77 results on '"Ross J. Davidson"'
Search Results
2. Light Activated Release of Nitrile Ligands from trans-Ru(L)(PPh3)2(nitrile) Complexes
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Ross J. Davidson, Yu-Ting Hsu, Dmitry S. Yufit, and Andrew Beeby
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Chemistry ,QD1-999 - Published
- 2024
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3. Exploring the Impact of the HOMO–LUMO Gap on Molecular Thermoelectric Properties: A Comparative Study of Conjugated Aromatic, Quinoidal, and Donor–Acceptor Core Systems
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Nickel Blankevoort, Pablo Bastante, Ross J. Davidson, Rebecca J. Salthouse, Abdalghani H. S. Daaoub, Pilar Cea, Santiago Martin Solans, Andrei S. Batsanov, Sara Sangtarash, Martin R. Bryce, Nicolas Agrait, and Hatef Sadeghi
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Chemistry ,QD1-999 - Published
- 2024
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4. Taqman PACMAN: a simple molecular approach for positive rapid antigen test confirmation during periods of low prevalence
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Gregory R. McCracken, Glenn Patriquin, Todd F. Hatchette, Ross J. Davidson, Barbara Goodall, Lisa Barrett, James MacDonald, Charles Heinstein, Janice Pettipas, John Ross, and Jason J. LeBlanc
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SARS-CoV-2 ,COVID-19 ,rapid antigen ,molecular ,extraction ,PCR ,Microbiology ,QR1-502 - Abstract
ABSTRACTAntigen-based rapid diagnostic tests (Ag-RDTs) were widely deployed to enhance SARS-CoV-2 testing capacity during the COVID-19 pandemic. Consistent with national guidance for low prevalence settings, positive Ag-RDTs were confirmed using nucleic acid amplification tests (NAATs) to avoid false positive results. However, increasing demands for positive Ag-RDT confirmation competed with other testing priorities in clinical laboratories. This work hypothesized that real-time RT-PCR without nucleic acid extraction (NAE) would be sufficiently sensitive to support positive Ag-RDT confirmation. Ag-RDT and NAAT results from community-based asymptomatic testing sites prior to the omicron variant wave were compared to calculate the weekly false positive rate (FPR) and false detection rate (FDR). Real-time RT-PCR was compared with and without NAE using 752 specimens previously tested positive for SARS-CoV-2 using commercial NAATs and 344 specimens from Ag-RDT-positive individuals. The impact of SARS-CoV-2 prevalence on laboratory resources required to sustain Ag-RDT confirmation was modeled for the RT-PCR with and without NAE. Overall, FPR was low [0.07% (222/330,763)] in asymptomatic testing sites, but FDR was high [30.7% (222/724)]. When RT-PCR was compared with and without NAE, 100% concordance was obtained with NAAT-positive specimens, including those from Ag-RDT-positive individuals. NAE-free RT-PCR significantly reduced time to results, human resources, and overall costs. A 30.7% FDR reaffirms the need for NAAT-based confirmation of positive Ag-RDT results during low SARS-CoV-2 prevalence. NAE-free RT-PCR was shown to be a simple and cost-sparing NAAT-based solution for positive Ag-RDT confirmation, and its implementation supported data-driven broader Ag-RDT deployment into communities, workplaces, and households.IMPORTANCERapid antigen testing for SARS-CoV-2 was widely deployed during the COVID-19 pandemic. In settings of low prevalence, national guidance recommends that positive antigen test results be confirmed with molecular testing. Given the high testing burden on clinical laboratories during the COVID-19 pandemic, the high volume of positive antigen tests submitted for confirmatory testing posed challenges for laboratory workflow. This study demonstrated that a simple PCR method without prior nucleic acid purification is an accurate and cost-effective solution for positive rapid antigen test confirmation. Implementing this method allowed molecular confirmatory testing for positive antigen tests to be sustained as antigen testing was expanded into large populations such as workplaces, schools, and households.
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- 2024
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5. Connectivity-Dependent Conductance of 2,2′-Bipyridine-Based Metal Complexes
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Yahia Chelli, Nicolò Ferri, Andrea Vezzoli, Ross J. Davidson, James Morris, Richard J. Nichols, Simon J. Higgins, Sara Sangtarash, Hatef Sadeghi, Dmitry S. Yufit, and Andrew Beeby
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Chemistry ,QD1-999 - Published
- 2023
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6. Avoiding False-Positive SARS-CoV-2 Rapid Antigen Test Results with Point-of-Care Molecular Testing on Residual Test Buffer
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Jason J. LeBlanc, Gregory R. McCracken, Barbara Goodall, Todd F. Hatchette, Lisa Barrett, John Ross, Ross J. Davidson, and Glenn Patriquin
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COVID-19 ,SARS-CoV-2 ,rapid ,antigen ,buffer ,false-positive ,Microbiology ,QR1-502 - Abstract
ABSTRACT Antigen-based rapid diagnostic tests (Ag-RDTs) have been widely used for the detection of SARS-CoV-2 during the coronavirus disease 2019 (COVID-19) pandemic. In settings of low disease prevalence, such as asymptomatic community testing, national guidelines recommend confirmation of positive Ag-RDT results with a nucleic acid amplification test (NAAT). This often requires patients to be recalled for repeat specimen recollection and subsequent testing in reference laboratories. This project assessed the use of a point-of-care molecular NAAT for SARS-CoV-2 detection (i.e., ID NOW), which was performed on-site at a volunteer-led asymptomatic community testing site on the residual test buffer (RTB) from positive Ag-RDTs. The ID NOW NAAT assay was performed on RTB from two Ag-RDTs: the Abbott Panbio and BTNX Rapid Response assays. Results of ID NOW were compared to real-time RT-PCR at a reference laboratory. Along with investigations into the clinical performance of ID NOW on RTB, analytical specificity was assessed with a panel of various respiratory organisms. Of the Ag-RDTs results evaluated, all 354 Ag-RDTs results characterized as true positives by RT-PCR were accurately identified with ID NOW testing of RTB. No SARS-CoV-2 detections by ID NOW were observed from 10 specimens characterized as false-positive Ag-RDTs, or from contrived specimens with various respiratory organisms. The use of on-site molecular testing on RTB provides a suitable option for rapid confirmatory testing of positive Ag-RDTs, thereby obviating the need for specimen recollection for molecular testing at local reference laboratories. IMPORTANCE During the COVID-19 pandemic, rapid antigen tests have been widely used for the detection of SARS-CoV-2. These simple devices allow rapid test results. However, false-positive results may occur. As such, individuals with positive rapid tests often must return to testing centers to have a second swab collected, which is then transported to a specialized laboratory for confirmation using molecular tests. As an alternative to requiring a repeat visit and a prolonged turn-around time for result confirmation, this project evaluated whether the leftover material from rapid antigen tests could be confirmed directly on a portable point-of-care molecular instrument. Using this approach, molecular confirmation of positive antigen tests could be performed in less than 15 min, and the results were equivalent to laboratory-based confirmation. This procedure eliminates the need for individuals to return to testing centers following a positive rapid antigen test and ensures accurate antigen test results through on-site confirmation.
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- 2022
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7. Generation of False-Positive SARS-CoV-2 Antigen Results with Testing Conditions outside Manufacturer Recommendations: A Scientific Approach to Pandemic Misinformation
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Glenn Patriquin, Ross J. Davidson, Todd F. Hatchette, Breanne M. Head, Edgard Mejia, Michael G. Becker, Adrienne Meyers, Paul Sandstrom, Jacob Hatchette, Ava Block, Nicole Smith, John Ross, and Jason J. LeBlanc
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COVID-19 ,SARS-CoV-2 ,antigen ,false positive ,Panbio ,clinical methods ,Microbiology ,QR1-502 - Abstract
ABSTRACT Antigen-based rapid diagnostics tests (Ag-RDTs) are useful tools for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) detection. However, misleading demonstrations of the Abbott Panbio coronavirus disease 2019 (COVID-19) Ag-RDT on social media claimed that SARS-CoV-2 antigen could be detected in municipal water and food products. To offer a scientific rebuttal to pandemic misinformation and disinformation, this study explored the impact of using the Panbio SARS-CoV-2 assay with conditions falling outside manufacturer recommendations. Using Panbio, various water and food products, laboratory buffers, and SARS-CoV-2-negative clinical specimens were tested with and without manufacturer buffer. Additional experiments were conducted to assess the role of each Panbio buffer component (tricine, NaCl, pH, and Tween 20) as well as the impact of temperature (4°C, 20°C, and 45°C) and humidity (90%) on assay performance. Direct sample testing (without the kit buffer) resulted in false-positive signals resembling those obtained with SARS-CoV-2 positive controls tested under proper conditions. The likely explanation of these artifacts is nonspecific interactions between the SARS-CoV-2-specific conjugated and capture antibodies, as proteinase K treatment abrogated this phenomenon, and thermal shift assays showed pH-induced conformational changes under conditions promoting artifact formation. Omitting, altering, and reverse engineering the kit buffer all supported the importance of maintaining buffering capacity, ionic strength, and pH for accurate kit function. Interestingly, the Panbio assay could tolerate some extremes of temperature and humidity outside manufacturer claims. Our data support strict adherence to manufacturer instructions to avoid false-positive SARS-CoV-2 Ag-RDT reactions, otherwise resulting in anxiety, overuse of public health resources, and dissemination of misinformation. IMPORTANCE With the Panbio severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) antigen test being deployed in over 120 countries worldwide, understanding conditions required for its ideal performance is critical. Recently on social media, this kit was shown to generate false positives when manufacturer recommendations were not followed. While erroneous results from improper use of a test may not be surprising to some health care professionals, understanding why false positives occur can help reduce the propagation of misinformation and provide a scientific rebuttal for these aberrant findings. This study demonstrated that the kit buffer’s pH, ionic strength, and buffering capacity were critical components to ensure proper kit function and avoid generation of false-positive results. Typically, false positives arise from cross-reacting or interfering substances; however, this study demonstrated a mechanism where false positives were generated under conditions favoring nonspecific interactions between the two antibodies designed for SARS-CoV-2 antigen detection. Following the manufacturer instructions is critical for accurate test results.
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- 2021
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8. Novel Iron-Chelator DIBI Inhibits Staphylococcus aureus Growth, Suppresses Experimental MRSA Infection in Mice and Enhances the Activities of Diverse Antibiotics in vitro
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Maria del Carmen Parquet, Kimberley A. Savage, David S. Allan, Ross J. Davidson, and Bruce E. Holbein
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iron chelator ,Staphylococcus aureus ,DIBI ,antibiotic ,hydroxypyridinone ,deferiprone ,Microbiology ,QR1-502 - Abstract
DIBI, a purpose-designed hydroxypyridinone-containing iron-chelating antimicrobial polymer was studied for its anti-staphylococcal activities in vitro in comparison to deferiprone, the chemically related, small molecule hydroxypyridinone chelator. The sensitivities of 18 clinical isolates of Staphylococcus aureus from human, canine and bovine infections were determined. DIBI was strongly inhibitory to all isolates, displaying approximately 100-fold more inhibitory activity than deferiprone when compared on their molar iron-binding capacities. Sensitivity to DIBI was similar for both antibiotic-resistant and -sensitive isolates, including hospital- and community-acquired (United States 300) MRSA. DIBI inhibition was primarily bacteriostatic in nature at low concentration and was reversible by addition of Fe. DIBI also exhibited in vivo anti-infective activity in two distinct MRSA ATCC43300 infection and colonization models in mice. In a superficial skin wound infection model, topical application of DIBI provided a dose-dependent suppression of infection along with reduced wound inflammation. Intranasal DIBI reduced staphylococcal burden by >2 log in a MRSA nares carriage model. DIBI was also examined for its influence on antibiotic activities with a reference isolate ATCC6538, typically utilized to assess new antimicrobials. Sub-bacteriostatic concentrations of DIBI resulted in Fe-restricted growth and this physiological condition displayed increased sensitivity to GEN, CIP, and VAN. DIBI did not impair antibiotic activity but rather it enhanced overall killing. Importantly, recovery growth of survivors that typically followed an initial sub-MIC antibiotic killing phase was substantially suppressed by DIBI for each of the antibiotics examined. DIBI has promise for restricting staphylococcal infection on its own, regardless of the isolate’s animal source or antibiotic resistance profile. DIBI also has potential for use in combination with various classes of currently available antibiotics to improve their responses.
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- 2018
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9. Divergent Approach for Tris-Heteroleptic Cyclometalated Iridium Complexes Using Triisopropylsilylethynyl-Substituted Synthons
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Robert M. Edkins, Yu-Ting Hsu, Mark A. Fox, Dmitry Yufit, Andrew Beeby, and Ross J. Davidson
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Inorganic Chemistry ,Organic Chemistry ,QD ,Physical and Theoretical Chemistry - Abstract
Bis-heteroleptic cyclometalated iridium complexes of the form Ir(La)2(acac), where La is a substituted 2-phenylpyridine derivative and acac is an acetylacetonato ligand, are a useful class of luminescent organometallic complexes for a range of applications. Related tris-heteroleptic complexes of the form Ir(La)(Lb)(acac) offer the potential advantage of greater functionality through the use of two different cyclometalated ligands but are, in general, more difficult to obtain. We report the synthesis of divergent bis- and tris-heteroleptic triisopropylsilylethynyl-substituted intermediate complexes that can be diversified using a "chemistry-on-the-complex" approach. We demonstrate the methodology through one-pot deprotection and Sonogashira cross-coupling of the intermediate complexes with para-R-aryliodides (R = H, SMe, and CN). The photophysical and electrochemical behaviors of the resultant bis- and tris-heteroleptic complexes are compared, and it is shown that the tris-heteroleptic complexes exhibit subtly different emission and redox properties to the bis-heteroleptic complexes, such as further red-shifted emission maxima and lower extinction coefficients, which can be attributed to the reduced symmetry. It is demonstrated, supported by DFT and time-dependent DFT calculations, that the charge-transfer character of the emission can be altered via variation of the terminal substituent; the introduction of an electron-withdrawing cyano group in the terminal position leads to a significant red shift, while the introduction of an SMe group can substantially increase the emission quantum yield. Most notably, this convenient synthetic approach reduces the need to perform the often challenging isolation of tris-heteroleptic complexes to a single divergent intermediate, which will simplify access to families of complexes of the form Ir(La)(Lb)(acac).
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- 2022
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10. Divergent Approach for
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Robert M, Edkins, Yu-Ting, Hsu, Mark A, Fox, Dmitry, Yufit, Andrew, Beeby, and Ross J, Davidson
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- 2022
11. Avoiding false positive SARS-CoV-2 rapid antigen test results with point-of-care molecular testing on residual test buffer
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Jason J LeBlanc, Gregory R. McCracken, Barbara Goodall, Todd F Hatchette, Lisa Barrett, John Ross, Ross J Davidson, and Glenn Patriquin
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ObjectivesAntigen-based rapid diagnostic tests (Ag-RDTs) have been widely used for the detection of SARS-CoV-2 during the Covid-19 pandemic. In settings of low disease prevalence, such as asymptomatic community testing, national guidelines recommend molecular confirmation of positive Ag-RDT results. This often requires patients to be recalled for repeat specimen recollection and subsequent testing in reference laboratories. This project assessed the use of a point-of-care molecular method for SARS-CoV-2 detection on-site at a volunteer-led asymptomatic community testing site, using the residual test buffer (RTB) from positive Ag-RDTs.MethodsThe Abbott COVID-19 ID NOW assay was performed on RTB from two Ag-RDTs: the Abbott Panbio COVID-19 Ag Rapid Test Device and the BTNX Rapid Response COVID-19 Antigen Rapid Test Device. All RTBs were tested using real-time RT-PCR at a reference laboratory using the ThermoFisher TaqPath COVID-19 Combo kit which was used to assign positive Ag-RDTs results as true or false positives. Analytical specificity of the ID NOW was assessed with a panel of various respiratory organisms.ResultsOf 419 positive Ag-RDTs from 5148 tests performed, ID NOW testing of the RTB was positive in 100% of the samples characterized as true positives by RT-PCR. No SARS-CoV-2 detections by ID NOW were observed from 10 specimens characterized as false positive Ag-RDTs, or from contrived specimens with various respiratory organisms.ConclusionsThe use of on-site molecular testing on RTB provides a suitable option for rapid confirmatory testing of positive Ag-RDTs, thereby obviating the need for specimen recollection for molecular testing at local reference laboratories.
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- 2022
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12. Generation of false positive SARS-CoV-2 antigen results with testing conditions outside manufacturer recommendations: A scientific approach to pandemic misinformation
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Paul Sandstrom, John Ross, Ross J. Davidson, Adrienne F. A. Meyers, Ava Block, Breanne M Head, Edgard Mejia, Jacob Hatchette, Jason J. LeBlanc, Glenn Patriquin, Nicole Smith, Todd F. Hatchette, and Michael G. Becker
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2019-20 coronavirus outbreak ,Coronavirus disease 2019 (COVID-19) ,Antigen ,business.industry ,Food products ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Pandemic ,Medicine ,Misinformation ,business ,Biotechnology - Abstract
ObjectivesAntigen-based rapid diagnostics tests (Ag-RDTs) are useful tools for SARS-CoV-2 detection. However, misleading demonstrations of the Abbott Panbio COVID-19 Ag-RDT on social media claimed that SARS-CoV-2 antigen could be detected in municipal water and food products. To offer a scientific rebuttal to pandemic misinformation and disinformation, this study explored the impact of using the Panbio SARS-CoV-2 assay with conditions falling outside of manufacturer recommendations.MethodsUsing Panbio, various water and food products, laboratory buffers, and SARS-CoV-2-negative clinical specimens were tested, with and without manufacturer buffer. Additional experiments were conducted to assess the role of each Panbio buffer component (tricine, NaCl, pH, and tween-20), as well as the impact of temperatures (4°C, 20°C, and 45°C) and humidity (90%) on assay performance.ResultsDirect sample testing (without the kit buffer), resulted in false positive signals resembling those obtained with SARS-CoV-2-positive controls tested under proper conditions. The likely explanation of these artifacts is non-specific interactions between the SARS-CoV-2-specific conjugated and capture antibodies, as proteinase K treatment abrogated this phenomenon, and thermal shift assays showed pH-induced conformational changes under conditions promoting artifact formation. Omitting, altering, and reverse engineering the kit buffer all supported the importance of maintaining buffering capacity, ionic strength, and pH for accurate kit function. Interestingly, the Panbio assay could tolerate some extremes of temperature and humidity outside of manufacturer claims.ConclusionsOur data support strict adherence to manufacturer instructions to avoid false positive SARS-CoV-2 Ag-RDT reactions, otherwise resulting in anxiety, overuse of public health resources, and dissemination of misinformation.
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- 2021
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13. Comparison of antimicrobial resistance patterns in Streptococcus pneumoniae from respiratory and blood cultures in Canadian hospitals from 2007–16
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Canward, Daryl J. Hoban, Irene Martin, George G. Zhanel, Heather J. Adam, Michael R. Mulvey, Alyssa R Golden, Walter Demczuk, James A. Karlowsky, Melanie R. Baxter, and Ross J. Davidson
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Adult ,Male ,Microbiology (medical) ,Canada ,Adolescent ,Bacteremia ,Microbial Sensitivity Tests ,Drug resistance ,Serogroup ,medicine.disease_cause ,Pneumococcal Infections ,Microbiology ,Young Adult ,Antibiotic resistance ,Drug Resistance, Bacterial ,Streptococcus pneumoniae ,medicine ,Humans ,Pharmacology (medical) ,Blood culture ,Respiratory Tract Infections ,Aged ,Pharmacology ,medicine.diagnostic_test ,business.industry ,Broth microdilution ,Middle Aged ,Antimicrobial ,Hospitals ,Anti-Bacterial Agents ,Penicillin ,Infectious Diseases ,Blood Culture ,Female ,Quellung reaction ,business ,medicine.drug - Abstract
ObjectivesTo compare the epidemiology and antimicrobial susceptibility patterns of Streptococcus pneumoniae collected from respiratory and blood culture samples in Canada between 2007 and 2016.MethodsS. pneumoniae strains were obtained from Canadian hospitals as part of the ongoing national surveillance study, CANWARD. Isolates were serotyped using the Quellung method. Antimicrobial susceptibility testing was performed using the CLSI broth microdilution method. MDR and XDR were defined as resistance to three or more and five or more classes of antimicrobials, respectively.ResultsOf the 2581 S. pneumoniae isolates collected, 1685 (65.3%) and 896 (34.7%) were obtained from respiratory and blood samples, respectively. Respiratory isolates demonstrated lower rates of antimicrobial susceptibility than blood isolates to penicillin, ceftriaxone, clarithromycin, clindamycin, doxycycline and trimethoprim/sulfamethoxazole (P ≤ 0.03). From 2007 to 2016, invasive isolates demonstrated trends towards increasing penicillin susceptibility and decreasing clarithromycin susceptibility. MDR was significantly higher in respiratory S. pneumoniae compared with blood (9.1% versus 4.5%, P ConclusionsS. pneumoniae from respiratory samples demonstrated lower antimicrobial susceptibilities and higher MDR in a greater diversity of serotypes than isolates obtained from blood. Many serotypes were associated with one specific specimen source, while others were associated with both; genetic characterization is necessary to elucidate the specific factors influencing the ability of these serotypes to commonly cause both invasive and non-invasive disease.
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- 2019
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14. Selective Anchoring Groups for Molecular Electronic Junctions with ITO Electrodes
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Inco J. Planje, Ross J. Davidson, Andrea Vezzoli, Abdalghani Daaoub, Sara Sangtarash, Hatef Sadeghi, Santiago Martín, Pilar Cea, Colin J. Lambert, Andrew Beeby, Simon J. Higgins, and Richard J. Nichols
- Abstract
Indium tin oxide (ITO) is an attractive substrate for single-molecule electronics since it is transparent while maintaining electrical conductivity. Although it has been used before as a contacting electrode in single-molecule electrical studies, these studies have been limited to the use of carboxylic acid terminal groups for binding molecular wires to the ITO substrates. There is thus the need to investigate other anchoring groups with potential for binding effectively to ITO. With this aim, we have investigated the single-molecule conductance of a series of eight tolane or “tolane-like” molecular wires with a variety of surface binding groups. We first used gold–molecule–gold junctions to identify promising targets for ITO selectivity. We then assessed the propensity and selectivity of carboxylic acid, cyanoacrylic acid, and pyridinium-squarate to bind to ITO and promote the formation of molecular heterojunctions. We found that pyridinium squarate zwitterions display excellent selectivity for binding to ITO over gold surfaces, with contact resistivity comparable to that of carboxylic acids. These single-molecule experiments are complemented by surface chemical characterization with X-ray photoelectron spectroscopy, quartz crystal microbalance, contact angle determination, and nanolithography using an atomic force miscroscope. Finally, we report the first density-functional theory calculations involving ITO electrodes to model charge transport through ITO–molecule–gold heterojunctions.
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- 2021
15. Selective Anchoring Groups for Molecular Electronic Junctions with ITO Electrodes
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Pilar Cea, Simon J. Higgins, Hatef Sadeghi, Richard J. Nichols, Santiago Martín, Abdalghani Daaoub, Colin J. Lambert, Sara Sangtarash, Andrea Vezzoli, Inco J. Planje, Andrew Beeby, Ross J. Davidson, Engineering and Physical Sciences Research Council (UK), Fundação para a Ciência e a Tecnologia (Portugal), European Commission, European Research Council, Royal Society (UK), Ministerio de Economía y Competitividad (España), Leverhulme Trust, Agencia Estatal de Investigación (España), Ministerio de Ciencia, Innovación y Universidades (España), and Gobierno de Aragón
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Fluid Flow and Transfer Processes ,Materials science ,Process Chemistry and Technology ,010401 analytical chemistry ,Electric Conductivity ,Tin Compounds ,Bioengineering ,02 engineering and technology ,Substrate (electronics) ,Quartz crystal microbalance ,021001 nanoscience & nanotechnology ,01 natural sciences ,digestive system ,0104 chemical sciences ,Indium tin oxide ,Contact angle ,Molecular wire ,Nanolithography ,Chemical engineering ,X-ray photoelectron spectroscopy ,Electrode ,Electronics ,0210 nano-technology ,Instrumentation ,Electrodes - Abstract
Indium tin oxide (ITO) is an attractive substrate for single-molecule electronics since it is transparent while maintaining electrical conductivity. Although it has been used before as a contacting electrode in single-molecule electrical studies, these studies have been limited to the use of carboxylic acid terminal groups for binding molecular wires to the ITO substrates. There is thus the need to investigate other anchoring groups with potential for binding effectively to ITO. With this aim, we have investigated the single-molecule conductance of a series of eight tolane or “tolane-like” molecular wires with a variety of surface binding groups. We first used gold–molecule–gold junctions to identify promising targets for ITO selectivity. We then assessed the propensity and selectivity of carboxylic acid, cyanoacrylic acid, and pyridinium-squarate to bind to ITO and promote the formation of molecular heterojunctions. We found that pyridinium squarate zwitterions display excellent selectivity for binding to ITO over gold surfaces, with contact resistivity comparable to that of carboxylic acids. These single-molecule experiments are complemented by surface chemical characterization with X-ray photoelectron spectroscopy, quartz crystal microbalance, contact angle determination, and nanolithography using an atomic force miscroscope. Finally, we report the first density-functional theory calculations involving ITO electrodes to model charge transport through ITO–molecule–gold heterojunctions., This work was supported by EPSRC under Grants EP/M005046/1 (Single-Molecule Photo-Spintronics, Liverpool), EP/M029522/1 (Single Molecule Plasmoelectronics, Liverpool), EP/M029204/1 (Single Molecule Plasmoelectronics, Durham), EP/N017188/1, EP/M014452/1, EP/P027156/1, and EP/N03337X/1. Support from the European Commission is provided by the FET Open project 767187 – QuIET. A.V. acknowledges funding from the Royal Society (URF\R1\191241) and thanks Dr. Richard J. Brooke and Prof. Walther Schwarzacher for assistance in developing the Python script used for data processing. I.J.P. would like to thank Vivien Walter for his help with coding some of the data analysis procedures. S.S. thanks the Leverhulme Trust for funding (Early Career Fellowship ECF-2018-375). H.S. thanks UKRI for funding (Future Leaders Fellowship MR/S015329/2). S.M. and P.C. acknowledge financial assistance from Ministerio de Ciencia e Innovación from Spain and fondos FEDER in the framework of projects MAT2016-78257-R and PID2019-105881RB-I00 and support from Gobierno de Aragón through the grant numbers LMP33-18 and E31_20R with European Social Fund (Construyendo Europa desde Aragón).
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- 2021
16. Conductance Behavior of Tetraphenyl-Aza-BODIPYs
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Yu-Ting Hsu, Ross J. Davidson, Richard J. Nichols, Dmitry S. Yufit, David C. Milan, Andrew Beeby, Ali K. Ismael, Andrei Markin, Colin J. Lambert, and Simon J. Higgins
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Thesaurus (information retrieval) ,Materials science ,Conductance ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Crystallography ,Molecular wire ,Search engine ,General Energy ,Electrical resistance and conductance ,Physical and Theoretical Chemistry ,0210 nano-technology - Abstract
We studied the electrical conductance of single-molecule junctions formed from molecular wires with four anchor groups. Three tetraphenyl-aza-BODIPYs with four or two thiomethyl anchor groups were synthesized, and their single-molecule conductance was measured using break-junction-STM. Using DFT based calculations these compounds were shown to display a combination of a high and low conductance, depending on the molecule's connectivity in the junction. A scissor correction is employed to obtain the corrected HOMO-LUMO gaps and a tight binding model (TBM) is used to highlight the role of transport through the pi system of the tetraphenyl-aza-BODIPY central unit. The three higher-conductance geometries follow the sequence 3 > 4 > 2, which demonstrates that their conductances are correlated with the number of anchors.
- Published
- 2020
17. Emission Tuning of Ir(N∧C)2(pic)-Based Complexes via Torsional Twisting of Picolinate Substituents
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Ross J. Davidson, Andrew Beeby, Yu-Ting Hsu, and Dmitry S. Yufit
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010405 organic chemistry ,Ligand ,Dimer ,Organic Chemistry ,Substituent ,chemistry.chemical_element ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,Inorganic Chemistry ,chemistry.chemical_compound ,Crystallography ,chemistry ,OLED ,Iridium ,Physical and Theoretical Chemistry ,Torsional angle ,Luminescence - Abstract
Pyridine-2-carboxylate (pic) has been employed extensively as a blue-shifting ancillary ligand in the production of cyclometalated iridium complexes used in OLEDs, but surprisingly, further elaboration of this ligand has largely been unexplored. In this work we demonstrate a simple and versatile route for modifying picolinate ligands coordinated to iridium. Reacting a μ-chloro iridium(C∧N) dimer (where C∧N is a phenylpyridine-based ligand) with 4-bromopicolinic acid (HpicBr) yields the corresponding iridium(C∧N)2(picBr) complexes, which were readily modified by a Suzuki–Miyaura reaction to give the corresponding aryl-substituted picolinate complexes. The luminescent behavior of these complexes shows that by restricting the torsional angle between the substituent and pic the emission can be shifted by up to 77 nm.
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- 2018
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18. Exploring the Chemistry and Photophysics of Substituted Picolinates Positional Isomers in Iridium(III) Bisphenylpyridine Complexes
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Andrew Beeby, Ross J. Davidson, Chandni Bhagani, Yu-Ting Hsu, and Dmitry S. Yufit
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010405 organic chemistry ,Ligand ,Chemistry ,Dimer ,Organic Chemistry ,chemistry.chemical_element ,Sonogashira coupling ,010402 general chemistry ,Ring (chemistry) ,Photochemistry ,01 natural sciences ,0104 chemical sciences ,Inorganic Chemistry ,chemistry.chemical_compound ,Polymer chemistry ,Structural isomer ,Reactivity (chemistry) ,Iridium ,Physical and Theoretical Chemistry ,Luminescence - Abstract
A simple and versatile route for modifying picolinate ligands coordinated to iridium is described. Reacting a μ-chloro iridium(C∧N) dimer (where C∧N is a phenylpyridine-based ligand) with bromopicolinic acid (HpicBr) yields the corresponding iridium(C∧N)2(picBr) complexes (1–4 and 11), which were readily modified by a Sonogashira reaction to give eight alkyne-substituted picolinate complexes (5–10, 12, and 13). The luminescent behavior of these complexes shows that the position of substitution about the picolinate ring has an effect on both photophysical behavior as well as the reactivity.
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- 2017
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19. Erratum for Savage et al., 'Iron Restriction to Clinical Isolates of Candida albicans by the Novel Chelator DIBI Inhibits Growth and Increases Sensitivity to Azoles In Vitro and In Vivo in a Murine Model of Experimental Vaginitis'
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Bruce E. Holbein, Maria del Carmen Parquet, Elizabeth A. Lilly, Kimberley A. Savage, David S. Allan, Paul L. Fidel, and Ross J. Davidson
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Pharmacology ,biology ,Chemistry ,biology.organism_classification ,medicine.disease ,Molecular biology ,In vitro ,Infectious Diseases ,In vivo ,Murine model ,medicine ,Pharmacology (medical) ,Candida albicans ,Vaginitis - Abstract
Volume 62, no. 8, e02576-17, 2018, [https://doi.org/10.1128/AAC.02576-17][1]. This article was published on 27 July 2018 with the second author's surname incorrectly indexed as “del Carmen Parquet” instead of “Parquet.” This has been corrected in the current version, posted on 7 December
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- 2019
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20. Turning the tap : conformational control of quantum interference to modulate single molecule conductance
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Chun Tang, Hatef Sadeghi, Afaf Alqorashi, Douglas I. Trupp, Chenxu Zhu, Wenjing Hong, Marcus Korb, Feng Jiang, Sara Sangtarash, Norah Algethami, Masnun Naher, Ross J. Davidson, Alexandre N. Sobolev, Haining Zheng, Colin J. Lambert, Junyang Liu, Ruihao Li, Paul J. Low, Jia Shi, and Wenxiang He
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Physics ,010405 organic chemistry ,Conductance ,Charge (physics) ,General Chemistry ,Gating ,02 engineering and technology ,General Medicine ,Ring (chemistry) ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Chemical physics ,Phenylene ,Quantum interference ,Molecule ,0210 nano-technology ,Quantum tunnelling - Abstract
Together with the more intuitive and commonly recognized conductance mechanisms of charge‐hopping and tunneling, quantum interference (QI) phenomena have been identified as important factors affecting charge transport through molecules. Consequently, establishing simple, flexible molecular design strategies to understand, control and exploit QI in molecular junctions poses an exciting challenge. Here we demonstrate that destructive quantum interference (DQI) in meta‐substituted phenylene ethylene‐type oligomers (m‐OPE) can be tuned by changing the position and conformation of pendant methoxy (OMe) substituents around the central phenylene ring. These substituents play the role of molecular‐scale ‘taps’, which can be switched on or off to control the current flow through a molecule. Our experimental results conclusively verify recently postulated magic ratio and orbital product rules, and highlight a novel chemical design strategy for tuning and gating DQI features, to create single‐molecule devices with desirable electronic functions.
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- 2019
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21. Effects of Electrode–Molecule Binding and Junction Geometry on the Single-Molecule Conductance of bis-2,2′:6′,2″-Terpyridine-based Complexes
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Paul J. Low, Oday A. Al-Owaedi, Ross J. Davidson, Qiang Zeng, Simon J. Higgins, František Hartl, David C. Milan, Richard J. Nichols, Colin J. Lambert, and Joanne Tory
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Stereochemistry ,Metal ions in aqueous solution ,Conductance ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Electrochemistry ,01 natural sciences ,Redox ,0104 chemical sciences ,Inorganic Chemistry ,chemistry.chemical_compound ,Crystallography ,chemistry ,Electrode ,Molecule ,Physical and Theoretical Chemistry ,Terpyridine ,0210 nano-technology ,Linker - Abstract
The single molecule conductances of a series of bis-2,2':6',2″-terpyridine complexes featuring Ru(II), Fe(II), and Co(II) metal ions and trimethylsilylethynyl (Me3SiC≡C-) or thiomethyl (MeS-) surface contact groups have been determined. In the absence of electrochemical gating, these complexes behave as tunneling barriers, with conductance properties determined more by the strength of the electrode-molecule contact and the structure of the "linker" than the nature of the metal-ion or redox properties of the complex.
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- 2016
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22. Chemical and physical behaviour of heteroleptic 2,6-bis(1 H -benzimidazol-2-yl)pyridine and 2,2′:6′,2″-terpyridine substituted tricyclophosphazene ruthenium(II) complexes
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Andrew M. Brodie, Mark R. Waterland, Geoffrey B. Jameson, Eric W. Ainscough, and Ross J. Davidson
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Benzimidazole ,010405 organic chemistry ,Ligand ,Stereochemistry ,Resonance Raman spectroscopy ,chemistry.chemical_element ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,Ruthenium ,Inorganic Chemistry ,chemistry.chemical_compound ,chemistry ,Polymer chemistry ,Pyridine ,Materials Chemistry ,Physical and Theoretical Chemistry ,Terpyridine ,Spectroscopy ,Phosphazene - Abstract
Six complexes consisting of either 2,6-bis(1H-benzimidazol-2-yl)pyridine (bbp) or 2,2′:6′,2″-terpyridine (tpy) moieties coordinated to ruthenium(II) and attached to (pentaphenoxy)cyclotriphosphazene were synthesised and structurally characterised by single-crystal X-ray diffraction techniques. Two of the complexes are the first examples of structurally characterised mono-protonated Ru(bbp)(tpy) complexes. The new complexes were studied by NMR, electronic absorption and vibration spectroscopy to gain an understanding of their physical characteristics. Remarkably the mono-deprotonated form of the bbp ligand, but only when attached to (pentaphenoxy)cyclotriphosphazene by a pyridyl phosphoester linker, shows an equivalence of the benzimidazole/benzimidazolate moieties on the NMR time scale, but not on the electronic time scale, as evidenced by UV–Vis and resonance Raman spectroscopy.
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- 2016
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23. Highly Linearized Twisted Iridium(III) Complexes
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Chenfei Li, Robert Pal, Dmitry S. Yufit, Yu-Ting Hsu, Gareth C Griffiths, Andrew Beeby, and Ross J. Davidson
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chemistry.chemical_classification ,Acetylacetone ,Synthon ,Substituent ,chemistry.chemical_element ,Alkyne ,Sonogashira coupling ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Inorganic Chemistry ,chemistry.chemical_compound ,Crystallography ,chemistry ,Molecule ,Iridium ,Physical and Theoretical Chemistry ,0210 nano-technology ,Polarization (electrochemistry) - Abstract
Improving the spatial alignment of emitting molecules has long been a goal of organic-light-emitting-diode development to improve device efficiencies and to generate polarized emission. Herein we describe a simple approach employing Sonogashira coupling with alkyne iridium(phenylpyridine)2(acetylacetone) synthons (2-5) to generate eight linear iridium complexes (6-13) with crystallographically determined lengths of up to 5 nm. By embedding these "long" complexes into a polymer matrix and stretching it, an improvement of the polarization ratio of unstretched and stretched films of up to 7.1 times was achieved. Additionally, through the inclusion of "twists" in the complexes, the electronic coupling between the iridium center and substituent was controlled, giving a system where the emission behavior is independent of the length.
- Published
- 2018
24. Conductance of 'bare-bones' tripodal molecular wires
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Ross J Davidson, David C Milan, Oday A Al-Owaedi, Ali K Ismael, Richard J Nichols, Simon J Higgins, Colin J Lambert, Dmitry S Yufit, Andrew Beeby
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Controlling the orientation of molecular conductors on the electrode surfaces is a critical factor in the development of single-molecule conductors. In the current study, we used the scanning tunnelling microscopy-based break junction (STM-BJ) technique to explore ‘bare-bones’ tripodal molecular wires, employing different anchor groups (AGs) at the ‘top’ and ‘bottom’ of the tripod. The triarylphosphine tris(4-(methylthio)phenyl)phosphine and its corresponding phosphine sulfide showed only a single high conductance feature in the resulting 1- and 2-dimensional conductance histograms, whereas analogous molecules with fewer than three thiomethyl AGs did not show clear conductance features. Thus, by systematic molecular modifications and with the aid of supporting DFT calculations, the binding geometry, with respect to the surface, was elucidated.
- Published
- 2018
25. Conductance of 'bare-bones' tripodal molecular wires
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Ross J, Davidson, David C, Milan, Oday A, Al-Owaedi, Ali K, Ismael, Richard J, Nichols, Simon J, Higgins, Colin J, Lambert, Dmitry S, Yufit, and Andrew, Beeby
- Abstract
Controlling the orientation of molecular conductors on the electrode surfaces is a critical factor in the development of single-molecule conductors. In the current study, we used the scanning tunnelling microscopy-based break junction (STM-BJ) technique to explore 'bare-bones' tripodal molecular wires, employing different anchor groups (AGs) at the 'top' and 'bottom' of the tripod. The triarylphosphine tris(4-(methylthio)phenyl)phosphine and its corresponding phosphine sulfide showed only a single high conductance feature in the resulting 1- and 2-dimensional conductance histograms, whereas analogous molecules with fewer than three thiomethyl AGs did not show clear conductance features. Thus, by systematic molecular modifications and with the aid of supporting DFT calculations, the binding geometry, with respect to the surface, was elucidated.
- Published
- 2018
26. Synthesis, Electrochemistry, and Single-Molecule Conductance of Bimetallic 2,3,5,6-Tetra(pyridine-2-yl)pyrazine-Based Complexes
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Simon J. Higgins, Bing-Wei Mao, Andrew Beeby, Dmitry S. Yufit, David C. Milan, Jing-Hong Liang, Richard J. Nichols, Paul J. Low, and Ross J. Davidson
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Pyrazine ,010405 organic chemistry ,Stereochemistry ,Conductance ,Bridging ligand ,010402 general chemistry ,Electrochemistry ,01 natural sciences ,0104 chemical sciences ,Inorganic Chemistry ,Crystallography ,chemistry.chemical_compound ,chemistry ,Pyridine ,Molecule ,Molecular orbital ,Physical and Theoretical Chemistry ,Bimetallic strip - Abstract
The ligands 4'-(4-(methylthio)phenyl)-2,2':6',2″-terpyridine (L(1)), 4'-((4-(methylthio)phenyl)ethynyl)- 2,2':6',2″-terpyridine (L(2)), and bis(tridentate) bridging ligand 2,3,5,6-tetra(pyridine-2-yl)pyrazine (tpp) were used to prepare the complexes [Ru(L(1))2][PF6]2 ([1][PF6]2, [Ru(L(2))2][PF6]2 ([2][PF6]2), [{(L(1))Ru}(μ-tpp){Ru(L(1))}][PF6]4 ([3][PF6]4), and [{(L(2))Ru}(μ-tpp){Ru(L(2))}][PF6]4 ([4][PF6]4). Crystallographically determined structures give S···S distances of up to 32.0 Å in [4](4+). On the basis of electrochemical estimates, the highest occupied molecular orbitals of these complexes fall between -5.55 and -5.85 eV, close to the work function of clean gold (5.1-5.3 eV). The decay of conductance with molecular length across this series of molecules is approximately exponential, giving rise to a decay constant (pseudo β-value) of 1.5 nm(-1), falling between decay factors for oligoynes and oligophenylenes. The results are consistent with a tunnelling mechanism for the single-molecule conductance behavior.
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- 2015
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27. Terpyridine and 2,6-di(1H-pyrazol-1-yl)pyridine substituted cyclotri- and polyphosphazene ruthenium(II) complexes: Chemical and physical behaviour
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Harry R. Allcock, Mark R. Waterland, Ross J. Davidson, Geoffrey B. Jameson, Eric W. Ainscough, Andrew M. Brodie, and Mark D. Hindenlang
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Resonance Raman spectroscopy ,chemistry.chemical_element ,Small molecule ,Ruthenium ,Inorganic Chemistry ,chemistry.chemical_compound ,Octahedron ,chemistry ,Pyridine ,Polymer chemistry ,Materials Chemistry ,Organic chemistry ,Polyphosphazene ,Physical and Theoretical Chemistry ,Terpyridine ,Phosphazene - Abstract
The synthesis of a series of cyclotriphosphazene and polyphosphazene ruthenium(II) compounds is reported using 2,2′:6′,2″-terpyridine (terpy) and 2,6-di(1H-pyrazol-1-yl)pyridine (bpp) pendant ligands. X-ray crystallography, UV–Vis and resonance Raman spectroscopy have been employed to gain an insight into the physical and coordination behaviour of these complexes and indicate that both the small molecule and their polymeric analogues contain coordinated Ru in an octahedral ‘N6’ environment. The results reveal a difference between the chemistry of the ruthenium(II)-bpp-terpy and ruthenium(II)-bis-terpy complexes and demonstrate a means of grafting functional groups to a polyphosphazene backbone under mild conditions.
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- 2015
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28. Iron Restriction to Clinical Isolates of Candida albicans by the Novel Chelator DIBI Inhibits Growth and Increases Sensitivity to Azoles
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David S. Allan, Maria del Carmen Parquet, Paul L. Fidel, Ross J. Davidson, Kimberley A. Savage, Elizabeth A. Lilly, and Bruce E. Holbein
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0301 basic medicine ,Azoles ,Antifungal Agents ,030106 microbiology ,Deferoxamine ,Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,Mice ,In vivo ,Drug Resistance, Fungal ,Candida albicans ,medicine ,Animals ,Pharmacology (medical) ,Experimental Therapeutics ,Deferiprone ,Vaginitis ,Candida ,Pharmacology ,chemistry.chemical_classification ,biology ,Drug Synergism ,biology.organism_classification ,Corpus albicans ,Disease Models, Animal ,030104 developmental biology ,Infectious Diseases ,chemistry ,Azole ,Female ,Growth inhibition ,Erratum ,Fluconazole ,medicine.drug - Abstract
Candida albicansis an important opportunistic pathogen causing various human infections that are often treated with azole antifungals. The U.S. CDC now regards developing candidal antifungal resistance as a threat, creating a need for new and more effective antifungal treatments. Iron is an essential nutrient for all living cells, and there is growing evidence that interference with iron homeostasis ofC. albicanscan improve its response to antifungals. This study was aimed at establishing whether withholding iron by currently used medical iron chelators and the novel chelator DIBI could restrict growth and also enhance the activity of azoles against clinical isolates ofC. albicans. DIBI, but not deferoxamine or deferiprone, inhibited the growth ofC. albicansat relatively low concentrationsin vitro, and this inhibition was reversed by iron addition. DIBI in combination with various azoles demonstrated stronger growth inhibition than the azoles alone and greatly prolonged the inhibition of cell multiplication. In addition, the administration of DIBI along with fluconazole (FLC) to mice inoculated with an FLC-sensitive isolate in a model of experimentalC. albicansvaginitis showed a markedly improved clearance of infection. These results suggest that iron chelation by DIBI has the potential to enhance azole efficacy for the treatment of candidiasis.
- Published
- 2017
29. Enterobacter cloacae Complex Isolates Harboring bla NMC-A or bla IMI -Type Class A Carbapenemase Genes on Novel Chromosomal Integrative Elements and Plasmids
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Michael R. Mulvey, Laura F. Mataseje, Johannes A. Delport, Ross J. Davidson, Diane Roscoe, Jeffrey D. Fuller, Brigitte Lefebvre, L Hoang, Barbara M. Willey, David A. Boyd, and Paul N. Levett
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0301 basic medicine ,Pharmacology ,Carbapenem ,030106 microbiology ,Chromosome ,Locus (genetics) ,Tigecycline ,Biology ,Microbiology ,03 medical and health sciences ,Infectious Diseases ,Plasmid ,medicine ,Multilocus sequence typing ,Pharmacology (medical) ,Mobile genetic elements ,Gene ,medicine.drug - Abstract
Carbapenem-resistant Enterobacter cloacae complex isolates submitted to a reference laboratory from 2010 to 2015 were screened by PCR for seven common carbapenemase gene groups, namely, KPC, NDM, OXA-48, VIM, IMP, GES, and NMC-A/IMI. Nineteen of the submitted isolates (1.7%) were found to harbor Ambler class A bla NMC-A or bla IMI -type carbapenemases. All 19 isolates were resistant to at least one carbapenem but susceptible to aminoglycosides, trimethoprim-sulfamethoxazole, tigecycline, and ciprofloxacin. Most isolates (17/19) gave positive results with the Carba-NP test for phenotypic carbapenemase detection. Isolates were genetically diverse by pulsed-field gel electrophoresis macrorestriction analysis, multilocus sequence typing, and hsp60 gene analysis. The genes were found in various Enterobacter cloacae complex species; however, bla NMC-A was highly associated with Enterobacter ludwigii . Whole-genome sequencing and bioinformatics analysis revealed that all NMC-A ( n = 10), IMI-1 ( n = 5), and IMI-9 ( n = 2) producers harbored the carbapenemase gene on EludIMEX-1-like integrative mobile elements (EcloIMEXs) located in the identical chromosomal locus. Two novel genes, bla IMI-5 and bla IMI-6 , were harbored on different IncFII-type plasmids. Enterobacter cloacae complex isolates harboring bla NMC-A/IMI -type carbapenemases are relatively rare in Canada. Though mostly found integrated into the chromosome, some variants are located on plasmids that may enhance their mobility potential.
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- 2017
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30. Structural studies on tris(2-cyanoethyl)phosphine complexes of Cu(I): The sensitivity of the secondary nitrile coordination to the nature of the anion
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Andrew M. Brodie, Graham H. Freeman, Ross J. Davidson, Geoffrey B. Jameson, and Eric W. Ainscough
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Coordination sphere ,Denticity ,Nitrile ,Chemistry ,Stereochemistry ,Ligand ,Medicinal chemistry ,Inorganic Chemistry ,chemistry.chemical_compound ,Monomer ,Materials Chemistry ,TCEP ,Chelation ,Physical and Theoretical Chemistry ,Phosphine - Abstract
Tris(2-cyanoethyl)phosphine (tcep) reacts with the copper(I) compounds, CuX (X = Cl, Br, I and SCN), in a 1:1 ratio to give 1:1 complexes, CuX(tcep), whereas it reacts with CuY (Y = PF 6 , ClO 4 , NO 3 , BH 4 , CN and CF 3 COO) in a 2:1 ratio to give the 2:1 complexes, CuY(tcep) 2 . Single crystal X-ray structures show that for the anions X = Br and SCN, the complexes are coordination polymers, [CuX(tcep)] n , with the Cu centres being bridged by the anion, and as well, one nitrile arm per tcep ligand coordinates intermolecularly to the Cu to give tetrahedral ‘PBr 2 N’ and ‘PSN 2 ’ coordination spheres respectively. The 2:1 compounds exhibit a variety of structures. For Y = ClO 4 , CN and CF 3 COO polymeric structures are formed except for Y = BH 4 where the compound is a discrete monomer, [Cu(BH 4 )(tcep) 2 ], with a chelating anion and two monodentate P-bound tcep ligands. Both the compounds obtained with Y = CN and CF 3 COO also contain coordinated anions and are formulated as [Cu(CN)(tcep) 2 ] n and [Cu(CF 3 COO)(tcep) 2 ] n respectively. In the case of Y = CN the anion is bridging and the tcep ligands are only P-bound giving a ‘P 2 NC’ coordination sphere. In contrast, for Y = CF 3 COO, the anion is an O-bound monodentate and the tcep ligands bridge to give a ‘P 2 NO’ environment for the copper. In the case of Y = ClO 4 , the anion is not coordinated but a polymeric structure, [Cu(tcep) 2 ] n (ClO 4 ) n , is formed via bridging tcep ligands linking Cu centres intermolecularly resulting in a ‘P 2 N 2 ’ coordination sphere.
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- 2014
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31. Avoiding cross-linking in iron-polyphosphazene metallo-polymers
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Guy N. L. Jameson, Ross J. Davidson, Eric W. Ainscough, Mark R. Waterland, Andrew M. Brodie, Harry R. Allcock, and Mark D. Hindenlang
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chemistry.chemical_classification ,Denticity ,Geminal ,Chemistry ,Inorganic chemistry ,Polymer ,Inorganic Chemistry ,Absorbance ,chemistry.chemical_compound ,Mössbauer spectroscopy ,X-ray crystallography ,Pyridine ,Polymer chemistry ,Materials Chemistry ,Polyphosphazene ,Physical and Theoretical Chemistry - Abstract
Two new polyphosphazene ligands containing 1,10-phenanthrolin-2-olate (L1) and 2,2ʹ-bipyridine-6-olate moieties (L2) with 5,5ʹ-di-tert-butylbiphenyl-2,2ʹ-bis(olate) co-substituents were synthesised and then reacted with Fe(Pyridine)4(NCS)2. Variable temperature Mossbauer and electronic absorbance spectroscopies were used to establish the physical behaviour of the new iron-polyphosphazenes. By attaching two bidentate ligands to a geminal phosphorus atom a pseudo tetradentate ligand can be formed that prevents cross-linking when iron is coordinated to the polyphosphazene.
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- 2015
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32. A behavioural difference between an iron(II) grafted polyphosphazene and its small molecule cyclophosphazene analogue
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Ross J. Davidson, Guy N. L. Jameson, Harry R. Allcock, Boujemaa Moubaraki, Mark D. Hindenlang, Mark R. Waterland, Keith C. Gordon, Andrew M. Brodie, Raphael Horvath, Eric W. Ainscough, and Keith S. Murray
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Inorganic Chemistry ,Magnetic moment ,Absorption spectroscopy ,Chemistry ,Spin crossover ,Mössbauer spectroscopy ,Polymer chemistry ,Materials Chemistry ,Polyphosphazene ,Physical and Theoretical Chemistry ,Small molecule ,Pyridine moiety - Abstract
Mossbauer and electronic absorbance spectroscopy along with variable temperature magnetic moment measurements demonstrate that a cyclotriphosphazene substituted with an iron(II)-bis-2,6-di(1H-pyrazoly-yl)pyridine moiety ( 1 ) and its polyphosphazene analogue ( 2 ) differ significantly in magnetic behaviour.
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- 2013
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33. An iron(II) spin crossover grafted cyclotriphosphazene
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Boujemaa Moubaraki, Geoffrey B. Jameson, Keith S. Murray, Eric W. Ainscough, Guy N. L. Jameson, Mark R. Waterland, Raphael Horvath, Ross J. Davidson, Keith C. Gordon, and Andrew M. Brodie
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Coordination sphere ,Stereochemistry ,Ligand ,Inorganic Chemistry ,chemistry.chemical_compound ,Crystallography ,chemistry ,Spin crossover ,Pyridine ,Materials Chemistry ,Moiety ,Density functional theory ,Physical and Theoretical Chemistry ,Single crystal ,Phosphazene - Abstract
The synthesis of the new cyclotriphosphazene (CTP) ligand substituted with a pendant 2,6-bis(benzimidazole-2-yl)pyridine (bbp), namely (pentaphenoxy)[4-{2,6-bis(benzimidazole-2-yl)pyridine-4-yl}phenoxy]cyclotriphosphazene L is reported. The single crystal structure of L shows that the bbp group is attached to the CTP via the oxygen. L reacts with FeX2 (X = ClO4− or BF4-) salts forming the [FeL2]X2 complexes 1 and 2 respectively. For [FeL2](BF4)2 (2), the single crystal structure shows an ‘N6’ coordination sphere around the iron atom. UV–Vis, resonance Raman and Mossbauer spectroscopies and magnetic susceptibility measurements, aided by density functional theory (DFT) calculations, determine the complexes are low spin below 300 K but display spin crossover (SCO) behavior above this temperature, hence showing that the addition of a phosphazene to a SCO moiety does not prevent SCO.
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- 2013
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34. Single-Molecule Conductance of Viologen-Cucurbit[8]uril Host-Guest Complexes
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Wei, Zhang, Shiyu, Gan, Andrea, Vezzoli, Ross J, Davidson, David C, Milan, Konstantin V, Luzyanin, Simon J, Higgins, Richard J, Nichols, Andrew, Beeby, Paul J, Low, Buyi, Li, and Li, Niu
- Abstract
The local molecular environment is a critical factor which should be taken into account when measuring single-molecule electrical properties in condensed media or in the design of future molecular electronic or single molecule sensing devices. Supramolecular interactions can be used to control the local environment in molecular assemblies and have been used to create microenvironments, for instance, for chemical reactions. Here, we use supramolecular interactions to create microenvironments which influence the electrical conductance of single molecule wires. Cucurbit[8]uril (CB[8]) with a large hydrophobic cavity was used to host the viologen (bipyridinium) molecular wires forming a 1:1 supramolecular complex. Significant increases in the viologen wire single molecule conductances are observed when it is threaded into CB[8] due to large changes of the molecular microenvironment. The results were interpreted within the framework of a Marcus-type model for electron transfer as arising from a reduction in outer-sphere reorganization energy when the viologen is confined within the hydrophobic CB[8] cavity.
- Published
- 2016
35. Toward an Iron(II) Spin-Crossover Grafted Phosphazene Polymer
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Raphael Horvath, Andrew M. Brodie, Geoffrey B. Jameson, Mark D. Hindenlang, Eric W. Ainscough, Guy N. L. Jameson, Harry R. Allcock, Mark R. Waterland, Ross J. Davidson, Boujemaa Moubaraki, Keith S. Murray, and Keith C. Gordon
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Chemistry ,Ligand ,Inorganic chemistry ,Resonance (chemistry) ,Inorganic Chemistry ,symbols.namesake ,chemistry.chemical_compound ,Crystallography ,Spin crossover ,Mössbauer spectroscopy ,symbols ,Density functional theory ,Physical and Theoretical Chemistry ,Terpyridine ,Raman spectroscopy ,Phosphazene - Abstract
Two new cyclotriphosphazene ligands with pendant 2,2':6',2″-terpyridine (Terpy) moieties, namely, (pentaphenoxy){4-[2,6-bis(2-pyridyl)]pyridoxy}cyclotriphosphazene (L(1)), (pentaphenoxy){4-[2,6-terpyridin-4-yl]phenoxy}cyclotriphosphazene (L(2)), and their respective polymeric analogues, L(1P) and L(2P), were synthesized. These ligands were used to form iron(II) complexes with an Fe(II)Terpy(2) core. Variable-temperature resonance Raman, UV-visible, and Mössbauer spectroscopies with magnetic measurements aided by density functional theory calculations were used to understand the physical characteristics of the complexes. By a comparison of measurements, the polymers were shown to behave in the same way as the cyclotriphosphazene analogues. The results showed that spin crossover (SCO) can be induced to start at high temperatures by extending the spacer length of the ligand to that in L(2) and L(2P); this combination provides a route to forming a malleable SCO material.
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- 2012
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36. The Nature of the Phosphazene Nitrogen–Metal Bond: DFT Calculations on 2‐(Pyridyloxy)cyclophosphazene Complexes
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Eric W. Ainscough, Ross J. Davidson, Mark R. Waterland, Andrew M. Brodie, and John A. Harrison
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Metal ions in aqueous solution ,Bond order ,Inorganic Chemistry ,Metal ,Crystallography ,chemistry.chemical_compound ,Transition metal ,chemistry ,Computational chemistry ,visual_art ,visual_art.visual_art_medium ,Density functional theory ,Phosphazene ,Natural bond orbital ,Metallic bonding - Abstract
The metal-nitrogen bond in six-coordinate complexes [ML 1 C1] + (M = Co, Ni, Cu or Zn) of (pyridyloxy)cyclophosphazene, five-coordinate complexes [ML 1 Cl 2 ] (M = Cu or Zn) of green-[NiL 1 Cl 2 ], and dimetallic complexes [L 2 (CuCl 2 ) 2 ], [L 3 (CuCl 2 ] 2+ and [L 3 (CuCl 2 ) 2 ] [L 1 = hexakis(2-pyridyloxy)-cyclotriphosphazene, L 2 = hexakis(4-methyl-2-pyridyloxy)-cyclotriphosphazene or L 3 = octakis(4-methyl-2-pyridyloxy)-cyclotetraphosphazene] of red-[NiL 1 Cl 2 ], has been investigated by using density functional theory (DFT) and natural bond order (NBO) analysis. The calculations show that the divalent metal ions bind to the phosphazene ring nitrogen by a σ-type bond and that the lengthening of the PN bonds, which flank the metal coordination site, can be explained as a result of electron density that is transferred from PN bonding orbitals to the 4s orbital of the metal ion rather than a decrease in the π component of the bond as suggested by earlier models. It can be assumed that this explanation of the bonding is valid for the wide range of metallo-phosphazene complexes and that metal ions will bind to the PN backbone of polyphosphazenes in a similar manner.
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- 2010
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37. Laboratory Diagnosis of Mumps in a Partially Immunized Population: The Nova Scotia Experience
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Marek Smieja, John C. LeBlanc, Kevin R Forward, Ross J. Davidson, S Clay, Janice Pettipas, Todd F. Hatchette, and S Sarwal
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Microbiology (medical) ,Population ,Infectious and parasitic diseases ,RC109-216 ,Microbiology ,Measles ,Serology ,Rubella vaccine ,stomatognathic system ,Medicine ,education ,education.field_of_study ,biology ,business.industry ,Outbreak ,medicine.disease ,Virology ,QR1-502 ,Vaccination ,Infectious Diseases ,Immunization ,Immunoglobulin M ,Immunology ,biology.protein ,Original Article ,business ,medicine.drug - Abstract
BACKGROUND: In 2007, Atlantic Canada experienced a large outbreak of mumps predominately in university students who had received a single dose of measles, mumps and rubella vaccine. The present study describes the performance characteristics of reverse transcriptase polymerase chain reaction (RT-PCR) on buccal and urine specimens and immunoglobulin M (IgM) serology in this partially immune population.METHODS: Patients presenting with symptoms suspicious for mumps had a serum, urine and a buccal swab collected for diagnostic testing. Persons were classified as a ‘confirmed’ case according to the Public Health Agency of Canada’s definition. Sera were tested using an enzyme-linked immunoassay. Detection of mumps virus in buccal swabs and urine samples was performed by RT-PCR.RESULTS: A subset of 155 cases and 376 non-cases that had all three specimens submitted was used for calculating the performance characteristics. The sensitivity of RT-PCR on buccal swabs, urine specimens and IgM serology were 79%, 43% and 25%, respectively. The specificity of RT-PCR on buccal swabs, urine specimens and IgM serology was 99.5%, 100% and 99.7%, respectively. Only 12 of 134 (9%) patients had positive urine specimens in the presence of negative oral swabs.CONCLUSION: RT-PCR on buccal swabs is the ideal specimen for diagnosis. Testing an additional urine sample in an outbreak setting did not increase the diagnostic yield significantly, but doubled testing volume and cost. In addition, the data suggest that, in this partially immune group, IgM serology has little value in the diagnosis of acute infection.
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- 2009
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38. Metal−Metal Communication in Copper(II) Complexes of Cyclotetraphosphazene Ligands
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Carl A. Otter, Boujemaa Moubaraki, Andrew M. Brodie, Ross J. Davidson, Mark R. Waterland, Eric W. Ainscough, and Keith S. Murray
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Inorganic Chemistry ,chemistry.chemical_compound ,chemistry ,Bromide ,Inorganic chemistry ,Polymer chemistry ,medicine ,chemistry.chemical_element ,Metal metal ,Physical and Theoretical Chemistry ,Chloride ,Copper ,medicine.drug - Abstract
Copper(II) chloride and bromide react with the pyridyloxy-substituted cyclotetraphosphazene ligands, octakis(2-pyridyloxy)cyclotetraphosphazene (L(1)), and octakis(4-methyl-2-pyridyloxy)cyclotetraphosphazene (L(2)), to form the dimetallic complexes, [L(CuX2)2] (L = L(1), X = Br; L = L(2), X = Cl or Br), and [{L(1)(CuCl2)2}n]. Single crystal X-ray crystallography shows the complex [{L(1)(CuCl2)2}n] to be a coordination polymer propagated by interligand "Cu(mu-Cl)2Cu" bridges whereas [L(2)(CuCl2)2] forms discrete dimetallic cyclotetraphosphazene-based moieties. The variable temperature magnetic susceptibility data for [{L(1)(CuCl2)2}n] are consistent with a weak antiferromagnetic exchange interaction between the copper(II) centers occurring via the bridging chloride ions. [L(2)(CuCl2)2] and [L(CuBr2)2] (L = L(1) and L(2)) exhibit normal Curie-like susceptibilities. The abstraction of a chloride ion, using [Ag(MeCN)4](PF6), from each copper site in [L(2)(CuCl2)2], affords the new complex, [L(2)(CuCl)2](PF6)2, in which the two copper(II) ions are separated by "N-P=N-P=N" phosphazene bridges. Electron spin resonance and variable temperature magnetic measurements indicate the occurrence of weak antiferromagnetic coupling between the unpaired electrons on the copper(II) centers. Density Functional Theory (DFT) calculations on the [L(2)(CuCl)2](2+) dication and the related cyclotriphosphazene complex, [L(4)(CuCl2)2] (L(4) = hexakis(4-methyl-2-pyridyloxy)cyclotriphosphazene), have identified "electron-density-bridge" molecular orbitals which involve Cu 3d orbitals overlapping with the non-bonding N-based molecular orbitals on the phosphazene rings as the pathway for this interaction.
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- 2008
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39. Herpes Simplex Virus Type 2 Displays Atypical Melting-Temperature Profiles at Low Viral Titers
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Todd F. Hatchette, Sarah J. Campbell, Jason J. LeBlanc, Janice Pettipas, and Ross J. Davidson
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Male ,Microbiology (medical) ,viruses ,Herpesvirus 2, Human ,HSL and HSV ,Biology ,medicine.disease_cause ,Virus ,Herpesviridae ,Vulva ,chemistry.chemical_compound ,Tongue ,Virology ,Alphaherpesvirinae ,medicine ,Humans ,Transition Temperature ,Typing ,Cerebrospinal Fluid ,biology.organism_classification ,Lip ,Titer ,Herpes simplex virus ,chemistry ,DNA, Viral ,Female ,DNA ,Penis - Abstract
Real-time PCR is a powerful tool for the detection and typing of herpes simplex virus (HSV). HSV types 1 and 2 can be distinguished by using the differences in the melting temperatures ( T m s) of the hybridization probes. The efficacy of T m profiling with low DNA concentrations was evaluated in this study.
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- 2008
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40. The first coordination polymer containing a chiral cyclotriphosphazene ligand
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Carl A. Otter, Ross J. Davidson, Eric W. Ainscough, and Andrew M. Brodie
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Inorganic Chemistry ,chemistry.chemical_compound ,Crystallography ,Materials science ,chemistry ,Ligand ,Coordination polymer ,Chiral ligand ,Materials Chemistry ,Crystal structure ,Physical and Theoretical Chemistry ,Single crystal ,Topology (chemistry) - Abstract
The preparation and the single crystal X-ray structure of a new chiral ligand, 3,3,5,5-tetrapyridyloxy-1,1-{(R)-1,1′-dioxy-2,2′-binapthyl}cyclotriphosphazene (LR), is described. LR reacts with [Ag(MeCN)4]PF6 to produce the complex {[AgLR](PF6) · Et2O · 2MeCN}n, which was also characterised by X-ray crystallography. The topology of complex is a 1D coordination polymer that, in the crystalline structure, consists of two different infinite chains arranged in layers that are approximately orthogonal to each another.
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- 2008
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41. The first structurally characterised cyclotriphosphazene substituted with a sulfonamide nitrogen
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Carl A. Otter, Ross J. Davidson, Eric W. Ainscough, and Andrew M. Brodie
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chemistry.chemical_classification ,Geminal ,Stereochemistry ,chemistry.chemical_element ,Nitrogen ,Medicinal chemistry ,2,2'-Bipyridine ,Sulfonamide ,Inorganic Chemistry ,chemistry.chemical_compound ,chemistry ,Materials Chemistry ,Moiety ,Physical and Theoretical Chemistry ,Single crystal ,Phosphazene ,Palladium - Abstract
The reaction between two equivalents of N -(2-hydroxyphenyl)- p -toluenesulfonamide (H 2 sulf) and [N 3 P 3 (biph) 2 Cl 2 ] (H 2 biph = 2,2′-biphenol) produces the compound bis (2,2′-biphenylato) bis (2-oxyphenyl)- p -toluenesulfonamide cyclotriphosphazene (H 2 L) containing two geminal Hsulf moieties. Further reaction of H 2 L in basic conditions results in the removal of the sulfonamide arm and the slow formation of a novel phosphazene containing the spirocyclic sulf moiety. When this occurs in the presence of [Pd(bpy)Cl 2 ] the reaction is facile and the new complex [Pd(bpy)(sulf)] ( 2 ) is also formed. Compounds H 2 L, 1 and 2 have all been characterised by single crystal X-ray crystallography.
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- 2007
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42. Alkyne substituted mononuclear photocatalysts based on [RuCl(bpy)(tpy)]⁺
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Paul J. Low, Andrew Beeby, Lucy E. Wilson, Dimitrii S. Yufit, Ross J. Davidson, and Andrew R. Duckworth
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chemistry.chemical_classification ,Ligand ,Alkyne ,Alcohol ,Resonance (chemistry) ,Photochemistry ,Redox ,Medicinal chemistry ,Inorganic Chemistry ,Benzaldehyde ,chemistry.chemical_compound ,symbols.namesake ,chemistry ,symbols ,Cyclic voltammetry ,Raman spectroscopy - Abstract
The ethynyl-phenylene substituted 2,2':6',2''-terpyridine (tpy) derivatives, 4-(phenyl-ethynyl)-2,2':6',2''-terpyridine (L(1)), 4-(methoxyphenyl-ethynyl)-2,2':6',2''-terpyridine (L(2)), 4-(tolyl-ethynyl)-2,2':6',2''-terpyridine (L(3)) and 4-(nitrophenyl-ethynyl)-2,2':6',2''-terpyridine (L(4)) have been used to synthesize four new [RuCl(2,2'-bipyridine)(L(n))]PF6 based complexes. Electronic absorption, resonance Raman, cyclic voltammetry and spectroelectrochemistry aided by DFT calculations were used to explore the influence of the alkynyl substituents on the electronic structures, photochemical and redox properties of the complexes. Furthermore, it is shown that the addition of ethynyl phenyl moieties to the 4-position of the tpy ligand does not have a detrimental effect on these complexes, or the analogous aqua complexes, with respect to their ability to photocatalyse the oxidation of 4-methoxybenzyl alcohol to the corresponding benzaldehyde.
- Published
- 2015
43. Cephalosporin resistance in Klebsiella pneumoniae from Nova Scotia, Canada
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Ross J. Davidson, Kevin R. Forward, Roberto G. Melano, and Heather Musgrave
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Microbiology (medical) ,Nova scotia ,medicine.drug_class ,Klebsiella pneumoniae ,Molecular Sequence Data ,Cephalosporin ,Microbial Sensitivity Tests ,Microbiology ,Bacterial Proteins ,polycyclic compounds ,medicine ,Humans ,Amino Acid Sequence ,Cefoxitin ,Phylogeny ,Cephalosporin Resistance ,biology ,Gene Expression Regulation, Bacterial ,General Medicine ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,biology.organism_classification ,Enterobacteriaceae ,Anti-Bacterial Agents ,Klebsiella Infections ,Nova Scotia ,Infectious Diseases ,Reduced susceptibility ,bacteria ,medicine.drug - Abstract
From 2116 Klebsiella pneumoniae strains isolated between January 2001 and December 2002 in Nova Scotia, Canada, 25 (1.18%) showed a reduced susceptibility to cefoxitin or extended-spectrum cephalosporins. Narrow-spectrum β-lactamase genes ( bla SHV-11 , bla SHV-1 , bla SHV-26 , bla SHV-32 , bla SHV-36 , and bla SHV-40 ) were the most prevalent. Four new variants were identified ( bla LEN-17 , bla OKP-B-13 , bla OKP-B-14 , and bla OKP-A-11 ), representing the 1st description of bla OKP in the Americas. Among the extended-spectrum β-lactamase (ESBL) genes, bla SHV-2 , bla SHV2a , bla SHV-12 , and bla CTX-M-15 were detected (ESBL prevalence of 0.14%). Nineteen strains were resistant to cefoxitin (MIC, 32 to >256 μg/mL). Nevertheless, an AmpC-like activity was detected in only 1 strain, which expressed CMY-2. The combined effects of narrow-spectrum β-lactamase production and decreased or nonexpression of OmpK35/36 porins did not account for the cefoxitin resistance observed in some of these strains.
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- 2006
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44. Compensatory Functions of Two Alkyl Hydroperoxide Reductases in the Oxidative Defense System of Legionella pneumophila
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Paul S. Hoffman, Jason J. LeBlanc, and Ross J. Davidson
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Mutant ,Reductase ,medicine.disease_cause ,Microbiology ,Legionella pneumophila ,chemistry.chemical_compound ,medicine ,Humans ,Molecular Biology ,Escherichia coli ,Molecular Biology of Pathogens ,chemistry.chemical_classification ,biology ,Escherichia coli Proteins ,Genetic Complementation Test ,Hydrogen Peroxide ,Peroxiredoxins ,U937 Cells ,Catalase ,biology.organism_classification ,Oxidative Stress ,Enzyme ,Peroxidases ,chemistry ,Biochemistry ,Cumene hydroperoxide ,biology.protein ,Peroxidase - Abstract
Legionella pneumophila expresses two catalase-peroxidase enzymes that exhibit strong peroxidatic but weak catalatic activities, suggesting that other enzymes participate in decomposition of hydrogen peroxide (H 2 O 2 ). Comparative genomics revealed that L. pneumophila and its close relative Coxiella burnetii each contain two peroxide-scavenging alkyl hydroperoxide reductase (AhpC) systems: AhpC1, which is similar to the Helicobacter pylori AhpC system, and AhpC2 AhpD (AhpC2D), which is similar to the AhpC AhpD system of Mycobacterium tuberculosis . To establish a catalatic function for these two systems, we expressed L. pneumophila ahpC1 or ahpC2 in a catalase/peroxidase mutant of Escherichia coli and demonstrated restoration of H 2 O 2 resistance by a disk diffusion assay. ahpC1 ::Km and ahpC2D ::Km chromosomal deletion mutants were two- to eightfold more sensitive to H 2 O 2 , tert -butyl hydroperoxide, cumene hydroperoxide, and paraquat than the wild-type L. pneumophila , a phenotype that could be restored by trans -complementation. Reciprocal strategies to construct double mutants were unsuccessful. Mutant strains were not enfeebled for growth in vitro or in a U937 cell infection model. Green fluorescence protein reporter assays revealed expression to be dependent on the stage of growth, with ahpC1 appearing after the exponential phase and ahpC2 appearing during early exponential phase. Quantitative real-time PCR showed that ahpC1 mRNA levels were ∼7- to 10-fold higher than ahpC2D mRNA levels. However, expression of ahpC2D was significantly increased in the ahpC1 mutant, whereas ahpC1 expression was unchanged in the ahpC2D mutant. These results indicate that AhpC1 or AhpC2D (or both) provide an essential hydrogen peroxide-scavenging function to L. pneumophila and that the compensatory activity of the ahpC2D system is most likely induced in response to oxidative stress.
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- 2006
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45. In Vitro Antimicrobial Susceptibilities of Streptococcus pneumoniae Clinical Isolates Obtained in Canada in 2002
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Tony Mazzulli, Ross J. Davidson, Allison McGeer, Deirdre L. Church, Karen Green, Otto G. Vanderkooi, Donald E. Low, Kevin R. Forward, Andrew E. Simor, Daryl J. Hoban, Karl Weiss, Jeff Powis, Magdalena Kuhn, and George G. Zhanel
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Adult ,Canada ,medicine.medical_specialty ,Adolescent ,medicine.drug_class ,Cephalosporin ,Telithromycin ,medicine.disease_cause ,Pneumococcal Infections ,Microbiology ,Community-acquired pneumonia ,Internal medicine ,Drug Resistance, Bacterial ,Streptococcus pneumoniae ,medicine ,Humans ,Pharmacology (medical) ,Child ,Aged ,Aged, 80 and over ,Pharmacology ,business.industry ,Age Factors ,Infant ,Middle Aged ,Amoxicillin ,medicine.disease ,Antimicrobial ,Anti-Bacterial Agents ,Penicillin ,Pneumococcal infections ,Infectious Diseases ,Susceptibility ,Child, Preschool ,Population Surveillance ,business ,medicine.drug - Abstract
Empirical treatment is best guided by current surveillance of local resistance patterns. The goal of this study is to characterize the prevalence of antimicrobial nonsusceptibility within pneumococcal isolates from Canada. The Canadian Bacterial Surveillance Network is comprised of laboratories from across Canada. Laboratories collected a defined number of consecutive clinical and all sterile site isolates of S. pneumoniae in 2002. In vitro susceptibility testing was performed by broth microdilution with NCCLS guidelines. Rates of nonsusceptibility were compared to previously published reports from the same network. A total of 2,539 isolates were tested. Penicillin nonsusceptibility increased to 15% (8.5% intermediate, 6.5% resistant) compared to 12.4% in 2000 ( P ≤ 0.025, χ 2 ). Only 32 (1.3%) isolates had an amoxicillin MIC of ≥4 μg/ml and only 2 of 32 cerebrospinal fluid isolates had an intermediate susceptibility to ceftriaxone by meningeal interpretive criteria (MIC = 1 μg/ml). A total of 354 (13.9%) isolates were macrolide nonsusceptible (46.3% MLS B , 56.7% M phenotype), increasing from 11.4% in 2000 ( P ≤ 0.0075, χ 2 ). Only 13 (1 μg/ml. Ciprofloxacin nonsusceptibility (defined as an MIC of ≥4 μg/ml) increased to 2.7% compared to 1.4% in 2000 ( P ≤ 0.0025, χ 2 ) and was primarily found in persons ≥18 years old (98.5%). Nonsusceptibility to penicillin, macrolides, and fluoroquinolones is increasing in Canada. Nonsusceptibility to amoxicillin and ceftriaxone remains uncommon. Newer antimicrobials such as telithromycin and respiratory fluoroquinolones have excellent in vitro activity.
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- 2004
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46. A Nosocomial Outbreak of Fluoroquinolone‐ResistantStreptococcus pneumoniae
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Michel Laverdière, Allison McGeer, Ross J. Davidson, C. Restieri, Richard Gauthier, Darrin J. Bast, Karl Weiss, Laurie Kilburn, Joyce C. S. de Azavedo, and Donald E. Low
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Male ,Microbiology (medical) ,Chronic bronchitis ,Genotype ,Gemifloxacin ,Microbial Sensitivity Tests ,medicine.disease_cause ,Pneumococcal Infections ,Disease Outbreaks ,Microbiology ,Anti-Infective Agents ,Levofloxacin ,Moxifloxacin ,Lower respiratory tract infection ,Streptococcus pneumoniae ,Humans ,Medicine ,Respiratory Tract Infections ,Aged ,Aged, 80 and over ,Cross Infection ,business.industry ,Drug Resistance, Microbial ,Middle Aged ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,medicine.disease ,Drug Resistance, Multiple ,Gatifloxacin ,Anti-Bacterial Agents ,Ciprofloxacin ,Phenotype ,Infectious Diseases ,Female ,business ,Fluoroquinolones ,medicine.drug - Abstract
Over the course of a 20-month period, in a hospital respiratory ward in which ciprofloxacin was often used as empirical antimicrobial therapy for lower respiratory tract infections (LRTIs), 16 patients with chronic bronchitis developed nosocomial LRTIs caused by penicillin- and ciprofloxacin-resistant Streptococcus pneumoniae (serotype 23 F). The minimum inhibitory concentration (MIC) of ciprofloxacin for all isolates from the first 9 patients was 4 microg/mL, in association with a parC mutation. Isolates from the subsequent 7 patients all had a ciprofloxacin MIC of 16 microg/mL, in association with an additional mutation in gyrA. The MICs for this isolate were 8 microg/mL of levofloxacin (resistant), 2 microg/mL of moxifloxacin and gatifloxacin (intermediately resistant), and 0.12 microg/mL of gemifloxacin. This outbreak demonstrates the ability of S. pneumoniae to acquire multiple mutations that result in increasing levels of resistance to the fluoroquinolones and to be transmitted from person to person.
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- 2001
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47. Comparison of the Velogene Rapid MRSA Identification Assay, Denka MRSA-Screen Assay, and BBL Crystal MRSA ID System for rapid identification of methicillin-resistant Staphylococcus aureus
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Ross J. Davidson, Judy C. Arbique, David Haldane, and Kevin R Forward
- Subjects
Microbiology (medical) ,Staphylococcus aureus ,Time Factors ,Micrococcaceae ,Meticillin ,Penicillins ,medicine.disease_cause ,Polymerase Chain Reaction ,Sensitivity and Specificity ,Microbiology ,law.invention ,Methicillin ,law ,medicine ,Humans ,Polymerase chain reaction ,Oxacillin ,biology ,business.industry ,SCCmec ,General Medicine ,Gold standard (test) ,Staphylococcal Infections ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,biology.organism_classification ,Methicillin-resistant Staphylococcus aureus ,Bacterial Typing Techniques ,Electrophoresis, Gel, Pulsed-Field ,Rapid identification ,Infectious Diseases ,Methicillin Resistance ,Reagent Kits, Diagnostic ,business ,medicine.drug - Abstract
Early detection of methicillin-resistant S.aureus (MRSA) is critical for both the management of infected patients, and the timely institution of appropriate infection control measures. Although detection of the mecA gene by PCR remains the gold standard, this technology is inaccessible for many laboratories. Therefore, we sought to evaluate several new rapid identification systems and compare them to PCR. A total of 71 methicillin-susceptible S. aureus (MSSA), 25 borderline oxacillin-resistant S. aureus (BORSA), and 213 MRSA were selected for study. S.aureus was identified using standard methods. Initial screening was performed on a Mueller-Hinton agar plate with 6 mg/L of oxacillin. MRSA strains were identified using PCR with primers specific for the mecA gene. PCR was used as the reference method. All isolates were tested using the BBL Crystal MRSA ID System (Becton Dickinson Microbiology Systems, Maryland, USA), the MRSA-Screen Assay (Denka Seiken Co., Ltd., Tokyo, Japan), and the Velogene Rapid MRSA Identification Assay (ID Biomedical Corp, Vancouver, BC). With minor modifications, all assays were performed according to manufacturers' instructions. Overall, the 3 commercial assays performed well. The sensitivity and specificity of the BBL, Denka, and Velogene systems were 99%/100%, 99%/100%, and 96%/100% respectively. The advantages of the phenotypic tests-BBL Crystal Kit and Denka MRSA-Screen Assay include lower cost per test, shelf-life, ease of use, and rapid turn-around times. Advantages of the Velogene Rapid MRSA include ability to perform genotypic high-volume testing without the equipment requirements and technical complexity involved with PCR. Turn-around times ranged from 15 min for the Denka MRSA-Screen Assay, 2 h for the Velogene Rapid MRSA, and 4 h for the BBL Crystal. The BBL Crystal, Denka MRSA-Screen, and Velogene Rapid MRSA identification systems are rapid, easy to perform, and provide accurate identification of MRSA. These rapid kits offer an acceptable alternative for smaller, non-reference, laboratories and reduce the dependency on PCR in larger laboratories for routine confirmation.
- Published
- 2001
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48. Fluoroquinolone Resistance in Clinical Isolates of Streptococcus pneumoniae : Contributions of Type II Topoisomerase Mutations and Efflux to Levels of Resistance
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Laurie Kilburn, Joyce C. S. de Azavedo, Donald E. Low, Darrin J. Bast, Ross J. Davidson, C.L. Duncan, and Lionel A. Mandell
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DNA Topoisomerase IV ,medicine.drug_class ,Biological Transport, Active ,Microbial Sensitivity Tests ,Drug resistance ,Biology ,DNA gyrase ,Microbiology ,Anti-Infective Agents ,Bacterial Proteins ,Ciprofloxacin ,Mechanisms of Resistance ,medicine ,Humans ,Pharmacology (medical) ,Norfloxacin ,Antibacterial agent ,Pharmacology ,chemistry.chemical_classification ,Drug Resistance, Microbial ,biochemical phenomena, metabolism, and nutrition ,Quinolone ,Amino acid ,DNA-Binding Proteins ,DNA Topoisomerases, Type II ,Phenotype ,Streptococcus pneumoniae ,Infectious Diseases ,Amino Acid Substitution ,chemistry ,DNA Gyrase ,Efflux ,Ofloxacin ,medicine.drug - Abstract
We report on amino acid substitutions in the quinolone resistance-determining region of type II topisomerases and the prevalence of reserpine-inhibited efflux for 70 clinical isolates of S. pneumoniae for which the ciprofloxacin MIC is ≥4 μg/ml and 28 isolates for which the ciprofloxacin MIC is ≤2 μg/ml. The amino acid substitutions in ParC conferring low-level resistance (MICs, 4 to 8 μg/ml) included Phe, Tyr, and Ala for Ser-79; Asn, Ala, Gly, Tyr, and Val for Asp-83; Asn for Asp-78; and Pro for Ala-115. Isolates with intermediate-level (MICs, 16 to 32 μg/ml) and high-level (MICs, 64 μg/ml) resistance harbored substitutions of Phe and Tyr for Ser-79 or Asn and Ala for Asp-83 in ParC and an additional substitution in GyrA which included either Glu-85-Lys (Gly) or Ser-81-Phe (Tyr). Glu-85-Lys was found exclusively in isolates with high-level resistance. Efflux contributed primarily to low-level resistance in isolates with or without an amino acid substitution in ParC. The impact of amino acid substitutions in ParE was minimal, and no substitutions in GyrB were identified.
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- 2000
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49. A Cross-Canada Surveillance of Antimicrobial Resistance in Respiratory Tract Pathogens
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Ross J Davidson, null Canadian Bacterial Surveillance Network, and Donald E Low
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Microbiology (medical) ,biology ,business.industry ,medicine.disease_cause ,biology.organism_classification ,Haemophilus influenzae ,Microbiology ,lcsh:Infectious and parasitic diseases ,Moraxella catarrhalis ,Antibiotic resistance ,medicine.anatomical_structure ,Streptococcus pneumoniae ,medicine ,Original Article ,lcsh:RC109-216 ,business ,Respiratory tract - Abstract
OBJECTIVE: To determine the prevalence of antimicrobial resistance in clinical isolates ofStreptococcus pneumoniae, Haemophilus influenzaeandMoraxella catarrhalisfrom medical centres across Canada.METHODS: Fifty laboratories from across Canada were asked to collect up to 25 consecutive clinical isolates ofS pneumoniae,H influenzaeandM catarrhalisat some time between September 1994 and May 1995, and then again between September and December of 1996. A total of 2364S pneumoniae, 575H influenzaeand 200M catarrhalissamples were collected.H influenzaeandM catarrhalisisolates were tested for the production of beta-lactamase.S pneumoniaeisolates were characterized as penicillin susceptible, intermediately resistant or high level penicillin-resistant. Minimal inhibitory concentrations (MICs) were determined using a microbroth dilution technique described by the National Committee of Clinical Laboratory Standards.RESULTS: Between the two collection periods, there was a significant increase in highly penicillin-resistantS pneumoniaefrom 2.1% to 4.4% (PS pneumoniaewas noted among paediatric isolates. No significant difference in the susceptibilities of comparator agents was detected. A significant increase in the number of beta-lactamase producingH influenzae, 34% to 43% (PM catarrhalisisolates were beta-lactamase producers in both time periods.CONCLUSIONS: During the course of this study, the incidence of penicillin resistance inS pneumoniaedoubled. As a result of this increase, infections due to this organism in sites where poor penetration of beta-lactam antibiotics occur may become increasingly difficult to manage.
- Published
- 1999
50. Detection of Mumps Virus RNA by Real-Time One-Step Reverse Transcriptase PCR Using the LightCycler Platform
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Jason J. Leblanc, Janice Pettipas, Ross J. Davidson, Todd F. Hatchette, Joanne Hiebert, and Graham Tipples
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Microbiology (medical) ,Paramyxoviridae ,RNase P ,Mumps virus ,Biology ,medicine.disease_cause ,Sensitivity and Specificity ,Ribonuclease P ,Virus ,law.invention ,law ,Virology ,medicine ,Humans ,Rubulavirus ,Mononegavirales ,Mumps ,Polymerase chain reaction ,Reverse Transcriptase Polymerase Chain Reaction ,biology.organism_classification ,Molecular biology ,Reverse transcription polymerase chain reaction ,RNA, Viral ,Viral Fusion Proteins - Abstract
A real-time reverse transcriptase PCR (RT-PCR) assay that targeted both the mumps virus F gene and human RNase P in clinical samples was adapted for use with the LightCycler platform. LightCycler RT-PCR is as sensitive as conventional nested RT-PCR and significantly less expensive and labor-intensive, making it ideal for mumps diagnosis during outbreaks.
- Published
- 2008
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