138 results on '"Rocha JF"'
Search Results
2. PO043 Efficacy of eslicarbazepine acetate versus controlled-release carbamazepine as monotherapy in patients with newly diagnosed partial-onset seizures
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Ben-Menachem, E, Trinka, E, Kowacs, P, Elger, C, Moreira, J, Pinto, R, Ikedo, F, Pereira, A, Rocha, JF, and Soares-da-Silva, P
- Published
- 2017
- Full Text
- View/download PDF
3. PO046 Safety and tolerability of eslicarbazepine acetate as monotherapy in patients with newly diagnosed partial-onset seizures
- Author
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Trinka, E, Kowacs, P, Ben-Menachem, E, Elger, C, Moreira, J, Pinto, R, Ikedo, F, Pereira, A, Rocha, JF, and Soares-da-Silva, P
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- 2017
- Full Text
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4. Pooled efficacy and safety of eslicarbazepine acetate as add-on treatment in patients with focal-onset seizures: Data from four double-blind placebo-controlled pivotal phase III clinical studies
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Elger, C, Koepp, M, Trinka, E, Villanueva, V, Chaves, J, Ben-Menachen, E, Kowacs, PA, Gil-Nagel, A, Moreira, J, Gama, H, Rocha, JF, and Soares-da-Silva, P
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eslicarbazepine acetate ,adjunctive therapy ,adults ,antiepileptic drugs ,focal-onset seizures ,refractory epilepsy - Abstract
Purpose: Pooled evaluation of the key efficacy and safety profile of eslicarbazepine acetate (ESL) added-on to stable antiepileptic therapy in adults with focal-onset seizures. Methods: Data from 1703 patients enrolled in four phase III double-blind, randomized, placebo-controlled studies were pooled and analyzed. Following a 2 week titration period, ESL was administered at 400 mg, 800 mg, and 1200 mg once-daily doses for 12 weeks (maintenance period). Pooled efficacy variable was standardized (/ 4 weeks) seizure frequency (SSF) analyzed over the maintenance period as reduction in absolute and relative SSF and proportion of responders (>= 50% reduction in SSF). Pooled safety was analyzed by means of adverse events and clinical laboratory assessments. Results: SSF was significantly reduced with ESL 800 mg (P < 0.0001) and 1200 mg (P < 0.0001) compared to placebo. Median relative reduction in SSF was 33.4% for ESL 800 mg and 37.8% for 1200 mg (placebo: 17.6%), and responder rate was 33.8% and 43.1% (placebo: 22.2%). ESL was more efficacious than placebo regardless of gender, geographical region, epilepsy duration, age at time of diagnosis, seizure type, and type of concomitant antiepileptic drugs (AED). Incidence of adverse events (AEs) and AEs leading to discontinuation was dose dependent. Most common AEs (>10% patients) were dizziness, somnolence, and nausea. The incidence of treatment-emergent AEs (dizziness, somnolence, ataxia, vomiting, and nausea) was lower in patients who began taking ESL 400 mg (followed by 400 mg increments to 800 or 1200 mg) than in those who began taking ESL 600 mg or 800 mg. Conclusions: Once-daily ESL 800 mg and 1200 mg showed consistent results across all efficacy and safety endpoints, independent of study population characteristics and type of concomitant AEDs. Treatment initiated with ESL 400 mg followed by 400 mg increments to 800 or 1200 mg provides optimal balance of efficacy and tolerability.
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- 2017
5. Genetic variability in Blanco Orejinegro breed cattle populations in Colombia
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Llinás Ap, Martínez R, and M-Rocha Jf
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Veterinary medicine ,Genotype ,Biology ,Breeding ,Colombia ,Loss of heterozygosity ,Evolution, Molecular ,Effective population size ,Genetics ,Animals ,Cluster Analysis ,Genetic variability ,Molecular Biology ,Alleles ,Phylogeny ,Genetic diversity ,Polymorphism, Genetic ,Genetic Variation ,General Medicine ,Zebu ,Breed ,Genetics, Population ,Microsatellite ,Cattle ,Inbreeding ,Microsatellite Repeats - Abstract
We analyzed population structure and genetic diversity in Blanco Orejinegro Creole cattle with 12 microsatellite markers, genotyping 138 individuals belonging to 7 commercial and 3 conservation herds. These markers showed a high level of polymorphism; 171 alleles were identified. The mean number of alleles per locus was 5.63 (3.82-6.58). The total number of alleles per marker was 14.2 and ranged from 16 (TGLA126) to 22 (TGLA227). The mean expected heterozygosity (0.73) was higher than the observed heterozygosity (0.65), with a significant excess of heterozygosity in almost all populations (FIS = 0.09; P < 0.05). This may be due to crossing between different lines of this breed, affecting the inbreeding levels. Analysis of relationships among populations, assessed by principal component analysis and Nei's genetic distances, indicated a close relationship between some herds. Furthermore, analysis of population structure demonstrated a low probability of admixture with Zebu breeds, as it shows the cluster assignment and the FST values obtained. We conclude that there is high allelic diversity in this breed, even though a low effective population size has been maintained and the level of inbreeding has not been monitored. Therefore, appropriate conservation efforts should be undertaken, such as adopting strategies aimed at minimizing inbreeding, to avoid losing genetic variability.
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- 2013
6. Brain Diffusion-Weighted and Diffusion Tensor Imaging Findings in an Infant with Biotinidase Deficiency
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Soares-Fernandes, JP, Magalhães, Z, Rocha, JF, and Barkovich, AJ
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Recém-Nascido ,Doenças do Cérebro ,Letters ,Deficiência de Biotinidase ,Ressonância Magnética por Difusão - Abstract
Submitted by Helena Donato (bibliotecaria@hospitaldebraga.com.pt) on 2013-03-03T12:21:56Z No. of bitstreams: 1 Brain diffusion-weighted and diffusion tensor imaging findings in an infant with biotinidase deficiency..pdf: 163813 bytes, checksum: fb87df2dca0e75e1848a39e04bf78646 (MD5) Approved for entry into archive by Helena Donato (bibliotecaria@hospitaldebraga.com.pt) on 2013-03-03T12:22:13Z (GMT) No. of bitstreams: 1 Brain diffusion-weighted and diffusion tensor imaging findings in an infant with biotinidase deficiency..pdf: 163813 bytes, checksum: fb87df2dca0e75e1848a39e04bf78646 (MD5) Made available in DSpace on 2013-03-03T12:22:13Z (GMT). No. of bitstreams: 1 Brain diffusion-weighted and diffusion tensor imaging findings in an infant with biotinidase deficiency..pdf: 163813 bytes, checksum: fb87df2dca0e75e1848a39e04bf78646 (MD5) Previous issue date: 2009 Restored into DSpace on 2014-05-09T11:56:14Z (GMT).
- Published
- 2009
7. The sonographic pitfall of carotid collateralisation via the vasa vasorum
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Soares-Fernandes, JP, Ribeiro, M, Magalhães, Z, and Rocha, JF
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Vasa Vasorum ,Estenose Carotídea ,cardiovascular system ,Ultrassonografia Doppler a Cores - Abstract
Submitted by Helena Donato (bibliotecaria@hospitaldebraga.com.pt) on 2012-02-17T13:35:06Z No. of bitstreams: 1 BMJ Case Rep.pdf: 145603 bytes, checksum: cfce364ebd1f751bf8a1bc72a29844b4 (MD5) Approved for entry into archive by Helena Donato(bibliotecaria@hospitaldebraga.com.pt) on 2012-02-17T13:35:44Z (GMT) No. of bitstreams: 1 BMJ Case Rep.pdf: 145603 bytes, checksum: cfce364ebd1f751bf8a1bc72a29844b4 (MD5) Made available in DSpace on 2012-02-17T13:35:44Z (GMT). No. of bitstreams: 1 BMJ Case Rep.pdf: 145603 bytes, checksum: cfce364ebd1f751bf8a1bc72a29844b4 (MD5) Previous issue date: 2009 Restored into DSpace on 2014-05-09T11:31:30Z (GMT).
- Published
- 2009
8. Neurological picture. The sonographic pitfall of carotid collateralisation via the vasa vasorum
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Soares-Fernandes, JP, Ribeiro, M, Magalhães, Z, and Rocha, JF
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Vasa Vasorum ,Ultrassonografia Doppler a Cores ,Estenose CarotídeaEstenose Carotídea - Abstract
Submitted by Helena Donato (bibliotecaria@hospitaldebraga.com.pt) on 2012-02-19T00:17:26Z No. of bitstreams: 1 Neurological picture.pdf: 496899 bytes, checksum: 8de7eba1841c2c7a098aa448bacea48f (MD5) Approved for entry into archive by Helena Donato(bibliotecaria@hospitaldebraga.com.pt) on 2012-02-19T00:18:07Z (GMT) No. of bitstreams: 1 Neurological picture.pdf: 496899 bytes, checksum: 8de7eba1841c2c7a098aa448bacea48f (MD5) Made available in DSpace on 2012-02-19T00:18:07Z (GMT). No. of bitstreams: 1 Neurological picture.pdf: 496899 bytes, checksum: 8de7eba1841c2c7a098aa448bacea48f (MD5) Previous issue date: 2007 Restored into DSpace on 2014-05-09T11:32:44Z (GMT).
- Published
- 2007
9. Pharmacokinetics, pharmacodynamics and tolerability of opicapone, a novel catechol-O-methyltransferase inhibitor, in healthy subjects: prediction of slow enzyme-inhibitor complex dissociation of a short-living and very long-acting inhibitor.
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Almeida L, Rocha JF, Falcao A, Nuno Palma P, Loureiro AI, Pinto R, Bonifácio MJ, Wright LC, Nunes T, Soares-da-Silva P, Almeida, Luis, Rocha, José Francisco, Falcão, Amílcar, Palma, P Nuno, Loureiro, Ana I, Pinto, Roberto, Bonifácio, Maria João, Wright, Lyndon C, Nunes, Teresa, and Soares-da-Silva, Patrício
- Abstract
Background and Objectives: Opicapone is a novel catechol-O-methyltransferase (COMT) inhibitor. The purpose of this study was to evaluate the tolerability, pharmacokinetics (including the effect of food) and pharmacodynamics (effect on COMT activity) following single oral doses of opicapone in young healthy male volunteers.Methods: Single rising oral doses of opicapone (10, 25, 50, 100, 200, 400, 800 and 1,200 mg) were administered to eight groups of eight subjects per group (two subjects randomized to placebo and six subjects to opicapone), under a double-blind, randomized, placebo-controlled design. In an additional group of 12 subjects, a 50 mg single dose of opicapone was administered on two occasions, once having fasted overnight and once with a high-fat high-calorie meal.Results: Opicapone was well tolerated at all doses tested. The extent of systemic exposure (area under the plasma concentration-time curve and maximum plasma concentration) to opicapone and metabolites increased in an approximately dose-proportional manner and showed a decrease following concomitant ingestion of a high-fat high-calorie meal. The apparent terminal elimination half-life of opicapone was 0.8-3.2 h. Sulphation appeared to be the main metabolic pathway for opicapone, and both opicapone and the main sulphated metabolite are likely excreted by the biliary route. Maximum COMT inhibition by opicapone was dose dependent, ranged from 36.1% (10 mg) to 100% (200 mg and above), and reached statistical significance at all doses tested. The long duration of COMT inhibition by opicapone, however, tended to be independent from the dose taken. The observed half-life of opicapone-induced COMT inhibition in human erythrocytes was 61.6 h (standard deviation [SD] = 37.6 h), which reflects an underlying dissociative process with a kinetic rate constant of 3.1 × 10(-6) s(-1) (SD = 1.9 × 10(-6) s(-1)). Such a process compares well to the estimated dissociation rate constant (k(off)) of the COMT-opicapone molecular complex (k(off) = 1.9 × 10(-6) s(-1)).Conclusions: Opicapone was well-tolerated and presented dose-proportional kinetics. Opicapone demonstrated marked and sustained inhibition of erythrocyte soluble COMT activity. Based on the observation that the half-life of COMT inhibition is independent of the dose and that it reflects an underlying kinetic process that is consistent with the k(off) value of the COMT-opicapone complex, we propose that the sustained COMT inhibition, far beyond the observable point of clearance of circulating drug, is due to the long residence time of the reversible complex formed between COMT and opicapone. Globally, these promising results provide a basis for further clinical development of opicapone. [ABSTRACT FROM AUTHOR]- Published
- 2013
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10. Evaluation of opicapone's cardiac safety in patients with Parkinson's disease: analysis of the centralized phase III ECG dataset
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Vaz Da Silva, M., Roberto Pinto, Lopes, N., Ferreira, J., Lees, A., Gama, H., Santos, A., Oliveira, C., Nunes, T., Rocha, Jf, and Soares Da Silva, P.
11. Safety of opicapone in patients with Parkinson's disease and motor fluctuations: 1-year follow-up
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Lees, A., Ferreira, J., Costa, R., Oliveira, C., Roberto Pinto, Lopes, N., Nunes, T., Rocha, Jf, and Soares Da Silva, P.
12. Evaluating the efficacy and safety of opicapone in patients over 70 years with Parkinson's disease and motor fluctuations
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Lees, A., Ferreira, J., Lopes, N., Costa, R., Santos, A., Oliveira, C., Roberto Pinto, Nunes, T., Rocha, Jf, and Soares Da Silva, P.
13. Efficacy of opicapone in combination with dopamine agonists or MAO-B inhibitors on the treatment of motor fluctuations in Parkinson's disease
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Lopes, N., Ferreira, J., Lees, A., Costa, R., Santos, A., Oliveira, C., Roberto Pinto, Nunes, T., Rocha, Jf, and Soares Da Silva, P.
14. QT/QTc evaluation of opicapone in healthy adults
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Vaz Da Silva, M., Roberto Pinto, Lopes, N., Santos, A., Nunes, T., Rocha, Jf, and Soares Da Silva, P.
15. Pharmacokinetics, pharmacodynamics and tolerability of opicapone, a novel COMT inhibitor, during the first administration to healthy male subjects
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Nunes, T., Rocha, Jf, Roberto Pinto, Machado, R., Wright, L., Falcao, A., Almeida, L., and Soares Da Silva, P.
16. Opicapone effect on levodopa pharmacokinetics in comparison with placebo and entacapone when administered with immediate release 100/25 mg levodopa/carbidopa in healthy subjects
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Rocha, Jf, Falcao, A., Lopes, N., Roberto Pinto, Santos, A., Nunes, T., and Soares Da Silva, P.
17. Evaluation of non-motor symptoms in opicapone treated Parkinson's disease patients: results from a double-blind, randomized, placebo-controlled study and open-label extension
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Oliveira, C., Lees, A., Ferreira, J., Lopes, N., Costa, R., Roberto Pinto, Nunes, T., Rocha, Jf, and Soares Da Silva, P.
18. Evaluation of global impressions of change in opicapone-treated patients with Parkinson's disease and motor fluctuations compared to placebo and entacapone
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Santos, A., Ferreira, J., Lees, A., Roberto Pinto, Lopes, N., Rocha, Jf, Nunes, T., and Soares Da Silva, P.
19. Pooled efficacy analysis of opicapone as adjunctive therapy to levodopa in patients with Parkinson's disease and motor fluctuations
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Ferreira, J., Lees, A., Santos, A., Lopes, N., Costa, R., Oliveira, C., Roberto Pinto, Nunes, T., Rocha, Jf, and Soares Da Silva, P.
20. Opicapone long-term efficacy and safety in Parkinson's disease BIPARK-II study: a one-year open-label follow-up
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Costa, R., Oliveira, C., Roberto Pinto, Lopes, N., Nunes, T., Rocha, Jf, and Soares Da Silva, P.
21. Optical communications research at Institute of Telecommunications (vol 24, pg 411, 2005)
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Rocha, Jf, Cartaxo, At, Silva, Hj, Pinto, Jl, Teixeira, Al, Gameiro, As, Monteiro, Pp, Pires, Jo, Ribeiro, Rs, Violas, Mo, Pinto, An, Lima, Mn, Andre, Ps, Freire, Mm, Ribeiro, Al, Fernandes, Cf, Pereira, Jt, Pousa, Jm, Santos, Jm, Almeida, Mt, Tavares, Ar, Nogueira, Rn, and Machado, Js
22. Evaluation of efficacy of opicapone in Parkinson's disease patients with motor fluctuations: phase III, randomized, double-blind, placebo and active-controlled study (BIPARK I)
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Ferreira, J., Lees, A., Santos, A., Roberto Pinto, Lopes, N., Nunes, T., Rocha, Jf, and Soares Da Silva, P.
23. Evaluation of the safety and tolerability of opicapone in the treatment of Parkinson's disease and motor fluctuations: analysis of pooled phase III studies
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Gama, H., Ferreira, J., Lees, A., Lopes, N., Santos, A., Costa, R., Oliveira, C., Roberto Pinto, Nunes, T., Rocha, Jf, and Soares Da Silva, P.
24. EDFA gain flattening using long-period fibre gratings based on the electric arc technique
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Frazao, O., Rego, G., Lima, M., Teixeira, A., Araujo, Fm, Andre, P., Da Rocha, Jf, Salgado, Hm, and UCL
25. Neurological picture. The sonographic pitfall of carotid collateralisation via the vasa vasorum.
- Author
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Soares-Fernandes JP, Ribeiro M, Magalhaes Z, Rocha JF, Soares-Fernandes, João P, Ribeiro, Manuel, Magalhães, Zita, and Rocha, Jaime F
- Published
- 2007
- Full Text
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26. Pharmacokinetic-pharmacodynamic interaction between nebicapone and controlled-release levodopa/benserazide: a single-center, Phase I, double-blind, randomized, placebo-controlled, four-way crossover study in healthy subjects.
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Nunes T, Machado R, Rocha JF, Fernandes-Lopes C, Costa R, Torrão L, Loureiro AI, Falcão A, Vaz-da-Silva M, Wright L, Almeida L, and Soares-da-Silva P
- Abstract
BACKGROUND: Nebicapone is a reversible catechol-O-methyltransferase (COMT) inhibitor. Coadministration of a COMT inhibitor with levodopa and a dopa-decarboxylase inhibitor (carbidopa or benserazide) increases levodopa exposure and its therapeutic effect. OBJECTIVES: The primary objective of this study was to investigate the effect of nebicapone (50, 100, and 200 mg), compared with placebo, on levodopa pharmacokinetics when coadministered with a single dose of controlled-release levodopa 100 mg/benserazide 25 mg. The secondary objectives were to investigate the effect of nebicapone on the erythrocyte-soluble COMT (S-COMT) activity and on the plasma levels of the levodopa 3-O-methylated metabolite (3-O-methyldopa [3-OMD]). Nebicapone's tolerability was also assessed. METHODS: This was a single-center, Phase I, doubleblind, randomized, placebo-controlled, 4-way crossover study conducted in healthy adult volunteers. Each of the 4 single-dose treatment periods was separated by a washout period of > or = 5 days. During the different treatment periods, subjects received a single dose of controlled-release levodopa 100 mg/benserazide 25 mg concomitantly with nebicapone 50, 100, and 200 mg or placebo. Plasma concentrations of nebicapone, levodopa, and 3-OMD were determined by HPLC. Blood samples (7 mL) for determination of plasma concentrations of levodopa, 3-OMD, and 2258 nebicapone, as well as for the assay of S-COMT activity, were collected in potassium EDTA test tubes at the following times: predose and 0.5, 1, 1.5, 2, 3, 4, 6, 8, 12, 16, and 24 hours postdose. S-COMT activity was assessed as the amount of metanephrine formed by the action of S-COMT on an epinephrine substrate. Spontaneously reported clinical adverse events (AEs) were recorded throughout the study. RESULTS: Sixteen subjects (8 females, 8 males; mean [SD] age, 26.13 [6.29] years; weight, 69.4 [12.4] kg; body mass index, 24.0 [3.0] kg/m2) completed the 4 treatment periods and had data available for pharmacokinetic and pharmacodynamic analyses. Compared with placebo, levodopa C(max) increased 25%, 30%, and 34%, and AUC increased 14%, 37%, and 42% after administration of nebicapone 50, 100, and 200 mg, respectively. After administration of nebicapone 50, 100, and 200 mg, 3-OMD C(max) decreased 44%, 57%, and 58%, and 3-OMD AUC(0-infinity) decreased 33%, 37%, and 45%, respectively, compared with placebo. Extent of exposure to levodopa, as assessed by using AUC(0-t), increased with all doses of nebicapone in relationship to placebo, but the difference did not reach statistical significance. This may be related to a relatively high inter-subject variability: %CVs ranged from 48.0% with nebicapone 100 mg to 66.8% with placebo. Maximum S-COMT inhibition by nebicapone occurred at approximately 1.5 hours postdose and ranged from 57% with nebicapone 50 mg to 74% with nebicapone 200 mg. There was an inverse correlation between plasma concentrations of nebicapone and S-COMT activity; T(max) of nebicapone plasma concentrations and time to occurrence of the maximum inhibition of S-COMT activity appeared to correlate. Nineteen AEs were reported; 8 were assessed by the investigator as possibly related to treatment. All AEs were mild in severity. There were no serious AEs or discontinuations due to AEs. No abnormalities in liver enzyme levels were found. CONCLUSIONS: When administered concomitantly with a single dose of controlled-release levodopa 100 mg/benserazide 25 mg, single doses of nebicapone 50, 100, and 200 mg were well tolerated in these healthy adult volunteers, and dose dependently inhibited S-COMT activity and reduced 3-OMD formation compared with placebo. However, there was no significant difference in levodopa bioavailability. [ABSTRACT FROM AUTHOR]
- Published
- 2009
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27. Opicapone as adjunct to levodopa in treated Parkinson's disease without motor complications: A randomized clinical trial.
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Ferreira JJ, Rascol O, Stocchi F, Antonini A, Moreira J, Castilla-Fernández G, Rocha JF, Holenz J, and Poewe W
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- Humans, Male, Female, Middle Aged, Double-Blind Method, Aged, Oxadiazoles adverse effects, Oxadiazoles administration & dosage, Oxadiazoles therapeutic use, Catechol O-Methyltransferase Inhibitors administration & dosage, Catechol O-Methyltransferase Inhibitors therapeutic use, Treatment Outcome, Severity of Illness Index, Parkinson Disease drug therapy, Levodopa administration & dosage, Levodopa adverse effects, Antiparkinson Agents administration & dosage, Antiparkinson Agents therapeutic use, Antiparkinson Agents adverse effects, Drug Therapy, Combination
- Abstract
Background: Catechol-O-methyl transferase (COMT) inhibitors are routinely used to manage motor fluctuations in Parkinson's disease (PD). We assessed the effect of opicapone on motor symptom severity in levodopa-treated patients without motor complications., Methods: This was a randomized, double-blind, 24-week, placebo-controlled study of opicapone 50 mg as adjunct to levodopa (NCT04978597). Levodopa-treated patients without motor complications were randomized to 24 weeks of double-blind treatment with adjunct opicapone 50 mg or matching placebo. The primary efficacy endpoint was the mean change from baseline to week 24 in Movement Disorder Society-Unified Parkinson's Disease Rating Scale Part III (MDS-UPDRS-III) total score., Results: A total of 355 patients were randomized (opicapone 50 mg n = 177, placebo n = 178) and 322 (91%) completed the double-blind period. The adjusted mean [95% CI] change from baseline to week 24 in MDS-UPDRS-III subscore was -6.5 [-7.9, -5.2] in the opicapone group versus -4.3 [-5.7, 3.0] in the placebo group resulting in a significant difference of -2.2 [-3.9, -0.5] favoring opicapone (p = 0.010). There was no difference in the incidence of patients who developed motor complications (5.5% with opicapone vs. 9.8% with placebo) and the incidence of adverse events considered related to study medication was similar between groups (opicapone 10.2% vs. placebo 13.5%)., Conclusions: Treatment with once-daily adjunct opicapone was well tolerated, improved motor severity, and did not induce the development of motor complications. These results support the clinical usefulness of opicapone in the management of PD patients without motor complications., (© 2024 The Author(s). European Journal of Neurology published by John Wiley & Sons Ltd on behalf of European Academy of Neurology.)
- Published
- 2025
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28. Re-emergence of Oropouche virus between 2023 and 2024 in Brazil: an observational epidemiological study.
- Author
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Scachetti GC, Forato J, Claro IM, Hua X, Salgado BB, Vieira A, Simeoni CL, Barbosa ARC, Rosa IL, de Souza GF, Fernandes LCN, de Sena ACH, Oliveira SC, Singh CML, de Lima STS, de Jesus R, Costa MA, Kato RB, Rocha JF, Santos LC, Rodrigues JT, Cunha MP, Sabino EC, Faria NR, Weaver SC, Romano CM, Lalwani P, Proenca-Modena JL, and de Souza WM
- Abstract
Background: Oropouche virus is an arthropod-borne virus that has caused outbreaks of Oropouche fever in central and South America since the 1950s. This study investigates virological factors contributing to the re-emergence of Oropouche fever in Brazil between 2023 and 2024., Methods: In this observational epidemiological study, we combined multiple data sources for Oropouche virus infections in Brazil and conducted in-vitro and in-vivo characterisation. We collected serum samples obtained in Manaus City, Amazonas state, Brazil, from patients with acute febrile illnesses aged 18 years or older who tested negative for malaria and samples from people with previous Oropouche virus infection from Coari municipality, Amazonas state, Brazil. Basic clinical and demographic data were collected from the Brazilian Laboratory Environment Management System. We calculated the incidence of Oropouche fever cases with data from the Brazilian Ministry of Health and the 2022 Brazilian population census and conducted age-sex analyses. We used reverse transcription quantitative PCR to test for Oropouche virus RNA in samples and subsequently performed sequencing and phylogenetic analysis of viral isolates. We compared the phenotype of the 2023-24 epidemic isolate (AM0088) with the historical prototype strain BeAn19991 through assessment of titre, plaque number, and plaque size. We used a plaque reduction neutralisation test (PRNT
50 ) to assess the susceptibility of the novel isolate and BeAn19991 isolate to antibody neutralisation, both in serum samples from people previously infected with Oropouche virus and in blood collected from mice that were inoculated with either of the strains., Findings: 8639 (81·8%) of 10 557 laboratory-confirmed Oropouche fever cases from Jan 4, 2015, to Aug 10, 2024, occurred in 2024, which is 58·8 times the annual median of 147 cases (IQR 73-325). Oropouche virus infections were reported in all 27 federal units, with 8182 (77·5%) of 10 557 infections occurring in North Brazil. We detected Oropouche virus RNA in ten (11%) of 93 patients with acute febrile illness between Jan 1 and Feb 4, 2024, in Amazonas state. AM0088 had a significantly higher replication at 12 h and 24 h after infection in mammalian cells than the prototype strain. AM0088 had a more virulent phenotype than the prototype in mammalian cells, characterised by earlier plaque formation, between 27% and 65% increase in plaque number, and plaques between 2·4-times and 2·6-times larger. Furthermore, serum collected on May 2 and May 20, 2016, from individuals previously infected with Oropouche virus showed at least a 32-fold reduction in neutralising capacity (ie, median PRNT50 titre of 640 [IQR 320-640] for BeAn19991 vs <20 [ie, below the limit of detection] for AM0088) against the reassortant strain compared with the prototype., Interpretation: These findings provide a comprehensive assessment of Oropouche fever in Brazil and contribute to an improved understanding of the 2023-24 Oropouche virus re-emergence. Our exploratory in-vitro data suggest that the increased incidence might be related to a higher replication efficiency of a new Oropouche virus reassortant for which previous immunity shows lower neutralising capacity., Funding: São Paulo Research Foundation, Burroughs Wellcome Fund, Wellcome Trust, US National Institutes of Health, and Brazilian National Council for Scientific and Technological Development., Translation: For the Portuguese translation of the abstract see Supplementary Materials section., Competing Interests: Declaration of interests We declare no competing interests., (Copyright © 2024 The Author(s). Published by Elsevier Ltd. This is an Open Access article under the CC BY 4.0 license. Published by Elsevier Ltd.. All rights reserved.)- Published
- 2024
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29. Opicapone for the treatment of early wearing-off in levodopa-treated Parkinson's disease: pooled analysis of patient level data from two randomized open-label studies.
- Author
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Ferreira JJ, Lee JY, Ma HI, Jeon B, Poewe W, Antonini A, Stocchi F, Rodrigues DM, Fonseca MM, Castilla-Fernández G, Holenz J, Rocha JF, and Rascol O
- Subjects
- Humans, Male, Female, Middle Aged, Aged, Drug Therapy, Combination, Treatment Outcome, Parkinson Disease drug therapy, Levodopa administration & dosage, Levodopa pharmacology, Levodopa adverse effects, Antiparkinson Agents administration & dosage, Antiparkinson Agents adverse effects, Oxadiazoles administration & dosage, Oxadiazoles pharmacology
- Abstract
Background: The wearing-off phenomenon is a key driver of medication change for patients with Parkinson's disease (PD) treated with levodopa. Common first-line options include increasing the levodopa dose or adding a catechol-O-methyltransferase (COMT) inhibitor, but there are no trials comparing the efficacy of these approaches. We evaluated the effectiveness of adjunct opicapone versus an additional 100 mg levodopa dose in PD patients with early wearing-off using pooled data from 2 randomized studies., Methods: The ADOPTION study program included two similarly designed 4-week, open-label studies conducted in South Korea (NCT04821687) and Europe (NCT04990284). Patients with PD, treated with 3-4 daily doses of levodopa therapy and with signs of early wearing-off were randomized (1:1) to adjunct opicapone 50 mg or an additional dose of levodopa 100 mg. Patient-level data from the two studies were pooled., Results: The adjusted mean [SE] change from baseline to week 4 in absolute OFF time (key endpoint) was - 62.8 min [8.8] in the opicapone group and - 33.8 min [9.0] in the levodopa 100 mg group, the difference significantly favoring opicapone (- 29.0 [- 53.8, - 4.2] min, p = 0.02). Significant differences in the Movement Disorder Society-Unified Parkinson's Disease Rating Scale Part III subscore (- 4.1 with opicapone vs - 2.5 with levodopa 100 mg), also favored opicapone (- 1.7 [- 3.3, - 0.04], p < 0.05). Dyskinesia was the most frequently reported adverse event (opicapone 7.2% vs. levodopa 100 mg 4.2%)., Conclusions: In these short-term trials, introducing adjunct opicapone was more effective at reducing OFF time than adding another 100 mg levodopa dose in PD patients with early signs of wearing-off., (© 2024. The Author(s).)
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- 2024
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30. Hyperedge Representations with Hypergraph Wavelets: Applications to Spatial Transcriptomics.
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Sun X, Xu C, Rocha JF, Liu C, Hollander-Bodie B, Goldman L, DiStasio M, Perlmutter M, and Krishnaswamy S
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In many data-driven applications, higher-order relationships among multiple objects are essential in capturing complex interactions. Hypergraphs, which generalize graphs by allowing edges to connect any number of nodes, provide a flexible and powerful framework for modeling such higher-order relationships. In this work, we introduce hypergraph diffusion wavelets and describe their favorable spectral and spatial properties. We demonstrate their utility for biomedical discovery in spatially resolved transcriptomics by applying the method to represent disease-relevant cellular niches for Alzheimer's disease.
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- 2024
31. Chemical gasification: An alternative approach to in vitro maturation of bovine oocytes.
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Gómez-López DL, Velasco-Acosta DA, Chávez-Rodríguez A, Schneider A, Rocha JF, and Dubeibe-Marín DF
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- Animals, Cattle, Female, Culture Media, Blastocyst drug effects, Cumulus Cells drug effects, Carbon Dioxide pharmacology, Sodium Bicarbonate pharmacology, Citric Acid pharmacology, Embryo Culture Techniques veterinary, In Vitro Oocyte Maturation Techniques veterinary, In Vitro Oocyte Maturation Techniques methods, Oocytes drug effects, Fertilization in Vitro veterinary
- Abstract
This study aimed to evaluate the effect of chemical gasification and HEPES as alternative systems to pH control during in vitro maturation on bovine oocytes competence. Groups of 20 bovine cumulus oocytes complexes (COCs) were randomly distributed and cultured for 24 h in one of the following experimental groups: (i) chemical reaction (ChRG) system: CO2 generated from sodium bicarbonate and citric acid reaction (ii) culture media TCM-HEPES (HEPES-G); and (iii) control group (CNTG) in conventional incubator. After in vitro maturation (IVM), the COCs were in vitro fertilized (IVF), and in vitro cultivated (IVC) in a conventional incubator. We evaluated oocyte nuclear maturation, cleavage and blastocyst rates, in addition to the relative mRNA expression of BAX, BMP-15, AREG and EREG genes in oocytes and cumulus cells. The proportion of oocytes in metaphase II was higher in CNTG and ChRG (77.57% and 77.06%) than in the HEPES-G (65.32%; p = .0408 and .0492, respectively). The blastocyst production was similar between CNTG and ChRG (26.20% and 28.47%; p = .4232) and lower (p = .001) in the HEPES-G (18.71%). The relative mRNA expression of BAX gene in cumulus cells was significantly higher (p = .0190) in the HEPES-G compared to the CNTG. Additionally, the relative mRNA expression of BMP-15 gene was lower (p = .03) in oocytes from HEPES-G compared to the CNTG. In conclusion, inadequate atmosphere control has a detrimental effect on oocyte maturation. Yet, the use of chemical gasification can be an efficient alternative to bovine COCs cultivation., (© 2024 Wiley‐VCH GmbH. Published by John Wiley & Sons Ltd.)
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- 2024
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32. Reemergence of Oropouche virus between 2023 and 2024 in Brazil.
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Scachetti GC, Forato J, Claro IM, Hua X, Salgado BB, Vieira A, Simeoni CL, Barbosa ARC, Rosa IL, de Souza GF, Fernandes LCN, de Sena ACH, Oliveira SC, Singh CML, de Lima ST, de Jesus R, Costa MA, Kato RB, Rocha JF, Santos LC, Rodrigues JT, Cunha MP, Sabino EC, Faria NR, Weaver SC, Romano CM, Lalwani P, Proença-Módena JL, and de Souza WM
- Abstract
Background: Oropouche virus (OROV; species Orthobunyavirus oropoucheense ) is an arthropod-borne virus that has caused outbreaks of Oropouche fever in Central and South America since the 1950s. This study investigates virological factors contributing to the reemergence of Oropouche fever in Brazil between 2023 and 2024., Methods: In this study, we combined OROV genomic, molecular, and serological data from Brazil from 1 January 2015 to 29 June 2024, along with in vitro and in vivo characterization. Molecular screening data included 93 patients with febrile illness between January 2023 and February 2024 from the Amazonas State. Genomic data comprised two genomic OROV sequences from patients. Serological data were obtained from neutralizing antibody tests comparing the prototype OROV strain BeAn 19991 and the 2024 epidemic strain. Epidemiological data included aggregated cases reported to the Brazilian Ministry of Health from 1 January 2014 to 29 June 2024., Findings: In 2024, autochthonous OROV infections were detected in previously non-endemic areas across all five Brazilian regions. Cases were reported in 19 of 27 federal units, with 83.2% (6,895 of 8,284) of infections in Northern Brazil and a nearly 200-fold increase in incidence compared to reported cases over the last decade. We detected OROV RNA in 10.8% (10 of 93) of patients with febrile illness between December 2023 and May 2024 in Amazonas. We demonstrate that the 2023-2024 epidemic was caused by a novel OROV reassortant that replicated approximately 100-fold higher titers in mammalian cells compared to the prototype strain. The 2023-2024 OROV reassortant displayed plaques earlier than the prototype, produced 1.7 times more plaques, and plaque sizes were 2.5 larger compared to the prototype. Furthermore, serum collected in 2016 from previously OROV-infected individuals showed at least a 32-fold reduction in neutralizing capacity against the reassortment strain compared to the prototype., Interpretation: These findings provide a comprehensive assessment of Oropouche fever in Brazil and contribute to a better understanding of the 2023-2024 OROV reemergence. The recent increased incidence may be related to a higher replication efficiency of a new reassortant virus that also evades previous immunity., Competing Interests: Declaration of interests The authors declare no competing interests.
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- 2024
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33. Opicapone to Treat Early Wearing-off in Parkinson's Disease Patients: The Korean ADOPTION Trial.
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Lee JY, Ma HI, Ferreira JJ, Rocha JF, Sung YH, Song IU, Ahn TB, Kwon DY, Cheon SM, Kim JM, Lee CS, Lee PH, Park JH, Lee JH, Park MY, Kim SJ, Baik JS, Choi SM, Shin HW, Lee HW, Kang SY, and Jeon B
- Subjects
- Humans, Male, Female, Aged, Middle Aged, Catechol O-Methyltransferase Inhibitors therapeutic use, Catechol O-Methyltransferase Inhibitors pharmacology, Catechol O-Methyltransferase Inhibitors administration & dosage, Republic of Korea, Treatment Outcome, Parkinson Disease drug therapy, Levodopa therapeutic use, Levodopa administration & dosage, Antiparkinson Agents therapeutic use, Antiparkinson Agents administration & dosage, Oxadiazoles therapeutic use, Oxadiazoles administration & dosage
- Abstract
Background: Increasing levodopa (L-dopa)/dopa decarboxylase inhibitor (DDCI) daily dose or adding a catechol-O-methyltransferase (COMT) inhibitor to levodopa/DDCI therapy are strategies used to manage wearing-off symptoms in Parkinson's disease (PD) patients., Objectives: To evaluate the COMT inhibitor opicapone versus an additional dose of levodopa to treat early wearing-off in PD patients., Methods: ADOPTION was a randomized, parallel-group, open-label, Phase 4 study conducted in Korea. At baseline, eligible patients were randomized (1:1) to opicapone 50 mg (n = 87) or L-dopa 100 mg (n = 81) (added to current L-dopa/DDCI therapy) for 4 weeks. The main efficacy endpoint was change from baseline to end of study in absolute off time. Other endpoints included changes in on time, in Movement Disorder Society-Unified Parkinson's Disease Rating Scale and 8-item PD Questionnaire scores, and the Clinical and Patient Global Impression of Improvement/Change., Results: The adjusted mean in absolute off time was significantly greater for opicapone 50 mg than for L-dopa 100 mg (-62.1 vs. -16.7 minutes; P = 0.0015). Opicapone-treated patients also reported a greater reduction in the percentage of off time (P = 0.0015), a greater increase in absolute on time (P = 0.0338) and a greater increase in the percentage of on time (P = 0.0015). There were no significant differences in other secondary endpoints. The L-dopa equivalent daily dose was significantly higher in the opicapone group (750.9 vs. 690.0 mg; P = 0.0247), when a 0.5 conversion factor is applied., Conclusions: Opicapone 50 mg was more effective than an additional 100 mg L-dopa dose at decreasing off time in patients with PD and early wearing-off., (© 2024 The Authors. Movement Disorders Clinical Practice published by Wiley Periodicals LLC on behalf of International Parkinson and Movement Disorder Society.)
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- 2024
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34. OFF-times before, during, and after nighttime sleep periods in Parkinson's disease patients with motor fluctuations and the effects of opicapone: A post hoc analysis of diary data from BIPARK-1 and -2.
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Hauser RA, Videnovic A, Soares-da-Silva P, Liang GS, Olson K, Jen E, Rocha JF, and Klepitskaya O
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- Humans, Male, Female, Double-Blind Method, Middle Aged, Aged, Carbidopa pharmacology, Carbidopa administration & dosage, Drug Combinations, Wakefulness drug effects, Wakefulness physiology, Parkinson Disease drug therapy, Parkinson Disease physiopathology, Parkinson Disease complications, Sleep drug effects, Sleep physiology, Antiparkinson Agents therapeutic use, Antiparkinson Agents administration & dosage, Antiparkinson Agents pharmacology, Levodopa pharmacology, Levodopa administration & dosage, Oxadiazoles pharmacology, Oxadiazoles administration & dosage, Oxadiazoles therapeutic use
- Abstract
Introduction: In BIPARK-1 and BIPARK-2, addition of once-daily opicapone to levodopa/carbidopa significantly reduced daily "OFF"-time relative to placebo in adults with Parkinson's disease (PD) and motor fluctuations. Diary data from these studies were pooled and analyzed post hoc to characterize "OFF"-times around nighttime sleep and to explore the effects of opicapone 50 mg., Methods: "OFF" before sleep (OBS), "OFF during the nighttime sleep period" (ODNSP), early morning "OFF" (EMO), and duration of nighttime sleep and awake periods were analyzed descriptively at baseline. Mean changes from baseline to Week 14/15 (end of double-blind treatment) were analyzed using two-sided t-tests in participants with data for both visits., Results: At baseline, 88.3 % (454/514) of participants reported having OBS (34.0 %), ODNSP (17.1 %), or EMO (79.6 %). Those with ODNSP had substantially shorter mean duration of uninterrupted sleep (4.4 h) than the overall pooled population (7.1 h). At Week 14/15, mean decrease from baseline in ODNSP duration was significantly greater with opicapone than with placebo (-0.9 vs. -0.4 h, P < 0.05). In participants with ODNSP at baseline, the decrease in total time spent awake during the night-time sleep period was significantly greater with opicapone than with placebo (-1.0 vs. -0.4 h, P < 0.05), as was the reduction in percent time spent awake during the night-time sleep period (-12.8 % vs. -4.5 %, P < 0.05)., Conclusion: "OFF"-times around nighttime sleep were common in BIPARK-1 and BIPARK-2. Opicapone may improve sleep by decreasing the amount of time spent awake during the night in patients with PD who have night-time sleep period "OFF" episodes., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: R. A. Hauser has received speaking fees from Acorda, Amneal Pharmaceuticals, Cerevel, Inhibikase, Kyowa Kirin, Neurocrine Biosciences Ltd., Sunovion and Supernus; has received consulting fees from AbbVie Ltd., Acsel Health, Amneal Pharmaceuticals, Avanex Ltd., Biogen Ltd., BlueRock Therapeutics, EPI-Q, Forsee Pharmaceuticals, Global Kinetics, Inhibikase, Jazz Pharmaceuticals Ltd., KeifeRX, Krog and Partners, Kyowa Kirin, Magnolia Innovation, MDCE Suzhou, MedRhythms, Medsphere Ltd., Merz Ltd., Neurocrine Ltd., Neuroderm, Ovid Therapeutics, PD Neurotechnology Ltd., Pharma Two B, Regenxbio, Revance Ltd., Sage Therapeutics Ltd., Scion NeuroStim, Stoparkinson, Sunovion, Supernus Pharmaceuticals, Tolmar, Tremor Research Group, Tris Pharma Ltd., UCB, and Vivifi Biotech Ltd. R. A. Hauser serves on a scientific advisory board for Stoparkinson and Inhibikase. R. A. Hauser holds stock in Revance Therapeutics Ltd. and has stock options in Enterin, Inhibikase, and Axial Therapeutics. R. A. Hauser has received intellectual property interests from a PD Diary through his University. R. A. Hauser acknowledges a Center of Excellence grant from the Parkinson Foundation. R. A. Hauser's University has received research support from Annovis Bio Inc., Artizan Biosciences, Parkinson's & Movement Disorder Alliance, Inhibikase Therapeutics, AbbVie Inc., Aeon Biopharma, Biogen MA, Bukwang Pharmaceutical Co. Ltd., Cavion Inc., Cerevance Inc., Cerevel Therapeutics, Cynapsus Therapeutics, Enterin Inc., Genentech, Global Kinetics Corporation, Hoffman-La Roche Inc., Impax Laboratories, Integrative Research Laboratories Sweden, Lundbeck Inc., Michael J. Fox Foundation for Parkinson's Research, National Parkinson's Foundation, Neuraly Inc., Neurocrine Biosciences, Neuroderm, Pharma Two B Ltd., Revance Therapeutics, Sage Therapeutics, Sanofi Pharmaceuticals, Scion NeuroStim, SunPharma, and UCB BioPharma. A. Videnovic has served as a consultant to Alexion Pharmaceuticals. P. Soares-da-Silva and J. F. Francisco Rocha are employees of BIAL–Portela & C(a) SA. G. Liang, K. Olson, E. Jen, and O. Klepitskaya are employees of Neurocrine Biosciences., (Copyright © 2024 The Authors. Published by Elsevier Ltd.. All rights reserved.)
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- 2024
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35. Understanding of the role of serum creatinine in a subset of the Brazilian population.
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Cerqueira BP, Rocha JF, Barnes RF, Pepato PHM, Paim TS, De Nardi F, Hsu FA, Oguma JM, Ito LM, da Silva EYAP, Vizzuso-Oliveira A, Filho FDDS, Maia JVB, Mendez JDZ, Sato BB, Souza RM, Miyahara AK, and Kirsztajn GM
- Subjects
- Adult, Female, Humans, Male, Biomarkers, Brazil, Creatinine, Cross-Sectional Studies, Middle Aged, Renal Insufficiency, Chronic diagnosis
- Abstract
Introduction: Chronic kidney disease is usually asymptomatic, and its diagnosis depends on laboratory tests, with emphasis on serum creatinine and proteinuria., Objective: To assess knowledge on the role of serum creatinine as a biomarker of kidney function in a sample of the Brazilian population., Method: Cross-sectional observational study conducted in São Paulo (SP, Brazil), in which a random adult population was interviewed., Results: A total of 1138 subjects were interviewed, with a median age of 36 years old (27-52); 55.1% were female. Regarding the "creatinine" biomarker, 40.6% stated they had never performed such a test. When asked about their knowledge on the usefulness of this exam, only 19.6% knew its function. The other responses were "I don't know" (71.6%), evaluating heart function (0.9%) and liver function (7.8%). Of those who reported they had already taken a creatinine test, only 29.4% correctly identified the role of creatinine. When dividing the groups into "knows" and "does not know" the function of creatinine, a statistically significant difference (p < 0.05) was observed regarding level of education, female sex, being a healthcare student/worker, having ever measured creatinine, knowing someone with kidney disease and older age. In the multivariate analysis, the main variable related to knowing the creatinine role was having previously taken the test (OR 5.16; 95% CI 3.16-8.43, p < 0.001)., Conclusion: There is a significant lack of knowledge about creatinine and its use in checkups. The results indicate that greater efforts are needed from healthcare professionals to raise awareness on the role of serum creatinine.
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- 2024
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36. Tuning the Chemical and Electrochemical Properties of Paper-Based Carbon Electrodes by Pyrolysis of Polydopamine.
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Rocha JF, de Oliveira JC, Bettini J, Strauss M, Selmi GS, Okazaki AK, de Oliveira RF, Lima RS, and Santhiago M
- Abstract
Electrochemical paper-based analytical devices represent an important platform for portable, low-cost, affordable, and decentralized diagnostics. For this kind of application, chemical functionalization plays a pivotal role to ensure high clinical performance by tuning surface properties and the area of electrodes. However, controlling different surface properties of electrodes by using a single functionalization route is still challenging. In this work, we attempted to tune the wettability, chemical composition, and electroactive area of carbon-paper-based devices by thermally treating polydopamine (PDA) at different temperatures. PDA films were deposited onto pyrolyzed paper (PP) electrodes and thermally treated in the range of 300-1000 °C. After deposition of PDA, the surface is rich in nitrogen and oxygen, it is superhydrophilic, and it has a high electroactive area. As the temperature increases, the surface becomes hydrophobic, and the electroactive area decreases. The surface modifications were followed by Raman, X-ray photoelectron microscopy (XPS), laser scanning confocal microscopy (LSCM), contact angle, scanning electron microscopy (SEM-EDS), electrical measurements, transmission electron microscopy (TEM), and electrochemical experiments. In addition, the chemical composition of nitrogen species can be tuned on the surface. As a proof of concept, we employed PDA-treated surfaces to anchor [AuCl
4 ]- ions. After electrochemical reduction, we observed that it is possible to control the size of the nanoparticles on the surface. Our route opens a new avenue to add versatility to electrochemical interfaces in the field of paper-based electrochemical biosensors., Competing Interests: The authors declare no competing financial interest., (© 2023 The Authors. Published by American Chemical Society.)- Published
- 2023
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37. Genome-wide association study for growth traits in Blanco Orejinegro and Romosinuano cattle.
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Bejarano DH, Martínez RA, and Rocha JF
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- Humans, Cattle genetics, Animals, Phenotype, Genotype, Weaning, Polymorphism, Single Nucleotide, Genome-Wide Association Study veterinary, Genome
- Abstract
Growth traits are economically important characteristics for the genetic improvement of local cattle breeds. Genome-wide association studies (GWAS) provide valuable information to enhance the understanding on the genetics of complex traits. The aim of this study was to perform a GWAS to identify genomic regions and genes associated to birth weight, weaning weight adjusted for 240 days, 16 months, and 24 months weight in Romosinuano (ROMO) and Blanco Orejinegro (BON) cattle. A single-step genomic-BLUP was implemented using 596 BON and 569 ROMO individuals that were genotyped with an Illumina BovineSNP50 BeadChip. There were 25 regions of interest identified on different chromosomes, with few of them simultaneously associated with two or more growth traits and some were common to both breeds. The gene mapping allowed to find 173 annotations on these regions, from which 49 represent potential candidate genes with known growth-related functions in cattle and other species. Among the regions that were associated with several growth traits, that at 24 - 27 MB of BTA14, has important candidate genes such as LYPLA1, XKR4, TMEM68 and PLAG1. Another region of interest at 0.40-0.77 Mb of BTA23 was identified in both breeds, containing KHDRBS2 as a potential candidate gene influencing body weight. Future studies targeting these regions could provide more knowledge to uncover the genetic architecture underlying growth traits in BON and ROMO cattle. The genomic regions and genes identified in this study could be used to improve the prediction of genetic merit for growth traits in these creole cattle breeds., (© 2023. The Author(s).)
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- 2023
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38. Recent progress and future perspectives of polydopamine nanofilms toward functional electrochemical sensors.
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Rocha JF, Hasimoto LH, and Santhiago M
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- Electrochemical Techniques, Polymers chemistry, Indoles, Nanostructures chemistry, Biosensing Techniques
- Abstract
Since its discovery in 2007, polydopamine nanofilms have been widely used in many areas for surface functionalization. The simple and low-cost preparation method of the nanofilms with tunable thickness can incorporate amine and oxygen-rich chemical groups in virtually any interface. The remarkable advantages of this route have been successfully used in the field of electrochemical sensors. The self-adhesive properties of polydopamine are used to attach nanomaterials onto the electrode's surface and add chemical groups that can be explored to immobilize recognizing species for the development of biosensors. Thus, the combination of 2D materials, nanoparticles, and other materials with polydopamine has been successfully demonstrated to improve the selectivity and sensitivity of electrochemical sensors. In this review, we highlight some interesting properties of polydopamine and some applications where polydopamine plays an important role in the field of electrochemical sensors., (© 2023. Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2023
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39. Genomic variability and population structure of six Colombian cattle breeds.
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Martinez R, Bejarano D, Ramírez J, Ocampo R, Polanco N, Perez JE, Onofre HG, and Rocha JF
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- Cattle genetics, Animals, Colombia, Genomics, Hybridization, Genetic, Polymorphism, Single Nucleotide, Genetic Variation, Genome, Inbreeding
- Abstract
Analyses of the genetic diversity of indigenous cattle are essential for implementing conservation programs, promoting their sustainable use and maintaining productive advantages offered by these breeds in local conditions. The aim of this study was to investigate the genetic diversity and population structure of six Colombian cattle breeds: Blanco Orejinegro (BON), Costeño con Cuernos (CCC), Romosinuano (ROM), Sanmartinero (SAM), Casanareño (CAS), and Hartón del Valle (HDV). Two additional breed groups were included for comparison: Zebu (CEB) and a crossbreed of Colombian cattle breeds × Zebu. Genetic diversity within breeds was analyzed using expected heterozygosity (He), inbreeding coefficient (f), and runs of homozygosity (ROH). Population structure was assessed using model-based clustering (ADMIXTURE) and principal components analysis (PCA). Zebu cattle showed the lowest genetic diversity (He = 0.240). Breeds with the highest genetic diversity level were HDV and BON (He = 0.350 and 0.340, respectively). Inbreeding was lower for Colombian cattle breeds ranging between 0.005 and 0.045. Overall, the largest average genetic distance was found among the group of Colombian cattle breeds and Zebu, while the smallest was found between ROM and CCC. Model-based clustering revealed some level of admixture among HDV and CAS cattle which is consistent with their recent history. The results of the present study provide a useful insight on the genetic structure of Colombian cattle breeds., (© 2023. The Author(s).)
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- 2023
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40. Scalable and green formation of graphitic nanolayers produces highly conductive pyrolyzed paper toward sensitive electrochemical sensors.
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de Lima Tinoco MV, Fujii LR, Nicoliche CYN, Giordano GF, Barbosa JA, da Rocha JF, Dos Santos GT, Bettini J, Santhiago M, Strauss M, and Lima RS
- Abstract
While pyrolyzed paper (PP) is a green and abundant material that can provide functionalized electrodes with wide detection windows for a plethora of targets, it poses long-standing challenges against sensing assays such as poor electrical conductivity, with resistivities generally higher than 200.0 mΩ cm ( e.g. , gold and silver show resistivities 1000-fold lower, ∼0.2 mΩ cm). In this regard, the fundamental hypothesis that drives this work is whether a scalable, cost-effective, and eco-friendly strategy is capable of significantly reducing the resistivity of PP electrodes toward the development of sensitive electrochemical sensors, whether faradaic or capacitive. We address this hypothesis by simply annealing PP under an isopropanol atmosphere for 1 h, reaching resistivities as low as 7 mΩ cm. Specifically, the annealing of PP at 800 or 1000 °C under isopropanol vapor leads to the formation of a highly graphitic nanolayer (∼15 nm) on the PP surface, boosting conductivity as the delocalization of π electrons stemming from carbon sp
2 is favored. The reduction of carbonyl groups and the deposition of dehydrated isopropanol during the annealing process are hypothesized herein as the dominant PP graphitization mechanisms. Electrochemical analyses demonstrated the capability of the annealed PP to increase the charge-transfer kinetics, with the optimum heterogeneous standard rate constant being roughly 3.6 × 10-3 cm s-1 . This value is larger than the constants reported for other carbon electrodes and indium tin oxide. Furthermore, freestanding fingers of the annealed PP were prototyped using a knife plotter to fabricate impedimetric on-leaf electrodes. These wearable sensors ensured the real-time and in situ monitoring of the loss of water content from soy leaves, outperforming non-annealed electrodes in terms of reproducibility and sensitivity. Such an application is of pivotal importance for precision agriculture and development of agricultural inputs. This work addresses the foundations for the achievement of conductive PP in a scalable, low-cost, simple, and eco-friendly way, i.e. without producing any liquid chemical waste, providing new opportunities to translate PP-based sensitive electrochemical devices into practical use.- Published
- 2023
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41. Effect of Opicapone on Levodopa Pharmacokinetics in Patients with Fluctuating Parkinson's Disease.
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Ferreira JJ, Poewe W, Rascol O, Stocchi F, Antonini A, Moreira J, Guimarães B, Rocha JF, and Soares-da-Silva P
- Subjects
- Humans, Antiparkinson Agents adverse effects, Carbidopa therapeutic use, Catechol O-Methyltransferase, Catechol O-Methyltransferase Inhibitors therapeutic use, Cross-Over Studies, Levodopa adverse effects, Parkinson Disease drug therapy
- Abstract
Background: Inhibiting catechol-O-methyltransferase extends the plasma half-life of levodopa, potentially allowing physicians to optimize the levodopa regimen in patients with Parkinson's disease (PD) experiencing motor fluctuations., Objectives: To evaluate the effects of once-daily opicapone on levodopa plasma pharmacokinetics and motor response when added to two different levodopa dosing regimens., Methods: A total of 24 patients with PD and motor fluctuations were enrolled in an exploratory, open-label, modified cross-over trial. Participants first received levodopa/carbidopa 500/125 mg (five intakes) for 2 weeks and were then randomly assigned (1:1) to levodopa/carbidopa 400/100 mg given over either four or five daily intakes plus opicapone 50 mg for an additional 2 weeks. Levodopa 12-hour pharmacokinetics was the primary outcome (ie, excluding the effect of last/evening levodopa/carbidopa intake), with motor complications evaluated as secondary outcomes., Results: Over 12-hour pharmacokinetics and compared with five-intake levodopa/carbidopa 500/125 mg without opicapone, maximal levodopa concentrations were similar or nonsignificantly higher on both levodopa/carbidopa 400/100 mg regimens plus opicapone. Despite a 100 mg lower total levodopa/carbidopa daily dose, adding opicapone 50 mg at least doubled the levodopa plasma half-life and minimal concentrations, with a significant ≈30% increase in total exposure. The levodopa fluctuation index was only significantly lower for the five intakes plus opicapone regimen (difference of -71.8%; P < 0.0001). Modifications to levodopa pharmacokinetics were associated with decreased off time and increased on time., Conclusions: Combining opicapone 50 mg with a 100 mg lower daily dose of levodopa provides higher levodopa bioavailability with avoidance of trough levels. Despite the lower levodopa dose, modifying the levodopa pharmacokinetic profile with opicapone was associated with decreased off time and increased on time. © 2022 The Authors. Movement Disorders published by Wiley Periodicals LLC on behalf of International Parkinson and Movement Disorder Society., (© 2022 The Authors. Movement Disorders published by Wiley Periodicals LLC on behalf of International Parkinson and Movement Disorder Society.)
- Published
- 2022
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42. Opicapone as an Add-on to Levodopa in Patients with Parkinson's Disease Without Motor Fluctuations: Rationale and Design of the Phase III, Double-Blind, Randomised, Placebo-Controlled EPSILON Trial.
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Ferreira JJ, Poewe W, Rascol O, Stocchi F, Antonini A, Moreira J, Pereira A, Rocha JF, and Soares-da-Silva P
- Abstract
Introduction: Levodopa remains the cornerstone treatment for Parkinson's disease (PD) but its use is associated with the development of 'wearing-off' fluctuations and other motor and non-motor complications over time. Adding a catechol-O-methyltransferase (COMT) inhibitor to levodopa/dopa decarboxylase (DDC) inhibitor therapy reduces fluctuations in the profile of plasma levodopa levels following oral dosing, and can therefore be beneficial for the management of motor complications. The objective of the EPSILON study is to investigate the efficacy of opicapone (OPC; a third-generation, once-daily COMT inhibitor) in enhancing the clinical benefit of levodopa in patients in earlier stages of PD, without end-of-dose motor fluctuations., Methods: EPSILON is a phase III, double-blind, randomised, placebo-controlled and parallel-group study, designed to evaluate the efficacy and safety of OPC as add-on to levodopa/DDC inhibitor therapy in patients with early PD who do not exhibit signs of motor complications. Eligible patients will be randomised (1:1) to receive OPC 50 mg or placebo, in addition to their existing levodopa/DDC inhibitor therapy, over a 24-week, double-blind treatment period, after which they will have the option of entering an additional 1-year, open-label extension period, during which all patients will receive OPC 50 mg., Planned Outcomes: The primary efficacy endpoints are change in Movement Disorders Society Unified Parkinson's Disease Rating Scale (MDS-UPDRS) Part III total score from baseline to the end of the double-blind period (double-blind phase) and change in MDS-UPDRS Part IV total score from open-label baseline to the end of the open-label period (open-label phase). Secondary outcomes during the double-blind phase will include other measures of PD symptoms, including quality of life, non-motor symptoms, and development of motor fluctuations. Safety assessments will include evaluation of treatment-emergent adverse events, laboratory safety parameters, suicidality and impulse control disorders., Trial Registration: European Union Drug Regulating Authorities Clinical Trials Database (number 2020-005011-52)., (© 2022. The Author(s).)
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- 2022
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43. Biocompatible Wearable Electrodes on Leaves toward the On-Site Monitoring of Water Loss from Plants.
- Author
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Barbosa JA, Freitas VMS, Vidotto LHB, Schleder GR, de Oliveira RAG, da Rocha JF, Kubota LT, Vieira LCS, Tolentino HCN, Neckel IT, Gobbi AL, Santhiago M, and Lima RS
- Abstract
Impedimetric wearable sensors are a promising strategy for determining the loss of water content (LWC) from leaves because they can afford on-site and nondestructive quantification of cellular water from a single measurement. Because the water content is a key marker of leaf health, monitoring of the LWC can lend key insights into daily practice in precision agriculture, toxicity studies, and the development of agricultural inputs. Ongoing challenges with this monitoring are the on-leaf adhesion, compatibility, scalability, and reproducibility of the electrodes, especially when subjected to long-term measurements. This paper introduces a set of sensing material, technological, and data processing solutions that overwhelm such obstacles. Mass-production-suitable electrodes consisting of stand-alone Ni films obtained by well-established microfabrication methods or ecofriendly pyrolyzed paper enabled reproducible determination of the LWC from soy leaves with optimized sensibilities of 27.0 (Ni) and 17.5 kΩ %
-1 (paper). The freestanding design of the Ni electrodes was further key to delivering high on-leaf adhesion and long-term compatibility. Their impedances remained unchanged under the action of wind at velocities of up to 2.00 m s-1 , whereas X-ray nanoprobe fluorescence assays allowed us to confirm the Ni sensor compatibility by the monitoring of the soy leaf health in an electrode-exposed area. Both electrodes operated through direct transfer of the conductive materials on hairy soy leaves using an ordinary adhesive tape. We used a hand-held and low-power potentiostat with wireless connection to a smartphone to determine the LWC over 24 h. Impressively, a machine-learning model was able to convert the sensing responses into a simple mathematical equation that gauged the impairments on the water content at two temperatures (30 and 20 °C) with reduced root-mean-square errors (0.1% up to 0.3%). These data suggest broad applicability of the platform by enabling direct determination of the LWC from leaves even at variable temperatures. Overall, our findings may help to pave the way for translating "sense-act" technologies into practice toward the on-site and remote investigation of plant drought stress. These platforms can provide key information for aiding efficient data-driven management and guiding decision-making steps.- Published
- 2022
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44. Opicapone versus placebo in the treatment of Parkinson's disease patients with end-of-dose motor fluctuation-associated pain: rationale and design of the randomised, double-blind OCEAN (OpiCapone Effect on motor fluctuations and pAiN) trial.
- Author
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Chaudhuri KR, Odin P, Ferreira JJ, Antonini A, Rascol O, Kurtis MM, Storch A, Bannister K, Soares-da-Silva P, Costa R, Magalhães D, and Rocha JF
- Subjects
- Antiparkinson Agents, Catechol O-Methyltransferase therapeutic use, Humans, Oxadiazoles, Pain drug therapy, Pain etiology, Parkinson Disease complications, Parkinson Disease drug therapy
- Abstract
Background: Optimisation of dopaminergic therapy may alleviate fluctuation-related pain in Parkinson's disease (PD). Opicapone (OPC) is a third-generation, once-daily catechol-O-methyltransferase inhibitor shown to be generally well tolerated and efficacious in reducing OFF-time in two pivotal trials in patients with PD and end-of-dose motor fluctuations. The OpiCapone Effect on motor fluctuations and pAiN (OCEAN) trial aims to investigate the efficacy of OPC 50 mg in PD patients with end-of-dose motor fluctuations and associated pain, when administered as adjunctive therapy to existing treatment with levodopa/dopa decarboxylase inhibitor (DDCi)., Methods: OCEAN is a Phase IV, international, multicentre, randomised, double-blind, placebo-controlled, parallel-group, interventional trial in PD patients with end-of-dose motor fluctuations and associated pain. It consists of a 1-week screening period, 24-week double-blind treatment period and 2-week follow-up period. Eligible patients will be randomised 1:1 to OPC 50 mg or placebo once daily while continuing current treatment with levodopa/DDCi and other chronic, stable anti-PD and/or analgesic treatments. The primary efficacy endpoint is change from baseline in Domain 3 (fluctuation-related pain) of the King's Parkinson's disease Pain Scale (KPPS). The key secondary efficacy endpoint is change from baseline in Domain B (anxiety) of the Movement Disorder Society-sponsored Non-Motor rating Scale (MDS-NMS). Additional secondary efficacy assessments include other domains and total scores of the KPPS and MDS-NMS, the Parkinson's Disease Questionnaire (PDQ-8), the MDS-sponsored Unified Parkinson's Disease Rating Scale (MDS-UPDRS) Parts III and IV, Clinical and Patient's Global Impressions of Change, and change in functional status via Hauser's diary. Safety assessments include the incidence of treatment-emergent adverse events. The study will be conducted in approximately 140 patients from 50 clinical sites in Germany, Italy, Portugal, Spain and the United Kingdom. Recruitment started in February 2021 and the last patient is expected to complete the study by late 2022., Discussion: The OCEAN trial will help determine whether the use of adjunctive OPC 50 mg treatment can improve fluctuation-associated pain in PD patients with end-of-dose motor fluctuations. The robust design of OCEAN will address the current lack of reliable evidence for dopaminergic-based therapy in the treatment of PD-associated pain., Trial Registration: EudraCT number 2020-001175-32 ; registered on 2020-08-07., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
45. Safety, Tolerability, and Pharmacokinetics of FAAH Inhibitor BIA 10-2474: A Double-Blind, Randomized, Placebo-Controlled Study in Healthy Volunteers.
- Author
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Rocha JF, Santos A, Gama H, Moser P, Falcão A, Pressman P, Wallace Hayes A, and Soares-da-Silva P
- Subjects
- Administration, Oral, Central Nervous System physiopathology, Cyclic N-Oxides administration & dosage, Cyclic N-Oxides pharmacokinetics, Double-Blind Method, Drug Administration Schedule, Drug Dosage Calculations, Early Termination of Clinical Trials, Enzyme Inhibitors administration & dosage, Enzyme Inhibitors pharmacokinetics, Female, France, Healthy Volunteers, Humans, Male, Patient Safety, Pyridines administration & dosage, Pyridines pharmacokinetics, Risk Assessment, Risk Factors, Amidohydrolases antagonists & inhibitors, Central Nervous System drug effects, Cyclic N-Oxides adverse effects, Enzyme Inhibitors adverse effects, Pyridines adverse effects
- Abstract
This study evaluated the safety, tolerability, pharmacokinetics, and pharmacodynamics of BIA 10-2474, a fatty acid amide hydrolase (FAAH) inhibitor, after first administration to healthy male and female participants. Participants (n = 116) were recruited into this phase I, double-blind, randomized, placebo-controlled, single ascending dose and multiple ascending dose (10-day) study. The primary outcome was the safety and tolerability of BIA 10-2474. Secondary outcomes were pharmacokinetics of BIA 10-2474 and pharmacodynamics, considering plasma concentrations of anandamide and three other fatty acid amides (FAAs) and leukocyte FAAH activity. Single oral doses of 0.25-100 mg and repeated oral doses of 2.5-50 mg were evaluated. BIA 10-2474 was well tolerated up to 100 mg as a single dose and up to 20 mg once daily for 10 days. In the cohort receiving repeated administrations of 50 mg, there were central nervous system adverse events in five of six participants, one with fatal outcome, which led to early termination of the study. BIA 10-2474 showed a linear relationship between dose and area under plasma concentration-time curve (AUC) across the entire dose range and reached steady state within 5-6 days of administration, with an accumulation ratio, based on AUC
0-24h , of <2 on Day 10. BIA 10-2474 was rapidly absorbed with a mean terminal elimination half-life of 8-10 hours (Day 10). BIA 10-2474 caused reversible, dose-related increases in plasma FAAs. In conclusion, we propose that these data, as well as the additional data generated since the clinical trial was stopped, do not provide a complete mechanistic explanation for the tragic fatality., (© 2021 The Authors. Clinical Pharmacology & Therapeutics published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics.)- Published
- 2022
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46. Assessing the effects of PMM2 variants on protein stability.
- Author
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Quelhas D, Carneiro J, Lopes-Marques M, Jaeken J, Martins E, Rocha JF, Teixeira Carla SS, Ferreira CR, Sousa SF, and Azevedo L
- Subjects
- Molecular Dynamics Simulation, Phosphotransferases (Phosphomutases) chemistry, Protein Conformation, Protein Multimerization, Protein Stability, Mutation, Missense, Phosphotransferases (Phosphomutases) genetics
- Abstract
Phosphomannomutase 2 deficiency, PMM2-CDG, is the most frequent disorder of protein N-glycosylation. It is an autosomal recessive disease with a broad clinical and biochemical phenotype. Trying to predict the impact of novel variants is often a challenge due to the high number of variants and the difficulty to establish solid genotype-phenotype correlations. A potential useful strategy is to use computational chemistry calculations as a tool from which relevant information on the structural impact of novel variants may be deduced. Here we present our analyses based on four well-known PMM2 deleterious variants (p.(Leu32Arg), p.(Asp65Tyr), p.(Phe119Leu), p.(Arg141His)) and the polymorphic p.(Glu197Ala) for which we have predicted the effect on protein stability. Our work predicts the effect of different amino acid residues on the conformation and stability of PMM2. These computational simulations are, therefore, an extremely useful methodology which, in combination with routinely used in silico methods of pathogenicity prediction, may help to reveal the structural impact of novel variants at the protein level, potentially leading to a better understanding of target biological molecules., Competing Interests: Declaration of Competing Interest All authors hereby declare that they have no financial or personal relationships with other people or organizations that could inappropriately influence (bias) this work., (Copyright © 2021 Elsevier Inc. All rights reserved.)
- Published
- 2021
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47. Congenital epulis of the newborn: a case report.
- Author
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Cavalcante JFN, Souza Costa MDA, Fixina JNC, Pereira EL, Cipriano OB, Gomes de Queiroz R, Rolim AKA, Ferreira do Nascimento GJ, Rocha JF, and Penha ES
- Subjects
- Alveolar Process, Female, Humans, Infant, Newborn, Maxilla, Gingival Neoplasms diagnosis, Gingival Neoplasms surgery, Granular Cell Tumor
- Abstract
The objective of this case report is to describe a congenital epulis of the newborn. A 10-day-old female neonate was brought to a dental clinic for examination of an intraoral lesion that was present at birth. No systemic changes were noted during the extraoral examination. During the intraoral examination, a nodular exophytic lesion was found in the maxillary left alveolar ridge. The appearance suggested a congenital epulis. The nodular, pedunculated lesion had a diameter of 13 mm, firm consistency, smooth surface, and color varying from pink to red. Newborns with such lesions usually have difficulty breastfeeding and may experience respiratory difficulties. The patient underwent an excisional biopsy under local infiltrative anesthesia with 2% lidocaine. Histopathologic examination of the lesion confirmed the diagnosis of congenital epulis. There were no postoperative complications. At the follow-up examination 8 days after the biopsy, her weight and length had already increased, and the oral mucosa had a normal appearance. At 8 months of age, she demonstrated continued gains in weight and length. Dentists must familiarize themselves with abnormalities that may affect the oral cavity of neonates as well as the differential diagnoses and treatment options.
- Published
- 2021
48. Aβ 31-35 Decreases Neprilysin-Mediated Alzheimer's Amyloid-β Peptide Degradation.
- Author
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Leite JP, Lete MG, Fowler SB, Gimeno A, Rocha JF, Sousa SF, Webster CI, Jiménez-Bar Bero JJ, and Gales L
- Subjects
- Amyloid, Humans, Neprilysin, Plaque, Amyloid, Alzheimer Disease, Amyloid beta-Peptides
- Abstract
Alzheimer's disease is associated with the deposition of extracellular senile plaques, made primarily of amyloid-β (Aβ), particularly peptides Aβ
1-42 and Aβ1-40 . Neprilysin, or neutral endopeptidase (NEP), catalyzes proteolysis of the amyloid peptides (Aβ) and is recognized as one of the major regulators of the levels of these peptides in the brain, preventing Aβ accumulation and plaque formation. Here, we used a combination of techniques to elucidate the mechanism of Aβ binding and cleavage by NEP. Our findings indicate that the Aβ31- X cleavage products remain bound to the neprilysin active site, reducing proteolytic activity. Interestingly, it was already shown that this Aβ31-35 sequence is also critical for recognition of Aβ peptides by other targets, such as the serpin-enzyme complex receptor in neuronal cells.- Published
- 2021
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49. Redefining the strategy for the use of COMT inhibitors in Parkinson's disease: the role of opicapone.
- Author
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Jenner P, Rocha JF, Ferreira JJ, Rascol O, and Soares-da-Silva P
- Subjects
- Antiparkinson Agents therapeutic use, Catechol O-Methyltransferase, Humans, Levodopa therapeutic use, Oxadiazoles, Catechol O-Methyltransferase Inhibitors therapeutic use, Parkinson Disease drug therapy
- Abstract
Introduction: Levodopa remains the gold-standard Parkinson's disease (PD) treatment, but the inevitable development of motor complications has led to intense activity in pursuit of its optimal delivery., Areas Covered: Peripheral inhibition of dopa-decarboxylase has long been considered an essential component of levodopa treatment at every stage of illness. In contrast, only relatively recently have catechol-O-methyltransferase (COMT) inhibitors been utilized to block the other major pathway of degradation and optimize levodopa delivery to the brain. First and second-generation COMT inhibitors were deficient because of toxicity, sub-optimal pharmacokinetics or a short duration of effect. As such, they have only been employed once 'wearing-off' has developed. However, the third-generation COMT inhibitor, opicapone has overcome these difficulties and exhibits long-lasting enzyme inhibition without the toxicity observed with previous generations of COMT inhibitors. In clinical trials and real-world PD studies opicapone improves the levodopa plasma profile and results in a significant improvement in ON time in 'fluctuating' disease, but it has not yet been included in the algorithm for early treatment., Expert Opinion: This review argues for a shift in the positioning of COMT inhibition with opicapone in the PD algorithm and lays out a pathway for proving its effectiveness in early disease.
- Published
- 2021
- Full Text
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50. The milk-derived lactoferrin inhibits V-ATPase activity by targeting its V1 domain.
- Author
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Santos-Pereira C, Rocha JF, Fernandes HS, Rodrigues LR, Côrte-Real M, and Sousa SF
- Subjects
- Adenosine Triphosphate metabolism, Binding Sites, Catalytic Domain, Enzyme Inhibitors chemistry, Hydrolysis, Lactoferrin chemistry, Molecular Docking Simulation, Molecular Dynamics Simulation, Protein Binding, Protein Conformation, Protein Interaction Domains and Motifs, Structure-Activity Relationship, Vacuolar Proton-Translocating ATPases chemistry, Vacuolar Proton-Translocating ATPases metabolism, Enzyme Inhibitors pharmacology, Lactoferrin pharmacology, Vacuolar Proton-Translocating ATPases pharmacology
- Abstract
Lactoferrin (Lf), a bioactive milk protein, exhibits strong anticancer and antifungal activities. The search for Lf targets and mechanisms of action is of utmost importance to enhance its effective applications. A common feature among Lf-treated cancer and fungal cells is the inhibition of a proton pump called V-ATPase. Lf-driven V-ATPase inhibition leads to cytosolic acidification, ultimately causing cell death of cancer and fungal cells. Given that a detailed elucidation of how Lf and V-ATPase interact is still missing, herein we aimed to fill this gap by employing a five-stage computational approach. Molecular dynamics simulations of both proteins were performed to obtain a robust sampling of their conformational landscape, followed by clustering, which allowed retrieving representative structures, to then perform protein-protein docking. Subsequently, molecular dynamics simulations of the docked complexes and free binding energy calculations were carried out to evaluate the dynamic binding process and build a final ranking based on the binding affinities. Detailed atomist analysis of the top ranked complexes clearly indicates that Lf binds to the V
1 cytosolic domain of V-ATPase. Particularly, our data suggest that Lf binds to the interfaces between A/B subunits, where the ATP hydrolysis occurs, thus inhibiting this process. The free energy decomposition analysis further identified key binding residues that will certainly aid in the rational design of follow-up experimental studies, hence bridging computational and experimental biochemistry., (Copyright © 2021 Elsevier B.V. All rights reserved.)- Published
- 2021
- Full Text
- View/download PDF
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