68 results on '"Sébastien Baud"'
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2. El arte de ver. Chamanismo y búsqueda visionaria en los awajún (Perú)
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Sébastien Baud
- Subjects
Awajun ,Shamanism ,construction of person ,Psychotropic plants ,Latin America. Spanish America ,F1201-3799 ,Social sciences (General) ,H1-99 - Abstract
In this paper, I address the processes of constructing person and the acquisition of a new soul in the Awajun society (Jivaro linguistic family, Peru). This is based on psychotropic plants —tobacco, angel trumpet, ayahuasca and chagropanga—, the words and discourses about them as well as the implicit logics. On the other hand, it involves shamanism and vision quest. We will realize that these respective logics have different meanings to different people (common people or shaman): they are both opposite and complementary. Opposite, since the vision quest assumes a purge and a spiritual experience to be “clean, beautiful, adorned” and to have a life of plenty while shamanic practice requires a contamination to be prickly and to be able to gain access to the invisible. These perspectives are complementary, since the shamanic practice protects the individual from magical aggression or witchcraft during the vision quest.
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- 2019
- Full Text
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3. Acyl–Acyl Carrier Protein Desaturases and Plant Biotic Interactions
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Sami Kazaz, Romane Miray, and Sébastien Baud
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acyl–acyl carrier protein desaturase ,fatty acid ,monounsaturated ,plant ,biotic interactions ,Cytology ,QH573-671 - Abstract
Interactions between land plants and other organisms such as pathogens, pollinators, or symbionts usually involve a variety of specialized effectors participating in complex cross-talks between organisms. Fatty acids and their lipid derivatives play important roles in these biological interactions. While the transcriptional regulation of genes encoding acyl–acyl carrier protein (ACP) desaturases appears to be largely responsive to biotic stress, the different monounsaturated fatty acids produced by these enzymes were shown to take active part in plant biotic interactions and were assigned with specific functions intrinsically linked to the position of the carbon–carbon double bond within their acyl chain. For example, oleic acid, an omega-9 monounsaturated fatty acid produced by Δ9-stearoyl–ACP desaturases, participates in signal transduction pathways affecting plant immunity against pathogen infection. Myristoleic acid, an omega-5 monounsaturated fatty acid produced by Δ9-myristoyl–ACP desaturases, serves as a precursor for the biosynthesis of omega-5 anacardic acids that are active biocides against pests. Finally, different types of monounsaturated fatty acids synthesized in the labellum of orchids are used for the production of a variety of alkenes participating in the chemistry of sexual deception, hence favoring plant pollination by hymenopterans.
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- 2021
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4. Overexpression of MYB115, AAD2, or AAD3 in Arabidopsis thaliana seeds yields contrasting omega-7 contents.
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Hasna Ettaki, Manuel Adrián Troncoso-Ponce, Alexandra To, Guillaume Barthole, Loïc Lepiniec, and Sébastien Baud
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Medicine ,Science - Abstract
Omega-7 monoenoic fatty acids (ω-7 FAs) are increasingly exploited both for their positive effects on health and for their industrial potential. Some plant species produce fruits or seeds with high amounts of ω-7 FAs. However, the low yields and poor agronomic properties of these plants preclude their commercial use. As an alternative, the metabolic engineering of oilseed crops for sustainable ω-7 FA production has been proposed. Two palmitoyl-ACP desaturases (PADs) catalyzing ω-7 FA biosynthesis were recently identified and characterized in Arabidopsis thaliana, together with MYB115 and MYB118, two transcription factors that positively control the expression of the corresponding PAD genes. In the present research, we examine the biotechnological potential of these new actors of ω-7 metabolism for the metabolic engineering of plant-based production of ω-7 FAs. We placed the PAD and MYB115 coding sequences under the control of a promoter strongly induced in seeds and evaluated these different constructs in A. thaliana. Seeds were obtained that exhibit ω-7 FA contents ranging from 10 to >50% of the total FAs, and these major compositional changes have no detrimental effect on seed germination.
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- 2018
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5. Retour sur les luttes territoriales awajun
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Sébastien Baud
- Subjects
territory ,Peru ,65459 ,indigenous peoples’ struggles ,extractivism ,Anthropology ,GN1-890 ,Latin America. Spanish America ,F1201-3799 - Abstract
Within the Amerindian territories of Amazonian Piedmont (Peru), commercial exploitation of wood and extractivism are causing an increase of economical and/or cultural conflicts. June 5th, 2009 is an important date for Awajun (jivaro linguistic family), settled on High Marañón river. It refers to a brutal repression of native people protest movements (against news laws) by the armed peruvian forces close to Bagua. In the absence of feedback from the peruvian State regarding their requests of the use and free disposal of their lands, some indigenous organizations try to create a “integral territory”. This project is a response on the fact that awajun society, their environment and their decision making are limited by the political existence of an indigenous territory and are influenced by external actors (peruvian State and extractivism private companies). It highlighted how the cultural roots are actually defined by political choice. In this paper, I want to go back to the recent history of awajun political struggles, and then I ask the idea of cultural roots.
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- 2016
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6. Function and localization of the Arabidopsis thaliana diacylglycerol acyltransferase DGAT2 expressed in yeast.
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Laure Aymé, Sébastien Baud, Bertrand Dubreucq, Florent Joffre, and Thierry Chardot
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Medicine ,Science - Abstract
Diacylglycerol acyltransferases (DGATs) catalyze the final and only committed step of triacylglycerol synthesis. DGAT activity is rate limiting for triacylglycerol accumulation in mammals, plants and microbes. DGATs belong to three different evolutionary classes. In Arabidopsis thaliana, DGAT1, encoded by At2g19450, is the major DGAT enzyme involved in triacylglycerol accumulation in seeds. Until recently, the function of DGAT2 (At3g51520) has remained elusive. Previous attempts to characterize its enzymatic function by heterologous expression in yeast were unsuccessful. In the present report we demonstrate that expression of a codon-optimized version of the DGAT2 gene is able to restore neutral lipid accumulation in the Saccharomyces cerevisiae mutant strain (H1246), which is defective in triacylglycerol biosynthesis. Heterologous expression of codon-optimized DGAT2 and DGAT1 induced the biogenesis of subcellular lipid droplets containing triacylglycerols and squalene. Both DGAT proteins were found to be associated with these lipid droplets. The fatty acid composition was affected by the nature of the acyltransferase expressed. DGAT2 preferentially incorporated C16:1 fatty acids whereas DGAT1 displayed preference for C16:0, strongly suggesting that these enzymes have contrasting substrate specificities.
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- 2014
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7. Recent progress in molecular genetics and omics-driven research in seed biology
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Sébastien Baud, Massimiliano Corso, Isabelle Debeaujon, Bertrand Dubreucq, Dominique Job, Annie Marion-Poll, Martine Miquel, Helen North, Loïc Rajjou, and Loïc Lepiniec
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General Medicine - Published
- 2023
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8. De quelques pharmakôn awajun (Pérou) et de leurs usages
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Sébastien Baud
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General Medicine - Published
- 2022
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9. AtMYB92 enhances fatty acid synthesis and suberin deposition in leaves of Nicotiana benthamiana
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Loïc Lepiniec, Sami Kazaz, Jean Thueux, Jérôme Joubès, Sébastien Baud, Alexandra To, Institut Jean-Pierre Bourgin (IJPB), AgroParisTech-Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Laboratoire de biogenèse membranaire (LBM), Université Bordeaux Segalen - Bordeaux 2-Centre National de la Recherche Scientifique (CNRS), IJPB's Plant Observatory technological platforms, ANR-10-GENM-0009,SOLAR,Développer et tester de nouveaux outils biotechnologiques pour accroître la teneur en huile de la graine : une clé pour la production de chaînes hydrocarbonées chez les oléagineux.(2010), ANR-17-EURE-0007,SPS-GSR,Ecole Universitaire de Recherche de Sciences des Plantes de Paris-Saclay(2017), Institut des sciences du végétal (ISV), Centre National de la Recherche Scientifique (CNRS), Unité associée au Département Biologie et Amélioration des Plantes (Associée BAP), Institut National de la Recherche Agronomique (INRA), and Institut National de la Recherche Agronomique (INRA)-AgroParisTech
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0106 biological sciences ,0301 basic medicine ,[SDV]Life Sciences [q-bio] ,Arabidopsis ,Nicotiana benthamiana ,Plant Science ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,MYB92 ,suberin ,Suberin ,Tobacco ,Genetics ,MYB ,Transcription factor ,ComputingMilieux_MISCELLANEOUS ,transcription factor ,Fatty acid synthesis ,Plant Proteins ,chemistry.chemical_classification ,biology ,Arabidopsis Proteins ,Activator (genetics) ,Fatty Acids ,Fatty acid ,Lipid metabolism ,Cell Biology ,Plants, Genetically Modified ,biology.organism_classification ,Lipids ,Plant Leaves ,030104 developmental biology ,chemistry ,Biochemistry ,fatty acid ,Transcription Factors ,010606 plant biology & botany - Abstract
International audience; Acyl lipids are important constituents of the plant cell. Depending on the cell type, requirements in acyl lipids vary greatly, implying a tight regulation of fatty acid and lipid metabolism. The discovery of the WRINKLED1 (WRI1) transcription factors, members of the AP2-EREBP (APETALA2-ethylene-responsive element binding protein) family, has emphasized the importance of transcriptional regulation for adapting the rate of acyl chain production to cell requirements. Here, we describe the identification of another activator of the fatty acid biosynthetic pathway, the Arabidopsis MYB92 transcription factor. This MYB and all the members of the subgroups S10 and S24 of MYB transcription factors can directly activate the promoter of BCCP2 that encodes a component of the fatty acid biosynthetic pathway. Two adjacent MYB cis-regulatory elements are essential for the binding and activation of the BCCP2 promoter by MYB92. Overexpression of MYB92 or WRI1 in Nicotiana benthamiana induces the expression of fatty acid biosynthetic genes but results in the accumulation of different types of acyl lipids. In the presence of WRI1, triacylglycerol biosynthetic enzymes coded by constitutively expressed genes efficiently channel the excess fatty acids toward reserve lipid accumulation. By contrast, MYB92 activates both fatty acid and suberin biosynthetic genes; hence, the remarkable increase in suberin monomers measured in leaves expressing MYB92. These results provide additional insight into the molecular mechanisms that control the biosynthesis of an important cell wall-associated acylglycerol polymer playing critical roles in plants.
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- 2020
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10. Differential Activation of Partially Redundant Δ9 Stearoyl-ACP Desaturase Genes Is Critical for Omega-9 Monounsaturated Fatty Acid Biosynthesis During Seed Development in Arabidopsis
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Delphine De Vos, Guillaume Barthole, Damien Vasselon, Sami Kazaz, Hasna Ettaki, Alexandra To, Loïc Lepiniec, Sébastien Baud, Frédéric Domergue, Katia Belcram, Institut national de la recherche agronomique [Maroc] (INRA Maroc), Institut Jean-Pierre Bourgin (IJPB), AgroParisTech-Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Laboratoire de biogenèse membranaire (LBM), Université Bordeaux Segalen - Bordeaux 2-Centre National de la Recherche Scientifique (CNRS), ANR-10-GENM-0009,SOLAR,Développer et tester de nouveaux outils biotechnologiques pour accroître la teneur en huile de la graine : une clé pour la production de chaînes hydrocarbonées chez les oléagineux.(2010), and ANR-17-EURE-0007,SPS-GSR,Ecole Universitaire de Recherche de Sciences des Plantes de Paris-Saclay(2017)
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Fatty Acid Desaturases ,0106 biological sciences ,[SDV]Life Sciences [q-bio] ,Mutant ,Arabidopsis ,Plant Science ,01 natural sciences ,In Brief ,Mixed Function Oxygenases ,Endosperm ,Fatty Acids, Monounsaturated ,03 medical and health sciences ,chemistry.chemical_compound ,Gene Expression Regulation, Plant ,Arabidopsis thaliana ,Gene ,Research Articles ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,biology ,Arabidopsis Proteins ,food and beverages ,Fatty acid ,Embryo ,Cell Biology ,Plants, Genetically Modified ,biology.organism_classification ,Lipids ,Cell biology ,Oleic acid ,chemistry ,Mutation ,Seeds ,lipids (amino acids, peptides, and proteins) ,Transcription Factors ,010606 plant biology & botany - Abstract
The spatiotemporal pattern of deposition, final amount, and relative abundance of oleic acid (cis-ω-9 C18:1) and its derivatives in the different lipid fractions of the seed of Arabidopsis (Arabidopsis thaliana) indicates that omega-9 monoenes are synthesized at high rates in this organ. Accordingly, we observed that four Δ9 stearoyl-ACP desaturase (SAD)-coding genes (FATTY ACID BIOSYNTHESIS2 [FAB2], ACYL-ACYL CARRIER PROTEIN5 [AAD5], AAD1, and AAD6) are transcriptionally induced in seeds. We established that the three most highly expressed ones are directly activated by the WRINKLED1 transcription factor. We characterized a collection of 30 simple, double, triple, and quadruple mutants affected in SAD-coding genes and thereby revealed the functions of these desaturases throughout seed development. Production of oleic acid by FAB2 and AAD5 appears to be critical at the onset of embryo morphogenesis. Double homozygous plants from crossing fab2 and aad5 could never be obtained, and further investigations revealed that the double mutation results in the arrest of embryo development before the globular stage. During later stages of seed development, these two SADs, together with AAD1, participate in the elaboration of the embryonic cuticle, a barrier essential for embryo–endosperm separation during the phase of invasive embryo growth through the endosperm. This study also demonstrates that the four desaturases redundantly contribute to storage lipid production during the maturation phase.
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- 2020
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11. Plant monounsaturated fatty acids: Diversity, biosynthesis, functions and uses
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Loïc Lepiniec, Romane Miray, Sami Kazaz, and Sébastien Baud
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Fatty Acid Desaturases ,chemistry.chemical_classification ,Degree of unsaturation ,Fatty Acids ,Fatty acid ,Cell Biology ,Plants ,Biochemistry ,Fatty Acids, Monounsaturated ,chemistry.chemical_compound ,Enzyme ,chemistry ,Biosynthesis ,Acyl chain ,Seeds ,Plant Oils - Abstract
Monounsaturated fatty acids are straight-chain aliphatic monocarboxylic acids comprising a unique carbon‑carbon double bond, also termed unsaturation. More than 50 distinct molecular structures have been described in the plant kingdom, and more remain to be discovered. The evolution of land plants has apparently resulted in the convergent evolution of non-homologous enzymes catalyzing the dehydrogenation of saturated acyl chain substrates in a chemo-, regio- and stereoselective manner. Contrasted enzymatic characteristics and different subcellular localizations of these desaturases account for the diversity of existing fatty acid structures. Interestingly, the location and geometrical configuration of the unsaturation confer specific characteristics to these molecules found in a variety of membrane, storage, and surface lipids. An ongoing research effort aimed at exploring the links existing between fatty acid structures and their biological functions has already unraveled the importance of several monounsaturated fatty acids in various physiological and developmental contexts. What is more, the monounsaturated acyl chains found in the oils of seeds and fruits are widely and increasingly used in the food and chemical industries due to the physicochemical properties inherent in their structures. Breeders and plant biotechnologists therefore develop new crops with high monounsaturated contents for various agro-industrial purposes.
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- 2022
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12. Réappropriations mutuelles. Ayahuasca et néochamanisme péruvien internationalisé
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Sébastien Baud
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Social Sciences and Humanities ,néochamanismes ,nuevas espiritualidades ,nouvelles spiritualités ,neo-shamanism ,General Mathematics ,(neo) chamanismos ,Perú ,03 medical and health sciences ,Awajun (fam. ling. jivaro) ,Peru ,0601 history and archaeology ,Awajun ,journey ,060101 anthropology ,030505 public health ,new age ,appropriations ,Applied Mathematics ,réappropriations ,06 humanities and the arts ,voyage ,reapropiaciones ,Pérou ,tourism ,Sciences Humaines et Sociales ,awajun (fam. ling. jíbaro) ,0305 other medical science ,viaje ,ayahuasca - Abstract
Dans cet article, je présente et analyse le paysage chamanique péruvien internationalisé et façonné par ce que j’appelle des « réappropriations chamaniques ». Ces dernières sont le fruit de rencontres entre nouvelles spiritualités européennes, sud et nord-américaines et néochamanismes locaux, entre celles et ceux qui voyagent à la rencontre de leurs chamanes et ces derniers. Ce paysage en devenir est attesté depuis une époque ancienne – je ne me hasarderai pas ici à donner une date –, comme en témoigne la circulation de plantes rituelles, médicinales et psychotropes et des noms qui les désignent. Autrement dit, ce que d’aucuns appellent le « tourisme chamanique » n’est pas à l’origine, mais participe d’un processus diffus. Pour le montrer, j’appuie mon propos sur une description de l’ayahuasca, cette plante psychotrope emblématique de ce paysage, puis celle du chamanisme awajun (famille linguistique jivaro, Pérou), peu familier, comparativement à d’autres, des « festivals chamaniques » et autres rituels « bricolés » organisés en Amérique ou en Europe. Enfin, j’aborde la rencontre et son intelligence, à travers un essai de compréhension de ce qui se joue dans l’expérience psychotrope des « modernes »., In this paper, I analyze the internationalized Peruvian shamanic landscape, a landscape shaped today by what I call “neo-shamanic appropriations”. These are the result of meetings between new age and local shamanisms, between European, South and North American travelers and shamans. However, the Peruvian shamanic landscape is older–I wouldn’t want to make an estimate–as evidenced by the sharing of ritual, medicinal and psychotropic plants, and the names of those plants. In other words, the so-called “shamanic tourism” does not cause but contribute to a diffuse process. To show this, I support my analysis with the following descriptions: first, a psychotropic plant (ayahuasca) and its usages; second, the Awajun shamanism (Jivaro linguistic family, Peru); third, the shamanic festivals and other unusual rituals organized in America or Europe. Finally, I discuss the encounter and its intelligence, through the understanding of what is playing out in modern psychoactive experiences., En este artículo analizo el paisaje chamánico peruano, internacionalizado y modelado por lo que llamo « reapropiaciones chamánicas ». Estas últimas son hoy día fruto del encuentro entre nuevas espiritualidades europeas, sur y norteamericanas y (neo) chamanismos locales, entre viajeros y chamanes. Sin embargo, hay testimonios de este paisaje en devenir desde una época antigua – no me arriesgaré aquí a dar una fecha –, como lo demuestra la circulación en Suramérica de plantas rituales, medicinales y psicotrópicas y los nombres con las que se las designa. Dicho de otra manera, lo que algunos llaman « el turismo chamánico » no está en el origen, sino que participa de un proceso difuso. Para demostrarlo, apoyo mis afirmaciones en una descripción de la ayahuasca, planta psicotrópica emblemática de este paisaje ; del chamanismo awajun (familia lingüística jíbaro, Perú) ; y de « festivales chamánicos » y otros rituales « montados » que se organizan en América o en Europa. Finalmente, me refiero al encuentro y su inteligencia, a través de un ensayo de comprensión de lo que ocurre en la experiencia psicotrópica de los « modernos ».
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- 2017
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13. The art of seeing: Shamanism and the Visionary Search among the Awajun (Peru)
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Sébastien Baud, Institut Français d'Etudes Andines (IFEA), Ministère de l'Europe et des Affaires étrangères (MEAE)-Centre National de la Recherche Scientifique (CNRS), and Université de Neuchâtel (UNINE)
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lcsh:Latin America. Spanish America ,awajún ,construction of person ,lcsh:F1201-3799 ,plantes psychotropes ,chamanisme ,Shamanism ,Psychotropic plants ,[SHS.ANTHRO-SE]Humanities and Social Sciences/Social Anthropology and ethnology ,construcción de la persona ,plantas psicoactivas ,construction de la personne ,General Earth and Planetary Sciences ,lcsh:H1-99 ,lcsh:Social sciences (General) ,chamanismo ,Awajun ,General Environmental Science - Abstract
International audience; In this paper, I address the processes of constructing person and the acquisition of a new soul in the Awajun society (Jivaro linguistic family, Peru). This is based on psychotropic plants —tobacco, angel trumpet, ayahuasca and chagropanga—, the words and discourses about them as well as the implicit logics. On the other hand, it involves shamanism and vision quest. We will realize that these respective logics have different meanings to different people (common people or shaman): they are both opposite and complementary. Opposite, since the vision quest assumes a purge and a spiritual experience to be “clean, beautiful, adorned” and to have a life of plenty while shamanic practice requires a contamination to be prickly and to be able to gain access to the invisible. These perspectives are complementary, since the shamanic practice protects the individual from magical aggression or witchcraft during the vision quest.; En este artículo analizamos los procesos de construcción de la persona y la adquisición de una nueva vitalidad en la sociedad awajún (familia lingüística jíbaro, Perú). Nos basamos, por un lado, en el análisis del uso de plantas psicoactivas —tabaco, floripondio, ayahuasca y chagropanga—, de términos y palabras sobre ellas y de las lógicas en juego, y, por otro lado, en una categorización antropológica, que distingue búsqueda visionaria y chamanismo, pertinente a tal contexto. Así, nos daremos cuenta de que dichas lógicas, diferentes según las personas (cualquiera o chamán), son simultáneamente opuestas y complementarias. Opuestas porque la búsqueda visionaria supone una limpieza y un encuentro espiritual para ser «limpio, hermoso, adornado» y tener abundancia material, pues la actuación chamánica implica ensuciarse deliberadamente para ser «picante» y acceder, protegido, a lo invisible. Complementarias porque la segunda tiene como función preservar lo que ha sido adquirido con la primera de toda agresión mágica o brujería. Finalmente, este artículo trata de contribuir al esfuerzo de valorización de materiales originales en un momento en el que el chamanismo se presta a interpretaciones sumamente diversas.; Je traite dans cet article des processus de construction de la personne et de l’acquisition d’une vitalité nouvelle dans la société awajun (famille linguistique jivaro, Pérou). Je m’appuie pour ce faire d’une part sur une analyse des usages de quelques plantes psychotropes —tabac, trompette des anges, ayahuasca et chagropanga—, des termes et discours à leur propos et des logiques en jeu; et d’autre part sur une nécessaire catégorisation anthropologique, qui considère séparément quête visionnaire et chamanisme, pertinente à mon sens dans ce contexte culturel. Nous verrons ainsi que les logiques en jeu diffèrent selon les personnes —tout un chacun ou chamane— et qu’elles sont tout à la fois opposées et complémentaires. Opposées, car la quête visionnaire suppose un nettoyage et une rencontre spirituelle pour être « propre, beau, paré » et avoir en abondance matériellement ; car l’agir chamanique implique une souillure délibérée pour être « piquant » et être à même d’accéder à l’invisible sans danger. Complémentaires, car le second a pour fonction de protéger ce qui a été acquis par la première de toute agression magique ou sorcellerie.
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- 2019
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14. La limpieza par le feu
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Sébastien Baud
- Abstract
A Cuzco (Perou), j’ai participe a des limpieza par le feu, une succession de gestes realisee pour extraire un mal, creer une enveloppe protectrice et renouveler une alliance. Ce rituel bricole temoigne d’une fonction moderatrice et mediatrice, tendant a preserver des equilibres fragiles. Il temoigne de meme d’une fonction reparatrice et restauratrice reiterable, laquelle definit le chamanisme andin contemporain. Lieu de rencontre entre l’experience interieure de la personne et le mode operatoire d’un dispositif symbolique, cette mise en scene d’un abime « contraint la chance a tourner » et permet un devenir au monde heur-eux. Dans cet article, j’aborde le rituel dans sa dynamique operatoire, interrogeant l’espace entre qu’il materialise, la transe qu’il donne a etre et la relation entre actants, ces porteurs d’appartenances specifiques et de marques culturelles qui les faconnent et les transforment.
- Published
- 2016
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15. Molecular and epigenetic regulations and functions of the LAFL transcriptional regulators that control seed development
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Bertrand Dubreucq, Céline Boulard, Martine Devic, T. J. Roscoe, Loïc Lepiniec, Sébastien Baud, Dao-Xiu Zhou, Daniel Bouyer, Institut Jean-Pierre Bourgin (IJPB), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Laboratoire d'Océanographie Microbienne (LOMIC), Institut national des sciences de l'Univers (INSU - CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Observatoire océanologique de Banyuls (OOB), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Diversité, adaptation, développement des plantes (UMR DIADE), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud]), Institut de biologie de l'ENS Paris (IBENS), Département de Biologie - ENS Paris, École normale supérieure - Paris (ENS-PSL), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Paris (ENS-PSL), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Institut des Sciences des Plantes de Paris-Saclay (IPS2 (UMR_9213 / UMR_1403)), Institut National de la Recherche Agronomique (INRA)-Université Paris-Sud - Paris 11 (UP11)-Université Paris Diderot - Paris 7 (UPD7)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), Labex Saclay Plant Sciences-SPS [ANR-10-LABX-0040-SPS], CERES project [ANR-10-BLAN-1238], Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Observatoire océanologique de Banyuls (OOB), Institut de biologie de l'ENS Paris (UMR 8197/1024) (IBENS), École normale supérieure - Paris (ENS Paris)-École normale supérieure - Paris (ENS Paris)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Diderot - Paris 7 (UPD7)-Université Paris-Saclay-Université Paris-Sud - Paris 11 (UP11), Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Institut national des sciences de l'Univers (INSU - CNRS)-Observatoire océanologique de Banyuls (OOB), Institut de Recherche pour le Développement (IRD [France-Sud])-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), École normale supérieure - Paris (ENS Paris), and Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Paris (ENS Paris)
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0106 biological sciences ,0301 basic medicine ,LAFL regulators ,Arabidopsis ,Pioneer factors ,Plant Science ,Computational biology ,Crop species ,01 natural sciences ,Epigenesis, Genetic ,03 medical and health sciences ,Genetics and epigenetics regulations ,Gene Expression Regulation, Plant ,Epigenetics ,Seed development and maturation ,Gene ,Transcription factor ,2. Zero hunger ,biology ,Arabidopsis Proteins ,Transcriptional network ,Gene Expression Regulation, Developmental ,[SDV.BDLR]Life Sciences [q-bio]/Reproductive Biology ,Cell Biology ,[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics ,biology.organism_classification ,Embryonic stem cell ,030104 developmental biology ,Fus3 ,Seeds ,Function (biology) ,010606 plant biology & botany ,Transcription Factors - Abstract
International audience; The LAFL (i.e. LEC1, ABI3, FUS3, and LEC2) master transcriptional regulators interact to form different complexes that induce embryo development and maturation, and inhibit seed germination and vegetative growth in Arabidopsis. Orthologous genes involved in similar regulatory processes have been described in various angiosperms including important crop species. Consistent with a prominent role of the LAFL regulators in triggering and maintaining embryonic cell fate, their expression appears finely tuned in different tissues during seed development and tightly repressed in vegetative tissues by a surprisingly high number of genetic and epigenetic factors. Partial functional redundancies and intricate feedback regulations of the LAFL have hampered the elucidation of the underpinning molecular mechanisms. Nevertheless, genetic, genomic, cellular, molecular, and biochemical analyses implemented during the last years have greatly improved our knowledge of the LALF network. Here we summarize and discuss recent progress, together with current issues required to gain a comprehensive insight into the network, including the emerging function of LEC1 and possibly LEC2 as pioneer transcription factors.
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- 2018
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16. Molecular and biochemical characterization of the sunflower (Helianthus annuus L.) cytosolic and plastidial enolases in relation to seed development
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Rafael Garcés, Enrique Martínez-Force, Rosario Sánchez, Mónica Venegas-Calerón, Antonio J. Moreno-Pérez, Jean Rivoal, Sébastien Baud, Sonia Dorion, Manuel Adrián Troncoso-Ponce, Institut Jean-Pierre Bourgin (IJPB), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Ministerio de Economía y Competitividad (España), European Commission, Ministerio de Economia y Competitividad', FEDER [AGL2014-53537-R], National Science and Engineering Research Council of Canada [RGPIN 227271], Hauts-de-France Region, and European Regional Development Fund (ERDF)
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0301 basic medicine ,Gene isoform ,Protein Conformation ,[SDV]Life Sciences [q-bio] ,Enolase ,Glucose-6-Phosphate ,Plant Science ,Biology ,Real-Time Polymerase Chain Reaction ,Phosphoenolpyruvate ,03 medical and health sciences ,Cytosol ,Affinity chromatography ,Glycolytic metabolism ,Helianthus annuus ,Genetics ,Plastids ,Site-directed mutagenesis ,Phylogeny ,ComputingMilieux_MISCELLANEOUS ,2. Zero hunger ,chemistry.chemical_classification ,Seed ,Sequence Analysis, DNA ,General Medicine ,Lipid Metabolism ,Lipids ,Amino acid ,Sunflower ,030104 developmental biology ,Enzyme ,chemistry ,Biochemistry ,Phosphopyruvate Hydratase ,Seeds ,Helianthus ,Transcriptome ,Phosphoenolpyruvate carboxykinase ,Sequence Alignment ,Agronomy and Crop Science - Abstract
57 Páginas.-- 2 Tablas.-- 10 Figuras.-- 3 Tablas suplementarias.-- 5 Figuras suplementarias, In the present study, we describe the molecular and biochemical characterization of sunflower (Helianthus annuus L.) enolase (ENO, EC 4.2.1.11) proteins, which catalyze the formation of phosphoenolpyruvate, the penultimate intermediate in the glycolytic pathway. We cloned and characterized three cDNAs encoding different ENO isoforms from developing sunflower seeds. Studies using fluorescently tagged ENOs confirmed the predicted subcellular localization of ENO isoforms: HaENO1 in the plastid while HaENO2 and HaENO3 were found in the cytosol. The cDNAs were used to express the corresponding 6(His)-tagged proteins in Escherichia coli. The proteins were purified to electrophoretic homogeneity, using immobilized metal ion affinity chromatography, and biochemically characterized. Recombinant HaENO1 and HaENO2, but not HaENO3 were shown to have enolase activity, in agreement with data obtained with the Arabidopsis homolog proteins. Site directed mutagenesis of several critical amino acids was used to attempt to recover enolase activity in recombinant HaENO3, resulting in very small increases that were not additive. A kinetic characterization of the two active isoforms showed that pH had similar effect on their velocity, that they had similar affinity for 2-phosphoglycerate, but that the kcat/Km of the plastidial enzyme was higher than that of the cytosolic isoform. Even though HaENO2 was always the most highly expressed transcript, the levels of expression of the three ENO genes were remarkably distinct in all the vegetative and reproductive tissues studied. This indicates that in seeds the conversion of 2-phosphoglycerate to phosphoenolpyruvate takes place through the cytosolic and the plastidial pathways therefore both routes could contribute to the supply of carbon for lipid synthesis. The identity of the main source of carbon during the period of stored products synthesis is discussed., This work was supported by the “Ministerio de Economía y Competitividad” and FEDER (AGL2014-53537-R). JR is supported by a Discovery Grant (RGPIN 227271) from the National Science and Engineering Research Council of Canada. The authors would also like to thank the Hauts-de-France Region and the European Regional Development Fund (ERDF) 2014/2020 for the funding of this work.
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- 2018
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17. Expériences néo-chamaniques
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Sébastien Baud
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Arts and Humanities (miscellaneous) ,Anthropology - Abstract
La maniere dont un anthropologue apprehende le terrain, goute les choses et les ressent, a un impact tant sur les donnees qu’il collecte que sur les analyses qu’il produit ensuite. Psychotropiques, sous-titre La fievre de l’ayahuasca en foret amazonienne, illustre cette evidence epistemologique. Ce livre de Jean-Loup Amselle est en effet un livre particulier du point de vue anthropologique dans la mesure ou, au nom d’un rationalisme a defendre, il critique une pratique sociale (le « vegetalis...
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- 2015
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18. Arabidopsis thaliana DGAT3 is a [2Fe-2S] protein involved in TAG biosynthesis
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Franjo Jagic, Pierre Briozzo, Simon Arragain, Marc Fontecave, Christelle Louis-Mondésir, Ornella Bimai, Thierry Chardot, Sébastien Baud, Michel Canonge, Laure Aymé, Nadia Touati, Institut Jean-Pierre Bourgin (IJPB), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Laboratoire de Chimie des Processus Biologiques (LCPB), Collège de France (CdF)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), PSL Research University (PSL), Fontecave, Marc, Chardot, Thierry, Chaire Chimie des processus biologiques, Collège de France (CdF (institution))-Institut de Chimie du CNRS (INC)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Collège de France (CdF (institution))-Institut de Chimie du CNRS (INC)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Université Paris sciences et lettres (PSL), and LabEx Saclay Plant Sciences-SPS (ANR-10-LABX-0040-SPS). The Laboratoire de Chimie des Processus Biologiques acknowledges financial support from the French National Research Agency (Labex program DYNAMO, ANR-11-LABX-0011) and the French EPR CNRS Facility, IR-Renard, FRE 3443 for the EPR experiments.
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Iron-Sulfur Proteins ,0106 biological sciences ,0301 basic medicine ,Chloroplasts ,[SDV.BIO]Life Sciences [q-bio]/Biotechnology ,Iron ,Arabidopsis ,lcsh:Medicine ,Germination ,medicine.disease_cause ,01 natural sciences ,Article ,03 medical and health sciences ,Thioredoxins ,Protein Domains ,Transit Peptide ,Escherichia coli ,medicine ,Metalloprotein ,Arabidopsis thaliana ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Diacylglycerol O-Acyltransferase ,lcsh:Science ,Ferredoxin ,Diacylglycerol kinase ,chemistry.chemical_classification ,Multidisciplinary ,biology ,Arabidopsis Proteins ,Protein Stability ,Chemistry ,lcsh:R ,food and beverages ,biology.organism_classification ,Lipids ,Recombinant Proteins ,Chloroplast ,iron ,lipids ,dgat ,arabidopsis thaliana ,030104 developmental biology ,Biochemistry ,Acyltransferases ,Seeds ,lcsh:Q ,010606 plant biology & botany - Abstract
Acyl-CoA:diacylglycerol acyltransferases 3 (DGAT3) are described as plant cytosolic enzymes synthesizing triacylglycerol. Their protein sequences exhibit a thioredoxin-like ferredoxin domain typical of a class of ferredoxins harboring a [2Fe-2S] cluster. The Arabidopsis thaliana DGAT3 (AtDGAT3; At1g48300) protein is detected in germinating seeds. The recombinant purified protein produced from Escherichia coli, although very unstable, exhibits DGAT activity in vitro. A shorter protein version devoid of its N-terminal putative chloroplast transit peptide, Δ46AtDGAT3, was more stable in vitro, allowing biochemical and spectroscopic characterization. The results obtained demonstrate the presence of a [2Fe-2S] cluster in the protein. To date, AtDGAT3 is the first metalloprotein described as a DGAT.
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- 2018
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19. MYB118 Represses Endosperm Maturation in Seeds of Arabidopsis
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Chloé Marchive, Véronique Brunaud, Guillaume Barthole, Ludivine Soubigou-Taconnat, Sébastien Baud, Bertrand Dubreucq, Loïc Lepiniec, Nathalie Berger, Alexandra To, Institut Jean-Pierre Bourgin (IJPB), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Institut National de la Recherche Agronomique (INRA), Unité de recherche en génomique végétale (URGV), Institut National de la Recherche Agronomique (INRA)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), and Centre National de la Recherche Scientifique (CNRS)-Université d'Évry-Val-d'Essonne (UEVE)-Institut National de la Recherche Agronomique (INRA)
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0106 biological sciences ,[SDV]Life Sciences [q-bio] ,Mutant ,Arabidopsis ,Plant Science ,01 natural sciences ,Endosperm ,DOMAIN ,Gene Expression Regulation, Plant ,Arabidopsis thaliana ,Research Articles ,GENE-EXPRESSION ,chemistry.chemical_classification ,0303 health sciences ,biology ,TRANSCRIPTIONAL REGULATION ,digestive, oral, and skin physiology ,Gene Expression Regulation, Developmental ,food and beverages ,Embryo ,ABSCISIC-ACID ,OIL ,Cell biology ,embryonic structures ,Protein Binding ,Transcriptional Activation ,animal structures ,DNA-BINDING ,Molecular Sequence Data ,Morphogenesis ,Genes, Plant ,03 medical and health sciences ,Botany ,Storage protein ,PLANTS ,DEVELOPMENTAL REGULATION ,030304 developmental biology ,EMBRYO DEVELOPMENT ,Base Sequence ,THALIANA ,Arabidopsis Proteins ,fungi ,Embryogenesis ,Cell Biology ,biology.organism_classification ,chemistry ,Mutation ,Transcription Factors ,010606 plant biology & botany - Abstract
In the exalbuminous species Arabidopsis thaliana, seed maturation is accompanied by the deposition of oil and storage proteins and the reduction of the endosperm to one cell layer. Here, we consider reserve partitioning between embryo and endosperm compartments. The pattern of deposition, final amount, and composition of these reserves differ between the two compartments, with the embryo representing the principal storage tissue in mature seeds. Complex regulatory mechanisms are known to prevent activation of maturation-related programs during embryo morphogenesis and, later, during vegetative growth. Here, we describe a regulator that represses the expression of maturation-related genes during maturation within the endosperm. MYB118 is transcriptionally induced in the maturing endosperm, and seeds of myb118 mutants exhibit an endosperm-specific derepression of maturation-related genes associated with a partial relocation of storage compounds from the embryo to the endosperm. Moreover, MYB118 activates endosperm-induced genes through the recognition of TAACGG elements. These results demonstrate that the differential partitioning of reserves between the embryo and endosperm in exalbuminous Arabidopsis seeds does not only result from developmental programs that establish the embryo as the preponderant tissue within seeds. This differential partitioning is also regulated by MYB118, which regulates the biosynthesis of reserves at the spatial level during maturation.
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- 2014
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20. Expériences « hors du corps » : un voyage « en esprit » à la rencontre d’un autre de soi
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Sébastien Baud
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Shamanisms ,new spiritualties ,psychedelics ,out-of-body experiences ,altered states of consciousness ,psychotropes ,Chamanismes ,nouvelles spiritualités ,expériences « hors du corps » ,altération de la conscience ,General Medicine - Abstract
Out-of-Body Experiences. A Soul’s Journey to Meet Another Self. In this paper, I would like to write an anthropology of altered states of consciousness, namely to question of the dynamic and content – which makes subjectivity – of such experiences. To do this, I review narratives and perceptions of the body during spiritual experiences (ritual or spontaneous) such as : 1. possession and psychedelic trips, at Peru, Cusco region (in urban areas) and among Awajun, a Jivaro linguistic family ; 2. Out-ofbody experiences from “ modernity” European. These experiences are characterized by the lucid feeling to see in a distance vision their body and its surroundings, which range from what I call another self or a subjectivity which feels itself as such. There is not denial and derealization, but recognition of the body, unlike psychopathological experiences in which the absence creates delusions. As consequence, the experiences are conceived as true by people. Furthermore, they allow a relationship characterized by a verbal exchange -possession or spiritual encounter – and the acquisition of knowledge that can be used for therapeutic purposes or witchcraft, divination and initiation., Dans cet article, je souhaite réaliser une anthropologie des états modifiés de la conscience, à savoir interroger leurs dynamiques et contenus – ce qui fait subjectivité. Pour ce faire, j’analyse récits et perceptions du corps lors d’expériences spirituelles, rituelles ou spontanées : transes de possession et voyages psychotropes au Pérou – précisément dans les Andes cuzquéniennes, et parmi les Awajun, famille linguistique jivaro ; et expériences «hors du corps » issues de la modernité européenne. Ces expériences se caractérisent par l’impression lucide pour les personnes qui les éprouvent de voir leur corps et ce qui l’environne à distance, depuis ce que j’appelle un autre de soi ou une subjectivité qui s’éprouve comme telle. Il n’y a ni déni de la réalité, ni distorsion déréalisante, mais reconnaissance du corps, contrairement aux expériences psychopathologiques dans lesquelles l’absence fonde l’illusion délirante. Conséquence d’une telle aperception, les expériences sont tenues pour vraies par celles et ceux qui les éprouvent. Mieux, elles autorisent une relation caractérisée par sa nature verbale – possession ou rencontre spirituelle – et l’acquisition de connaissances pouvant être utilisées à des fins thérapeutiques ou sorcellaires, divinatoires et initiatiques., Baud Sébastien. Expériences « hors du corps » : un voyage « en esprit » à la rencontre d’un autre de soi. In: Intellectica. Revue de l'Association pour la Recherche Cognitive, n°67, 2017/1. Les états modifiés de conscience en question : anciennes limites et nouvelles approches. pp. 347-366.
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- 2017
21. Transcriptional Activation of Two Delta-9 Palmitoyl-ACP Desaturase Genes by MYB115 and MYB118 Is Critical for Biosynthesis of Omega-7 Monounsaturated Fatty Acids in the Endosperm of Arabidopsis Seeds
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Geoffrey Tremblais, Manuel Adrián Troncoso-Ponce, Sébastien Baud, Martine Miquel, Guillaume Barthole, Loïc Lepiniec, Alexandra To, Institut Jean-Pierre Bourgin (IJPB), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Université Paris Saclay (COmUE), Research Executive Agency (TRIANON) [PIEF-GA-2013-625204], Labex Saclay Plant Sciences-SPS [ANR-10-LABX-0040-SPS], and Ile-de-France Region
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0106 biological sciences ,0301 basic medicine ,[SDV]Life Sciences [q-bio] ,Mutant ,Arabidopsis ,Plant Science ,Biology ,01 natural sciences ,Endosperm ,Mixed Function Oxygenases ,Fatty Acids, Monounsaturated ,03 medical and health sciences ,chemistry.chemical_compound ,Biosynthesis ,[SDV.IDA]Life Sciences [q-bio]/Food engineering ,Transcriptional regulation ,Arabidopsis thaliana ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process Engineering ,Research Articles ,chemistry.chemical_classification ,Arabidopsis Proteins ,fungi ,digestive, oral, and skin physiology ,Fatty acid ,food and beverages ,Embryo ,Cell Biology ,biology.organism_classification ,030104 developmental biology ,chemistry ,Biochemistry ,Seeds ,010606 plant biology & botany ,Transcription Factors - Abstract
International audience; In angiosperms, double fertilization of the embryo sac initiates the development of the embryo and the endosperm. In Arabidopsis thaliana, an exalbuminous species, the endosperm is reduced to one cell layer during seed maturation and reserves such as oil are massively deposited in the enlarging embryo. Here, we consider the strikingly different fatty acid (FA) compositions of the oils stored in the two zygotic tissues. Endosperm oil is enriched in omega-7 monounsaturated FAs, that represent more than 20 mol% of total FAs, whereas these molecular species are 10-fold less abundant in the embryo. Two closely related transcription factors, MYB118 and MYB115, are transcriptionally induced at the onset of the maturation phase in the endosperm and share a set of transcriptional targets. Interestingly, the endosperm oil of myb115 myb118 double mutants lacks omega-7 FAs. The identification of two Delta 9 palmitoyl-ACP desaturases responsible for omega-7 FA biosynthesis, which are activated by MYB115 and MYB118 in the endosperm, allows us to propose a model for the transcriptional control of oil FA composition in this tissue. In addition, an initial characterization of the structure-function relationship for these desaturases reveals that their particular substrate specificity is conferred by amino acid residues lining their substrate pocket that distinguish them from the archetype Delta 9 stearoyl-ACP desaturase.
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- 2016
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22. Controlling lipid accumulation in cereal grains
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Sébastien Baud, Guillaume Barthole, Loïc Lepiniec, Peter M. Rogowsky, Institut Jean-Pierre Bourgin (IJPB), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Reproduction et développement des plantes (RDP), Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National de la Recherche Agronomique (INRA)-École normale supérieure - Lyon (ENS Lyon), Agence Nationale pour la Recherche (ANR) [ANR-07-GPLA-019, ANR-07-BLAN-0211-02, ANR-10-GNM-009], École normale supérieure de Lyon (ENS de Lyon)-Institut National de la Recherche Agronomique (INRA)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS), and École normale supérieure - Lyon (ENS Lyon)-Institut National de la Recherche Agronomique (INRA)-Université Claude Bernard Lyon 1 (UCBL)
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ZEA-MAYS L ,[SDV.SA]Life Sciences [q-bio]/Agricultural sciences ,0106 biological sciences ,Starch ,Gene Expression ,ENDOSPERM ,2 OLEOSIN ISOFORMS ,Plant Science ,Breeding ,01 natural sciences ,Endosperm ,FATTY-ACID-COMPOSITION ,chemistry.chemical_compound ,Plant Proteins ,GENE-EXPRESSION ,2. Zero hunger ,chemistry.chemical_classification ,0303 health sciences ,EMBRYO ,food and beverages ,General Medicine ,Plants, Genetically Modified ,Oil ,Hydrocarbon ,Germination ,Seeds ,Genetic Engineering ,Oat ,Regulation ,GERMINATION ,Lipid accumulation ,chemistry.chemical_element ,Biology ,Zea mays ,03 medical and health sciences ,Biosynthesis ,Genetics ,Plant Oils ,Cereal ,Diacylglycerol O-Acyltransferase ,030304 developmental biology ,SEED OIL PRODUCTION ,Models, Genetic ,Seed ,Metabolism ,Maize ,OAT AVENA-SATIVA ,chemistry ,Agronomy ,MAIZE KERNEL OIL ,Edible Grain ,Agronomy and Crop Science ,Carbon ,010606 plant biology & botany - Abstract
Plant oils have so far been mostly directed toward food and feed production. Nowadays however, these oils are more and more used as competitive alternatives to mineral hydrocarbon-based products. This increasing demand for vegetable oils has led to a renewed interest in elucidating the metabolism of storage lipids and its regulation in various plant systems. Cereal grains store carbon in the form of starch in a large endosperm and as oil in an embryo of limited size. Complementary studies on kernel development and metabolism have paved the way for breeding or engineering new varieties with higher grain oil content. This could be achieved either by increasing the relative proportion of the oil-rich embryo within the grain, or by enhancing oil synthesis and accumulation in embryonic structures. For instance, diacylglycerol acyltransferase (DGAT) that catalyses the ultimate reaction in the biosynthesis of triacylglycerol appears to be a promising target for increasing oil content in maize embryos. Similarly, over-expression of the maize transcriptional regulators ZmLEAFY COTYLEDON1 and ZmWRINKLED1 efficiently stimulates oil accumulation in the kernels of transgenic lines. Redirecting carbon from starch to oil in the endosperm, though not yet realized, is discussed. (C) 2011 Elsevier Ireland Ltd. All rights reserved.
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- 2012
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23. Du cadavre à la plante psychotrope
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Sébastien Baud
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Awajún ,Social Sciences and Humanities ,cadavre ,Sciences Humaines et Sociales ,plante psychotrope ,war ,General Medicine ,transe ,trance ,psychotropic plant ,guerre ,corpse - Abstract
Dans un contexte caractérisé par un nombre limité et clos d’entités singulières, la société awajún témoignait par le passé de deux attitudes inverses envers les morts, selon qu’ils relevaient d’une même communauté dialectale ou non. Toutes deux ont cependant en commun de définir le cadavre comme étant un moyen d’acquérir une âme, censée investir une nouvelle identité (dans le cas de la chasse aux têtes) ; ou décrite en termes de vision-pouvoir intériorisée (dans le cas de la quête d’Ajútap). Aujourd’hui toutefois, ce rapport au corps mort a disparu au profit d’un renforcement de l’usage des plantes psychotropes comme moyen, pour la personne, de favoriser cette rencontre mystique : des plantes qui, selon la mythologie awajún, sont nées de la lente germination du cadavre d’un guerrier dans le giron de la terre., In a context were singular entities are limited, the Awajún expressed in the past two opposite attitudes towards the deads, according to their belonging or not to the same dialectical society. Both attitudes have yet in common to define the corpse as a means to acquire a soul, supposed to incorporate a new individuated existence (in the case of head hunting) ; or described in terms of vision-power, in the sense of “ being able to ” (in the case of the quest of Ajútap). Today, this relationship to the corpse has disappeared and has been replaced by a reinforcement of the usage of psychotropic plants as a means to meet the Ajútap spirit. According to the myth, these plants are born from the slow germination of the corpse inside the earth.
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- 2012
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24. Jean-Jacques Audubon. Scènes de la nature, ed. Henri Gourdin (éd.). Paris : Le Pommier, 2021, 352 p.Jean-Jacques Audubon. Vies d’oiseau., Henri Gourdin (éd.). Paris : Le Pommier, 2022, 884 p. Henri Gourdin. Du temps où les pingouins étaient nombreux… Jean-Jacques Audubon (1785-1851). Paris : Le Pommier, 2022, 360 p.
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Sébastien Baudoin
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ecology ,America ,fauna ,flora ,ornithology ,English language ,PE1-3729 - Published
- 2022
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25. PII is induced by WRINKLED1 and fine-tunes fatty acid composition in seeds of Arabidopsis thaliana
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Loïc Lepiniec, Michael Hodges, Martine Miquel, Julie Dechorgnat, Marianne Azzopardi, Christine Rochat, Sébastien Baud, Adeline Berger, Sylvie Ferrario-Méry, Ana Belen Feria Bourrellier, and Françoise Daniel-Vedele
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0106 biological sciences ,2. Zero hunger ,chemistry.chemical_classification ,0303 health sciences ,fungi ,Mutant ,Fatty acid ,Cell Biology ,Plant Science ,Metabolism ,Biology ,biology.organism_classification ,01 natural sciences ,Pyruvate carboxylase ,03 medical and health sciences ,chemistry.chemical_compound ,Enzyme ,Biochemistry ,chemistry ,Biosynthesis ,Arabidopsis ,Genetics ,Glycolysis ,030304 developmental biology ,010606 plant biology & botany - Abstract
Summary The PII protein is an integrator of central metabolism and energy levels. In Arabidopsis, allosteric sensing of cellular energy and carbon levels alters the ability of PII to interact with target enzymes such as N-acetyl-l-glutamate kinase and heteromeric acetyl-coenzyme A carboxylase, thereby modulating the biological activity of these plastidial ATP- and carbon-consuming enzymes. A quantitative reverse transcriptase-polymerase chain reaction approach revealed a threefold induction of the AtGLB1 gene (At4g01900) encoding PII during early seed maturation. The activity of the AtGLB1 promoter was consistent with this pattern. A complementary set of molecular and genetic analyses showed that WRINKLED1, a transcription factor known to induce glycolytic and fatty acid biosynthetic genes at the onset of seed maturation, directly controls AtGLB1 expression. Immunoblot analyses and immunolocalization experiments using anti-PII antibodies established that PII protein levels faithfully reflected AtGLB1 mRNA accumulation. At the subcellular level, PII was observed in plastids of maturing embryos. To further investigate the function of PII in seeds, comprehensive functional analyses of two pII mutant alleles were carried out. A transient increase in fatty acid production was observed in mutant seeds at a time when PII protein content was found to be maximal in wild-type seeds. Moreover, minor though statistically significant modifications of the fatty acid composition were measured in pII seeds, which exhibited decreased amounts of modified (elongated, desaturated) fatty acid species. The results obtained outline a role for PII in the fine tuning of fatty acid biosynthesis and partitioning in seeds.
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- 2010
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26. Role of WRINKLED1 in the transcriptional regulation of glycolytic and fatty acid biosynthetic genes in Arabidopsis
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Christine Rochat, Sébastien Baud, Sylvie Wuillème, Loïc Lepiniec, and Alexandra To
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Genetics ,Reporter gene ,Response element ,Promoter ,Cell Biology ,Plant Science ,Biology ,Cell biology ,Transcriptional regulation ,Consensus sequence ,Enhancer ,Transcription factor ,Gene - Abstract
Summary The WRINKLED1 (WRI1) protein is an important regulator of oil accumulation in maturing Arabidopsis seeds. WRI1 is a member of a plant-specific family of transcription factors (AP2/EREBP) that share either one or two copies of a DNA-binding domain called the AP2 domain. Here, it is shown that WRI1 acts as a transcriptional enhancer of genes involved in carbon metabolism in transgenic seeds overexpressing this transcription factor. PKp-β1 and BCCP2, two genes encoding enzymes of the glycolysis and fatty acid biosynthetic pathway, respectively, have been chosen to investigate the regulatory action exerted by WRI1 over these pathways. Using the reporter gene uidA, it was possible to demonstrate in planta that WRI1 regulates the activity of both PKp-β1 and BCCP2 promoters. Electrophoretic mobility-shift assays and yeast one-hybrid experiments showed that WRI1 was able to interact with the BCCP2 promoter. To further elucidate the regulatory mechanism controlling the transcription of these genes, functional dissections of PKp-β1 and BCCP2 promoters were performed. Two enhancers, of 54 and 79 bp, respectively, have thus been isolated that are essential to direct the activity of these promoters in oil-accumulating tissues of the embryo. A consensus site is present in these enhancers as well as in other putative target promoters of WRI1. Loss of this consensus sequence in the BCPP2 promoter decreases both the strength of the interaction between WRI1 and this promoter in yeast and the activity of the promoter in planta.
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- 2009
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27. Compared analysis of the regulatory systems controlling lipogenesis in hepatocytes of mice and in maturing oilseeds of Arabidopsis
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Sébastien Baud and Loïc Lepiniec
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Transcription, Genetic ,Arabidopsis ,General Biochemistry, Genetics and Molecular Biology ,Mice ,chemistry.chemical_compound ,Species Specificity ,Gene Expression Regulation, Plant ,Dietary Carbohydrates ,Animals ,Insulin ,Arabidopsis thaliana ,Liver X receptor ,Triglycerides ,Fatty acid synthesis ,Regulation of gene expression ,General Immunology and Microbiology ,biology ,Arabidopsis Proteins ,Lipogenesis ,Gene Expression Regulation, Developmental ,General Medicine ,Metabolism ,biology.organism_classification ,Sterol regulatory element-binding protein ,Glucose ,Gene Expression Regulation ,Biochemistry ,chemistry ,Seeds ,Hepatocytes ,Energy Metabolism ,General Agricultural and Biological Sciences ,Glycolysis ,Transcription Factors - Abstract
Due to the high reduction level of the carbons in fatty acids, the oxidation of triacylglycerols (TAGs) releases much more energy than the oxidation of other storage compounds like carbohydrates or proteins. TAGs are synthesized in many animal and plant species to act as an energy reserve. Here, we review some of the studies that have contributed to decipher the metabolic and regulatory networks responsible for the biosynthesis of TAGs in two contrasted model systems: the liver of mice and the maturing oilseed of Arabidopsis. A comparison of the two systems illustrates how distinct transcriptional regulatory systems trigger lipogenesis in response to specific signals: a high carbohydrate diet induces TAG synthesis in the liver of mammalians whereas a developmental program initiates TAG accumulation at the onset of embryo maturation in Arabidopsis.
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- 2008
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28. Deciphering the molecular mechanisms underpinning the transcriptional control of gene expression by L-AFL proteins in Arabidopsis seed
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Johanne Thévenin, Roberto Solano, Marta Godoy, Loïc Lepiniec, Bertrand Dubreucq, Emmanuel Thévenon, François Parcy, Alexandra To, Delphine Effroy-Cuzzi, Sébastien Baud, Sandrine Blanchet, Manon Payre, Zsolt Kelemen, Nathalie Berger, José Manuel Franco-Zorrilla, Céline Boulard, Institut Jean-Pierre Bourgin (IJPB), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Physiologie cellulaire et végétale (LPCV), Institut National de la Recherche Agronomique (INRA)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes (UGA)-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Department of Plant Molecular Genetics, Centro Nacional de Biotecnologia, Consejo Superior de Investigaciones Científicas [Spain] (CSIC), ERA-CAPS ABCEEDS, ANR-07-BLAN-0211,BLANC,Cracking the code of transcriptional regulation: the key to the past and future evolution of plants(2007), ANR-10-BLAN-1238,CERES,Contrôle de l'expression des gènes du REseau de régulation AFL et développement de la graine(2010), ANR-11-IDEX-02/10-LABX-0040,SPS,Saclay Plant Sciences(2011), Institut National de la Recherche Agronomique (INRA)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Consejo Superior de Investigaciones Científicas [Madrid] (CSIC), ANR-07-BLAN-0211,Plant-TFcode,Cracking the code of transcriptional regulation: the key to the past and future evolution of plants(2007), ANR-10-BLAN-1238,CERES,Contrôle de l'expression des gènes du REseau de régulation 'AFL' et développement de la graine(2010), ANR-11-IDEX-0002,UNITI,Université Fédérale de Toulouse(2011), Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Recherche Agronomique (INRA)-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), and Centro Nacional de Biotecnología [Madrid] (CNB-CSIC)
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0106 biological sciences ,0301 basic medicine ,LEAFY COTYLEDON2 ,Arabidopsis thaliana ,Physiology ,ABI3 ,Oleosin ,Plant Science ,Physcomitrella patens ,01 natural sciences ,03 medical and health sciences ,Arabidopsis ,Seed maturation ,Genetics ,Transcriptional regulation ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,B3 domain ,Gene ,Transcription factor ,Moss ,Regulation of gene expression ,Transcriptional Regulation ,DNA binding sites ,biology ,LEC2 ,FUSCA3 ,AFLs ,Protein ,Plant ,FUS3 ,biology.organism_classification ,Cell biology ,ABSCISIC ACID INSENSITIVE3 ,DNA binding site ,030104 developmental biology ,Gene expression ,OLEI promoter ,010606 plant biology & botany - Abstract
International audience; In Arabidopsis (Arabidopsis thaliana), transcriptional control of seed maturation involves three related regulators with a B3domain, namely LEAFY COTYLEDON2 (LEC2), ABSCISIC ACID INSENSITIVE3 (ABI3), and FUSCA3 (ABI3/FUS3/LEC2[AFLs]). Although genetic analyses have demonstrated partially overlapping functions of these regulators, the underlyingmolecular mechanisms remained elusive. The results presented here confirmed that the three proteins bind RY DNA elements(with a 59-CATG-39 core sequence) but with different specificities for flanking nucleotides. In planta as in the moss Physcomitrellapatens protoplasts, the presence of RY-like (RYL) elements is necessary but not sufficient for the regulation of the OLEOSIN1 (OLE1)promoter by the B3AFLs. G box-like domains, located in the vicinity of the RYL elements, also are required for proper activation ofthe promoter, suggesting that several proteins are involved. Consistentwith this idea, LEC2 andABI3 showed synergistic effects onthe activation of the OLE1 promoter. What is more, LEC1 (a homolog of the NF-YB subunit of the CCAAT-binding complex)further enhanced the activation of this target promoter in the presence of LEC2 and ABI3. Finally, recombinant LEC1 and LEC2proteins produced in Arabidopsis protoplasts could form a ternary complex with NF-YC2 in vitro, providing a molecular explanationfor their functional interactions. Taken together, these results allow us to propose a molecularmodel for the transcriptional regulationof seed genes by the L-AFL proteins, based on the formation of regulatory multiprotein complexes between NF-YBs, which carry aspecific aspartate-55 residue, and B3 transcription factors.
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- 2016
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29. Function of plastidial pyruvate kinases in seeds of Arabidopsis thaliana†
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Sylvie Wuillème, Loïc Lepiniec, Bertrand Dubreucq, Sébastien Baud, Aurélie De Almeida, Cindy Vuagnat, Christine Rochat, and Martine Miquel
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2. Zero hunger ,0106 biological sciences ,chemistry.chemical_classification ,0303 health sciences ,biology ,Mutant ,Fatty acid ,Cell Biology ,Plant Science ,biology.organism_classification ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,Metabolic pathway ,chemistry ,Biochemistry ,Arabidopsis ,Genetics ,Arabidopsis thaliana ,Plastid ,Pyruvate kinase ,Fatty acid synthesis ,030304 developmental biology ,010606 plant biology & botany - Abstract
Pyruvate kinase (PK) catalyses the irreversible synthesis of pyruvate and ATP, which are both used in multiple biochemical pathways. These compounds are essential for sustained fatty acid production in the plastids of maturing Arabidopsis embryos. Using a real-time quantitative reverse transcriptase (RT)-PCR approach, the three genes encoding putative plastidial PKs (PKps) in Arabidopsis, namely PKp1 (At3g22960), PKp2 (At5g52920) and PKp3 (At1g32440), were shown to be ubiquitously expressed. However, only PKp1 and PKp2 exhibited significant expression in maturing seeds. The activity of PKp1 and PKp2 promoters was consistent with this pattern, and the study of the PKp1:GFP and PKp2:GFP fusion proteins confirmed the plastidial localization of these enzymes. To further investigate the function of these two PKp isoforms in seeds comprehensive functional analyses were carried out, including the cytological, biochemical and molecular characterization of two pkp1 and two pkp2 alleles, together with a pkp1pkp2 double mutant. The results obtained outlined the importance of these PKps for fatty acid synthesis and embryo development. Mutant seeds were depleted of oil, their fatty acid content was drastically modified, embryo elongation was retarded and, finally, seed germination was also affected. Together, these results provide interesting insights concerning the carbon fluxes leading to oil synthesis in maturing Arabidopsis seeds. The regulation of this metabolic network by the WRINKLED1 transcription factor is discussed, and emphasizes the role of plastidial metabolism and the importance of its tight regulation.
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- 2007
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30. WRINKLED1 specifies the regulatory action of LEAFY COTYLEDON2 towards fatty acid metabolism during seed maturation in Arabidopsis
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Loïc Lepiniec, Erwana Harscoët, Alexandra To, Bertrand Dubreucq, Monica Santos Mendoza, and Sébastien Baud
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0106 biological sciences ,0303 health sciences ,Fatty acid metabolism ,biology ,Promoter ,Cell Biology ,Plant Science ,biology.organism_classification ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,chemistry ,Biochemistry ,Arabidopsis ,Genetics ,Glycolysis ,Gene ,Leafy ,Transcription factor ,Fatty acid synthesis ,030304 developmental biology ,010606 plant biology & botany - Abstract
The WRINKLED1 (WRI1) transcription factor has been shown to play a role of the utmost importance during oil accumulation in maturing seeds of Arabidopsis thaliana. However, little is known about the regulatory processes involved. In this paper, comprehensive functional analyses of three new mutants corresponding to null alleles of wri1 confirm that the induction of WRI1 is a prerequisite for fatty acid synthesis and is important for normal embryo development. The strong expression of WRI1 specifically detected at the onset of the maturation phase in oil-accumulating tissues of A. thaliana seeds is fully consistent with this function. Complementation experiments carried out with various seed-specific promoters emphasized the importance of a tight regulation of WRI1 expression for proper oil accumulation, raising the question of the factors controlling WRI1 transcription. Interestingly, molecular and genetic analyses using an inducible system demonstrated that WRI1 is a target of LEAFY COTYLEDON2 and is necessary for the regulatory action of LEC2 towards fatty acid metabolism. In addition to this, quantitative RT-PCR experiments suggested that several genes encoding enzymes of late glycolysis, the fatty acid synthesis pathway, and the biotin and lipoic acid biosynthetic pathways are targets of WRI1. Taken together, these results indicate new relationships in the regulatory model for the control of oil synthesis in maturing A. thaliana seeds. In addition, they exemplify how metabolic and developmental processes affecting the developing embryo can be coordinated at the molecular level.
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- 2007
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31. New insights on the organization and regulation of the fatty acid biosynthetic network in the model higher plant Arabidopsis thaliana
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Loïc Lepiniec, Krisztina Nikovics, Chloé Marchive, Sébastien Baud, Manuel Adrián Troncoso-Ponce, Institut Jean-Pierre Bourgin (IJPB), and Institut National de la Recherche Agronomique (INRA)-AgroParisTech
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0301 basic medicine ,[SDV]Life Sciences [q-bio] ,Arabidopsis ,Computational biology ,Biochemistry ,Genome ,Models, Biological ,03 medical and health sciences ,chloroplast ,Arabidopsis thaliana ,Plastid ,biology ,chloroplaste ,acide gras ,Fatty Acids ,General Medicine ,biology.organism_classification ,Lipid Metabolism ,Chloroplast ,Metabolic pathway ,Biosynthetic pathway ,030104 developmental biology ,Biosynthetic process ,fatty acid ,Functional genomics - Abstract
In the plastids of plant cells, fatty acid (FA) production is a central biosynthetic process. It provides acyl chains for the formation of a variety of acyl lipids fulfilling different biological functions ranging from membrane synthesis to signaling or carbon and energy storage. The biochemical pathway leading to the synthesis of FA has been described for a long time. Over the last 15 years, and after the genome of the model higher plant Arabidopsis thaliana has been sequenced, the scientific community has deployed approaches of functional genomics to identify the actors comprising this pathway. One of the puzzling aspects of the emerging molecular biology of FA synthesis resided in the occurrence of multigene families encoding most enzymes of the pathway. Studies carried out to investigate these families led to the conclusion that most members have acquired non-redundant roles in planta. This is usually the consequence of divergent expression patterns of these isogenes and/or of different substrate specificities of the isoforms they encode. Nevertheless, much remains to be elucidated regarding the molecular bases underpinning these specificities. Protein biochemistry together with emerging quantitative proteomic technologies have then led to a better understanding of the structure of the network, which is composed of multiprotein complexes organized within the stromal compartment of plastids: whereas growing evidence suggests that the early steps of the pathway might be associated to the inner envelope membrane, several late enzymes might be localized next to the thylakoids. The question of the existence of a large integrated protein assembly channeling substrates through the whole pathway that would span the stroma remains uncertain. Finally, recent discoveries regarding the post-translational regulation of the pathway open new research horizons and may guide the development of relevant biotechnological strategies aimed at monitoring FA production in plant systems.
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- 2015
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32. The AtSUC5 sucrose transporter specifically expressed in the endosperm is involved in early seed development in Arabidopsis
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Jocelyne Kronenberger, Sylvie Wuillème, Rémi Lemoine, Michel Caboche, Sébastien Baud, Christine Rochat, and Loïc Lepiniec
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0106 biological sciences ,Regulation of gene expression ,0303 health sciences ,biology ,Mutant ,food and beverages ,Cell Biology ,Plant Science ,biology.organism_classification ,Sucrose transport ,01 natural sciences ,Endosperm ,03 medical and health sciences ,Biochemistry ,Arabidopsis ,Complementary DNA ,Gene expression ,Genetics ,Arabidopsis thaliana ,030304 developmental biology ,010606 plant biology & botany - Abstract
The sucrose transporter gene AtSUC5 was studied as part of a programme aimed at identifying and studying the genes involved in seed maturation in Arabidopsis. Expression profiling of AtSUC5 using the technique of real-time quantitative reverse transcriptase polymerase chain reaction (RT-PCR) showed that the gene was specifically and highly induced during seed development between 4 and 9 days after flowering (DAF). Analysis of the activity of the AtSUC5 promoter in planta was consistent with this timing, and suggested that AtSUC5 expression is endosperm specific, spreading from the micropylar to the chalazal pole of the filial tissue. To demonstrate the function of AtSUC5, the corresponding cDNA was used to complement a sucrose uptake-deficient yeast mutant, thus confirming its sucrose transport capacity. To investigate the function in planta, three allelic mutants disrupted in the AtSUC5 gene were isolated and characterized. A strong but transient reduction in fatty acid concentration was observed in mutant seeds 8 DAF. This biochemical phenotype was associated with a slight delay in embryo development. Taken together, these data demonstrated the role of the AtSUC5 carrier in the nutrition of the filial tissues during early seed development. However, additional sugar uptake systems, which remain to be characterized, must be functional in developing seeds, especially during maturation of the embryo.
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- 2005
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33. Static and Dynamic Tooth Loading in Spur and Helical Geared Systems-Experiments and Model Validation
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Sébastien Baud and Philippe Velex
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Engineering ,business.product_category ,Bearing (mechanical) ,Reducer ,Rotor (electric) ,business.industry ,Mechanical Engineering ,Stiffness ,Structural engineering ,Computer Graphics and Computer-Aided Design ,Dynamic load testing ,Finite element method ,Computer Science Applications ,law.invention ,Mechanics of Materials ,law ,medicine ,medicine.symptom ,Fillet (mechanics) ,business ,Pinion - Abstract
The primary objective of this study is to validate a specific finite element code aimed at simulating dynamic tooth loading in geared rotor systems. Experiments have been conducted on a high-precision single stage spur and helical gear reducer with flexible shafts mounted on hydrostatic or hydrodynamic bearings. The numerical model is based on classical elements (shaft, lumped stiffnesses, …) and on a gear element which accounts for non-linear time-varying mesh stiffness, gear errors and tooth shape modifications. External and parametric excitations are derived from the instantaneous contact conditions between the mating flanks by using an iterative contact algorithm inserted in a time-step integration scheme. First, experimental and numerical results at low speeds are compared and confirmed that the proposed tooth mesh interface model is valid. Comparisons were then extended to dynamic fillet stresses on both spur and helical gears between 50–6000 rpm on pinion shaft. Despite a localized problem in the case of spur gears with one particular bearing arrangement, the broad agreement between the experimental and numerical response curves demonstrated that the model is representative of the dynamic behavior of geared systems.
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- 2002
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34. Function and Localization of the Arabidopsis thaliana Diacylglycerol Acyltransferase DGAT2 Expressed in Yeast
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Sébastien Baud, Florent Joffre, Laure Aymé, Bertrand Dubreucq, Thierry Chardot, Institut Jean-Pierre Bourgin (IJPB), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Centre Technique Industriel des Entreprises du Secteur des Corps Gras, DGA (Direction Generale de l'Armement)/DGAC (Direction Generale de l'Aviation Civile) [2012 93 0805], and Chardot, Thierry
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0106 biological sciences ,[SDV]Life Sciences [q-bio] ,acyl transférase ,Arabidopsis ,Intracellular Space ,Gene Expression ,Yeast and Fungal Models ,Plant Science ,01 natural sciences ,Biochemistry ,Lipid droplet ,Arabidopsis thaliana ,0303 health sciences ,Multidisciplinary ,biology ,acide gras ,Plant Biochemistry ,Immunochemistry ,food and beverages ,Plants ,Lipids ,Enzymes ,Protein Transport ,Acyltransferase ,Medicine ,diglycéride ,lipids (amino acids, peptides, and proteins) ,Research Article ,Science ,Arabidopsis Thaliana ,Saccharomyces cerevisiae ,Immunology ,Brassica ,Research and Analysis Methods ,03 medical and health sciences ,Saccharomyces ,Model Organisms ,Plant and Algal Models ,Diacylglycerol O-Acyltransferase ,Codon ,levure ,Triglycerides ,030304 developmental biology ,Diacylglycerol kinase ,Arabidopsis Proteins ,Organisms ,Fungi ,Biology and Life Sciences ,Proteins ,Lipid Droplets ,biology.organism_classification ,Lipid Metabolism ,Yeast ,enzyme ,Metabolism ,Acyltransferases ,Mutation ,Enzymology ,Heterologous expression ,010606 plant biology & botany - Abstract
Diacylglycerol acyltransferases (DGATs) catalyze the final and only committed step of triacylglycerol synthesis. DGAT activity is rate limiting for triacylglycerol accumulation in mammals, plants and microbes. DGATs belong to three different evolutionary classes. In Arabidopsis thaliana, DGAT1, encoded by At2g19450, is the major DGAT enzyme involved in triacylglycerol accumulation in seeds. Until recently, the function of DGAT2 (At3g51520) has remained elusive. Previous attempts to characterize its enzymatic function by heterologous expression in yeast were unsuccessful. In the present report we demonstrate that expression of a codon-optimized version of the DGAT2 gene is able to restore neutral lipid accumulation in the Saccharomyces cerevisiae mutant strain (H1246), which is defective in triacylglycerol biosynthesis. Heterologous expression of codon-optimized DGAT2 and DGAT1 induced the biogenesis of subcellular lipid droplets containing triacylglycerols and squalene. Both DGAT proteins were found to be associated with these lipid droplets. The fatty acid composition was affected by the nature of the acyltransferase expressed. DGAT2 preferentially incorporated C16:1 fatty acids whereas DGAT1 displayed preference for C16:0, strongly suggesting that these enzymes have contrasting substrate specificities.
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- 2014
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35. Specialization of Oleosins in Oil Body Dynamics during Seed Development in Arabidopsis Seeds
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Ghassen Trigui, Bertrand Dubreucq, Martine Miquel, Sabine d'Andrea, Adeline Berger, Carine Deruyffelaere, Zsolt Kelemen, Loïc Lepiniec, Alain Trubuil, Sébastien Baud, D'ANDREA, Sabine, Institut Jean-Pierre Bourgin (IJPB), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Equipe de Recherche Labellisée 3148, Centre National de la Recherche Scientifique (CNRS), INRA - Mathématiques et Informatique Appliquées (Unité MIAJ), and Institut National de la Recherche Agronomique (INRA)
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0106 biological sciences ,Physiology ,Mutant ,oil body ,Germination ,Plant Science ,01 natural sciences ,Article ,[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/Botanics ,03 medical and health sciences ,Oil body ,Imaging, Three-Dimensional ,Arabidopsis ,Organelle ,Genetics ,Arabidopsis thaliana ,Plant Oils ,030304 developmental biology ,Inclusion Bodies ,0303 health sciences ,biology ,Staining and Labeling ,Arabidopsis Proteins ,Wild type ,food and beverages ,[SDV.BDD.EO] Life Sciences [q-bio]/Development Biology/Embryology and Organogenesis ,[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics ,biology.organism_classification ,Cell biology ,arabidopsis ,Phenotype ,[SDV.BDD.EO]Life Sciences [q-bio]/Development Biology/Embryology and Organogenesis ,Biochemistry ,Seeds ,Regression Analysis ,Oleosin ,triacylglycerol ,oleosin ,seed development ,010606 plant biology & botany - Abstract
Oil bodies (OBs) are seed-specific lipid storage organelles that allow the accumulation of neutral lipids that sustain plantlet development after the onset of germination. OBs are covered with specific proteins embedded in a single layer of phospholipids. Using fluorescent dyes and confocal microscopy, we monitored the dynamics of OBs in living Arabidopsis (Arabidopsis thaliana) embryos at different stages of development. Analyses were carried out with different genotypes: the wild type and three mutants affected in the accumulation of various oleosins (OLE1, OLE2, and OLE4), three major OB proteins. Image acquisition was followed by a detailed statistical analysis of OB size and distribution during seed development in the four dimensions (x, y, z, and t). Our results indicate that OB size increases sharply during seed maturation, in part by OB fusion, and then decreases until the end of the maturation process. In single, double, and triple mutant backgrounds, the size and spatial distribution of OBs are modified, affecting in turn the total lipid content, which suggests that the oleosins studied have specific functions in the dynamics of lipid accumulation.
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- 2014
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36. The role of trehalose-6-phosphate synthase in Arabidopsis embryo development
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Ian A. Graham, Sébastien Baud, and Leonardo D. Gomez
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animal structures ,food.ingredient ,ATP synthase ,biology ,Mutant ,Embryogenesis ,Arabidopsis ,Wild type ,Embryo ,biology.organism_classification ,Biochemistry ,food ,Glucosyltransferases ,Mutation ,Seeds ,biology.protein ,Silique ,Cotyledon - Abstract
We previously showed that trehalose-6-phosphate synthase 1 (TPS1), which catalyses the first step in trehalose synthesis, is essential for embryo maturation in Arabidopsis [Eastmond, van Dijken, Spielman, Kerr, Tissier, Dickinson, Jones, Smeekens and Graham (2002) Plant J. 29, 225–235]. The tps1 mutant embryos develop more slowly than wild type. Patterning in the tps1 embryos appears normal but they do not progress past the torpedo stage to cotyledon stage, which is when storage reserves start to accumulate in the expanding cotyledons. Our initial data led to the hypothesis that trehalose metabolism plays a key role in regulating storage reserve accumulation by allowing the embryo to respond to the dramatic increase in sucrose levels that occurs at the torpedo stage of embryo development. More recent data demonstrate that while the tps1 mutant is blocked in the developmental progression of embryos from torpedo to cotyledon stage the expression of genes involved in the accumulation of storage reserves proceeds in a similar fashion to wild type. Thus it appears that induction of metabolic processes required for accumulation of storage reserves in tps1 occurs independently of the developmental stage and instead follows a temporal programme similar to wild-type seeds in the same silique.
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- 2005
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37. Expression variation in connected recombinant populations of Arabidopsis thaliana highlights distinct transcriptome architectures
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Yann Serrand, Loïc Lepiniec, Olivier Loudet, Francisco A. Cubillos, Christine Camilleri, Jennifer Yansouni, Samira Elftieh, Hamid Khalili, Marie-Laure Martin-Magniette, Sandrine Balzergue, Bertrand Dubreucq, Sébastien Baud, Jean-Pierre Renou, Institut Jean-Pierre Bourgin (IJPB), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Unité de recherche en génomique végétale (URGV), Centre National de la Recherche Scientifique (CNRS)-Université d'Évry-Val-d'Essonne (UEVE)-Institut National de la Recherche Agronomique (INRA), Mathématiques et Informatique Appliquées (MIA-Paris), ANR [RILKIT/07-GPLA-07003G, ARABIDOSEED/GPLA-007-01], European Commission, ERC [DECODE/ERC-2009-StG-243359], 'Arabidoseed' grant, Institut National de la Recherche Agronomique (INRA)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), and AgroParisTech-Institut National de la Recherche Agronomique (INRA)
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0106 biological sciences ,lcsh:QH426-470 ,Transcription, Genetic ,lcsh:Biotechnology ,[SDV]Life Sciences [q-bio] ,Quantitative Trait Loci ,Arabidopsis ,Quantitative trait locus ,eQTL ,01 natural sciences ,Evolution, Molecular ,Transcriptome ,03 medical and health sciences ,Molecular evolution ,lcsh:TP248.13-248.65 ,Natural variation ,Selection ,RILs ,Genetic variation ,Genetics ,Arabidopsis thaliana ,Allele ,Alleles ,030304 developmental biology ,Recombination, Genetic ,0303 health sciences ,biology ,Genetic Variation ,biology.organism_classification ,lcsh:Genetics ,Evolutionary biology ,Expression quantitative trait loci ,Research Article ,010606 plant biology & botany ,Biotechnology - Abstract
Background Expression traits can vary quantitatively between individuals and have a complex inheritance. Identification of the genetics underlying transcript variation can help in the understanding of phenotypic variation due to genetic factors regulating transcript abundance and shed light into divergence patterns. So far, only a limited number of studies have addressed this subject in Arabidopsis, with contrasting results due to dissimilar statistical power. Here, we present the transcriptome architecture in leaf tissue of two RIL sets obtained from a connected-cross design involving 3 commonly used accessions. We also present the transcriptome architecture observed in developing seeds of a third independent cross. Results The utilisation of the novel R/eqtl package (which goal is to automatize and extend functions from the R/qtl package) allowed us to map 4,290 and 6,534 eQTLs in the Cvi-0 × Col-0 and Bur-0 × Col-0 recombinant populations respectively. In agreement with previous studies, we observed a larger phenotypic variance explained by eQTLs in linkage with the controlled gene (potentially cis-acting), compared to distant loci (acting necessarily indirectly or in trans). Distant eQTLs hotspots were essentially not conserved between crosses, but instead, cross-specific. Accounting for confounding factors using a probabilistic approach (VBQTL) increased the mapping resolution and the number of significant associations. Moreover, using local eQTLs obtained from this approach, we detected evidence for a directional allelic effect in genes with related function, where significantly more eQTLs than expected by chance were up-regulated from one of the accessions. Primary experimental data, analysis parameters, eQTL results and visualisation of LOD score curves presented here are stored and accessible through the QTLstore service database http://qtlstore.versailles.inra.fr/. Conclusions Our results demonstrate the extensive diversity and moderately conserved eQTL landscape between crosses and validate the utilisation of expression traits to explore for candidates behind phenotypic variation among accessions. Furthermore, this stresses the need for a wider spectrum of diversity to fully understand expression trait variation within a species.
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- 2012
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38. WRINKLED Transcription Factors Orchestrate Tissue-Specific Regulation of Fatty Acid Biosynthesis in Arabidopsis
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Guillaume Barthole, Loïc Lepiniec, Jérôme Joubès, Alexandra To, Sébastien Baud, Alain Lécureuil, Sophie Jasinski, Aurélie Scagnelli, Institut Jean-Pierre Bourgin (IJPB), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Laboratoire de biogenèse membranaire (LBM), Université Bordeaux Segalen - Bordeaux 2-Centre National de la Recherche Scientifique (CNRS), and French National Research Agency (SOLAR) [ANR-10-GENM-009]
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0106 biological sciences ,EXPRESSION ,[SDV.SA]Life Sciences [q-bio]/Agricultural sciences ,GENES ,Arabidopsis ,Plant Science ,Flowers ,METABOLISM ,01 natural sciences ,03 medical and health sciences ,Membrane Lipids ,Gene Expression Regulation, Plant ,Transcriptional regulation ,Arabidopsis thaliana ,LOOP ,Transcription factor ,Triglycerides ,Research Articles ,030304 developmental biology ,ACCUMULATION ,chemistry.chemical_classification ,Regulation of gene expression ,0303 health sciences ,SEED OIL PRODUCTION ,biology ,integumentary system ,FUNCTIONAL-ANALYSIS ,THALIANA ,Arabidopsis Proteins ,Fatty Acids ,Acetyl-CoA carboxylase ,Fatty acid ,Cell Biology ,Metabolism ,ACETYL-COA CARBOXYLASE ,DOMAIN PROTEIN ,biology.organism_classification ,chemistry ,Biochemistry ,lipids (amino acids, peptides, and proteins) ,010606 plant biology & botany ,Transcription Factors - Abstract
Acyl lipids are essential constituents of all cells, but acyl chain requirements vary greatly and depend on the cell type considered. This implies a tight regulation of fatty acid production so that supply fits demand. Isolation of the Arabidopsis thaliana WRINKLED1 (WRI1) transcription factor established the importance of transcriptional regulation for modulating the rate of acyl chain production. Here, we report the isolation of two additional regulators of the fatty acid biosynthetic pathway, WRI3 and WRI4, which are closely related to WRI1 and belong to the APETALA2–ethylene-responsive element binding protein family of transcription factors. These three WRIs define a family of regulators capable of triggering sustained rates of acyl chain synthesis. However, expression patterns of the three WRIs differ markedly. Whereas only WRI1 activates fatty acid biosynthesis in seeds for triacylglycerol production, the three WRIs are required in floral tissues to provide acyl chains for cutin biosynthesis and prevent adherence of these developing organs and subsequent semisterility. The targets of these WRIs encode enzymes providing precursors (acyl chain and glycerol backbones) for various lipid biosynthetic pathways, but not the subsequent lipid-assembling enzymes. These results provide insights into the developmental regulation of fatty acid production in plants.
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- 2012
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39. Faire parler les montagnes
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Sébastien Baud
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- 2011
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40. Duplicate maize wrinkled1 transcription factors activate target genes involved in seed oil biosynthesis
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Jacques Rouster, Jean-Philippe Pichon, Vanessa Vernoud, Peter M. Rogowsky, Cyrille Py, Benjamin Pouvreau, Valérie Morin, Sébastien Baud, Ghislaine Gendrot, Wyatt Paul, Reproduction et développement des plantes (RDP), École normale supérieure - Lyon (ENS Lyon)-Institut National de la Recherche Agronomique (INRA)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS), Institut Jean-Pierre Bourgin (IJPB), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Laboratoire de Biologie Cellulaire et Moléculaire, BIOGEMMA, MaizeTF (GABI-GP-2003-6), MaizeYield (ANR-05-GPLA-031), HyperMaize (ANR-07-GPLA-019), Plant-TFcode of the Agence Nationale de la Recherche (ANR-07-BLAN-0211-02), Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National de la Recherche Agronomique (INRA)-École normale supérieure - Lyon (ENS Lyon), and École normale supérieure de Lyon (ENS de Lyon)-Institut National de la Recherche Agronomique (INRA)-Université Claude Bernard Lyon 1 (UCBL)
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0106 biological sciences ,Physiology ,Arabidopsis ,Plant Science ,01 natural sciences ,chemistry.chemical_compound ,Gene Expression Regulation, Plant ,Génétique des plantes ,Arabidopsis thaliana ,évolution ,Phylogeny ,Amino acid synthesis ,database ,Plant Proteins ,2. Zero hunger ,chemistry.chemical_classification ,0303 health sciences ,biology ,Fatty Acids ,food and beverages ,Amino acid ,Biochemistry ,expression patterns ,Seeds ,fatty-acid ,Glycolysis ,maïs ,Molecular Sequence Data ,arabidopsis-thaliana ,Plants genetics ,Genes, Plant ,Models, Biological ,Zea mays ,[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics ,03 medical and health sciences ,Biosynthesis ,Genes, Duplicate ,Genetics, Genomics, and Molecular Evolution ,Genetics ,Plant Oils ,Gene ,Triglycerides ,030304 developmental biology ,Base Sequence ,maturation ,transformation ,Gene Expression Profiling ,Genetic Complementation Test ,Fatty acid ,lipid-metabolism ,protein ,networks ,biology.organism_classification ,Citric acid cycle ,chemistry ,Mutation ,Transcription Factors ,010606 plant biology & botany - Abstract
L'article original est publié par The American Society of Plant Biologists; WRINKLED1 (WRI1), a key regulator of seed oil biosynthesis in Arabidopsis (Arabidopsis thaliana), was duplicated during the genome amplification of the cereal ancestor genome 90 million years ago. Both maize (Zea mays) coorthologs ZmWri1a and ZmWri1b show a strong transcriptional induction during the early filling stage of the embryo and complement the reduced fatty acid content of Arabidopsis wri1-4 seeds, suggesting conservation of molecular function. Overexpression of ZmWri1a not only increases the fatty acid content of the mature maize grain but also the content of certain amino acids, of several compounds involved in amino acid biosynthesis, and of two intermediates of the tricarboxylic acid cycle. Transcriptomic experiments identified 18 putative target genes of this transcription factor, 12 of which contain in their upstream regions an AW box, the cis-element bound by AtWRI1. In addition to functions related to late glycolysis and fatty acid biosynthesis in plastids, the target genes also have functions related to coenzyme A biosynthesis in mitochondria and the production of glycerol backbones for triacylglycerol biosynthesis in the cytoplasm. Interestingly, the higher seed oil content in ZmWri1a overexpression lines is not accompanied by a reduction in starch, thus opening possibilities for the use of the transgenic maize lines in breeding programs.
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- 2011
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41. PII is induced by WRINKLED1 and fine-tunes fatty acid composition in seeds of Arabidopsis thaliana
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Sébastien, Baud, Ana Belen, Feria Bourrellier, Marianne, Azzopardi, Adeline, Berger, Julie, Dechorgnat, Françoise, Daniel-Vedele, Loïc, Lepiniec, Martine, Miquel, Christine, Rochat, Michael, Hodges, and Sylvie, Ferrario-Méry
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Arabidopsis Proteins ,Gene Expression Profiling ,PII Nitrogen Regulatory Proteins ,Fatty Acids ,Mutation ,Seeds ,Arabidopsis ,Plastids ,Promoter Regions, Genetic ,Models, Biological ,Transcription Factors - Abstract
The PII protein is an integrator of central metabolism and energy levels. In Arabidopsis, allosteric sensing of cellular energy and carbon levels alters the ability of PII to interact with target enzymes such as N-acetyl-l-glutamate kinase and heteromeric acetyl-coenzyme A carboxylase, thereby modulating the biological activity of these plastidial ATP- and carbon-consuming enzymes. A quantitative reverse transcriptase-polymerase chain reaction approach revealed a threefold induction of the AtGLB1 gene (At4g01900) encoding PII during early seed maturation. The activity of the AtGLB1 promoter was consistent with this pattern. A complementary set of molecular and genetic analyses showed that WRINKLED1, a transcription factor known to induce glycolytic and fatty acid biosynthetic genes at the onset of seed maturation, directly controls AtGLB1 expression. Immunoblot analyses and immunolocalization experiments using anti-PII antibodies established that PII protein levels faithfully reflected AtGLB1 mRNA accumulation. At the subcellular level, PII was observed in plastids of maturing embryos. To further investigate the function of PII in seeds, comprehensive functional analyses of two pII mutant alleles were carried out. A transient increase in fatty acid production was observed in mutant seeds at a time when PII protein content was found to be maximal in wild-type seeds. Moreover, minor though statistically significant modifications of the fatty acid composition were measured in pII seeds, which exhibited decreased amounts of modified (elongated, desaturated) fatty acid species. The results obtained outline a role for PII in the fine tuning of fatty acid biosynthesis and partitioning in seeds.
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- 2010
42. Acyl-Lipid Metabolism
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Ikuo Nishida, Isabel Molina, Debono Allan George, Ian A. Graham, Jonathan E. Markham, Tony R. Larson, Changcheng Xu, Rémi Zallot, Owen Rowland, Rochus Franke, John B. Ohlrogge, Philippe D. Bates, Hajime Wada, Kenta Katayama, Martine Miquel, Fred Beisson, Amélie A. Kelly, Basil S. Shorrosh, Ruth Welti, Timithy P. Durrett, David Bird, Lacey Samuels, Sébastien Baud, Mats X. Andersson, Vincent Arondel, Yonghua Li-Beisson, Katherine M. Schmid, Environnement, Bioénergie, Microalgues et Plantes (EBMP), Institut de Biosciences et Biotechnologies d'Aix-Marseille (ex-IBEB) (BIAM), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Department of Plant Biology - Michigan State University, Michigan State University [East Lansing], Michigan State University System-Michigan State University System, Bioénergie et Microalgues (EBM), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), and Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)
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0106 biological sciences ,2. Zero hunger ,0303 health sciences ,biology ,[SDV]Life Sciences [q-bio] ,Galactolipids ,Lipid metabolism ,Cutin ,Articles ,15. Life on land ,biology.organism_classification ,Molecular biology ,01 natural sciences ,Sphingolipid ,03 medical and health sciences ,chemistry.chemical_compound ,Metabolic pathway ,Biosynthesis ,chemistry ,Biochemistry ,Suberin ,Arabidopsis ,lipids (amino acids, peptides, and proteins) ,030304 developmental biology ,010606 plant biology & botany - Abstract
Lipides acyle dans Arabidopsis et toutes les autres plantes ont une myriade de fonctions diverses. Il s'agit notamment de fournir la barriere de diffusion de base des membranes qui separe les cellules et les organites subcellulaires. Cette fonction implique seuls plus de 10 classes de lipides membranaires, y compris les phospholipides, galactolipides, et sphingolipides, et au sein de chaque classe, les variations dans la composition de la chaine acyle augmenter le nombre de structures a plusieurs centaines de possibles especes moleculaires. Lipides acyle dans le sous forme de compte triacylglycerol de 35% du poids de graines d'Arabidopsis et representent leur forme majeure de carbone et de stockage d'energie. Une couche de cutine et les cires cuticulaires qui limite la perte d'eau et offre une protection contre les invasions par des agents pathogenes et autres stress recouvre toute la surface aerienne d'Arabidopsis. Des fonctions similaires sont fournis par la suberine et des cires associes qui sont localisees dans les racines, les teguments et les zones d'abscission et sont produites en reponse a une blessure. Ce chapitre se concentre sur les voies metaboliques qui sont associes a la biosynthese et la degradation des lipides acyle mentionnes ci-dessus. Ces voies, les enzymes et les genes sont egalement presentes en detail dans un site Web associe (ARALIP: http://aralip.plantbiology.msu.edu/ ). Protocoles et methodes utilises pour l'analyse des lipides Arabidopsis sont fournis. Enfin, un resume detaille de la composition des lipides Arabidopsis est fourni en trois chiffres et 15 tables.
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- 2010
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43. Physiological and developmental regulation of seed oil production
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Loïc Lepiniec, Sébastien Baud, Institut Jean-Pierre Bourgin (IJPB), and Institut National de la Recherche Agronomique (INRA)-AgroParisTech
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0106 biological sciences ,Morphogenesis ,Metabolic network ,Photosynthesis ,01 natural sciences ,Biochemistry ,03 medical and health sciences ,metabolic network ,Plant Oils ,transcriptional regulation ,Triglycerides ,030304 developmental biology ,2. Zero hunger ,0303 health sciences ,biology ,business.industry ,Fatty Acids ,food and beverages ,Cell Biology ,biology.organism_classification ,Oil ,Biotechnology ,[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biomolecules [q-bio.BM] ,Crosstalk (biology) ,Metabolic pathway ,Seedling ,Biosynthetic process ,Oil production ,Seeds ,fatty acid ,triacylglycerol ,business ,Energy Metabolism ,seed ,010606 plant biology & botany - Abstract
Triacylglycerols (TAGs) constitute a highly efficient form of energy storage. In seeds of angiosperms, they can act as a reserve of carbon and energy allowing to fuel post-germinative seedling growth until photosynthesis becomes effective. They also constitute the economic value of seeds in many crops. In the past years, extensive tools allowing the molecular dissection of plant metabolism have been developed together with analytical and cytological procedures adapted for seed material. These tools have allowed gaining a comprehensive overview of the metabolic pathways leading to TAG synthesis. They have also unravelled factors limiting oil production such as metabolic bottlenecks and light or oxygen availability in seed tissues. Beyond these physiological aspects, accumulation of TAGs is developmentally regulated in seeds. The oil biosynthetic process is initiated at the onset of the maturation phase, once embryo morphogenesis is achieved. A wealth of recent studies has shed new lights on the intricate regulatory network controlling the seed maturation phase, including reserve deposition. This network involves a set of regulated transcription factors that crosstalk with physiological signaling. The knowledge thus acquired paves the way for the genetic engineering of oilseed crops dedicated to food applications or green chemistry.
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- 2010
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44. Role of WRINKLED1 in the transcriptional regulation of glycolytic and fatty acid biosynthetic genes in Arabidopsis
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Sébastien, Baud, Sylvie, Wuillème, Alexandra, To, Christine, Rochat, and Loïc, Lepiniec
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Transcriptional Activation ,Base Sequence ,DNA, Plant ,Arabidopsis Proteins ,Fatty Acids ,Molecular Sequence Data ,Arabidopsis ,Plants, Genetically Modified ,Enhancer Elements, Genetic ,Gene Expression Regulation, Plant ,Consensus Sequence ,Seeds ,Mutagenesis, Site-Directed ,Promoter Regions, Genetic ,Glycolysis ,Transcription Factors - Abstract
The WRINKLED1 (WRI1) protein is an important regulator of oil accumulation in maturing Arabidopsis seeds. WRI1 is a member of a plant-specific family of transcription factors (AP2/EREBP) that share either one or two copies of a DNA-binding domain called the AP2 domain. Here, it is shown that WRI1 acts as a transcriptional enhancer of genes involved in carbon metabolism in transgenic seeds overexpressing this transcription factor. PKp-beta1 and BCCP2, two genes encoding enzymes of the glycolysis and fatty acid biosynthetic pathway, respectively, have been chosen to investigate the regulatory action exerted by WRI1 over these pathways. Using the reporter gene uidA, it was possible to demonstrate in planta that WRI1 regulates the activity of both PKp-beta1 and BCCP2 promoters. Electrophoretic mobility-shift assays and yeast one-hybrid experiments showed that WRI1 was able to interact with the BCCP2 promoter. To further elucidate the regulatory mechanism controlling the transcription of these genes, functional dissections of PKp-beta1 and BCCP2 promoters were performed. Two enhancers, of 54 and 79 bp, respectively, have thus been isolated that are essential to direct the activity of these promoters in oil-accumulating tissues of the embryo. A consensus site is present in these enhancers as well as in other putative target promoters of WRI1. Loss of this consensus sequence in the BCPP2 promoter decreases both the strength of the interaction between WRI1 and this promoter in yeast and the activity of the promoter in planta.
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- 2009
45. Regulation of HSD1 in Seeds of Arabidopsis thaliana
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Loïc Lepiniec, Nathalie Berger, Sabine d'Andrea, Thierry Chardot, Martine Miquel, Jocelyne Kronenberger, Alexandra To, Zsolt Kelemen, Michel Canonge, David Viterbo, Bertrand Dubreucq, Neel Reinhard Dichow, Sébastien Baud, Biologie des Semences (LBS), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Institut des sciences du végétal (ISV), Centre National de la Recherche Scientifique (CNRS), Chimie Biologique (UCB), Institut National de la Recherche Agronomique (INRA)-Institut National Agronomique Paris-Grignon (INA P-G), Biologie moléculaire des organismes photosynthétiques (UMR8186), Département de Biologie - ENS Paris, École normale supérieure - Paris (ENS-PSL), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Paris (ENS-PSL), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Génétique Moléculaire des Levures, Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), Dagmar and Joseph Samsons Foundation, and French National Research Agency (grants numbers GNP05063G and ANR07BLAN021102)
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DNA, Complementary ,LEAFY COTYLEDON2 ,Arabidopsis thaliana ,Physiology ,Transgene ,[SDV]Life Sciences [q-bio] ,Arabidopsis ,Germination ,Plant Science ,In situ hybridization ,Gene Expression Regulation, Plant ,Transcriptional regulation ,RNA, Messenger ,hydroxysteroid dehydrogenase 1 ,Promoter Regions, Genetic ,Leafy ,Gene ,Triglycerides ,Regulation of gene expression ,biology ,Arabidopsis Proteins ,oil bodies ,Gene Expression Regulation, Developmental ,Cell Biology ,General Medicine ,biology.organism_classification ,Plants, Genetically Modified ,Molecular biology ,Cell biology ,RNA, Plant ,Seeds ,11-beta-Hydroxysteroid Dehydrogenases ,triacylglycerol ,seed ,hormones, hormone substitutes, and hormone antagonists ,Transcription Factors - Abstract
International audience; The hydroxysteroid dehydrogenase HSD1, identified in the proteome of oil bodies from mature Arabidopsis seeds, is encoded by At5g50600 and At5g50700, two gene copies anchored on a duplicated region of chromosome 5. Using a real-time quantitative reverse transcriptasepolymerase chain reaction (RTPCR) approach, the accumulation of HSD1 mRNA was shown to be specifically and highly induced in oil-accumulating tissues of maturing seeds. HSD1 mRNA disappeared during germination. The activity of HSD1 promoter and the localization of HSD1 transcripts by in situ hybridization were consistent with this pattern. A complementary set of molecular and genetic analyses showed that HSD1 is a target of LEAFY COTYLEDON2, a transcriptional regulator able to bind the promoter of HSD1. Immunoblot analyses and immunolocalization experiments using anti-AtHSD1 antibodies established that the pattern of HSD1 deposition faithfully reflected mRNA accumulation. At the subcellular level, the study of HSD1:GFP fusion proteins showed the targeting of HSD1 to the surface of oil bodies. Transgenic lines overexpressing HSD1 were then obtained to test the importance of proper transcriptional regulation of HSD1 in seeds. Whereas no impact on oil accumulation could be detected, transgenic seeds exhibited lower cold and light requirements to break dormancy, germinate and mobilize storage lipids. Interestingly, overexpressors of HSD1 over-accumulated HSD1 protein in seeds but not in vegetative organs, suggesting that post-transcriptional regulations exist that prevent HSD1 accumulation in tissues deprived of oil bodies.
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- 2009
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46. Être agi, à propos de l'extase possessive dans le chamanisme sud-américain
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Sébastien Baud
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- 2009
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47. Liste des Auteurs
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Philippe Birmes, Laurent Schmitt, Laurent Tremblay, Christian Ghasarian, Lara Bauer, R. Klein, Mikael Banayan, Julien Billard, Jérôme Palazzolo, Arnaud Halloy, Charlotte Allenou, Sébastien Baud, Juan González, Christophe Arbus, Nancy Midol, Joël Candau, Édouard Collot, and Eric Bui
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- 2009
- Full Text
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48. Introduction: le normal et le pathologique à la croisée des regards psychiatriques et anthropologiques
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Nancy Midol and Sébastien Baud
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- 2009
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49. Regulation of de novo fatty acid synthesis in maturing oilseeds of Arabidopsis
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Loïc Lepiniec and Sébastien Baud
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Physiology ,Arabidopsis ,Metabolic network ,Plant Science ,Genes, Plant ,chemistry.chemical_compound ,Gene Expression Regulation, Plant ,Genetics ,Transcriptional regulation ,Plant Oils ,RNA, Messenger ,Transcription factor ,Fatty acid synthesis ,Triglycerides ,chemistry.chemical_classification ,biology ,Arabidopsis Proteins ,Fatty Acids ,food and beverages ,Fatty acid ,biology.organism_classification ,Biosynthetic Pathways ,Up-Regulation ,Metabolic pathway ,chemistry ,Biochemistry ,Seeds ,Polyunsaturated fatty acid ,Transcription Factors - Abstract
As a Brassicaceae, Arabidopsis thaliana constitutes an excellent model system to investigate oil biosynthesis in seeds. Extensive tools for the genetic and molecular dissection of this model species are now available. Together with analytical procedures adapted to its tiny seeds, these tools have allowed major advances in isolating and characterising the factors that participate in the metabolic and developmental control of seed filling. Once the biochemical pathways producing storage lipids, namely triacylglycerols, were elucidated, the question of the regulation of this metabolic network has arisen. The coordinated up regulation of genes encoding enzymes of the fatty acid biosynthetic pathway observed at the onset of seed maturation suggests that the pathway may be subjected to a system of global transcriptional regulation. This has been further established by the study of master regulators of the maturation program like LEAFY COTYLEDON2 and the characterisation of the WRINKLED1 transcription factor. These factors have been shown to participate in a regulatory cascade controlling the induction of the genes involved in fatty acid biosynthesis at the onset of the maturation phase. Although much remains to be elucidated, the framework of the regulatory system controlling fatty acid biosynthesis in Arabidopsis seeds is coming into focus.
- Published
- 2008
50. Storage Reserve Accumulation in Arabidopsis: Metabolic and Developmental Control of Seed Filling
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Bertrand Dubreucq, Sébastien Baud, Martine Miquel, Loïc Lepiniec, and Christine Rochat
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chemistry.chemical_classification ,biology ,business.industry ,Morphogenesis ,food and beverages ,Embryo ,Articles ,biology.organism_classification ,Biotechnology ,Metabolic pathway ,chemistry ,Seedling ,Arabidopsis ,Botany ,Arabidopsis thaliana ,Storage protein ,business ,Sugar - Abstract
In the life cycle of higher plants, seed development is a key process connecting two distinct sporophytic generations. Seed development can be divided into embryo morphogenesis and seed maturation. An essential metabolic function of maturing seeds is the deposition of storage compounds that are mobilised to fuel post-germinative seedling growth. Given the importance of seeds for food and animal feed and considering the tremendous interest in using seed storage products as sustainable industrial feedstocks to replace diminishing fossil reserves, understanding the metabolic and developmental control of seed filling constitutes a major focus of plant research. Arabidopsis thaliana is an oilseed species closely related to the agronomically important Brassica oilseed crops. The main storage compounds accumulated in seeds of A. thaliana consist of oil stored as triacylglycerols (TAGs) and seed storage proteins (SSPs). Extensive tools developed for the molecular dissection of A. thaliana development and metabolism together with analytical and cytological procedures adapted for very small seeds have led to a good description of the biochemical pathways producing storage compounds. In recent years, studies using these tools have shed new light on the intricate regulatory network controlling the seed maturation process. This network involves sugar and hormone signalling together with a set of developmentally regulated transcription factors. Although much remains to be elucidated, the framework of the regulatory system controlling seed filling is coming into focus.
- Published
- 2008
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