analysis (PCA) based adversarial autoencoder (PC-AAE) with adversarial Long short-term memory (LSTM) networks. Once the reduced-order model (ROM) of the CFD solution is obtained via PCA, an adversarial autoencoder is used on the principal components time series. Subsequentially, a Long Short-Term Memory network (LSTM) is adversarially trained on the latent space produced by the PC-AAE to make forecasts. Once trained, the adversarially trained LSTM outperforms a LSTM trained in a classical way. The study area is in South London, including three-dimensional velocity vectors in a busy traffic junction., Comment: 8 pages; 3 figures; Published as a workshop paper at ICLR 2021 SimDL Workshop. arXiv admin note: text overlap with arXiv:2101.01568

The outbreak of the coronavirus disease 2019 (COVID-19) has now spread throughout the globe infecting over 150 million people and causing the death of over 3.2 million people. Thus, there is an urgent need to study the dynamics of epidemiological models to gain a better understanding of how such diseases spread. While epidemiological models can be computationally expensive, recent advances in machine learning techniques have given rise to neural networks with the ability to learn and predict complex dynamics at reduced computational costs. Here we introduce two digital twins of a SEIRS model applied to an idealised town. The SEIRS model has been modified to take account of spatial variation and, where possible, the model parameters are based on official virus spreading data from the UK. We compare predictions from a data-corrected Bidirectional Long Short-Term Memory network and a predictive Generative Adversarial Network. The predictions given by these two frameworks are accurate when compared to the original SEIRS model data. Additionally, these frameworks are data-agnostic and could be applied to towns, idealised or real, in the UK or in other countries. Also, more compartments could be included in the SEIRS model, in order to study more realistic epidemiological behaviour., Comment: 44 pages, 17 figures, 3 tables

This paper presents an approach to improve computational fluid dynamics simulations forecasts of air pollution using deep learning. Our method, which integrates Principal Components Analysis (PCA) and adversarial training, is a way to improve the forecast skill of reduced order models obtained from the original model solution. Once the reduced-order model (ROM) is obtained via PCA, a Long Short-Term Memory network (LSTM) is adversarially trained on the ROM to make forecasts. Once trained, the adversarially trained LSTM outperforms a LSTM trained in a classical way. The study area is in London, including velocities and a concentration tracer that replicates a busy traffic junction. This adversarially trained LSTM-based approach is used on the ROM in order to produce faster forecasts of the air pollution tracer., Comment: 6 pages, Third workshop on Machine LEarning and the Physical Sciences at NeurIPS 2020