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Graph neural networks (GNNs) are the dominant approach to solving machine learning problems defined over graphs. Despite much theoretical and empirical work in recent years, our understanding of finer-grained aspects of architectural design for GNNs remains impoverished. In this paper, we consider the benefits of architectures that maintain and update edge embeddings. On the theoretical front, under a suitable computational abstraction for a layer in the model, as well as memory constraints on the embeddings, we show that there are natural tasks on graphical models for which architectures leveraging edge embeddings can be much shallower. Our techniques are inspired by results on time-space tradeoffs in theoretical computer science. Empirically, we show architectures that maintain edge embeddings almost always improve on their node-based counterparts -- frequently significantly so in topologies that have ``hub'' nodes., Comment: 25 pages, 2 figures

We introduce Imagen 3, a latent diffusion model that generates high quality images from text prompts. We describe our quality and responsibility evaluations. Imagen 3 is preferred over other state-of-the-art (SOTA) models at the time of evaluation. In addition, we discuss issues around safety and representation, as well as methods we used to minimize the potential harm of our models.

The study of population dynamics originated with early sociological works but has since extended into many fields, including biology, epidemiology, evolutionary game theory, and economics. Most studies on population dynamics focus on the problem of prediction rather than control. Existing mathematical models for control in population dynamics are often restricted to specific, noise-free dynamics, while real-world population changes can be complex and adversarial. To address this gap, we propose a new framework based on the paradigm of online control. We first characterize a set of linear dynamical systems that can naturally model evolving populations. We then give an efficient gradient-based controller for these systems, with near-optimal regret bounds with respect to a broad class of linear policies. Our empirical evaluations demonstrate the effectiveness of the proposed algorithm for control in population dynamics even for non-linear models such as SIR and replicator dynamics.

In this expository note we show that the learning parities with noise (LPN) assumption is robust to weak dependencies in the noise distribution of small batches of samples. This provides a partial converse to the linearization technique of [AG11]. The material in this note is drawn from a recent work by the authors [GMR24], where the robustness guarantee was a key component in a cryptographic separation between reinforcement learning and supervised learning., Comment: This note draws heavily from arXiv:2404.03774

Supervised learning is often computationally easy in practice. But to what extent does this mean that other modes of learning, such as reinforcement learning (RL), ought to be computationally easy by extension? In this work we show the first cryptographic separation between RL and supervised learning, by exhibiting a class of block MDPs and associated decoding functions where reward-free exploration is provably computationally harder than the associated regression problem. We also show that there is no computationally efficient algorithm for reward-directed RL in block MDPs, even when given access to an oracle for this regression problem. It is known that being able to perform regression in block MDPs is necessary for finding a good policy; our results suggest that it is not sufficient. Our separation lower bound uses a new robustness property of the Learning Parities with Noise (LPN) hardness assumption, which is crucial in handling the dependent nature of RL data. We argue that separations and oracle lower bounds, such as ours, are a more meaningful way to prove hardness of learning because the constructions better reflect the practical reality that supervised learning by itself is often not the computational bottleneck., Comment: 112 pages, 3 figures

Recent studies indicated GPT-4 outperforms online crowd workers in data labeling accuracy, notably workers from Amazon Mechanical Turk (MTurk). However, these studies were criticized for deviating from standard crowdsourcing practices and emphasizing individual workers' performances over the whole data-annotation process. This paper compared GPT-4 and an ethical and well-executed MTurk pipeline, with 415 workers labeling 3,177 sentence segments from 200 scholarly articles using the CODA-19 scheme. Two worker interfaces yielded 127,080 labels, which were then used to infer the final labels through eight label-aggregation algorithms. Our evaluation showed that despite best practices, MTurk pipeline's highest accuracy was 81.5%, whereas GPT-4 achieved 83.6%. Interestingly, when combining GPT-4's labels with crowd labels collected via an advanced worker interface for aggregation, 2 out of the 8 algorithms achieved an even higher accuracy (87.5%, 87.0%). Further analysis suggested that, when the crowd's and GPT-4's labeling strengths are complementary, aggregating them could increase labeling accuracy., Comment: Accepted By CHI 2024

It is well-known that the statistical performance of Lasso can suffer significantly when the covariates of interest have strong correlations. In particular, the prediction error of Lasso becomes much worse than computationally inefficient alternatives like Best Subset Selection. Due to a large conjectured computational-statistical tradeoff in the problem of sparse linear regression, it may be impossible to close this gap in general. In this work, we propose a natural sparse linear regression setting where strong correlations between covariates arise from unobserved latent variables. In this setting, we analyze the problem caused by strong correlations and design a surprisingly simple fix. While Lasso with standard normalization of covariates fails, there exists a heterogeneous scaling of the covariates with which Lasso will suddenly obtain strong provable guarantees for estimation. Moreover, we design a simple, efficient procedure for computing such a "smart scaling." The sample complexity of the resulting "rescaled Lasso" algorithm incurs (in the worst case) quadratic dependence on the sparsity of the underlying signal. While this dependence is not information-theoretically necessary, we give evidence that it is optimal among the class of polynomial-time algorithms, via the method of low-degree polynomials. This argument reveals a new connection between sparse linear regression and a special version of sparse PCA with a near-critical negative spike. The latter problem can be thought of as a real-valued analogue of learning a sparse parity. Using it, we also establish the first computational-statistical gap for the closely related problem of learning a Gaussian Graphical Model.

Recent ubiquity and disruptive impacts of large language models (LLMs) have raised concerns about their potential to be misused (.i.e, generating large-scale harmful and misleading content). To combat this emerging risk of LLMs, we propose a novel "Fighting Fire with Fire" (F3) strategy that harnesses modern LLMs' generative and emergent reasoning capabilities to counter human-written and LLM-generated disinformation. First, we leverage GPT-3.5-turbo to synthesize authentic and deceptive LLM-generated content through paraphrase-based and perturbation-based prefix-style prompts, respectively. Second, we apply zero-shot in-context semantic reasoning techniques with cloze-style prompts to discern genuine from deceptive posts and news articles. In our extensive experiments, we observe GPT-3.5-turbo's zero-shot superiority for both in-distribution and out-of-distribution datasets, where GPT-3.5-turbo consistently achieved accuracy at 68-72%, unlike the decline observed in previous customized and fine-tuned disinformation detectors. Our codebase and dataset are available at https://github.com/mickeymst/F3., Comment: Accepted at EMNLP 2023

The key assumption underlying linear Markov Decision Processes (MDPs) is that the learner has access to a known feature map $\phi(x, a)$ that maps state-action pairs to $d$-dimensional vectors, and that the rewards and transitions are linear functions in this representation. But where do these features come from? In the absence of expert domain knowledge, a tempting strategy is to use the ``kitchen sink" approach and hope that the true features are included in a much larger set of potential features. In this paper we revisit linear MDPs from the perspective of feature selection. In a $k$-sparse linear MDP, there is an unknown subset $S \subset [d]$ of size $k$ containing all the relevant features, and the goal is to learn a near-optimal policy in only poly$(k,\log d)$ interactions with the environment. Our main result is the first polynomial-time algorithm for this problem. In contrast, earlier works either made prohibitively strong assumptions that obviated the need for exploration, or required solving computationally intractable optimization problems. Along the way we introduce the notion of an emulator: a succinct approximate representation of the transitions that suffices for computing certain Bellman backups. Since linear MDPs are a non-parametric model, it is not even obvious whether polynomial-sized emulators exist. We show that they do exist and can be computed efficiently via convex programming. As a corollary of our main result, we give an algorithm for learning a near-optimal policy in block MDPs whose decoding function is a low-depth decision tree; the algorithm runs in quasi-polynomial time and takes a polynomial number of samples. This can be seen as a reinforcement learning analogue of classic results in computational learning theory. Furthermore, it gives a natural model where improving the sample complexity via representation learning is computationally feasible.

Analyzing vast textual data and summarizing key information from electronic health records imposes a substantial burden on how clinicians allocate their time. Although large language models (LLMs) have shown promise in natural language processing (NLP), their effectiveness on a diverse range of clinical summarization tasks remains unproven. In this study, we apply adaptation methods to eight LLMs, spanning four distinct clinical summarization tasks: radiology reports, patient questions, progress notes, and doctor-patient dialogue. Quantitative assessments with syntactic, semantic, and conceptual NLP metrics reveal trade-offs between models and adaptation methods. A clinical reader study with ten physicians evaluates summary completeness, correctness, and conciseness; in a majority of cases, summaries from our best adapted LLMs are either equivalent (45%) or superior (36%) compared to summaries from medical experts. The ensuing safety analysis highlights challenges faced by both LLMs and medical experts, as we connect errors to potential medical harm and categorize types of fabricated information. Our research provides evidence of LLMs outperforming medical experts in clinical text summarization across multiple tasks. This suggests that integrating LLMs into clinical workflows could alleviate documentation burden, allowing clinicians to focus more on patient care., Comment: 27 pages, 19 figures

Score matching is an alternative to maximum likelihood (ML) for estimating a probability distribution parametrized up to a constant of proportionality. By fitting the ''score'' of the distribution, it sidesteps the need to compute this constant of proportionality (which is often intractable). While score matching and variants thereof are popular in practice, precise theoretical understanding of the benefits and tradeoffs with maximum likelihood -- both computational and statistical -- are not well understood. In this work, we give the first example of a natural exponential family of distributions such that the score matching loss is computationally efficient to optimize, and has a comparable statistical efficiency to ML, while the ML loss is intractable to optimize using a gradient-based method. The family consists of exponentials of polynomials of fixed degree, and our result can be viewed as a continuous analogue of recent developments in the discrete setting. Precisely, we show: (1) Designing a zeroth-order or first-order oracle for optimizing the maximum likelihood loss is NP-hard. (2) Maximum likelihood has a statistical efficiency polynomial in the ambient dimension and the radius of the parameters of the family. (3) Minimizing the score matching loss is both computationally and statistically efficient, with complexity polynomial in the ambient dimension., Comment: 25 Pages

The translation of AI-generated brain metastases (BM) segmentation into clinical practice relies heavily on diverse, high-quality annotated medical imaging datasets. The BraTS-METS 2023 challenge has gained momentum for testing and benchmarking algorithms using rigorously annotated internationally compiled real-world datasets. This study presents the results of the segmentation challenge and characterizes the challenging cases that impacted the performance of the winning algorithms. Untreated brain metastases on standard anatomic MRI sequences (T1, T2, FLAIR, T1PG) from eight contributed international datasets were annotated in stepwise method: published UNET algorithms, student, neuroradiologist, final approver neuroradiologist. Segmentations were ranked based on lesion-wise Dice and Hausdorff distance (HD95) scores. False positives (FP) and false negatives (FN) were rigorously penalized, receiving a score of 0 for Dice and a fixed penalty of 374 for HD95. Eight datasets comprising 1303 studies were annotated, with 402 studies (3076 lesions) released on Synapse as publicly available datasets to challenge competitors. Additionally, 31 studies (139 lesions) were held out for validation, and 59 studies (218 lesions) were used for testing. Segmentation accuracy was measured as rank across subjects, with the winning team achieving a LesionWise mean score of 7.9. Common errors among the leading teams included false negatives for small lesions and misregistration of masks in space.The BraTS-METS 2023 challenge successfully curated well-annotated, diverse datasets and identified common errors, facilitating the translation of BM segmentation across varied clinical environments and providing personalized volumetric reports to patients undergoing BM treatment.

Sparse linear regression is a central problem in high-dimensional statistics. We study the correlated random design setting, where the covariates are drawn from a multivariate Gaussian $N(0,\Sigma)$, and we seek an estimator with small excess risk. If the true signal is $t$-sparse, information-theoretically, it is possible to achieve strong recovery guarantees with only $O(t\log n)$ samples. However, computationally efficient algorithms have sample complexity linear in (some variant of) the condition number of $\Sigma$. Classical algorithms such as the Lasso can require significantly more samples than necessary even if there is only a single sparse approximate dependency among the covariates. We provide a polynomial-time algorithm that, given $\Sigma$, automatically adapts the Lasso to tolerate a small number of approximate dependencies. In particular, we achieve near-optimal sample complexity for constant sparsity and if $\Sigma$ has few ``outlier'' eigenvalues. Our algorithm fits into a broader framework of feature adaptation for sparse linear regression with ill-conditioned covariates. With this framework, we additionally provide the first polynomial-factor improvement over brute-force search for constant sparsity $t$ and arbitrary covariance $\Sigma$.

We present ACL OCL, a scholarly corpus derived from the ACL Anthology to assist Open scientific research in the Computational Linguistics domain. Integrating and enhancing the previous versions of the ACL Anthology, the ACL OCL contributes metadata, PDF files, citation graphs and additional structured full texts with sections, figures, and links to a large knowledge resource (Semantic Scholar). The ACL OCL spans seven decades, containing 73K papers, alongside 210K figures. We spotlight how ACL OCL applies to observe trends in computational linguistics. By detecting paper topics with a supervised neural model, we note that interest in "Syntax: Tagging, Chunking and Parsing" is waning and "Natural Language Generation" is resurging. Our dataset is available from HuggingFace (https://huggingface.co/datasets/WINGNUS/ACL-OCL)., Comment: To appear in EMNLP2023

Most existing large-scale academic search engines are built to retrieve text-based information. However, there are no large-scale retrieval services for scientific figures and tables. One challenge for such services is understanding scientific figures' semantics, such as their types and purposes. A key obstacle is the need for datasets containing annotated scientific figures and tables, which can then be used for classification, question-answering, and auto-captioning. Here, we develop a pipeline that extracts figures and tables from the scientific literature and a deep-learning-based framework that classifies scientific figures using visual features. Using this pipeline, we built the first large-scale automatically annotated corpus, ACL-Fig, consisting of 112,052 scientific figures extracted from ~56K research papers in the ACL Anthology. The ACL-Fig-Pilot dataset contains 1,671 manually labeled scientific figures belonging to 19 categories. The dataset is accessible at https://huggingface.co/datasets/citeseerx/ACL-fig under a CC BY-NC license., Comment: 6 pages, 4 figures, accepted by the AAAI-23 Workshop on Scientific Document Understanding

The volume of scientific output is creating an urgent need for automated tools to help scientists keep up with developments in their field. Semantic Scholar (S2) is an open data platform and website aimed at accelerating science by helping scholars discover and understand scientific literature. We combine public and proprietary data sources using state-of-the-art techniques for scholarly PDF content extraction and automatic knowledge graph construction to build the Semantic Scholar Academic Graph, the largest open scientific literature graph to-date, with 200M+ papers, 80M+ authors, 550M+ paper-authorship edges, and 2.4B+ citation edges. The graph includes advanced semantic features such as structurally parsed text, natural language summaries, and vector embeddings. In this paper, we describe the components of the S2 data processing pipeline and the associated APIs offered by the platform. We will update this living document to reflect changes as we add new data offerings and improve existing services., Comment: 8 pages, 6 figures

While copper-graphene (Cu/Gr) composites have been promising materials due to their theoretically high strength and conductivity, their design has been hampered by the large number of variables affecting their properties. We applied four different Machine Learning (ML) models to manually collected datasets compiling the yield strength and ultimate tensile strength of graphene-reinforced copper composites processed with powder metallurgy techniques. Our results indicate that ML models can predict the mechanical properties of Cu/Gr composites with satisfactory accuracy. Feature analysis provided new insights into the most important factors that affect these properties., Comment: 12 pages, 6 figures, 5 tables