444 results on '"Ruemmele P"'
Search Results
2. Precision medicine in monogenic inflammatory bowel disease: proposed mIBD REPORT standards
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Uhlig, Holm H., Booth, Claire, Cho, Judy, Dubinsky, Marla, Griffiths, Anne M., Grimbacher, Bodo, Hambleton, Sophie, Huang, Ying, Jones, Kelsey, Kammermeier, Jochen, Kanegane, Hirokazu, Koletzko, Sibylle, Kotlarz, Daniel, Klein, Christoph, Lenardo, Michael J., Lo, Bernice, McGovern, Dermot P. B., Özen, Ahmet, de Ridder, Lissy, Ruemmele, Frank, Shouval, Dror S., Snapper, Scott B., Travis, Simon P., Turner, Dan, Wilson, David C., and Muise, Aleixo M.
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- 2023
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3. An empirical approach and practical framework for a decentralized Ethereum Ecosystem Index (EEI)
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Manoel Fernando Alonso Gadi, Maximilian Schmidt, Noah Ruemmele, and Miguel-Angel Sicilia
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Cryptocurrency ,Index ,Ethereum ecosystem ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
Stock market indices are pivotal tools for establishing market benchmarks, enabling investors to navigate risk and volatility while capitalizing on the stock market’s prospects through index funds. For participants in decentralized finance (DeFi), the formulation of a token index emerges as a vital resource. Nevertheless, this endeavor is complex, encompassing challenges such as transaction fees and the variable availability of tokens, attributed to their brief history or limited liquidity. This research introduces an index tailored for the Ethereum ecosystem, the leading smart contract platform, and conducts a comparative analysis of capitalization-weighted (CW) and equal-weighted (EW) index performances. The article delineates exhaustive criteria for token eligibility, intending to serve as a comprehensive guide for fellow researchers. The results indicate a consistent superior performance of CW indices over EW indices in terms of return and risk metrics, with a 30-constituent CW index outshining its counterparts with varied constituent numbers. The recommended CW30 index demonstrates substantial advantages in comparison to established benchmarks, including prominent indices like DeFi Pulse Index (DPI) and CRypto IndeX (CRIX). Additionally, the article explores the practicality of implementing the CW30 in Layer 2 networks of the Ethereum Ecosystem, advocating for the Arbitrum infrastructure as the optimal choice for the decentralized crypto index protocol herein referred to as the Ethereum Ecosystem Index (EEI). The study’s insights aspire to enrich the DeFi ecosystem, offering a nuanced understanding of network selection and a strategic framework for implementation. This research significantly enhances the existing literature on index construction and performance within the Ethereum ecosystem. To our knowledge, it represents a pioneering comprehensive analysis of an index that accurately mirrors the Ethereum market, advancing our comprehension of its intricacies and wider ramifications. Moreover, this study stands as one of the initial thorough examinations of index construction methodologies within the nascent asset class of crypto. The insights gleaned provide a pragmatic approach to index construction and introduce an index poised to serve as a benchmark for index products. In illuminating the unique facets of the Ethereum ecosystem, this research makes a substantial contribution to the current discourse on crypto, offering valuable perspectives for investors, market stakeholders, and the ongoing exploration of digital assets.
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- 2024
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4. Evaluating approaches for supervised semantic labeling
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Ruemmele, Natalia, Tyshetskiy, Yuriy, and Collins, Alex
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Computer Science - Learning ,Computer Science - Artificial Intelligence ,Computer Science - Computation and Language - Abstract
Relational data sources are still one of the most popular ways to store enterprise or Web data, however, the issue with relational schema is the lack of a well-defined semantic description. A common ontology provides a way to represent the meaning of a relational schema and can facilitate the integration of heterogeneous data sources within a domain. Semantic labeling is achieved by mapping attributes from the data sources to the classes and properties in the ontology. We formulate this problem as a multi-class classification problem where previously labeled data sources are used to learn rules for labeling new data sources. The majority of existing approaches for semantic labeling have focused on data integration challenges such as naming conflicts and semantic heterogeneity. In addition, machine learning approaches typically have issues around class imbalance, lack of labeled instances and relative importance of attributes. To address these issues, we develop a new machine learning model with engineered features as well as two deep learning models which do not require extensive feature engineering. We evaluate our new approaches with the state-of-the-art.
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- 2018
5. An Empirical Investigation On Search Engine Ad Disclosure
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Lewandowski, Dirk, Kerkmann, Friederike, Ruemmele, Sandra, and Suenkler, Sebastian
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Computer Science - Information Retrieval - Abstract
This representative study of German search engine users (N=1,000) focuses on the ability of users to distinguish between organic results and advertisements on Google results pages. We combine questions about Google's business with task-based studies in which users were asked to distinguish between ads and organic results in screenshots of results pages. We find that only a small percentage of users is able to reliably distinguish between ads and organic results, and that user knowledge of Google's business model is very limited. We conclude that ads are insufficiently labelled as such, and that many users may click on ads assuming that they are selecting organic results.
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- 2017
6. Barrier Coverage with Non-uniform Lengths to Minimize Aggregate Movements
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Gaspers, Serge, Gudmundsson, Joachim, Mestre, Julián, and Rümmele, Stefan
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Computer Science - Data Structures and Algorithms ,F.2.2 - Abstract
Given a line segment $I=[0,L]$, the so-called barrier, and a set of $n$ sensors with varying ranges positioned on the line containing $I$, the barrier coverage problem is to move the sensors so that they cover $I$, while minimising the total movement. In the case when all the sensors have the same radius the problem can be solved in $O(n \log n)$ time (Andrews and Wang, Algorithmica 2017). If the sensors have different radii the problem is known to be NP-hard to approximate within a constant factor (Czyzowicz et al., ADHOC-NOW 2009). We strengthen this result and prove that no polynomial time $\rho^{1-\varepsilon}$-approximation algorithm exists unless $P=NP$, where $\rho$ is the ratio between the largest radius and the smallest radius. Even when we restrict the number of sensors that are allowed to move by a parameter $k$, the problem turns out to be W[1]-hard. On the positive side we show that a $((2+\varepsilon)\rho+2/\varepsilon)$-approximation can be computed in $O(n^3/\varepsilon^2)$ time and we prove fixed-parameter tractability when parameterized by the total movement assuming all numbers in the input are integers.
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- 2017
7. The Parameterized Complexity of Positional Games
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Bonnet, Édouard, Gaspers, Serge, Lambilliotte, Antonin, Rümmele, Stefan, and Saffidine, Abdallah
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Computer Science - Computational Complexity ,F.2.2 - Abstract
We study the parameterized complexity of several positional games. Our main result is that Short Generalized Hex is W[1]-complete parameterized by the number of moves. This solves an open problem from Downey and Fellows' influential list of open problems from 1999. Previously, the problem was thought of as a natural candidate for AW[*]-completeness. Our main tool is a new fragment of first-order logic where universally quantified variables only occur in inequalities. We show that model-checking on arbitrary relational structures for a formula in this fragment is W[1]-complete when parameterized by formula size. We also consider a general framework where a positional game is represented as a hypergraph and two players alternately pick vertices. In a Maker-Maker game, the first player to have picked all the vertices of some hyperedge wins the game. In a Maker-Breaker game, the first player wins if she picks all the vertices of some hyperedge, and the second player wins otherwise. In an Enforcer-Avoider game, the first player wins if the second player picks all the vertices of some hyperedge, and the second player wins otherwise. Short Maker-Maker is AW[*]-complete, whereas Short Maker-Breaker is W[1]-complete and Short Enforcer-Avoider co-W[1]-complete parameterized by the number of moves. This suggests a rough parameterized complexity categorization into positional games that are complete for the first level of the W-hierarchy when the winning configurations only depend on which vertices one player has been able to pick, but AW[*]-completeness when the winning condition depends on which vertices both players have picked. However, some positional games where the board and the winning configurations are highly structured are fixed-parameter tractable. We give another example of such a game, Short k-Connect, which is fixed-parameter tractable when parameterized by the number of moves., Comment: To appear in the Proceedings of the 44th International Colloquium on Automata, Languages, and Programming (ICALP 2017)
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- 2017
8. Long-term follow-up of IPEX syndrome patients after different therapeutic strategies: An international multicenter retrospective study.
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Barzaghi, Federica, Amaya Hernandez, Laura Cristina, Neven, Benedicte, Ricci, Silvia, Kucuk, Zeynep Yesim, Bleesing, Jack J, Nademi, Zohreh, Slatter, Mary Anne, Ulloa, Erlinda Rose, Shcherbina, Anna, Roppelt, Anna, Worth, Austen, Silva, Juliana, Aiuti, Alessandro, Murguia-Favela, Luis, Speckmann, Carsten, Carneiro-Sampaio, Magda, Fernandes, Juliana Folloni, Baris, Safa, Ozen, Ahmet, Karakoc-Aydiner, Elif, Kiykim, Ayca, Schulz, Ansgar, Steinmann, Sandra, Notarangelo, Lucia Dora, Gambineri, Eleonora, Lionetti, Paolo, Shearer, William Thomas, Forbes, Lisa R, Martinez, Caridad, Moshous, Despina, Blanche, Stephane, Fisher, Alain, Ruemmele, Frank M, Tissandier, Come, Ouachee-Chardin, Marie, Rieux-Laucat, Frédéric, Cavazzana, Marina, Qasim, Waseem, Lucarelli, Barbarella, Albert, Michael H, Kobayashi, Ichiro, Alonso, Laura, Diaz De Heredia, Cristina, Kanegane, Hirokazu, Lawitschka, Anita, Seo, Jong Jin, Gonzalez-Vicent, Marta, Diaz, Miguel Angel, Goyal, Rakesh Kumar, Sauer, Martin G, Yesilipek, Akif, Kim, Minsoo, Yilmaz-Demirdag, Yesim, Bhatia, Monica, Khlevner, Julie, Richmond Padilla, Erick J, Martino, Silvana, Montin, Davide, Neth, Olaf, Molinos-Quintana, Agueda, Valverde-Fernandez, Justo, Broides, Arnon, Pinsk, Vered, Ballauf, Antje, Haerynck, Filomeen, Bordon, Victoria, Dhooge, Catharina, Garcia-Lloret, Maria Laura, Bredius, Robbert G, Kałwak, Krzysztof, Haddad, Elie, Seidel, Markus Gerhard, Duckers, Gregor, Pai, Sung-Yun, Dvorak, Christopher C, Ehl, Stephan, Locatelli, Franco, Goldman, Frederick, Gennery, Andrew Richard, Cowan, Mort J, Roncarolo, Maria-Grazia, Bacchetta, Rosa, and Primary Immune Deficiency Treatment Consortium (PIDTC) and the Inborn Errors Working Party (IEWP) of the European Society for Blood and Marrow Transplantation (EBMT)
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Primary Immune Deficiency Treatment Consortium (PIDTC) and the Inborn Errors Working Party (IEWP) of the European Society for Blood and Marrow Transplantation ,Humans ,Genetic Diseases ,X-Linked ,Diabetes Mellitus ,Type 1 ,Immune System Diseases ,Diarrhea ,Disease-Free Survival ,Hematopoietic Stem Cell Transplantation ,Survival Rate ,Retrospective Studies ,Follow-Up Studies ,Mutation ,Adolescent ,Adult ,Child ,Child ,Preschool ,Infant ,Female ,Male ,Forkhead Transcription Factors ,Allografts ,Immunosuppression Therapy ,FOXP3 ,IPEX ,Treg cells ,enteropathy ,genetic autoimmunity ,hematopoietic stem cell transplantation ,immunosuppression ,neonatal diabetes ,primary immune deficiency ,rapamycin ,Clinical Research ,Stem Cell Research ,Regenerative Medicine ,Pediatric ,Genetics ,Transplantation ,Aetiology ,2.1 Biological and endogenous factors ,Immunology ,Allergy - Abstract
BackgroundImmunodysregulation polyendocrinopathy enteropathy x-linked (IPEX) syndrome is a monogenic autoimmune disease caused by FOXP3 mutations. Because it is a rare disease, the natural history and response to treatments, including allogeneic hematopoietic stem cell transplantation (HSCT) and immunosuppression (IS), have not been thoroughly examined.ObjectiveThis analysis sought to evaluate disease onset, progression, and long-term outcome of the 2 main treatments in long-term IPEX survivors.MethodsClinical histories of 96 patients with a genetically proven IPEX syndrome were collected from 38 institutions worldwide and retrospectively analyzed. To investigate possible factors suitable to predict the outcome, an organ involvement (OI) scoring system was developed.ResultsWe confirm neonatal onset with enteropathy, type 1 diabetes, and eczema. In addition, we found less common manifestations in delayed onset patients or during disease evolution. There is no correlation between the site of mutation and the disease course or outcome, and the same genotype can present with variable phenotypes. HSCT patients (n = 58) had a median follow-up of 2.7 years (range, 1 week-15 years). Patients receiving chronic IS (n = 34) had a median follow-up of 4 years (range, 2 months-25 years). The overall survival after HSCT was 73.2% (95% CI, 59.4-83.0) and after IS was 65.1% (95% CI, 62.8-95.8). The pretreatment OI score was the only significant predictor of overall survival after transplant (P = .035) but not under IS.ConclusionsPatients receiving chronic IS were hampered by disease recurrence or complications, impacting long-term disease-free survival. When performed in patients with a low OI score, HSCT resulted in disease resolution with better quality of life, independent of age, donor source, or conditioning regimen.
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- 2018
9. Intestinal immunoregulation: lessons from human mendelian diseases
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Charbit-Henrion, Fabienne, Parlato, Marianna, Malamut, Georgia, Ruemmele, Frank, and Cerf-Bensussan, Nadine
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- 2021
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10. Single-cell analysis of FOXP3 deficiencies in humans and mice unmasks intrinsic and extrinsic CD4+ T cell perturbations
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Zemmour, David, Charbonnier, Louis-Marie, Leon, Juliette, Six, Emmanuelle, Keles, Sevgi, Delville, Marianne, Benamar, Mehdi, Baris, Safa, Zuber, Julien, Chen, Karin, Neven, Benedicte, Garcia-Lloret, Maria I., Ruemmele, Frank M., Brugnara, Carlo, Cerf-Bensussan, Nadine, Rieux-Laucat, Frederic, Cavazzana, Marina, André, Isabelle, Chatila, Talal A., Mathis, Diane, and Benoist, Christophe
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- 2021
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11. UNC45A deficiency causes microvillus inclusion disease–like phenotype by impairing myosin VB–dependent apical trafficking
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Rémi Duclaux-Loras, Corinne Lebreton, Jérémy Berthelet, Fabienne Charbit-Henrion, Ophelie Nicolle, Céline Revenu de Courtils, Stephanie Waich, Taras Valovka, Anis Khiat, Marion Rabant, Caroline Racine, Ida Chiara Guerrera, Júlia Baptista, Maxime M. Mahe, Michael W. Hess, Béatrice Durel, Nathalie Lefort, Céline Banal, Mélanie Parisot, Cecile Talbotec, Florence Lacaille, Emmanuelle Ecochard-Dugelay, Arzu Meltem Demir, Georg F. Vogel, Laurence Faivre, Astor Rodrigues, Darren Fowler, Andreas R. Janecke, Thomas Müller, Lukas A. Huber, Fernando Rodrigues-Lima, Frank M. Ruemmele, Holm H. Uhlig, Filippo Del Bene, Grégoire Michaux, Nadine Cerf-Bensussan, and Marianna Parlato
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Gastroenterology ,Medicine - Abstract
Variants in the UNC45A cochaperone have been recently associated with a syndrome combining diarrhea, cholestasis, deafness, and bone fragility. Yet the mechanism underlying intestinal failure in UNC45A deficiency remains unclear. Here, biallelic variants in UNC45A were identified by next-generation sequencing in 6 patients with congenital diarrhea. Corroborating in silico prediction, variants either abolished UNC45A expression or altered protein conformation. Myosin VB was identified by mass spectrometry as client of the UNC45A chaperone and was found misfolded in UNC45AKO Caco-2 cells. In keeping with impaired myosin VB function, UNC45AKO Caco-2 cells showed abnormal epithelial morphogenesis that was restored by full-length UNC45A, but not by mutant alleles. Patients and UNC45AKO 3D organoids displayed altered luminal development and microvillus inclusions, while 2D cultures revealed Rab11 and apical transporter mislocalization as well as sparse and disorganized microvilli. All those features resembled the subcellular abnormalities observed in duodenal biopsies from patients with microvillus inclusion disease. Finally, microvillus inclusions and shortened microvilli were evidenced in enterocytes from unc45a-deficient zebrafish. Taken together, our results provide evidence that UNC45A plays an essential role in epithelial morphogenesis through its cochaperone function of myosin VB and that UNC45A loss causes a variant of microvillus inclusion disease.
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- 2022
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12. Infections in Patients with Chronic Granulomatous Disease Treated with Tumor Necrosis Factor Alpha Blockers for Inflammatory Complications
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Conrad, Anne, Neven, Bénédicte, Mahlaoui, Nizar, Suarez, Felipe, Sokol, Harry, Ruemmele, Frank M., Rouzaud, Claire, Moshous, Despina, Lortholary, Olivier, Blanche, Stéphane, and Lanternier, Fanny
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- 2021
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13. Belief merging within fragments of propositional logic
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Creignou, Nadia, Papini, Odile, Rümmele, Stefan, and Woltran, Stefan
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Computer Science - Artificial Intelligence ,Computer Science - Logic in Computer Science ,03B42 ,I.2.3 - Abstract
Recently, belief change within the framework of fragments of propositional logic has gained increasing attention. Previous works focused on belief contraction and belief revision on the Horn fragment. However, the problem of belief merging within fragments of propositional logic has been neglected so far. This paper presents a general approach to define new merging operators derived from existing ones such that the result of merging remains in the fragment under consideration. Our approach is not limited to the case of Horn fragment but applicable to any fragment of propositional logic characterized by a closure property on the sets of models of its formulae. We study the logical properties of the proposed operators in terms of satisfaction of merging postulates, considering in particular distance-based merging operators for Horn and Krom fragments., Comment: To appear in the Proceedings of the 15th International Workshop on Non-Monotonic Reasoning (NMR 2014)
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- 2014
14. Backdoors to Abduction
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Pfandler, Andreas, Rümmele, Stefan, and Szeider, Stefan
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Computer Science - Artificial Intelligence ,Computer Science - Computational Complexity ,Computer Science - Logic in Computer Science - Abstract
Abductive reasoning (or Abduction, for short) is among the most fundamental AI reasoning methods, with a broad range of applications, including fault diagnosis, belief revision, and automated planning. Unfortunately, Abduction is of high computational complexity; even propositional Abduction is \Sigma_2^P-complete and thus harder than NP and coNP. This complexity barrier rules out the existence of a polynomial transformation to propositional satisfiability (SAT). In this work we use structural properties of the Abduction instance to break this complexity barrier. We utilize the problem structure in terms of small backdoor sets. We present fixed-parameter tractable transformations from Abduction to SAT, which make the power of today's SAT solvers available to Abduction., Comment: 12 pages, a short version will appear in the proceedings of the 23rd International Joint Conference on Artificial Intelligence (IJCAI 2013)
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- 2013
15. Investigating the Growth of Algae Under Low Atmospheric Pressures for Potential Food and Oxygen Production on Mars
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Leena M. Cycil, Elisabeth M. Hausrath, Douglas W. Ming, Christopher T. Adcock, James Raymond, Daniel Remias, and Warren P. Ruemmele
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BLSS ,life on mars ,space biology ,low pressure chamber ,extremophilic algae ,Microbiology ,QR1-502 - Abstract
With long-term missions to Mars and beyond that would not allow resupply, a self-sustaining Bioregenerative Life Support System (BLSS) is essential. Algae are promising candidates for BLSS due to their completely edible biomass, fast growth rates and ease of handling. Extremophilic algae such as snow algae and halophilic algae may also be especially suited for a BLSS because of their ability to grow under extreme conditions. However, as indicated from over 50 prior space studies examining algal growth, little is known about the growth of algae at close to Mars-relevant pressures. Here, we explored the potential for five algae species to produce oxygen and food under low-pressure conditions relevant to Mars. These included Chloromonas brevispina, Kremastochrysopsis austriaca, Dunaliella salina, Chlorella vulgaris, and Spirulina plantensis. The cultures were grown in duplicate in a low-pressure growth chamber at 670 ± 20 mbar, 330 ± 20 mbar, 160 ± 20 mbar, and 80 ± 2.5 mbar pressures under continuous light exposure (62–70 μmol m–2 s–1). The atmosphere was evacuated and purged with CO2 after sampling each week. Growth experiments showed that D. salina, C. brevispina, and C. vulgaris were the best candidates to be used for BLSS at low pressure. The highest carrying capacities for each species under low pressure conditions were achieved by D. salina at 160 mbar (30.0 ± 4.6 × 105 cells/ml), followed by C. brevispina at 330 mbar (19.8 ± 0.9 × 105 cells/ml) and C. vulgaris at 160 mbar (13.0 ± 1.5 × 105 cells/ml). C. brevispina, D. salina, and C. vulgaris all also displayed substantial growth at the lowest tested pressure of 80 mbar reaching concentrations of 43.4 ± 2.5 × 104, 15.8 ± 1.3 × 104, and 57.1 ± 4.5 × 104 cells per ml, respectively. These results indicate that these species are promising candidates for the development of a Mars-based BLSS using low pressure (∼200–300 mbar) greenhouses and inflatable structures that have already been conceptualized and designed.
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- 2021
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16. Tractable Answer-Set Programming with Weight Constraints: Bounded Treewidth is not Enough
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Pichler, Reinhard, Rümmele, Stefan, Szeider, Stefan, and Woltran, Stefan
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Computer Science - Logic in Computer Science ,Computer Science - Artificial Intelligence ,Computer Science - Computational Complexity - Abstract
Cardinality constraints or, more generally, weight constraints are well recognized as an important extension of answer-set programming. Clearly, all common algorithmic tasks related to programs with cardinality or weight constraints - like checking the consistency of a program - are intractable. Many intractable problems in the area of knowledge representation and reasoning have been shown to become linear time tractable if the treewidth of the programs or formulas under consideration is bounded by some constant. The goal of this paper is to apply the notion of treewidth to programs with cardinality or weight constraints and to identify tractable fragments. It will turn out that the straightforward application of treewidth to such class of programs does not suffice to obtain tractability. However, by imposing further restrictions, tractability can be achieved., Comment: To appear in Theory and Practice of Logic Programming (TPLP)
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- 2012
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17. Improved Clinical Outcomes With Early Anti-Tumour Necrosis Factor Alpha Therapy in Children With Newly Diagnosed Crohn's Disease: Real-world Data from the International Prospective PIBD-SETQuality Inception Cohort Study.
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Klomberg, Renz C W, Wal, Hella C van der, Aardoom, Martine A, Kemos, Polychronis, Rizopoulos, Dimitris, Ruemmele, Frank M, Charrout, Mohammed, Escher, Hankje C, Croft, Nicholas M, Ridder, Lissy de, and group, PIBD-SETQuality collaborative
- Abstract
Background and Aims Treatment guidelines for paediatric Crohn's disease [CD] suggest early use of anti-tumour necrosis factor alpha [anti-TNFα] in high-risk individuals. The aim is to evaluate the effect of early anti-TNF in a real-world cohort. Methods Children with newly diagnosed CD were prospectively recruited at 28 participating sites of the international observational PIBD-SETQuality study. Outcomes were compared at 3 months, 1 and 2 years between patients receiving early anti-TNF [<90 days after diagnosis] and those not receiving early anti-TNF. Outcomes included sustained steroid-free remission [SSFR] without treatment intensification [specified as SSFR*] and sustained steroid-free mild/inactive disease without treatment intensification [specified as SSFMI*]. Penalised logistic regression model-based standardisation was applied to estimate the relative risks [RR] of early therapy on outcomes. RRs were estimated for high-risk and low-risk patients, based on presence of predictors of poor outcome [POPOs] and disease activity at diagnosis. Results In total, 331 children (median age 13.9 years [IQR 12.2–15.3]) were enrolled, with 135 [41%] receiving early anti-TNF. At 1 year, patients on early anti-TNF had higher rates of SSFR* [30% vs 14%, p <0.001] and SSFMI* [69% vs 33%, p <0.001], with RRs of 2.95 [95% CI 1.63-5.36] and 4.67 [95% CI 2.46-8.87], respectively. At 1 year, the RRs for SSFMI* were higher, and statistically significant in high-risk patients, i.e. those with moderate/severe disease compared with mild/inactive disease at diagnosis (5.50 [95% CI 2.51-12.05] vs 2.91 [95% CI 0.92-9.11]), and those with any POPO compared with no POPO (5.05 [95% CI 2.45-10.43] vs 3.41 [95% CI 0.54-21.7]). Conclusion In this cohort of children with newly-diagnosed CD, early anti-TNF demonstrated superior effectiveness in high-risk patients. [ABSTRACT FROM AUTHOR]
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- 2024
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18. A urinary metabolite constellation to detect acute rejection in kidney allografts
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Miriam C. Banas, Sindy Neumann, Philipp Pagel, Franz Josef Putz, Bernhard K. Krämer, Georg A. Böhmig, Johannes Eiglsperger, Eric Schiffer, Petra Ruemmele, and Bernhard Banas
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Medicine ,Medicine (General) ,R5-920 - Abstract
Background: To validate a novel method for post-transplant surveillance to detect kidney allograft rejection via a characteristic constellation of the urine metabolites alanine, citrate, lactate, and urea investigated by nuclear magnetic resonance (NMR) spectroscopy a first prospective, observational study was performed. Methods: Within the UMBRELLA study 986 urine specimens were collected from 109 consecutively enrolled renal transplant recipients, and metabolite constellations were analyzed. A metabolite rejection score was calculated and compared to histopathological results of corresponding indication and protocol allograft biopsies (n = 206). Findings: The metabolite constellation was found to be a useful biomarker to non-invasively detect acute allograft rejection (AUC = 0.75; 95% confidence interval (CI) 0.68–0.83; based on 46 cases and 520 control samples). Combined analysis of the metabolite rejection score and the estimated glomerular filtration rate (eGFR) at the time of urine sampling further improved the overall test performance significantly (AUC = 0.84; 95% CI 0.76–0.91; based on 42 cases and 468 controls). Regarding the time course analysis in patients without rejection episodes the test results remained well below a diagnostic threshold associated with high risk of acute rejection. In other cases, a marked increase above this threshold indicated acute allograft rejection already six to ten days before diagnostic renal biopsies were performed. Interpretation: A combination of an NMR-based urine metabolite analysis and eGFR is promising as a non-invasive test for post-transplant surveillance and to support decision making whether renal allografts need histopathological evaluation. Keywords: Kidney transplant rejection, Urinary metabolites, Biomarker, NMR-spectroscopy, Non-invasive test
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- 2019
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19. International prospective observational study investigating the disease course and heterogeneity of paediatric-onset inflammatory bowel disease: the protocol of the PIBD-SETQuality inception cohort study
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Sibylle Koletzko, Richard K Russell, Arie Levine, Dan Turner, Lissy de Ridder, Frank M Ruemmele, Martine A Aardoom, Janneke N Samsom, Nicholas M Croft, Marina Aloi, Gigi Veereman, Mattias Neyt, Polychronis Kemos, Irma Tindemans, and Thomas D Walters
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Medicine - Abstract
Introduction Patients with paediatric-onset inflammatory bowel disease (PIBD) may develop a complicated disease course, including growth failure, bowel resection at young age and treatment-related adverse events, all of which can have significant and lasting effects on the patient’s development and quality of life. Unfortunately, we are still not able to fully explain the heterogeneity between patients and their disease course and predict which patients will respond to certain therapies or are most at risk of developing a more complicated disease course. To investigate this, large prospective studies with long-term follow-up are needed. Currently, no such European or Asian international cohorts exist. In this international cohort, we aim to evaluate disease course and which patients are most at risk of therapy non-response or development of complicated disease based on patient and disease characteristics, immune pathology and environmental and socioeconomic factors.Methods and analysis In this international prospective observational study, which is part of the PIBD Network for Safety, Efficacy, Treatment and Quality improvement of care (PIBD-SETQuality), children diagnosed with inflammatory bowel disease
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- 2020
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20. Protocol for a multinational risk-stratified randomised controlled trial in paediatric Crohn’s disease: methotrexate versus azathioprine or adalimumab for maintaining remission in patients at low or high risk for aggressive disease course
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Sibylle Koletzko, Richard K Russell, Arie Levine, Dan Turner, Rachel E Harris, Lissy de Ridder, Frank M Ruemmele, Nicholas M Croft, Marina Aloi, Gigi Veereman, Mattias Neyt, and Laetitia Bigot
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Medicine - Abstract
Introduction Immunomodulators such as thiopurines (azathioprine (AZA)/6-mercaptopurine (6MP)), methotrexate (MTX) and biologics such as adalimumab (ADA) are well established for maintenance of remission within paediatric Crohn’s disease (CD). It remains unclear, however, which maintenance medication should be used first line in specific patient groups.Aims To compare the efficacy of maintenance therapies in newly diagnosed CD based on stratification into high and low-risk groups for severe CD evolution; MTX versus AZA/6MP in low-risk and MTX versus ADA in high-risk patients. Primary end point: sustained remission at 12 months (weighted paediatric CD activity index ≤12.5 and C reactive protein ≤1.5 fold upper limit) without relapse or ongoing requirement for exclusive enteral nutrition (EEN)/steroids 12 weeks after treatment initiation.Methods and analysis REDUCE-RISK in CD is an international multicentre open-label prospective randomised controlled trial funded by EU within the Horizon2020 framework (grant number 668023). Eligible patients (aged 6–17 years, new-onset disease receiving steroids or EEN for induction of remission for luminal ± perianal CD are stratified into low and high-risk groups based on phenotype and response to induction therapy. Participants are randomised to one of two treatment arms within their risk group: low-risk patients to weekly subcutaneous MTX or daily oral AZA/6MP, and high-risk patients to weekly subcutaneous MTX or fortnightly ADA. Patients are followed up for 12 months at prespecified intervals. Electronic case report forms are completed prospectively. The study aims to recruit 312 participants (176 low risk; 136 high risk).Ethics and dissemination ClinicalTrials.gov Identifier: (NCT02852694), authorisation and approval from local ethics committees have been obtained prior to recruitment. Individual informed consent will be obtained prior to participation in the study. Results will be published in a peer-reviewed journal with open access.Trial registration number NCT02852694; Pre-results.
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- 2020
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21. Infectious and digestive complications in glycogen storage disease type Ib: Study of a French cohort
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Camille Wicker, Célina Roda, Ariane Perry, Jean Baptiste Arnoux, Anais Brassier, Martin Castelle, Aude Servais, Jean Donadieu, Juliette Bouchereau, Bénédicte Pigneur, Philippe Labrune, Frank M. Ruemmele, and Pascale de Lonlay
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Glycogen storage disease type 1B ,Neutropenia ,Inflammatory bowel disease ,Harvey Bradshaw score ,Anti-inflammatory solutions ,Medicine (General) ,R5-920 ,Biology (General) ,QH301-705.5 - Abstract
Glycogenosis type Ib (GSD1B) causes not only hypoglycemia but also infections and “Crohn's disease like” inflammatory bowel disease (IBD) that can significantly impair patient's quality of life. We retrospectively evaluated infectious and digestive complications in 9 French patients (3 girls, 6 boys) diagnosed at 0.8 years on average, with a mean follow-up of 19.1 years. Infections occurred earlier than IBD, at mean ages of 1.7 and 3.8 years, respectively. The number of acute hospitalizations was 0.7/year due to infectious (0.4/year) or digestive symptoms (0.4/year). Clinical presentations allowed separating patients into mild (n = 5) and severe (n = 4) intestinal involvement. Patients in the severe group had more serious digestive symptoms but also earlier neutropenia (median 0.3 vs. 1.5 years, p =0 .046) with a tendency to a lower neutrophil count (NC) during follow-up, and a higher number of acute hospitalizations (median 1.3/year vs. 0.2/year, p =0 .014) due to digestive symptoms (median 0.6/year vs. 0.05/year, p = 0,012) and infections (median 0.8/year vs. 0.2/year, p =0 .014). Treatments included G-CSF and cotrimoxazole (n = 7), 5-aminosalicylic acid (n = 2), and a polymeric solution enriched in the anti-inflammatory cytokine TGF-β (n = 4, “severe” group), and immunomodulatory treatment (n = 1). In conclusion, infections and IBD are rare but severe complications in GSD1B. Neutropenia tended to be more prevalent in the severe IBD group than in the mild IBD group. Dietetic treatment with specific anti-inflammatory solutions seems particularly appropriate in these patients.
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- 2020
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22. Human ALPI deficiency causes inflammatory bowel disease and highlights a key mechanism of gut homeostasis
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Marianna Parlato, Fabienne Charbit‐Henrion, Jie Pan, Claudio Romano, Rémi Duclaux‐Loras, Marie‐Helene Le Du, Neil Warner, Paola Francalanci, Julie Bruneau, Marc Bras, Mohammed Zarhrate, Bernadette Bègue, Nicolas Guegan, Sabine Rakotobe, Nathalie Kapel, Paola De Angelis, Anne M Griffiths, Karoline Fiedler, Eileen Crowley, Frank Ruemmele, Aleixo M Muise, and Nadine Cerf‐Bensussan
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inflammatory bowel diseases ,intestinal phosphatase alkaline ,monogenic disease ,Medicine (General) ,R5-920 ,Genetics ,QH426-470 - Abstract
Abstract Herein, we report the first identification of biallelic‐inherited mutations in ALPI as a Mendelian cause of inflammatory bowel disease in two unrelated patients. ALPI encodes for intestinal phosphatase alkaline, a brush border metalloenzyme that hydrolyses phosphate from the lipid A moiety of lipopolysaccharides and thereby drastically reduces Toll‐like receptor 4 agonist activity. Prediction tools and structural modelling indicate that all mutations affect critical residues or inter‐subunit interactions, and heterologous expression in HEK293T cells demonstrated that all ALPI mutations were loss of function. ALPI mutations impaired either stability or catalytic activity of ALPI and rendered it unable to detoxify lipopolysaccharide‐dependent signalling. Furthermore, ALPI expression was reduced in patients’ biopsies, and ALPI activity was undetectable in ALPI‐deficient patient's stool. Our findings highlight the crucial role of ALPI in regulating host–microbiota interactions and restraining host inflammatory responses. These results indicate that ALPI mutations should be included in screening for monogenic causes of inflammatory bowel diseases and lay the groundwork for ALPI‐based treatments in intestinal inflammatory disorders.
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- 2018
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23. Risk factors for surgery in stricturing small bowel Crohn's disease: A retrospective cohort study from the GETAID pédiatrique
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Lacotte, Edouard, Boujonnier, Louis, Martinez‐Vinson, Christine, Viala, Jérôme, Ley, Delphine, Coopman, Stéphanie, Lerisson, Héloïse, Dabadie, Alain, Dumant‐Forrest, Clémentine, Pigneur, Bénédicte, Ruemmele, Frank, Enaud, Raphael, Comte, Aurélie, Rebeuh, Julie, Bertrand, Valérie, Caron, Nicolas, Breton, Anne, Duclaux‐Loras, Rémi, Vasies, Ioana, and Dupont‐Lucas, Claire
- Abstract
Previous studies have shown rates of surgical resection of up to 41% in stricturing pediatric Crohn's disease (CD). In this retrospective multicenter study, our aims were to identify clinical risk factors and magnetic resonance enterography (MRE) features of small bowel strictures associated with surgery. Pediatric patients with symptomatic stricturing small bowel CD (defined as obstructive symptoms or proximal dilatation on MRE) confirmed by MRE between 2010 and 2020 were recruited from 12 French tertiary hospitals. Patient characteristics were compared by surgical outcome multivariable Cox regression. Fifty‐six patients (61% boys) aged 12.2 ± 2.7 years at diagnosis of CD were included. Median duration of CD before diagnosis of stricture was 11.7 months (interquartile range [IQR]: 25–75: 1.2–29.9). Nineteen (34%) patients had stricturing phenotype (B2) at baseline. Treatments received before stricture diagnosis included MODULEN‐IBD (n= 31), corticosteroids (n= 35), antibiotics (n= 10), anti‐TNF (n= 27), immunosuppressants (n= 28). Thirty‐six patients (64%) required surgery, within 4.8 months (IQR: 25–75: 1.8–17.3) after stricture diagnosis. Parameters associated with surgical resection were antibiotic exposure before stricture diagnosis (adjusted odds ratio [aOR]: 15.62 [3.35–72.73], p= 0.0005), Crohn's disease obstructive symptoms score (CDOS) > 4 (aOR: 3.04 [1.15–8.03], p= 0.02) and dilation proximal to stricture >28 mm (aOR: 3.62 [1.17–11.20], p= 0.03). In this study, antibiotic treatment before stricture diagnosis, intensity of obstructive symptoms, and diameter of dilation proximal to small bowel stricture on MRE were associated with risk for surgical resection. Prevalence of strictures in pediatric Crohn's disease range from 20% at diagnosis to 40% after 10 years of disease.Currently no treatment can reverse the fibrosing process.Early surgery might be beneficial in some patients: thus, it is important to identify patients with a high probability of failure of medical treatment, leading to discuss early surgery. Prevalence of strictures in pediatric Crohn's disease range from 20% at diagnosis to 40% after 10 years of disease. Currently no treatment can reverse the fibrosing process. Early surgery might be beneficial in some patients: thus, it is important to identify patients with a high probability of failure of medical treatment, leading to discuss early surgery. In this study, small bowel dilation proximal to the stricture of >28 mm on magnetic resonance enterography was associated with risk of surgical resection.Previous exposure to antibiotics increased the odds of surgery for small bowel stricture. In this study, small bowel dilation proximal to the stricture of >28 mm on magnetic resonance enterography was associated with risk of surgical resection. Previous exposure to antibiotics increased the odds of surgery for small bowel stricture.
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- 2024
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24. Efficacy of infliximab after loss of response of/intolerance to adalimumab in pediatric Crohn's disease: A retrospective multicenter cohort study of the “GETAID pédiatrique”
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Lecoutour, Anne, Dupont, Claire, Caldari, Dominique, Dumant, Clémentine, Vanrenterghem, Audrey, Ruiz, Mathias, Duclaux‐Loras, Rémi, Berthet, Stéphanie, Dimitrov, Georges, Lacroix, Delphine, Duvant, Pauline, Roman, Céline, Wagner, Anne Claire, Bourmaud, Aurélie, Viala, Jérôme, Ruemmele, Frank M., and Pigneur, Bénédicte
- Abstract
Infliximab (IFX) and adalimumab (ADA) are recommended for induction and maintenance of remission in pediatric Crohn's disease (CD). ADA is now often used in first line due to its efficacy and tolerability, but a loss of response (LOR) can occur over time. The aim was to assess the efficacy of IFX as second line therapy after LOR or intolerance to ADA in pediatric CD patients at 1 year. We conducted a retrospective and multicenter study in France among the “GETAID pédiatrique” centers between April 2019 and April 2022. CD patients under 18 years old and treated with IFX after ADA failure or intolerance were included. We collected anthropometric, clinical, and biological data at baseline (start of IFX), at 6 and 12 months. Clinical remission was defined by a Weighted Pediatric CD Activity Index (wPCDAI) score less than 12.5 points. Of the 32 patients included in our study, 27 (84.4%) were still on IFX at 12 months of the switch. Among them, 13 had discontinued ADA because of a LOR, 12 for insufficient response and 2 due to primary nonresponse. At M12, 22 patients were in corticosteroid free clinical remission (68.7%). Under IFX, the wPCDAI decreased over time (47.5 ± 24.1, 16.6 ± 21.2 and 9.7 ± 19.0 at M0, M6 and M12 respectively). The only factor associated with clinical remission at 12 months was absence of perianal disease at the end of the IFX induction. IFX is effective in maintaining remission at 1 year in pediatric CD patients experiencing a LOR or intolerance with ADA, and IFX could be an interesting therapeutic choice instead of other biologics in this situation. Effectiveness of the switch from SC Adalimumab to IV Infliximab in pediatric Crohn's disease patients. Adalimumab (ADA) and Infliximab (IFX) are recommended for induction and maintenance of remission in pediatric Crohn's disease (CD).Currently ADA is often used as first line therapy. Adalimumab (ADA) and Infliximab (IFX) are recommended for induction and maintenance of remission in pediatric Crohn's disease (CD). Currently ADA is often used as first line therapy. We demonstrated the efficacy of IFX as second line therapy after loss of response (LOR) or intolerance to ADA in pediatric CD patients at 1 year.IFX could be an interesting therapeutic choice in patients experiencing LOR to ADA before switching for another class of biotherapy. We demonstrated the efficacy of IFX as second line therapy after loss of response (LOR) or intolerance to ADA in pediatric CD patients at 1 year. IFX could be an interesting therapeutic choice in patients experiencing LOR to ADA before switching for another class of biotherapy.
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- 2024
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25. Renal allograft rejection, lymphocyte infiltration, and de novo donor-specific antibodies in a novel model of non-adherence to immunosuppressive therapy
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Louisa Kühne, Bettina Jung, Helen Poth, Antonia Schuster, Simone Wurm, Petra Ruemmele, Bernhard Banas, and Tobias Bergler
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Donor specific antibodies ,Humoral rejection ,Renal transplantation ,Non-adherence ,Leukocyte infiltration ,BAFF ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Abstract Background Non-adherence has been associated with reduced graft survival. The aim of this study was to investigate the immunological mechanisms underlying chronic renal allograft rejection using a model of non-adherence to immunosuppressive therapy. We used a MHC (major histocompatibility complex) -mismatched rat model of renal transplantation (Brown Norway to Lewis), in which rats received daily oral cyclosporine A. In analogy to non-adherence to therapy, one group received cyclosporine A on alternating days only. Rejection was histologically graded according to the Banff classification. We quantified fibrosis by trichrome staining and intra-graft infiltration of T cells, B cells, and monocytes/macrophages by immunohistochemistry. The distribution of B lymphocytes was assessed using immunofluorescence microscopy. Intra-graft chemokine, chemokine receptor, BAFF (B cell activating factor belonging to the TNF family), and immunoglobulin G transcription levels were analysed by RT-PCR. Finally, we evaluated donor-specific antibodies (DSA) and complement-dependent cytotoxicity using flow cytometry. Results After 28 days, cellular rejection occurred during non-adherence in 5/6 animals, mixed with humoral rejection in 3/6 animals. After non-adherence, the number of T lymphocytes were elevated compared to daily immunosuppression. Monocyte numbers declined over time. Accordingly, lymphocyte chemokine transcription was significantly increased in the graft, as was the transcription of BAFF, BAFF receptor, and Immunoglobulin G. Donor specific antibodies were elevated in non-adherence, but did not induce complement-dependent cytotoxicity. Conclusion Cellular and humoral rejection, lymphocyte infiltration, and de novo DSA are induced in this model of non-adherence.
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- 2017
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26. Nutritional interventions for the treatment of IBD: current evidence and controversies
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Bénédicte Pigneur and Frank M. Ruemmele
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Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Environmental factors, particularly diet, are the focus of current research as potential triggers of inflammatory bowel disease (IBD). Epidemiological cohort data showing a rapid increase of IBD in western countries and the emergence of IBD in developing countries paralleling the introduction of a western diet are indirect arguments linking food and food behaviour to intestinal inflammation. The successful use of exclusive enteral nutrition (EEN), now considered as first-line induction therapy for paediatric Crohn’s disease (CD), is the strongest argument for a link between diet and IBD. Mechanistic studies revealed that EEN impacts intestinal microbiota composition and together with the exclusion of potentially harmful food ingredients this allows the control of intestinal inflammation and induces mucosal healing. However, the exclusivity character of EEN is a major drawback. Based on the data of EEN, the search for more tolerable and still effective diets has begun. Recent reports on the new CD exclusion diet (CDED), CD-TREAT, as well as the specific carbohydrate diet (SCD) provide the first promising results, further underlining the potential of diet to control inflammation in patients with CD by excluding certain food components. Ongoing research is trying to combine nutritional interventions with analyses of intestinal microbiota and their metabolic functions with the aim of correcting the intestinal dysbiosis that characterizes IBD. This research is promising and gives new hope to patients that have been looking for decades for nutritional interventions with the aim of stabilizing their disease course. There might even be potential for disease prevention in high-risk patients by excluding potentially harmful food components.
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- 2019
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27. The Continental Divide: Anti-TNF Use in Pediatric IBD Is Different in North America Compared to Other Parts of the World
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Peter C. Church, Jeffrey Hyams, Frank Ruemmele, Lissy de Ridder, Dan Turner, and Anne M. Griffiths
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Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Background and Aims. Use of anti-TNF therapies varies internationally. As an initiative of the international Pediatric IBD Network (PIBDNet), we compared global pediatric IBD anti-TNF practice patterns. Methods. Physicians were surveyed about anti-TNF use in Crohn’s disease (CD) and ulcerative colitis (UC). Chi-squared, independent samples Mann–Whitney U, or related samples Wilcoxon signed rank tests were used to compare groups. Results. 344 physicians treating pediatric IBD responded from 43 countries (54% North America, 29% Europe, 6% Oceania, 6% Asia, 3% Africa, and 2% South America). Respondents treated a median 40 IBD patients. CD was more commonly treated with anti-TNF than UC (40% vs. 10%, p
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- 2018
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28. Copy number variations and founder effect underlying complete IL-10Rβ deficiency in Portuguese kindreds.
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Fabienne Charbit-Henrion, Bernadette Bègue, Anaïs Sierra, Sylvain Hanein, Marie-Claude Stolzenberg, Zhi Li, Sandra Pellegrini, Nicolas Garcelon, Marc Jeanpierre, Bénédicte Neven, Isabelle Loge, Capucine Picard, Jérémie Rosain, Jacinta Bustamante, Marc Le Lorc'h, Bénédicte Pigneur, Alicia Fernandes, GENIUS Group, Frédéric Rieux-Laucat, Jorge Amil Dias, Frank M Ruemmele, and Nadine Cerf-Bensussan
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Medicine ,Science - Abstract
Mutations in interleukin-10 receptor (IL-10R) genes are one cause of very early-onset inflammatory bowel disease with perianal lesions, which can be cured by hematopoietic stem cell transplantation. Using a functional test, which assesses responsiveness of peripheral monocytes to IL-10, we identified three unrelated Portuguese patients carrying two novel IL-10RB mutations. In the three patients, sequencing of genomic DNA identified the same large deletion of exon 3 which precluded protein expression. This mutation was homozygous in two patients born from consanguineous families and heterozygous in the third patient born from unrelated parents. Microsatellite analysis of the IL10RB genomic region revealed a common haplotype in the three Portuguese families pointing to a founder deletion inherited from a common ancestor 400 years ago. In the third patient, surface expression of IL-10R was normal but signaling in response to IL-10 was impaired. Complementary DNA sequencing and next-generation sequencing of IL10RB locus with custom-made probes revealed a ≈ 6 Kb duplication encompassing the exon 6 which leads to a frameshift mutation and a loss of the TYK2-interacting Box 2 motif. Altogether, we describe two novel copy number variations in IL10RB, one with founder effect and one preserving cell surface expression but abolishing signaling.
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- 2018
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29. Toward Enteral Nutrition in the Treatment of Pediatric Crohn Disease in Canada: A Workshop to Identify Barriers and Enablers
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Johan Van Limbergen, Jennifer Haskett, Anne M Griffiths, Jeff Critch, Hien Huynh, Najma Ahmed, Jennifer C deBruyn, Robert Issenman, Wael El-Matary, Thomas D Walters, Cheryl Kluthe, Marie-Eve Roy, Elizabeth Sheppard, Wallace V Crandall, Stan Cohen, Frank M Ruemmele, Arie Levine, and Anthony R Otley
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Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
The treatment armamentarium in pediatric Crohn disease (CD) is very similar to adult-onset CD with the notable exception of the use of exclusive enteral nutrition (EEN [the administration of a liquid formula diet while excluding normal diet]), which is used more frequently by pediatric gastroenterologists to induce remission. In pediatric CD, EEN is now recommended by the pediatric committee of the European Crohn’s and Colitis Organisation and the European Society for Paediatric Gastroenterology Hepatology and Nutrition as a first-choice agent to induce remission, with remission rates in pediatric studies consistently >75%. To chart and address enablers and barriers of use of EEN in Canada, a workshop was held in September 2014 in Toronto (Ontario), inviting pediatric gastroenterologists, nurses and dietitians from most Canadian pediatric IBD centres as well as international faculty from the United States and Europe with particular research and clinical expertise in the dietary management of pediatric CD. Workshop participants ranked the exclusivity of enteral nutrition; the health care resources; and cost implications as the top three barriers to its use. Conversely, key enablers mentioned included: standardization and sharing of protocols for use of enteral nutrition; ensuring sufficient dietetic resources; and reducing the cost of EEN to the family (including advocacy for reimbursement by provincial ministries of health and private insurance companies). Herein, the authors report on the discussions during this workshop and list strategies to enhance the use of EEN as a treatment option in the treatment of pediatric CD in Canada.
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- 2015
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30. Clinical Heterogeneity of Immune Dysregulation, Polyendocrinopathy, Enteropathy, X-Linked Syndrome: A French Multicenter Retrospective Study
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Duclaux-Loras, R., Charbit-Henrion, F., Neven, B., Nowak, J., Collardeau-Frachon, S., Malcus, C., Ray, P. F., Moshous, D., Beltrand, J., Goulet, O., Cerf-Bensussan, N., Lachaux, A., Rieux-Laucat, F., and Ruemmele, F. M.
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- 2018
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31. Human ALPI deficiency causes inflammatory bowel disease and highlights a key mechanism of gut homeostasis
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Parlato, Marianna, Charbit‐Henrion, Fabienne, Pan, Jie, Romano, Claudio, Duclaux‐Loras, Rémi, Le Du, Marie‐Helene, Warner, Neil, Francalanci, Paola, Bruneau, Julie, Bras, Marc, Zarhrate, Mohammed, Bègue, Bernadette, Guegan, Nicolas, Rakotobe, Sabine, Kapel, Nathalie, De Angelis, Paola, Griffiths, Anne M, Fiedler, Karoline, Crowley, Eileen, Ruemmele, Frank, Muise, Aleixo M, and Cerf‐Bensussan, Nadine
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- 2018
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32. Attenuated lipotoxicity and apoptosis is linked to exogenous and endogenous augmenter of liver regeneration by different pathways.
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Thomas S Weiss, Madeleine Lupke, Sara Ibrahim, Christa Buechler, Julia Lorenz, Petra Ruemmele, Ute Hofmann, Michael Melter, and Rania Dayoub
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Medicine ,Science - Abstract
Nonalcoholic fatty liver disease (NAFLD) covers a spectrum from simple steatosis to nonalcoholic steatohepatitis (NASH) and cirrhosis. Free fatty acids (FFA) induce steatosis and lipo-toxicity and correlate with severity of NAFLD. In this study we aimed to investigate the role of exogenous and endogenous ALR (augmenter of liver regeneration) for FFA induced ER (endoplasmatic reticulum) -stress and lipoapoptosis. Primary human hepatocytes or hepatoma cells either treated with recombinant human ALR (rhALR, 15kDa) or expressing short form ALR (sfALR, 15kDa) were incubated with palmitic acid (PA) and analyzed for lipo-toxicity, -apoptosis, activation of ER-stress response pathways, triacylglycerides (TAG), mRNA and protein expression of lipid metabolizing genes. Both, exogenous rhALR and cytosolic sfALR reduced PA induced caspase 3 activity and Bax protein expression and therefore lipotoxicity. Endogenous sfALR but not rhALR treatment lowered TAG levels, diminished activation of ER-stress mediators C-Jun N-terminal kinase (JNK), X-box binding protein-1 (XBP1) and proapoptotic transcription factor C/EBP-homologous protein (CHOP), and reduced death receptor 5 protein expression. Cellular ALR exerts its lipid lowering and anti-apoptotic actions by enhancing FABP1, which binds toxic FFA, increasing mitochondrial β-oxidation by elevating the mitochondrial FFA transporter CPT1α, and decreasing ELOVL6, which delivers toxic FFA metabolites. We found reduced hepatic mRNA levels of ALR in a high fat diet mouse model, and of ALR and FOXA2, a transcription factor inducing ALR expression, in human steatotic as well as NASH liver samples, which may explain increased lipid deposition and reduced β-oxidation in NASH patients. Present study shows that exogenous and endogenous ALR reduce PA induced lipoapoptosis. Furthermore, cytosolic sfALR changes mRNA and protein expression of genes regulating lipid metabolism, reduces ER-stress finally impeding progression of NASH.
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- 2017
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33. Inhibition of Innate Co-Receptor TREM-1 Signaling Reduces CD4+ T Cell Activation and Prolongs Cardiac Allograft Survival
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Schiechl, G., Brunner, S.M., Kesselring, R., Martin, M., Ruemmele, P., Mack, M., Hirt, S.W., Schlitt, H.J., Geissler, E.K., and Fichtner-Feigl, S.
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- 2013
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34. Genexpressionsanalyse zur Prognosevorhersage beim duktalen Pankreaskarzinom
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Grützmann, R., Wente, M., Niedergethmann, M., Friess, H., Bahra, M., Rümmele, P., Kristiansen, G., Winter, Ch., Saeger, H. D., Pilarsky, Ch., Buhr, H. J., editor, Hölscher, A., editor, Izbicki, J. R., editor, Jauch, K. W., editor, Post, S., editor, Allgayer, H., editor, Bartsch, D. K., editor, Fries, H., editor, Ghadimi, B. M., editor, Habermann, J. K., editor, Kalthoff, H., editor, Schackert, H. K., editor, Bruns, C. J., editor, Duda, D. N., editor, Fändrich, F., editor, Heberer, M., editor, Nüssler, A. K., editor, Stark, G. B., editor, Brückner, U. B., editor, Ertel, W., editor, Faist, E., editor, Heidecke, C. D., editor, Kalff, J. C., editor, Menger, M. D., editor, Schade, U. F., editor, Vollmar, B., editor, Bechstein, W. O., editor, Klar, E., editor, Klempnauer, J., editor, Minor, T., editor, Neuhaus, P., editor, Schmidt, J., editor, Langer, S., editor, Laschke, M. W., editor, Machens, H. G., editor, Steinau, H. U., editor, Südkamp, N., editor, Vogt, P., editor, Berger, D., editor, Klinge, U., editor, Schachtrupp, A., editor, Schilling, M. K., editor, Schumpelick, V., editor, Altendorf-Hofmann, A., editor, Bollschweiler, E., editor, Bruch, H. -P., editor, Lehnert, T., editor, Lorenz, W., editor, Neugebauer, E., editor, Ohmann, C., editor, Seiler, C. M., editor, Becker, H., editor, Betzler, M., editor, Bittner, R., editor, Broelsch, C., editor, Büchler, M. W., editor, Bumm, R., editor, Dralle, H., editor, Friess, H., editor, Frilling, A., editor, Germer, C. T., editor, Hopt, U., editor, Jonas, S., editor, Jost, J., editor, Markus, B., editor, Raab, H. R., editor, Reith, H. B., editor, Schlag, P. M., editor, Teichmann, W., editor, Uhl, W., editor, Wenisch, H., editor, and Zornig, C., editor
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- 2009
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35. Atypical Manifestation of LPS-Responsive beige- like anchor (LRBA) Deficiency Syndrome as an Autoimmune Endocrine Disorder without Enteropathy and Immunodeficiency.
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Shahrzad Bakhtiar, Eva Levy, Frank Ruemmele, Fabienne Chabrit-Henrion, Frédéric Rieux-Laucat, Nadine Cerf-Bensussan, Peter Bader, and Ulrich Paetow
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Stem Cell Transplantation ,autoimmune enteropathy ,autoimmune thyroiditis ,genotype-phenotype correlation ,Lipopolysaccharide responsive beige-like anchor (LRBA) gene ,Pediatrics ,RJ1-570 - Abstract
Monogenic primary immunodeficiency syndromes can affect one or more endocrine organs by autoimmunity during childhood. Clinical manifestations include type1 diabetes mellitus, hypothyroidism, adrenal insufficiency and vitiligo. LPS-responsive beige-like anchor protein (LRBA) deficiency was described in 2012 as a novel primary immunodeficiency, predominantly causing immune dysregulation and early onset enteropathy. We describe the heterogeneous clinical course of LRBA deficiency in two siblings, mimicking an autoimmune polyendocrine disorder in one of them in presence of the same underlying genetic mutation. The third child of consanguineous Egyptian parents (Patient 1) presented at six months of age with intractable enteropathy and failure to thrive. Later on he developed symptoms of adrenal insufficiency, autoimmune haemolytic anaemia, thrombocytopenia, and infectious complications due to immunosuppressive treatment. The severe enteropathy was non-responsive to the standard treatment and led to death at the age of 22 years. His younger sister (Patient 2) presented at the age of 12 to the endocrinology department with decompensated hypothyroidism, perioral vitiligo, delayed pubertal development, and growth failure without enteropathy and immunodeficiency.Using whole-exome sequencing (WES) we identified a homozygous frameshift mutation (c.6862delT, p.Y2288MfsX29) in the LRBA gene in both siblings. To our knowledge our patient (patient 2) is the first case of LRBA deficiency described with predominant endocrine phenotype without immunodeficiency and enteropathy. LRBA deficiency should be considered as underlying disease in pediatric patients presenting with autoimmune endocrine symptoms. The same genetic mutation can manifest with a broad phenotypic spectrum without genotype-phenotype correlation. The awareness for disease symptoms among non-immunologists might be a key to early diagnosis. Further functional studies in LRBA deficiency are necessary to provide detailed information on the origin of autoimmunity in order to develop reliable predictive biomarkers for affected patients.
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- 2016
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36. STAT5b as Molecular Target in Pancreatic Cancer—Inhibition of Tumor Growth, Angiogenesis, and Metastases
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Christian Moser, Petra Ruemmele, Sebastian Gehmert, Hedwig Schenk, Marina P Kreutz, Maria E Mycielska, Christina Hackl, Alexander Kroemer, Andreas A Schnitzbauer, Oliver Stoeltzing, Hans J Schlitt, Edward K Geissler, and Sven A Lang
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
The prognosis of patients suffering from pancreatic cancer is still poor and novel therapeutic options are urgently needed. Recently, the transcription factor signal transducer and activator of transcription 5b (STAT5b) was associated with tumor progression in human solid cancer. Hence, we assessed whether STAT5b might serve as an anticancer target in ductal pancreatic adenocarcinoma (DPAC). We found that nuclear expression of STAT5b can be detected in approximately 50% of DPAC. Blockade of STAT5b by stable shRNA-mediated knockdown showed no effects on tumor cell growth in vitro. However, inhibition of tumor cell motility was found even in response to stimulation with epidermal growth factor or interleukin-6. These findings were paralleled by a reduction of prometastatic and proangiogenic factors in vitro. Subsequent in vivo experiments revealed a strong growth inhibition on STAT5b blockade in subcutaneous and orthotopic models. These findings were paralleled by impaired tumor angiogenesis in vivo. In contrast to the subcutaneous model, the orthotopic model revealed a strong reduction of tumor cell proliferation that emphasizes the meaning of assessing targets in an appropriate microenvironment. Taken together, our results suggest that STAT5b might be a potential novel target for human DPAC.
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- 2012
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37. Endoscopic and histologic diagnosis of long- and short-Barrett's esophagus
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Endlicher, E., Ruemmele, P., Beer, S., Rath, H., Schlottmann, K., Grossmann, J., Schoelmerich, J., Messmann, Helmut, and Knuechel, R.
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- 2021
38. Clinical value of endoscopic ultrasound (EUS) in the early diagnosis of peritoneal carcinosis (PC) - a retrospective evaluation
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Goelder, Stefan K., Ruemmele, P., Anthuber, Matthias, Lock, G., Schlottmann, K., Kullmann, F., Schoelmerich, J., and Messmann, Helmut
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- 2021
39. Genetic characterization of congenital tufting enteropathy: epcam associated phenotype and involvement of SPINT2 in the syndromic form
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Salomon, Julie, Goulet, Olivier, Canioni, Danielle, Brousse, Nicole, Lemale, Julie, Tounian, Patrick, Coulomb, Aurore, Marinier, Evelyne, Hugot, Jean-Pierre, Ruemmele, Frank, Dufier, Jean-Louis, Roche, Olivier, Bodemer, Christine, Colomb, Virginie, Talbotec, Cécile, Lacaille, Florence, Campeotto, Florence, Cerf-Bensussan, Nadine, Janecke, Andreas R., Mueller, Thomas, Koletzko, Sibylle, Bonnefont, Jean-Paul, Lyonnet, Stanislas, Munnich, Arnold, Poirier, Françoise, and Smahi, Asma
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- 2014
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40. Paediatric Inflammatory Bowel Disease: A Multi-Stakeholder Perspective to Improve Development of Drugs for Children and Adolescents.
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Croft, Nicholas M, Ridder, Lissy de, Griffiths, Anne M, Hyams, Jeffrey S, Ruemmele, Frank M, Turner, Dan, Cheng, Katharine, Lutsar, Irja, Greco, Marco, Gołębiewska, Zuzanna, Laumond, Floriane, Cavaller-Bellaubi, Maria, Elgreey, Adam, Altepeter, Tara A, Pallidis, Chrissi, Norga, Koen, Nelson, Robert, Crandall, Wallace, and Vassal, Gilles
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Background and Aims Despite recent approvals for new drugs to treat adults with Crohn's disease or ulcerative colitis, there are only two approved advanced treatment options [infliximab and adalimumab] for children with inflammatory bowel disease [IBD]. There are many potential new therapies being developed for adult and paediatric IBD. Moreover, regulatory agencies in both the European Union and USA have processes in place to support the early planning and initiation of paediatric studies. Nevertheless, unacceptable delays in approvals for use of drugs in children persist, with an average 7-year gap, or longer, between authorization of new IBD drugs for adults and children. Methods A 2-day virtual meeting was held during April 14–15, 2021 for multi-stakeholders [clinical academics, patient community, pharmaceutical companies and regulators] to discuss their perspectives on paediatric drug development for IBD. Results The multi-stakeholder group presented, discussed and proposed actions to achieve expediting the approval of new drugs in development for paediatric IBD. Conclusions Collaborative action points for all stakeholders are required to make progress and facilitate new drug development for children with IBD. [ABSTRACT FROM AUTHOR]
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- 2023
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41. Ustekinumab Use in Pediatric Inflammatory Bowel Disease: A French Multicenter Study From the Pediatric GETAID
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Koudsi, Mounzer, Martinez-Vinson, Christine, Pigneur, Bénédicte, Willot, Stéphanie, Djamal, Djeddi, Enaud, Raphael, Rebeuh, Julie, Dupont, Claire, Dabadie, Alain, Bertrand, Valérie, Hugot, Jean-Pierre, Lachaux, Alain, Ruemmele, Franck, Viala, Jérôme, Duclaux-Loras, Rémi, and Pédiatrique, GETAID
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- 2023
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42. DOCK11 deficiency in patients with X-linked actinopathy and autoimmunity
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Boussard, Charlotte, Delage, Laure, Gajardo, Tania, Kauskot, Alexandre, Batignes, Maxime, Goudin, Nicolas, Stolzenberg, Marie-Claude, Brunaud, Camille, Panikulam, Patricia, Riller, Quentin, Moya-Nilges, Maryse, Solarz, Jean, Repérant, Christelle, Durel, Béatrice, Bordet, Jean-Claude, Pellé, Olivier, Lebreton, Corinne, Magérus, Aude, Pirabakaran, Vithura, Vargas, Pablo, Dupichaud, Sébastien, Jeanpierre, Marie, Vinit, Angélique, Zarhrate, Mohammed, Masson, Cécile, Aladjidi, Nathalie, Arkwright, Peter D., Bader-Meunier, Brigitte, Baron Joly, Sandrine, Benadiba, Joy, Bernard, Elise, Berrebi, Dominique, Bodemer, Christine, Castelle, Martin, Charbit-Henrion, Fabienne, Chbihi, Marwa, Debray, Agathe, Drabent, Philippe, Fraitag, Sylvie, Hié, Miguel, Landman-Parker, Judith, Lhermitte, Ludovic, Moshous, Despina, Rohrlich, Pierre, Ruemmele, Frank, Welfringer-Morin, Anne, Tusseau, Maud, Belot, Alexandre, Cerf-Bensussan, Nadine, Roelens, Marie, Picard, Capucine, Neven, Bénédicte, Fischer, Alain, Callebaut, Isabelle, Ménager, Mickaël, Sepulveda, Fernando E., Adam, Frédéric, and Rieux-Laucat, Frédéric
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•DOCK11 deficiency is a new X-linked immune-related actinopathy.•DOCK11 deficiency leads to impaired CDC42 activity, abnormal actin cytoskeleton remodeling, and immune dysregulation.
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- 2023
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43. Upregulation of TNF Receptor Type 2 in Human and Experimental Renal Allograft Rejection
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Hoffmann, U., Bergler, T., Rihm, M., Pace, C., Krüger, B., Rümmele, P., Stoelcker, B., Banas, B., Männel, D.N., and Krämer, B.K.
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- 2009
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44. Development, Validation, and Evaluation of the Pediatric Inflammatory Crohn's Magnetic Resonance Enterography Index From the ImageKids Study.
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Focht, Gili, Cytter-Kuint, Ruth, Greer, Mary-Louise C., Pratt, Li-Tal, Castro, Denise A., Church, Peter C., Walters, Thomas D., Hyams, Jeffrey, Navon, Dan, Martin de Carpi, Javier, Ruemmele, Frank, Russell, Richard K., Gavish, Matan, Griffiths, Anne M., and Turner, Dan
- Abstract
Cross-sectional imaging is important in the assessment of transmural inflammation in Crohn's disease (CD). Small bowel involvement is often more extensive in pediatric CD, requiring a panentering measuring tool. We undertook to develop a magnetic resonance enterography (MRE)-based index that would measure inflammation in all segments of the intestine, without rectal contrast. Children with CD underwent ileocolonoscopy and MRE and half were prospectively followed for 18 months when MRE was repeated. Item generation and reduction were performed by a Delphi panel of pediatric radiologists, a systematic literature review, a cross-sectional study of 48 MREs, and a steering committee. Formatting and weighting were performed using multivariate modeling adjusted by a steering committee. MREs were read locally and centrally. Reliability, validity, and responsiveness were determined using several clinimetric and psychometric approaches. Thirty items were initially generated and reduced to 5 using regression analysis on 159 MREs: wall thickness, wall diffusion weighted imaging, ulcerations, mesenteric edema, and comb sign. In the validation cohort of 81 MREs, the weighted global PICMI correlated well with the radiologist global assessment (r = 0.85; P <.001) and with the simple endoscopic score in a subsample with ileocolonic disease (r = 0.63; P <.001). Interobserver and test-retest reliability were high (interclass correlation coefficients, 0.84; 95% confidence interval [CI], 0.79–0.87; and 0.81, 95% CI, 0.65–0.90, respectively; both P <.001). Excellent responsiveness was found at repeated visits (n = 116 MREs; area under the receiver operating characteristic curve 0.96; 95% CI, 0.93–0.99). Transmural healing was defined as PICMI ≤10 and response as a change of >20 points with excellent discriminative validity (area under the receiver operating characteristic curve = 0.96; 95% CI, 0.93–0.99). The PICMI is a valid, reliable, and responsive index for assessing transmural inflammation in pediatric CD. It scores the entire bowel length and does not require intravenous contrast or rectal enema and, therefore, is suitable for use in children. (ClinicalTrials.gov , Number: NCT01881490.) [Display omitted] We have developed a validated score, called the Pediatric Inflammatory Crohn's Magnetic Resonance Enterography Index, which quantifies the degree of inflammation in the bowel of children with Crohn's disease, as measured using magnetic resonance imaging of the bowel. [ABSTRACT FROM AUTHOR]
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- 2022
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45. Causes of bolus impaction in the esophagus
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Kirchner, Gabriele I., Zuber-Jerger, Ina, Endlicher, Esther, Gelbmann, Cornelia, Ott, Claudia, Ruemmele, Petra, Schölmerich, Jürgen, and Klebl, Frank
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- 2011
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46. Prognosis according to histochemical analysis of liver metastases removed at liver resection: Pronóstico de las metástasis hepáticas extirpadas mediante resección de acuerdo con su análisis histoquímico
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Brunner, S. M., Kesselring, R., Rubner, C., Martin, M., Jeiter, T., Boerner, T., Ruemmele, P., Schlitt, H. J., and Fichtner-Feigl, S.
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- 2014
47. Adalimumab Therapy in Pediatric Crohn Disease
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Payen, Elise, Neuraz, Antoine, Zenzeri, Letizia, Talbotec, Cécile, Abi Nader, Elie, Chatenoud, Lucienne, Chhun, Stephanie, Goulet, Olivier, Ruemmele, Frank M., and Pigneur, Bénédicte
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European Crohn’s Colitis Organization (ECCO) and the European Society of Pediatric Gastroenterology, Hepatology and Nutrition (ESPGHAN) guidelines recommend the early use of anti-tumor necrosis factor (TNF) biologicals in pediatric Crohn disease (CD) patients with positive predictors for poor outcome. The objective of the present study was to compare early “Top-Down” use of adalimumab (ADA) immunomodulator/biologics-naive patients to conventional “Step-Up” management. One hundred and twenty consecutive patients with a confirmed diagnosis of CD and treated with ADA between 2008 and 2019 were included and allocated to the ADA-Top Down (n = 59) or ADA-Step Up group (n = 61). The primary endpoint was prolonged steroid-/enteral nutrition-free clinical remission at 24 months, defined by a weighted Pediatric Crohn’s Disease Activity Index (wPCDAI) < 12.5. Clinical and biological data were collected at 12 and 24 months. At start of ADA, disease activity was comparable between the ADA-Top Down group and the ADA-Step Up group (wPCDAI = 31?±?16 vs 31.3?±?15.2, respectively, P= 0.84). At 24 months, the remission rate was significantly higher in the ADA-Top Down group (73% vs 51%, P< 0.01). After propensity score, the Top-Down strategy is still more effective than the Step-Up strategy in maintaining remission at 24 months [hazard ratio (HR) = 0.36, 95% CI (0.15–0.87), P= 0.02]. Patients in the ADA-Top Down group were mainly on monotherapy compared to patients in the ADA-Step Up group (53/55 vs 28/55 respectively, P< 0.001). Serum levels of ADA were higher in the ADA-Top Down group than in the ADA-Step Up group (12.8?±?4.3 vs 10.4?±?3.9 µg/mL, respectively, P< 0.01). There were no serious adverse events. Early use of ADA appears to be more effective in maintaining relapse-free remission at 2 years, while using it as monotherapy. These findings further favor the recommendation of early anti-TNF use in high-risk CD patients.
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- 2023
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48. XBP1 Activation Reduces Severity of Polycystic Kidney Disease due to a Nontruncating Polycystin-1Mutation in Mice
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Krappitz, Matteus, Bhardwaj, Rishi, Dong, Ke, Staudner, Tobias, Yilmaz, Duygu Elif, Pioppini, Carlotta, Westergerling, Parisa, Ruemmele, David, Hollmann, Till, Nguyen, Thuy Anh, Cai, Yiqiang, Gallagher, Anna-Rachel, Somlo, Stefan, and Fedeles, Sorin
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XBP1 activation in neonatal and adult doxycycline-inducible murine models of ADPKD due to a hypomorphic polycystin-1 missense mutation orthologous to human PC1R2220W delays cyst formation. Activating XBP1s, a pro-chaperone inducer of the endoplasmic reticulum stress response, can improve steady-state expression, ciliary trafficking, and cleavage of the mutant protein, providing initial in vivoproof of concept that modulating levels of poorly functioning hypomorphic PC1 alleles can slow progression of kidney cyst formation in ADPKD.
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- 2023
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49. GATA4 and GATA6 loss-of-expression is associated with extinction of the classical programme and poor outcome in pancreatic ductal adenocarcinoma
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de Andrés, Mónica P, Jackson, Richard J, Felipe, Irene, Zagorac, Sladjana, Pilarsky, Christian, Schlitter, Anna Melissa, Martinez de Villareal, Jaime, Jang, Gun Ho, Costello, Eithne, Gallinger, Steve, Ghaneh, Paula, Greenhalf, William, Kno¨sel, Thomas, Palmer, Daniel H, Ruemmele, Petra, Weichert, Wilko, Buechler, Markus, Hackert, Thilo, Neoptolemos, John P, Notta, Faiyaz, Malats, Núria, Martinelli, Paola, and Real, Francisco X
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ObjectiveGATA6 is a key regulator of the classical phenotype in pancreatic ductal adenocarcinoma (PDAC). Low GATA6 expression associates with poor patient outcome. GATA4is the second most expressed GATA factor in the pancreas. We assessed whether, and how, GATA4 contributes to PDAC phenotype and analysed the association of expression with outcome and response to chemotherapy.DesignWe analysed PDAC transcriptomic data, stratifying cases according to GATA4and GATA6expression and identified differentially expressed genes and pathways. The genome-wide distribution of GATA4 was assessed, as well as the effects of GATA4knockdown. A multicentre tissue microarray study to assess GATA4 and GATA6 expression in samples (n=745) from patients with resectable was performed. GATA4 and GATA6 levels were dichotomised into high/low categorical variables; association with outcome was assessed using univariable and multivariable Cox regression models.ResultsGATA4messenger RNA is enriched in classical, compared with basal-like tumours. We classified samples in 4 groups as high/low for GATA4and GATA6. Reduced expression of GATA4had a minor transcriptional impact but low expression of GATA4enhanced the effects of GATA6low expression. GATA4 and GATA6 display a partially overlapping genome-wide distribution, mainly at promoters. Reduced expression of both proteins in tumours was associated with the worst patient survival. GATA4and GATA6expression significantly decreased in metastases and negatively correlated with basal markers.ConclusionsGATA4and GATA6cooperate to maintain the classical phenotype. Our findings provide compelling rationale to assess their expression as biomarkers of poor prognosis and therapeutic response.
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- 2023
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50. Specific IgG response against Mycobacterium avium paratuberculosis in children and adults with Crohn's disease.
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Julien Verdier, Louis Deroche, Matthieu Allez, Caroline Loy, Franck Biet, Christelle C Bodier, Sylvie Bay, Christelle Ganneau, Tamara Matysiak-Budnik, Jean Marc Reyrat, Martine Heyman, Nadine Cerf-Bensussan, Frank M Ruemmele, and Sandrine Ménard
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Medicine ,Science - Abstract
Background and aimsPresence of serum antibodies against Mycobacterium avium paratuberculosis (MAP) in Crohn's Disease (CD) as a disease characteristic remains controversial. In the present work, we assessed antibody reactivity of serum and intestinal fluid against four distinct MAP-antigens, including the recently identified MAP-specific lipopentapeptide (L5P).MethodsImmunoglobulin concentrations and specificity against 3 non MAP-specific antigens: glycosyl-transferase-d (GSD), purified protein derivative from MAP (Johnin-PPD), heparin binding haemagglutinin (MAP-HBHA) and one MAP-specific antigen: synthetic L5P were determined by ELISA in gut lavage fluids from adult controls or patients with CD, and in sera of children or adult controls or patients with CD, ulcerative colitis or celiac disease.ResultsTotal IgA and IgG concentrations were increased in sera of children with CD but were decreased in sera of adults with CD, thereof specificity against MAP antigens was assessed by normalizing immunoglobulin concentrations between samples. In CD patients, IgG reactivity was increased against the four MAP antigens, including L5P in gut lavage fluids but it was only increased against L5P in sera. By contrast, anti-L5P IgG were not increased in patients with ulcerative colitis or celiac disease.ConclusionsA significant increase in anti-L5P IgG is observed in sera of children and adults with CD but not in patients with other intestinal inflammatory diseases. Anti-L5P antibodies may serve as serological marker for CD.
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- 2013
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