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1. Genome-wide sequence divergence of satellite DNA could underlie meiotic failure in male hybrids of bighead catfish and North African catfish (Clarias, Clariidae)

Author

Lisachov, Artem, Panthum, Thitipong, Dedukh, Dmitrij, Singchat, Worapong, Ahmad, Syed Farhan, Wattanadilokcahtkun, Pish, Thong, Thanyapat, Srikampa, Phanitada, Noito, Kantika, Rasoarahona, Ryan, Kraichak, Ekaphan, Muangmai, Narongrit, Chatchaiphan, Satid, Sriphairoj, Kednapat, Hatachote, Sittichai, Chaiyes, Aingorn, Jantasuriyarat, Chatchawan, Dokkaew, Sahabhop, Chailertlit, Visarut, Suksavate, Warong, Sonongbua, Jumaporn, Prasanpan, Jiraboon, Payungporn, Sunchai, Han, Kyudong, Antunes, Agostinho, Srisapoome, Prapansak, Koga, Akihiko, Duengkae, Prateep, Na-Nakorn, Uthairat, Matsuda, Yoichi, and Srikulnath, Kornsorn

Published
2024
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2. MicrosatNavigator: exploring nonrandom distribution and lineage-specificity of microsatellite repeat motifs on vertebrate sex chromosomes across 186 whole genomes

Author

Rasoarahona, Ryan, Wattanadilokchatkun, Pish, Panthum, Thitipong, Jaisamut, Kitipong, Lisachov, Artem, Thong, Thanyapat, Singchat, Worapong, Ahmad, Syed Farhan, Han, Kyudong, Kraichak, Ekaphan, Muangmai, Narongrit, Koga, Akihiko, Duengkae, Prateep, Antunes, Agostinho, and Srikulnath, Kornsorn

Published
2023
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3. Genome-Wide Sequence Divergence of Satellite DNA Could Underlie Meiotic Failure in Male Hybrids of Bighead Catfish and North African Catfish (Clarias, Clariidae)

Author

Lunev, Anton, primary, Panthum, Thitipong, additional, Dedukh, Dmitrij, additional, Singchat, Worapong, additional, Ahmad, Syed Farhan, additional, Wattanadilokchatkun, Pish, additional, Thong, Thanyapat, additional, Srikampa, Phanitada, additional, Noito, Kantika, additional, Rasoarahona, Ryan, additional, Kraichak, Ekaphan, additional, Muangmai, Narongrit, additional, Chatchaiphan, Satid, additional, Sriphairoj, Kednapat, additional, Hatachote, Sittichai, additional, Chaiyes, Aingorn, additional, Jantasuriyarat, Chatchawan, additional, Dokkaew, Sahabhop, additional, Chailertlit, Visarut, additional, Suksavate, Warong, additional, Sonongbua, Jumaporn, additional, Prasanpan, Jiraboon, additional, Payungporn, Sunchai, additional, Han, Kyudong, additional, Antunes, Agostinho, additional, Srisapoome, Prapansak, additional, Koga, Akihiko, additional, Duengkae, Prateep, additional, Na-Nakorn, Uthairat, additional, Matsuda, Yoichi, additional, and Srikulnath, Kornsorn, additional

Published
2024
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4. Questioning inbreeding: Could outbreeding affect productivity in the North African catfish in Thailand?

Author

Patta, Chananya, Panthum, Thitipong, Thatukan, Chadaphon, Wongloet, Wongsathit, Chalermwong, Piangjai, Wattanadilokchatkun, Pish, Thong, Thanyapat, Srikampa, Phanitada, Singchat, Worapong, Ahmad, Syed Farhan, Noito, Kantika, Rasoarahona, Ryan, Kraichak, Ekaphan, Muangmai, Narongrit, Chatchaiphan, Satid, Sriphairoj, Kednapat, Hatachote, Sittichai, Chaiyes, Aingorn, Jantasuriyarat, Chatchawan, and Chailertlit, Visarut

Subjects
INBREEDING, CLARIAS gariepinus, CATFISHES, LIVESTOCK breeding, GENETIC variation, MITOCHONDRIAL DNA, LIVESTOCK breeds
Abstract

The North African catfish (Clarias gariepinus) is a significant species in aquaculture, which is crucial for ensuring food and nutrition security. Their high adaptability to diverse environments has led to an increase in the number of farms that are available for their production. However, long-term closed breeding adversely affects their reproductive performance, leading to a decrease in production efficiency. This is possibly caused by inbreeding depression. To investigate the root cause of this issue, the genetic diversity of captive North African catfish populations was assessed in this study. Microsatellite genotyping and mitochondrial DNA D-loop sequencing were applied to 136 catfish specimens, collected from three populations captured for breeding in Thailand. Interestingly, extremely low inbreeding coefficients were obtained within each population, and distinct genetic diversity was observed among the three populations, indicating that their genetic origins are markedly different. This suggests that outbreeding depression by genetic admixture among currently captured populations of different origins may account for the low productivity of the North African catfish in Thailand. Genetic improvement of the North African catfish populations is required by introducing new populations whose origins are clearly known. This strategy should be systematically integrated into breeding programs to establish an ideal founder stock for selective breeding. [ABSTRACT FROM AUTHOR]

Published
2024
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5. Preserving Pure Siamese Crocodile Populations: A Comprehensive Approach Using Multi-Genetic Tools

Author

Panthum, Thitipong, primary, Ariyaraphong, Nattakan, additional, Wongloet, Wongsathit, additional, Wattanadilokchatkun, Pish, additional, Laopichienpong, Nararat, additional, Rasoarahona, Ryan, additional, Singchat, Worapong, additional, Ahmad, Syed Farhan, additional, Kraichak, Ekaphan, additional, Muangmai, Narongrit, additional, Duengkae, Prateep, additional, Fukuda, Yusuke, additional, Banks, Sam, additional, Temsiripong, Yosapong, additional, Ezaz, Tariq, additional, and Srikulnath, Kornsorn, additional

Published
2023
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6. Overcoming taxonomic challenges in DNA barcoding for improvement of identification and preservation of clariid catfish species

Author

Chalermwong, Piangjai, primary, Panthum, Thitipong, additional, Wattanadilokcahtkun, Pish, additional, Ariyaraphong, Nattakan, additional, Thong, Thanyapat, additional, Srikampa, Phanitada, additional, Singchat, Worapong, additional, Ahmad, Syed Farhan, additional, Noito, Kantika, additional, Rasoarahona, Ryan, additional, Lisachov, Artem, additional, Ali, Hina, additional, Kraichak, Ekaphan, additional, Muangmai, Narongrit, additional, Chatchaiphan, Satid, additional, Sriphairoj, Kednapat, additional, Hatachote, Sittichai, additional, Chaiyes, Aingorn, additional, Jantasuriyarat, Chatchawan, additional, Chailertlit, Visarut, additional, Suksavate, Warong, additional, Sonongbua, Jumaporn, additional, Srimai, Witsanu, additional, Payungporn, Sunchai, additional, Han, Kyudong, additional, Antunes, Agostinho, additional, Srisapoome, Prapansak, additional, Koga, Akihiko, additional, Duengkae, Prateep, additional, Matsuda, Yoichi, additional, Na-Nakorn, Uthairat, additional, and Srikulnath, Kornsorn, additional

Published
2023
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7. Optimizing Microsatellite Marker Panels for Genetic Diversity and Population Genetic Studies: An Ant Colony Algorithm Approach with Polymorphic Information Content

Author

Rasoarahona, Ryan, primary, Wattanadilokchatkun, Pish, additional, Panthum, Thitipong, additional, Thong, Thanyapat, additional, Singchat, Worapong, additional, Ahmad, Syed Farhan, additional, Chaiyes, Aingorn, additional, Han, Kyudong, additional, Kraichak, Ekaphan, additional, Muangmai, Narongrit, additional, Koga, Akihiko, additional, Duengkae, Prateep, additional, Antunes, Agostinho, additional, and Srikulnath, Kornsorn, additional

Published
2023
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