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A cryo scanning transmission X-ray microscope, the cryo-STXM, has been designed and commissioned at the Canadian Light Source synchrotron. The instrument is designed to operate from 100 - 4000 eV (lambda = 12.4 - 0.31 nm). Users can insert a previously frozen sample, through a load lock, and rotate it plus minus 70 degrees in the beam to collect tomographic data sets. The sample can be maintained for extended periods at 92 K primarily to suppress radiation damage, and a pressure on the order of 10-9 Torr to suppress sample contamination. The achieved spatial resolution (30 nm) and spectral resolution (0.1 eV) are similar to other current soft X-ray STXMs, as demonstrated by measurements on known samples and test patterns. The data acquisition efficiency is significantly more favorable for both imaging and tomography. 2D images, 3D tomograms and 4D chemical maps of automotive hydrogen fuel cell thin sections are presented to demonstrate current performance and new capabilities, namely cryo-spectrotomography in the soft X-ray region., 56 pages

A new scanning transmission X-ray microscope (STXM) optimized for cryo-spectro-tomography with soft X-rays has been designed, built and commissioned at Canadian Light Source (CLS) beamline 10ID1 (130-2700 eV). It is controlled via a new python-based software package, pySTXM. A liquid N2 goniometer (Gatan 630, -80° to 80°), mounted on a computer controlled (x,y,Theta) tilt stage allows for spectro-tomographic measurements at cryogenic temperatures (-180°C) which reduces radiation damage. The CLS cryo-STXM is unique among the set of soft X-ray STXMs currently installed around the world. Details of the cryo-STXM design and examples of its performance will be presented.

Beamline 08B1-1 is a recently commissioned bending-magnet beamline at the Canadian Light Source. The beamline is designed for automation and remote access. Together with the undulator-based beamline 08ID-1, they constitute the Canadian Macromolecular Crystallography Facility. This paper describes the design, specifications, hardware and software of beamline 08B1-1. A few scientific results using data obtained at the beamline will be highlighted.

An integrated computer software system for on-site and remote collection of macromolecular crystallography (MX) data at the Canadian Light Source (CLS) is described. The system consists of an integrated graphical user interface for data collection and beamline control [MX Data Collector (MxDC)] which provides experiment-focused control of beamline devices, and a laboratory information management system [MX Laboratory Information Virtual Environment (MxLIVE)] for managing sample and experiment information through a web browser. The system allows remote planning and transmission of sample and experiment parameters to the beamline through MxLIVE, on-site or remote data collection through MxDC guided by information from MxLIVE, and remote monitoring and download of experimental results through MxLIVE. The system is deployed and in use on both MX beamlines at the CLS which constitute the Canadian Macromolecular Crystallography Facility.

The Canadian light source is a 2.9 GeV national synchrotron radiation facility located on the University of Saskatchewan campus in Saskatoon. The small-gap in-vacuum undulator illuminated beamline, 08ID-1, together with the bending magnet beamline, 08B1-1, constitute the Canadian Macromolecular Crystallography Facility (CMCF). The CMCF provides service to more than 50 Principal Investigators in Canada and the United States. Up to 25% of the beam time is devoted to commercial users and the general user program is guaranteed up to 55% of the useful beam time through a peer-review process. CMCF staff provides "Mail-In" crystallography service to users with the highest scored proposals. Both beamlines are equipped with very robust end-stations including on-axis visualization systems, Rayonix 300 CCD series detectors and Stanford-type robotic sample auto-mounters. MxDC, an in-house developed beamline control system, is integrated with a data processing module, AutoProcess, allowing full automation of data collection and data processing with minimal human intervention. Sample management and remote monitoring of experiments is enabled through interaction with a Laboratory Information Management System developed at the facility.

A new soft X-ray scanning transmission X-ray microscope (STXM) optimized for cryo spectro-tomography was designed and commissioned at the Canadian Light Source (CLS). The instrument was required to achieve ultra high vacuum and be compatible with in-situ plasma cleaning. It also required a scintillator detector, and the design of this detector had to evolve to meet these environmental requirements. The scintillator deposition technique, and the suppression of background by introduction of an edge filter are also presented.

Beamline 08ID-1 is the prime macromolecular crystallography beamline at the Canadian Light Source. Based on a small-gap in-vacuum undulator, it is designed for challenging projects like small crystals and crystals with large cell dimensions. Beamline 08ID-1, together with a second bending-magnet beamline, constitute the Canadian Macromolecular Crystallography Facility (CMCF). This paper presents an overall description of the 08ID-1 beamline, including its specifications, beamline software and recent scientific highlights. The end-station of the beamline is equipped with a CCD X-ray detector, on-axis crystal visualization system, a single-axis goniometer and a sample automounter allowing remote access to the beamline. The general user program is guaranteed up to 55% of the useful beam time and is run under a peer-review proposal system. The CMCF staff provide `Mail-in' crystallography service to the users with the highest-scored proposals.

The Canadian Macromolecular Crystallography Facility (CMCF) 08ID-1 beamline at the Canadian Light Source (CLS) is in the later stages of commissioning. The photon source is a small-gap in-vacuum undulator (SGU), which was designed in-house with a support structure and vacuum chamber from RMP of Italy. The undulator magnets were shimmed at the CLS and the SGU was installed in the 2.9 GeV storage ring. The storage ring has had currents up to 300 mA safely injected and stored since its first light in the diagnostic beamline in December of 2003. At these storage ring currents, the 7th harmonic of the SGU will yield a photon flux on the sample at the endstation on the order of ∼ 5 × 10 12 at 12 keV. The overall design of the beamline includes white beam slits, indirectly cryo-cooled first crystal of the DCM and sagittally focusing second crystal, and vertically focussing ULE mirror. The endstation of the beamline is innovative and robust, and was manufactured by ACCEL according to CLS specifications. The beamline controls, are being developed based on EPICS, and complemented with a user-friendly interface. The scientific goal of the 08ID-1 beamline is to operate a protein crystallography MAD beamline suitable for studying small crystals and crystals with large unit cells.