1. Design of ( R )-3-(5-Thienyl)carboxamido-2-aminopropanoic Acid Derivatives as Novel NMDA Receptor Glycine Site Agonists: Variation in Molecular Geometry to Improve Potency and Augment GluN2 Subunit-Specific Activity.
- Author
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Zhao F, Atxabal U, Mariottini S, Yi F, Lotti JS, Layeux MS, Currier C, Maderia MP, Cornelison LE, Anderson CM, Schultz EP, Zhang Z, Jiang L, Gao Z, Liu N, Woodahl EL, Bunch L, Hansen KB, and Clausen RP
- Subjects
- Humans, Animals, Structure-Activity Relationship, Blood-Brain Barrier metabolism, HEK293 Cells, Models, Molecular, Protein Subunits metabolism, Protein Subunits agonists, Rats, Receptors, N-Methyl-D-Aspartate agonists, Receptors, N-Methyl-D-Aspartate metabolism, Glycine chemistry, Glycine pharmacology, Glycine analogs & derivatives, Drug Design
- Abstract
NMDA receptor ligands have therapeutic potential in neurological and psychiatric disorders. We designed ( R )-3-(5-thienyl)carboxamido-2-aminopropanoic acid derivatives with nanomolar agonist potencies at NMDA receptor subtypes (GluN12/A-D). These compounds are superagonists at GluN1/2C compared to glycine and partial to full agonists at GluN1/2A and GluN1/2D but display functional antagonism at GluN1/2B due to low agonist efficacy. Notably, 8d display 864% agonist efficacy at GluN1/2C relative to glycine, and 8j has high potency at GluN1/2A (0.018 μM), GluN1/2C (0.0029 μM), and GluN1/2D (0.016 μM). We evaluated the binding mode in the glycine site using molecular modeling and mutagenesis. In vitro absorption, distribution, metabolism, and excretion (ADME) assays predict high metabolic stability but poor blood-brain barrier permeability. However, an ester prodrug for the carboxylate group of 7j display moderately high blood-brain barrier permeability. The thiophenecarboxamide agonists expand the synthetic pharmacology of NMDA receptors and provide structural insights that facilitate the design of GluN1 agonists with GluN2 subunit-specific activity.
- Published
- 2025
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