832 results on '"S. Currie"'
Search Results
2. Dark roads aid movement but increase mortality of a generalist herbivore in the American Southwest
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Kaitlyn M. Frank, Mark A. Ditmer, David C. Stoner, William S. Currie, Daniel D. Olson, and Neil H. Carter
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artificial light at night ,generalized linear mixed model ,landscape ecology ,movement ecology ,mule deer ,Odocoileus hemionus ,Ecology ,QH540-549.5 - Abstract
Abstract Road networks pose many well‐documented threats to wildlife, from fragmenting habitats and restricting movement to causing mortality through vehicle collisions. For large, wide‐ranging mammals, home range requirements and seasonal migrations often necessitate road crossings, posing threats to human safety, property, and animal survival. Artificial nightlight, emanating from light posts and urban sky glow, is ubiquitous on and around road networks worldwide; however, its effects on road crossing behavior and the associated mortality risk for wildlife are not well understood. By integrating the latest NASA nightlight products with GPS collar data collected from 67 mule deer (Odocoileus hemionus) over a 7‐year period (2012–2018), we used a resource‐selection framework to assess factors influencing seasonal crossing behavior and road mortality in Salt Lake City, Utah, an expanding metropolitan area in the United States. We found deer preferred to cross the road where surrounding artificial nightlight was lower in both summer and winter seasons, especially during crepuscular and nighttime periods. However, lower nightlight levels also increased the risk of road mortality. Areas with more shrub cover and lower speed limits increased the likelihood of crossing as well as lowered the risk of road mortality. There were five times as many mortality events in winter as in summer, likely because of the combination of deer preference for dark roads mixed with proximity to both higher speed roads and increased human activity. Better understanding how a pervasive and expanding environmental pollutant like artificial nightlight may attract or repel human‐tolerant wildlife species from roadways presents an opportunity to mitigate collision risk while improving population management strategies for this abundant, generalist herbivore and many other economically and ecologically important species.
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- 2023
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3. Size-dependent analyses provide insights into the reproductive allocation and plasticity of invasive and native Typha
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Emily E. Jameson, Kenneth Elgersma, Jason P. Martina, William S. Currie, and Deborah E. Goldberg
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Ecology ,Ecology, Evolution, Behavior and Systematics - Published
- 2022
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4. A Comprehensive Clinical Review of Adult-Type Diffuse Glioma Incorporating the 2021 World Health Organization Classification
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S. Currie, K. Fatania, R. Matthew, H. Wurdak, A. Chakrabarty, L. Murray, and S. Short
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Radiology, Nuclear Medicine and imaging - Abstract
The intent of this article is to provide a comprehensive, educational review of adult-type diffuse gliomas, bringing together the role of the multidisciplinary team and giving the reader biologic, surgical, radiologic, and oncologic insight into these tumors. The reader will be guided through subsections that explain the molecular pathophysiology, diagnosis, treatment, prognosis and natural history of the disease. The 2021 World Health Organization Classification will be explained through a combination of concise historic review of glioma diagnosis and contemporary knowledge of the molecular pathways. Accompanying illustrations will act as powerful tools for comprehension. These concepts will be underpinned by frequent reference to neuroradiology and a grounding of normal brain composition.Learning Objective: To understand the pathophysiologic concepts that underly the World Health Organization Classification and natural history of adult-type diffuse gliomas and how these relate to imaging and treatment strategies
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- 2022
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5. Enhancing Great Lakes coastal ecosystems research by initiating engagement between scientists and decision-makers
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Doug Pearsall, Jason P. Martina, Kurt P. Kowalski, Charlotte B. Weinstein, Q. F. Hamlin, S. L. Martin, David W. Hyndman, Laura L. Bourgeau-Chavez, William S. Currie, and Katherine Grantham
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0106 biological sciences ,Ecology ,Process (engineering) ,010604 marine biology & hydrobiology ,Stakeholder ,010501 environmental sciences ,Aquatic Science ,01 natural sciences ,Political science ,Sustainability ,Ecosystem ,Duration (project management) ,Environmental planning ,Ecology, Evolution, Behavior and Systematics ,Environmental quality ,0105 earth and related environmental sciences - Abstract
A disconnect between scientific research and environmental management communities can be a detriment to both. In the case of Great Lakes coastal ecosystems, which are inherently complex and subject to uncertain effects of future climatic, environmental, and anthropogenic drivers, greater collaboration could be beneficial to their sustainability. We capture the challenges and opportunities identified by a scientist/decision-maker co-production workshop focused on the future environmental quality of Great Lakes coastal wetlands. We explain our path through the stakeholder workshop process, our challenges in translating meeting outcomes into actionable items, and lessons learned to bridge gaps between scientists and decision-makers. Additionally, we determine topics and directions identified by decision-makers that can be modeled with existing technologies and others that require further research. These topics may be incorporated into future research efforts and could serve as a shortlist of research priorities that were identified by decision-makers working with coastal wetland issues. Based on lessons learned during and after the workshop, we provide suggestions for bridging the gap between researchers and decision-makers, including sustained engagement between these groups and improved interaction through the beginning, duration, and end of research and/or management efforts.
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- 2021
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6. Effectiveness of cattail ('Typha' spp.) management techniques depends on exogenous nitrogen inputs
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Kenneth J. Elgersma, Jason P. Martina, Deborah E. Goldberg, and William S. Currie
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Typha ,restoration ,fire ,herbicide ,mowing ,nitrogen ,Environmental sciences ,GE1-350 - Abstract
Wetlands occupy a position in the landscape that makes them vulnerable to the effects of current land use and the legacies of past land use. Many wetlands in agricultural regions like the North American Midwest are strongly affected by elevated nutrient inputs as well as high rates of invasion by the hybrid cattail 'Typha' x 'glauca'. These two stressors also exacerbate each other: increased nutrients increase invasion success, and invasions increase nutrient retention and nutrient loads in the wetland. This interaction could create a positive feedback that would inhibit efforts to manage and control invasions, but little is known about the effects of past or present nutrient inputs on wetland invasive plant management. We augmented a previously-published community-ecosystem model (MONDRIAN) to simulate the most common invasive plant management tools: burning, mowing, and herbicide application. We then simulated different management strategies and 3 different durations in low and high nutrient input conditions, and found that the most effective management strategy and duration depends strongly on the amount of nutrients entering the wetland. In high-nutrient wetlands where invasions were most successful, a combination of herbicide and fire was most effective at reducing invasion. However, in low-nutrient wetlands this approach did little to reduce invasion. A longer treatment duration (6 years) was generally better than a 1-year treatment in high-nutrient wetlands, but was generally worse than the 1-year treatment in low-nutrient wetlands. At the ecosystem level, we found that management effects were relatively modest: there was little effect of management on ecosystem C storage, and while some management strategies decreased wetland nitrogen retention, this effect was transient and disappeared shortly after management ceased. Our results suggest that considering nutrient inputs in invaded wetlands can inform and improve management, and reducing nutrient inputs is an important component of an effective management strategy.
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- 2017
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7. Effect of the urbanized embayment Toronto Harbour on the composition and production of zooplankton
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Warren J. S. Currie and Kelly L. Bowen
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0106 biological sciences ,Biomass (ecology) ,Ecology ,biology ,010604 marine biology & hydrobiology ,Phosphorus ,fungi ,chemistry.chemical_element ,010501 environmental sciences ,Aquatic Science ,biology.organism_classification ,01 natural sciences ,Daphnia ,Zooplankton ,Nutrient ,chemistry ,Bosmina ,Phytoplankton ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences ,Trophic level - Abstract
To better understand zooplankton dynamics in Lake Ontario’s Toronto Harbour and adjacent coastal area (CA), we sampled zooplankton, phytoplankton, nutrients and physical parameters on six dates in 2016. Despite higher levels of nutrients, chlorophyll and primary production in the inner harbor (IH), the areas supported similar May to November zooplankton biomass (IH = 32 ± 7 and CA = 42 ± 10 mg/m3). IH values were much lower than other nutrient-enriched embayments in Lake Ontario, yet CA biomass was twice that of nearshore sites away from Toronto. Small zooplankton such as rotifers and Bosmina dominated IH; and large taxa (Daphnia, calanoids and predatory cladocerans) were more important in the CA. Daphnia, Bosmina, cyclopoids and calanoids were larger in the CA, and adult cyclopoids had higher egg ratios. This led to low annual IH production estimates for both cyclopoid and calanoid copepods. Total phosphorus and chlorophyll did not appear to regulate zooplankton biomass, but positive relationships were found with bacterial biomass in the IH and with temperature in the cool season. Atypically high fish planktivory rates likely suppressed larger IH zooplankton in 2016, allowing small, resilient Bosmina to flourish and contribute 84% of total production in the IH. Comparing 2016 data to previous zooplankton surveys revealed considerable inter-annual variation in proportions of Daphnia, Bosmina and predatory cladocerans over the 1994 to 2016 period, and the strong top-down controls observed in 2016 were not typical. Elevated microbial production may serve as an important alternate trophic pathway supporting cladoceran populations in Toronto Harbour.
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- 2021
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8. Effects of land markets and land management on ecosystem function: A framework for modelling exurban land-change.
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Derek T. Robinson, Shipeng Sun, Meghan Hutchins, Rick L. Riolo, Daniel G. Brown 0002, Dawn Cassandra Parker, Tatiana Filatova, William S. Currie, and Sarah Kiger
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- 2013
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9. Genetic Basis of Chlorsulfuron, Atrazine, and Mesotrione Resistance in a Palmer Amaranth (Amaranthus palmeri) Population
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Mithila Jugulam, Karthik Putta, Sridevi Nakka, Ivan Cuvaca, Chandrima Shyam, and Randall S. Currie
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education.field_of_study ,biology ,Resistance (ecology) ,Population ,Amaranth ,Plant Science ,biology.organism_classification ,Agricultural and Biological Sciences (miscellaneous) ,Mesotrione ,Amaranthus palmeri ,chemistry.chemical_compound ,chemistry ,Botany ,Atrazine ,education ,Agronomy and Crop Science ,Food Science - Abstract
A population of Palmer amaranth (Amaranthus palmeri S. Watson) in Kansas (KSR) was found to have evolved resistance to three commonly used herbicides, i.e., chlorsulfuron, atrazine, and mesotrione....
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- 2021
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10. Psychological distress and trauma during the COVID-19 pandemic: survey of doctors practising anaesthesia, intensive care medicine, and emergency medicine in the United Kingdom and Republic of Ireland
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Tom Roberts, Robert Hirst, Camilla Sammut-Powell, Charles Reynard, Jo Daniels, Daniel Horner, Mark D. Lyttle, Katie Samuel, Blair Graham, Michael J. Barrett, James Foley, John Cronin, Etimbuk Umana, Joao Vinagre, Edward Carlton, L. Kane, L. Mackenzie, S. Sharma Hajela, J. Phizacklea, K. Malik, N. Mathai, A. Sattout, S. Messahel, E. Fadden, R. McQuillan, B. O'Hare, S. Lewis, D. Bewick, R. Taylor, I. Hancock, D. Manthalapo Ramesh Babu, S. Hartshorn, M. Williams, A. Charlton, L. Somerset, C. Munday, A. Turner, R. Sainsbury, E. Williams, S. Patil, R. Stewart, M. Winstanley, N. Tambe, C. Magee, D. Raffo, D. Mawhinney, B. Taylor, T. Hussan, G. Pells, F. Barham, F. Wood, C. Szekeres, R. Greenhalgh, S. Marimuthu, R. Macfarlane, M. Alex, B. Shrestha, L. Stanley, J. Gumley, K. Thomas, M. Anderson, C. Weegenaar, J. Lockwood, T. Mohamed, S. Ramraj, M. Mackenzie, A. Robertson, W. Niven, M. Patel, S. Subramaniam, C. Holmes, S. Bongale, U. Bait, S. Nagendran, S. Rao, F. Mendes, P. Singh, T. Baron, C. Ponmani, M. Depante, R. Sneep, A. Brookes, S. Williams, A. Rainey, J. Brown, N. Marriage, S. Manou, S. Hart, M. Elsheikh, L. Cocker, M.H. Elwan, K.L. Vincent, C. Nunn, N. Sarja, M. Viegas, E. Wooffinden, C. Reynard, N. Cherian, A. Da-Costa, S. Duckitt, J. Bailey, L. How, T. Hine, F. Ihsan, H. Abdullah, K. Bader, S. Pradhan, M. Manoharan, L. Kehler, R. Muswell, M. Bonsano, J. Evans, E. Christmas, K. Knight, L. O'Rourke, K. Adeboye, K. Iftikhar, R. Evans, R. Darke, R. Freeman, E. Grocholski, K. Kaur, H. Cooper, M. Mohammad, L. Harwood, K. Lines, C. Thomas, D. Ranasinghe, S. Hall, J. Wright, N. Ali, J. Hunt, H. Ahmad, C. Ward, M. Khan, K. Holzman, J. Ritchie, A. Hormis, R. Hannah, A. Corfield, J. Maney, D. Metcalfe, S. Timmis, C. Williams, R. Newport, D. Bawden, A. Tabner, H. Malik, C. Roe, D. McConnell, F. Taylor, R. Ellis, S. Morgan, L. Barnicott, S. Foster, J. Browning, L. McCrae, E. Godden, A. Saunders, A. Lawrence-Ball, R. House, J. Muller, I. Skene, M. Lim, H. Millar, A. Rai, K. Challen, S. Currie, M. Elkanzi, T. Perry, W. Kan, L. Brown, M. Cheema, A. Clarey, A. Gulati, K. Webster, A. Howson, R. Doonan, A. Trimble, C. O’Connell, R. Wright, E. Colley, C. Rimmer, S. Pintus, H. Jarman, V. Worsnop, S. Collins, M. Colmar, N. Masood, R. McLatchie, A. Peasley, S. Rahman, N. Mullen, L. Armstrong, A. Hay, R. Mills, J. Lowe, H. Raybould, A. Ali, P. Cuthbert, S. Taylor, V. Talwar, Z. Al-Janabi, C. Leech, J. Turner, L. McKechnie, B. Mallon, J. McLaren, Y. Moulds, L. Dunlop, F.M. Burton, S. Keers, L. Robertson, D. Craver, N. Moultrie, O. Williams, S. Purvis, M. Clark, C. Davies, S. Foreman, C. Ngua, J. Morgan, N. Hoskins, J. Fryer, L. Frost, P. Ellis, A. Mackay, K. Gray, M. Jacobs, I. Musliam Veettil Asif, P. Amiri, S. Shrivastava, F. Raza, S. Wilson, M. Riyat, H. Knott, M. Ramazany, S. Langston, N. Abela, L. Robinson, D. Maasdorp, H. Murphy, H. Edmundson, R. Das, C. Orjioke, D. Worley, W. Collier, J. Everson, N. Maleki, A. Stafford, S. Gokani, M. Charalambos, A. Olajide, C. Bi, J. Ng, S. Naeem, A. Hill, C. Boulind, R. O'Sullivan, S. Gilmartin, S. Uí Bhroin, P. Fitzpatrick, A. Patton, M. Jee Poh Hock, S. Graham, S. Kukaswadia, C. Prendergast, A. Ahmed, C. Dalla Vecchia, J. Lynch, M. Grummell, I. Grossi, B. MacManus, P. Turton, C. Battle, K. Samuel, A. Boyle, A. Waite, D. George, B. Johnston, J. Anandarajah, and J. Vinagre
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Adult ,Male ,medicine.medical_specialty ,Critical Care ,Coronavirus disease 2019 (COVID-19) ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Psychological Distress ,Cohort Studies ,Stress Disorders, Post-Traumatic ,SDG 3 - Good Health and Well-being ,emergency medicine ,Physicians ,Surveys and Questionnaires ,Intensive care ,Pandemic ,medicine ,Humans ,Anesthesia ,Longitudinal Studies ,Prospective Studies ,Pandemics ,intensive care ,business.industry ,COVID-19 ,Psychological distress ,anaesthesia ,medicine.disease ,Mental health ,United Kingdom ,Anesthesiology and Pain Medicine ,Family medicine ,Emergency Medicine ,Female ,business ,psychological trauma ,Ireland ,mental health ,Cohort study ,Psychological trauma - Abstract
Received 12th May 2021. Accepted 17th May 2021. Published online 28th May 2021. Issue published 1st August 2021.
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- 2021
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11. Cross-resistance to atrazine and metribuzin in multiple herbicide-resistant kochia accessions: confirmation, mechanism, and management
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Randall S. Currie, Todd A. Gaines, Sarah Morran, Vipan Kumar, Prashant Jha, Phillip W. Stahlman, and Rui Liu
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0106 biological sciences ,Mechanism (biology) ,Herbicide resistant ,04 agricultural and veterinary sciences ,Plant Science ,Biology ,01 natural sciences ,chemistry.chemical_compound ,Agronomy ,chemistry ,Metribuzin ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries ,Atrazine ,Agronomy and Crop Science ,Cross-resistance ,010606 plant biology & botany - Abstract
Kochia accessions (designated as KS-4A and KS-4H) collected from a corn field near Garden City, KS, have previously shown multiple resistance to glyphosate, dicamba, and fluroxypyr. These accessions were also suspected as being resistant to photosystem II (PS II) inhibitors. The main objectives of this research were to 1) confirm the coexistence of cross-resistance to PS II inhibitors (atrazine and metribuzin) applied PRE and POST, 2) investigate the underlying mechanism of PS II-inhibitor resistance, and 3) determine the effectiveness of alternative POST herbicides for control of these multiple herbicide–resistant (MHR) kochia accessions. Results from dose-response experiments revealed that the KS-4A and KS-4H kochia accessions were 23-fold to 48-fold resistant to PRE- and POST-applied atrazine and 13-fold to 18-fold resistant to POST-applied metribuzin compared to a known susceptible kochia accession (KS-SUS). Both accessions also showed putative resistance to PRE-applied metribuzin that needs to be confirmed. Sequence analyses of the psbA gene further revealed that all samples from the KS-4A and KS-4H kochia accessions had a Ser264Gly point mutation. A pretreatment with malathion followed by a POST application of atrazine at 1,120 g ha−1 or metribuzin at 630 g ha−1 did not reverse the resistance phenotypes of these MHR accessions. In a separate greenhouse study, alternative POST herbicides, including bicyclopyrone + bromoxynil; bromoxynil + pyrasulfotole; paraquat alone or in combination with atrazine, metribuzin, 2,4-D, or saflufenacil; and saflufenacil alone or in combination with 2,4-D effectively controlled the KS-4H accession (≥97% injury). To our knowledge, this research reports the first case of kochia accessions with cross-resistance to PRE-applied atrazine and POST-applied metribuzin. Growers should adopt diversified weed control strategies, including the use of competitive crops, cover crops, targeted tillage, and harvest weed seed control along with effective alternative PRE and POST herbicides with multiple sites of action to control MHR kochia seedbanks on their production fields.
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- 2020
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12. Finding the hole in a wall
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S. Currie, M. Nowaczyk, and M. Archibald
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Physics ,Graphene ,Applied Mathematics ,Structure (category theory) ,Geometry ,General Chemistry ,Inverse problem ,law.invention ,Position (vector) ,law ,Vacancy defect ,Graph (abstract data type) ,Cartesian coordinate system ,Hexagonal tiling - Abstract
In this paper we model a graphene nano-ribbon structure by analysing an infinite 3-regular hexagonal grid which is transformed to a rectangular coordinate system or “wall”. Our goal is to solve the inverse problem of identifying the position of a single vacancy break using the lengths of the closed paths along the edges of the underlying graph. We provide an algorithm to determine the exact position of the defect by using data from at most three reference points.
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- 2020
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13. Characterization of Break in Quantum Grid
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S. Currie, M. Archibald, and M. Nowaczyk
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Physics ,General Physics and Astronomy ,Topology ,Grid ,Quantum ,Characterization (materials science) - Published
- 2020
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14. Factors Influencing the Probability of Hydraulic Fracturing-Induced Seismicity in Oklahoma
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Rosamiel Ries, Robert J. Skoumal, Michael R. Brudzinski, and Brian S. Currie
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Geophysics ,Hydraulic fracturing ,010504 meteorology & atmospheric sciences ,Geochemistry and Petrology ,Geotechnical engineering ,Induced seismicity ,010502 geochemistry & geophysics ,01 natural sciences ,Geology ,0105 earth and related environmental sciences - Abstract
Injection-induced seismicity became an important issue over the past decade, and although much of the rise in seismicity is attributed to wastewater disposal, a growing number of cases have identified hydraulic fracturing (HF) as the cause. A recent study identified regions in Oklahoma where ≥75% of seismicity from 2010 to 2016 correlated with nearly 300 HF wells. To identify factors associated with increased probability of induced seismicity, we gathered publicly available information about the HF operations in these regions including: injected volume, number of wells on a pad, injected fluid (gel vs. slickwater), vertical depth of the well, proximity of the well to basement rock, and the formation into which the injection occurred. To determine the statistical strength of the trends, we applied logistic regression, bootstrapping, and odds ratios. We see no trend with total injected volume in our Oklahoma dataset, in contrast to strong trends observed in Alberta and Texas, but we note those regions have many more multiwell pads leading to larger cumulative volumes within a localized area. We found a ∼50% lower probability of seismicity with the use of gel compared to slickwater. We found that HF wells targeting older formations had a higher probability of seismicity; however, these wells also tend to be deeper, and we found the trend with well depth to be stronger than the trend with age of formation. When isolated to the Woodford formation, well depth produced the strongest relationship, increasing from ∼5% to ∼50% probability from 1.5 to 5.5 km. However, no trend was seen in the proximity to basement parameter. Based on previously measured pore pressure gradients, we interpret the strong absolute depth relationship to be a result of the increasing formation overpressure measured in deeper portions of the basin that lower the stress change needed to induce seismicity.
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- 2020
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15. Reconsidering the uplift history and peneplanation of the northern Lhasa terrane, Tibet
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David B. Rowley, Miquela Ingalls, Brian S. Currie, and Albert S. Colman
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geography ,Plateau ,geography.geographical_feature_category ,010504 meteorology & atmospheric sciences ,Structural basin ,010502 geochemistry & geophysics ,Block (meteorology) ,01 natural sciences ,Peneplain ,Paleontology ,General Earth and Planetary Sciences ,Paleogene ,Global cooling ,Cenozoic ,Geology ,0105 earth and related environmental sciences ,Terrane - Abstract
The elevation history of the Tibetan Plateau promises insight into the mechanisms and dynamics that develop and sustain high topography over tens of millions of years, as well as the contribution of uplift-related erosive flux to Cenozoic global cooling. The elevation history of the center and northern margin of the plateau have been historically less well-constrained than the southern margin. A diverse suite of techniques, each with their own biases and uncertainties, yield discrepant mid-Cenozoic elevation estimates (0–5 km). We reconstruct Paleogene to Miocene elevations of the Lunpola basin on the northern Lhasa terrane, the southernmost crustal block of the Tibetan Plateau, using stable isotope paleoaltimetry and clumped-isotope paleothermometry on lacustrine and pedogenic carbonates, integrated with previously published compound-specific n-alkane-derived hydrogen isotopes. Paleo-elevation estimates for the Lunpola basin (∼3.1–4.7 km) demonstrate that the northern edge of the Lhasa Block attained high elevation prior to ∼24 Ma and potentially by the Early Eocene (
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- 2020
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16. Evolution of target and non-target based multiple herbicide resistance in a single Palmer amaranth (Amaranthus palmeri) population from Kansas
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Sushila Chaudhari, Mithila Jugulam, Randall S. Currie, Vijay K. Varanasi, Curtis R. Thompson, Dallas E. Peterson, Prasanta C. Bhowmik, and Sridevi Nakka
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education.field_of_study ,Acetolactate synthase ,Population ,EPSP synthase ,Amaranth ,Plant Science ,Gene mutation ,Biology ,biology.organism_classification ,Amaranthus palmeri ,Horticulture ,chemistry.chemical_compound ,chemistry ,Glyphosate ,biology.protein ,Atrazine ,education ,Agronomy and Crop Science - Abstract
The evolution of resistance to multiple herbicides in Palmer amaranth is a major challenge for its management. In this study, a Palmer amaranth population from Hutchinson, Kansas (HMR), was characterized for resistance to inhibitors of photosystem II (PSII) (e.g., atrazine), acetolactate synthase (ALS) (e.g., chlorsulfuron), and EPSP synthase (EPSPS) (e.g., glyphosate), and this resistance was investigated. About 100 HMR plants were treated with field-recommended doses (1×) of atrazine, chlorsulfuron, and glyphosate, separately along with Hutchinson multiple-herbicide (atrazine, chlorsulfuron, and glyphosate)–susceptible (HMS) Palmer amaranth as control. The mechanism of resistance to these herbicides was investigated by sequencing or amplifying the psbA, ALS, and EPSPS genes, the molecular targets of atrazine, chlorsulfuron, and glyphosate, respectively. Fifty-two percent of plants survived a 1× (2,240 g ai ha−1) atrazine application with no known psbA gene mutation, indicating the predominance of a non–target site resistance mechanism to this herbicide. Forty-two percent of plants survived a 1× (18 g ai ha−1) dose of chlorsulfuron with proline197serine, proline197threonine, proline197alanine, and proline197asparagine, or tryptophan574leucine mutations in the ALS gene. About 40% of the plants survived a 1× (840 g ae ha−1) dose of glyphosate with no known mutations in the EPSPS gene. Quantitative PCR results revealed increased EPSPS copy number (50 to 140) as the mechanism of glyphosate resistance in the survivors. The most important finding of this study was the evolution of resistance to at least two sites of action (SOAs) (~50% of plants) and to all three herbicides due to target site as well as non–target site mechanisms. The high incidence of individual plants with resistance to multiple SOAs poses a challenge for effective management of this weed.
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- 2020
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17. Immunochemical methods for identification of prey in freshwater zooplankton
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Kelly L. Bowen, David J. Gronquist, Warren J. S. Currie, John A. Berges, Craig D. Sandgren, Paul G. Engevold, and Nathaniel Thorngate‐Rein
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Freshwater zooplankton ,Zoology ,Ocean Engineering ,Identification (biology) ,Biology ,Predation - Published
- 2020
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18. Human appropriated net primary productivity as a metric for land use planning: a case study in the US Great Lakes region
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Erin M. Barton, William S. Currie, and Douglas R. Pearsall
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0106 biological sciences ,Sustainable development ,Ecology ,business.industry ,010604 marine biology & hydrobiology ,Geography, Planning and Development ,Environmental resource management ,Biodiversity ,Primary production ,Land-use planning ,Vegetation ,010603 evolutionary biology ,01 natural sciences ,Geography ,Habitat ,Spatial ecology ,Landscape ecology ,business ,Nature and Landscape Conservation - Abstract
Human appropriation of net primary productivity (HANPP) is employed as a measure of human pressures on biodiversity, though largely at global and national scales rather than landscape to regional scales where many conservation decisions take place. Though gaining in familiarity, HANPP is not widely utilized by conservation professionals. This study, encompassing the US side of the Great Lakes basin, examines how regional distributions of HANPP relate to landscape-based biodiversity proxy metrics used by conservation professionals. Our objectives were (1) to quantify the HANPP of managed lands at the county scale; and (2) to assess spatial patterns of HANPP in comparison to landscape diversity and local habitat connectedness to determine if the metric can provide useful information to conservation professionals. We aggregated forest and cropland NPP data between 2005 and 2015 and coupled it with previously published potential vegetation maps to quantify the HANPP of each county in the study region. We mapped the outputs at 500 m resolution to analyze spatial relationships between HANPP and landscape metrics of biodiversity potential. Area-weighted HANPP across our study region averaged 45% of NPP, down to 4.9% in forest-dominated counties. Greater HANPP correlated with reduced landscape diversity (p
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- 2020
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19. Forest structure, diversity, and primary production in relation to disturbance severity
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Shea B. Wales, Christopher M. Gough, Nicolás Correa Pascuas, Robert T. Fahey, William S. Currie, Lisa T. Haber, and Brady S. Hardiman
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0106 biological sciences ,Disturbance (geology) ,Biodiversity ,Functional response ,Biology ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,lcsh:QH540-549.5 ,disturbance severity ,Temperate climate ,Hardwood ,structure ,skin and connective tissue diseases ,Ecology, Evolution, Behavior and Systematics ,Original Research ,biodiversity ,030304 developmental biology ,Nature and Landscape Conservation ,function ,0303 health sciences ,Ecology ,Primary production ,Species diversity ,Vegetation ,lcsh:Ecology ,sense organs ,complexity ,primary production - Abstract
Differential disturbance severity effects on forest vegetation structure, species diversity, and net primary production (NPP) have been long theorized and observed. Here, we examined these factors concurrently to explore the potential for a mechanistic pathway linking disturbance severity, changes in light environment, leaf functional response, and wood NPP in a temperate hardwood forest.Using a suite of measurements spanning an experimental gradient of tree mortality, we evaluated the direction and magnitude of change in vegetation structural and diversity indexes in relation to wood NPP. Informed by prior observations, we hypothesized that forest structural and species diversity changes and wood NPP would exhibit either a linear, unimodal, or threshold response in relation to disturbance severity. We expected increasing disturbance severity would progressively shift subcanopy light availability and leaf traits, thereby coupling structural and species diversity changes with primary production.Linear or unimodal changes in three of four vegetation structural indexes were observed across the gradient in disturbance severity. However, disturbance‐related changes in vegetation structure were not consistently correlated with shifts in light environment, leaf traits, and wood NPP. Species diversity indexes did not change in response to rising disturbance severity.We conclude that, in our study system, the sensitivity of wood NPP to rising disturbance severity is generally tied to changing vegetation structure but not species diversity. Changes in vegetation structure are inconsistently coupled with light environment and leaf traits, resulting in mixed support for our hypothesized cascade linking disturbance severity to wood NPP., We examined multiple metrics of vegetation structural and biological diversity concurrently to explore the potential for a mechanistic pathway linking disturbance severity, changes in light environment, leaf functional response, and wood NPP in a temperate hardwood forest. Significant linear or unimodal changes in three of four vegetation structural indexes were observed across the gradient in disturbance severity, although disturbance‐related changes in vegetation structure were not consistently correlated with shifts in light environment, leaf traits, and wood NPP. We conclude that, in our study system, the sensitivity of wood NPP to rising disturbance severity is generally tied to changing vegetation structure but not species diversity.
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- 2020
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20. From Haphazard to a Sustainable Normothermic Regional Perfusion Service: A Blueprint for the Introduction of Novel Perfusion Technologies
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Fiona Hunt, Chris J. C. Johnston, Lesley Coutts, Ahmed E. Sherif, Lynsey Farwell, Ben M. Stutchfield, Avi Sewpaul, Andrew Sutherland, Benoy I. Babu, Ian S. Currie, and Gabriel C. Oniscu
- Subjects
Death ,Perfusion ,Transplantation ,Tissue and Organ Procurement ,Humans ,Transplants ,Organ Preservation ,Tissue Donors ,Liver Transplantation - Abstract
Normothermic Regional Perfusion (NRP) has shown encouraging clinical results. However, translation from an experimental to routine procedure poses several challenges. Herein we describe a model that led to the implementation of NRP into standard clinical practice in our centre following an iterative process of refinement incorporating training, staffing and operative techniques. Using this approach we achieved a four-fold increase in trained surgical staff and a 6-fold increase in competent senior organ preservation practitioners in 12 months, covering 93% of the retrieval calls. We now routinely provide NRP throughout the UK and attended 186 NRP retrievals from which 225 kidneys, 26 pancreases and 61 livers have been transplanted, including 5 that were initially declined by all UK transplant centres. The 61 DCD(NRP) liver transplants undertaken exhibited no primary non-function or ischaemic cholangiopathy with up to 8 years of follow-up. This approach also enabled successful implementation of ex situ normothermic liver perfusion which together with NRP contributed 37.5% of liver transplant activity in 2021. Perfusion technologies (in situ and ex situ) are now supported by a team of Advanced Perfusion and Organ Preservation Specialists. The introduction of novel perfusion technologies into routine clinical practice presents significant challenges but can be greatly facilitated by developing a specific role of Advanced Perfusion and Organ Preservation Specialist supported by a robust education, training and recruitment programme.
- Published
- 2022
21. Industrial Weed Control with Plainview, Esplanade, and Method Application Timings
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R. S. Currie and P. W. Geier
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Computer Networks and Communications ,Hardware and Architecture ,Software - Published
- 2022
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22. Single and Split Herbicide Applications for Efficacy in Corn
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R. S. Currie and P. W. Geier
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Computer Networks and Communications ,Hardware and Architecture ,Software - Published
- 2022
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23. FirstAct for Efficacy in ACCase-Tolerant Grain Sorghum
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R. S. Currie and P. W. Geier
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Computer Networks and Communications ,Hardware and Architecture ,Software - Published
- 2022
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24. Pyraflufen Tank Mixtures for Efficacy in Fallow
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R. S. Currie and P. W. Geier
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Computer Networks and Communications ,Hardware and Architecture ,Software - Published
- 2022
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25. Katagon at Two Timings Compared to Standards in Corn
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R. S. Currie and P. W. Geier
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Computer Networks and Communications ,Hardware and Architecture ,Software - Published
- 2022
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26. 36P Therapeutic vaccination with HPV-16 oncoproteins fused into a checkpoint modifier of early T cell activation protects against HPV-associated tumors in a preclinical model
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S. Currie, X. Zhou, Z. Xiang, W. Giles-Davis, A. Luber, M. Mohammadi, and H. Ertl
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Cancer Research ,Oncology - Published
- 2023
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27. Building a Worldwide Freshwater Zooplankton Dataset to Synthesize Patterns of Zooplankton Community Structure and Change
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Stephanie E. Figary, Michael F. Meyer, Warren J. S. Currie, and ZIG Participants
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Aquatic Science ,Oceanography ,Water Science and Technology - Published
- 2022
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28. Application of imaging spectroscopy to mapping canopy nitrogen in the forests of the central Appalachian Mountains using Hyperion and AVIRIS.
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Philip A. Townsend, Jane R. Foster, Robert A. Chastain Jr., and William S. Currie
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- 2003
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29. Assessing beech bark-diseased forest canopies over landscapes using high resolution open-source imagery in an ecological framework
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Jared W. Barnett, Kathleen M. Bergen, and William S. Currie
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Forestry ,Management, Monitoring, Policy and Law ,Nature and Landscape Conservation - Published
- 2022
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30. Sustained‐Flux Global Warming Potential Driven by Nitrogen Inflow and Hydroperiod in a Model of Great Lakes Coastal Wetlands
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Kenneth J. Elgersma, Y. Yuan, Sean J. Sharp, William S. Currie, and Jason P. Martina
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Atmospheric Science ,geography ,geography.geographical_feature_category ,Ecology ,Global warming ,Paleontology ,Soil Science ,Flux ,chemistry.chemical_element ,Forestry ,Wetland ,Inflow ,Aquatic Science ,Atmospheric sciences ,Nitrogen ,Methane ,chemistry.chemical_compound ,chemistry ,Ecosystem model ,Greenhouse gas ,Environmental science ,Water Science and Technology - Published
- 2021
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31. The Lake Erie HABs Grab: A binational collaboration to characterize the western basin cyanobacterial harmful algal blooms at an unprecedented high-resolution spatial scale
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Warren J. S. Currie, John F. Bratton, Arthur Zastepa, Ken G. Drouillard, Gregory J. Dick, Laura A. Reitz, Jorge W. Santo Domingo, Keara Stanislawczyk, Hugh J. MacIsaac, Reagan M. Errera, Justin D. Chaffin, Thomas B. Bridgeman, Halli B. Bair, Xuexiu Chang, Johnna A. Birbeck, Judy A. Westrick, Andrew McClure, Edward M. Verhamme, Xing Zhou, Colleen E. Yancey, Timothy W. Davis, Richard P. Stumpf, Caren Binding, Brenda K. Snyder, Thijs Frenken, Jill Crossman, R. Michael L. McKay, Zachary D. Swan, Pengfei Xue, and Amber A. Beecher
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chemistry.chemical_classification ,Microcystis ,biology ,Harmful Algal Bloom ,Phosphorus ,Plant Science ,Microcystin ,Aquatic Science ,biology.organism_classification ,Cyanobacteria ,Algal bloom ,Article ,chemistry.chemical_compound ,Lakes ,Oceanography ,chemistry ,Chlorophyll ,Environmental monitoring ,Environmental science ,Bloom ,Eutrophication ,Chlorophyll fluorescence - Abstract
Monitoring of cyanobacterial bloom biomass in large lakes at high resolution is made possible by remote sensing. However, monitoring cyanobacterial toxins is only feasible with grab samples, which, with only sporadic sampling, results in uncertainties in the spatial distribution of toxins. To address this issue, we conducted two intensive “HABs Grabs” of microcystin (MC)-producing Microcystis blooms in the western basin of Lake Erie. These were one-day sampling events during August of 2018 and 2019 in which 100 and 172 grab samples were collected, respectively, within a six-hour window covering up to 2,270 km2 and analyzed using consistent methods to estimate the total mass of MC. The samples were analyzed for 57 parameters, including toxins, nutrients, chlorophyll, and genomics. There were an estimated 11,513 kg and 30,691 kg of MCs in the western basin during the 2018 and 2019 HABs Grabs, respectively. The bloom boundary poses substantial issues for spatial assessments because MC concentration varied by nearly two orders of magnitude over very short distances. The MC to chlorophyll ratio (MC:chl) varied by a factor up to 5.3 throughout the basin, which creates challenges for using MC:chl to predict MC concentrations. Many of the biomass metrics strongly correlated (r > 0.70) with each other except chlorophyll fluorescence and phycocyanin concentration. While MC and chlorophyll correlated well with total phosphorus and nitrogen concentrations, MC:chl correlated with dissolved inorganic nitrogen. More frequent MC data collection can overcome these issues, and models need to account for the MC:chl spatial heterogeneity when forecasting MCs.
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- 2021
32. Quality of Life Outcomes After Stereotactic Ablative Radiation Therapy (SABR) Versus Standard of Care Treatments in the Oligometastatic Setting: A Secondary Analysis of the SABR-COMET Randomized Trial
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Stephen Harrow, Andrew Warner, David A. Palma, Stewart Gaede, Karen Moore, Alexander V. Louie, Cornelis J.A. Haasbeek, Anand Swaminath, Liam Mulroy, Neil Kopek, Gwendolyn H.M.J. Griffioen, Devin Schellenberg, Glenn Bauman, Michael Lock, Sashendra Senthi, Mitchell Liu, George Rodrigues, Brian Yaremko, Robert Olson, Belal Ahmad, Suresh Senan, S. Currie, Radiation Oncology, and CCA - Cancer Treatment and quality of life
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Adult ,Male ,Oncology ,Cancer Research ,medicine.medical_specialty ,Time Factors ,medicine.medical_treatment ,Radiosurgery ,SABR volatility model ,030218 nuclear medicine & medical imaging ,law.invention ,03 medical and health sciences ,0302 clinical medicine ,Quality of life ,Randomized controlled trial ,law ,Internal medicine ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Neoplasm Metastasis ,Aged ,Aged, 80 and over ,Radiation ,Performance status ,business.industry ,Standard of Care ,Middle Aged ,medicine.disease ,Primary tumor ,humanities ,Clinical trial ,Radiation therapy ,030220 oncology & carcinogenesis ,Quality of Life ,Female ,business - Abstract
Purpose: Randomized data assessing the longitudinal quality of life (QoL) impact of stereotactic ablative radiation therapy (SABR) in the oligometastatic setting are lacking. Methods and Materials: We enrolled patients who had a controlled primary malignancy with 1 to 5 metastatic lesions, with good performance status and life expectancy >6 months. We randomized in a 1:2 ratio between standard of care (SOC) treatment (SOC arm) and SOC plus SABR to all metastatic lesions (SABR arm). QoL was measured using the Functional Assessment of Cancer Therapy–General. QoL changes over time and between groups were assessed with linear mixed modeling. Results: Ninety-nine patients were randomized. Median age was 68 years (range, 43-89), and 60% were male. The most common primary tumor types were breast (n = 18), lung (n = 18), colorectal (n = 18), and prostate (n = 16). Most patients (n = 92) had 1 to 3 metastases. Median follow-up was 26 months. Because of the previously reported inferior survival of the SOC arm, the time for attrition in QoL respondents to
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- 2019
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33. Hydraulic Fracture Injection Strategy Influences the Probability of Earthquakes in the Eagle Ford Shale Play of South Texas
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Michael R. Brudzinski, Kevin J. Smart, Robert J. Skoumal, Teresa Langenkamp, Brian S. Currie, and Shannon L. Fasola
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Eagle ,Geophysics ,Hydraulic fracturing ,Mining engineering ,biology ,biology.animal ,Fracture (geology) ,General Earth and Planetary Sciences ,Induced seismicity ,Oil shale ,Geology - Published
- 2019
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34. Increased Absorption and Translocation Contribute to Improved Efficacy of Dicamba to Control Early Growth Stage Palmer amaranth (Amaranthus palmeri)
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Mithila Jugulam, Kraig L. Roozeboom, Ivan Cuvaca, Jack Fry, and Randall S. Currie
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0106 biological sciences ,biology ,Chromosomal translocation ,Amaranth ,04 agricultural and veterinary sciences ,Plant Science ,Absorption (skin) ,biology.organism_classification ,01 natural sciences ,Effective dose (pharmacology) ,Amaranthus palmeri ,010602 entomology ,chemistry.chemical_compound ,Animal science ,chemistry ,Dicamba ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries ,Weed ,Agronomy and Crop Science ,Field conditions - Abstract
Rapid growth of Palmer amaranth (Amaranthus palmeri S. Watson) poses a challenge for timely management of this weed. Dose response studies were conducted in 2017 and 2018 under field and greenhouse conditions near Garden City and Manhattan, KS, respectively, to evaluate the efficacy of dicamba to control ≤10 cm, 15 cm, and 30 cm tall-Palmer amaranth that mimics three herbicide application timing: on time application (Day 0), and 1 (Day 1) and 4 days (Day 4) delay. Visual injury rating and reduction in shoot biomass (% of non-treated), and mortality were assessed at four weeks after treatment using a three- and four-parameter log-logistic model, in R software program. Increasing dicamba doses increased A. palmeri control regardless of plant height both in the field and greenhouse studies. The results suggest that delaying application one (15 cm) and four days (30 cm), resulted in a two- and 27-fold increase in the effective dose of dicamba on A. palmeri, respectively, under field conditions. However, in the greenhouse, for the same level of A. palmeri control, more than one- and two-fold increase in dicamba dose, respectively was required. Similarly, the effective dose of dicamba required for 50% reduction in A. palmeri shoot biomass (GR50) increased more than four- and eight-fold or more than one- and two-fold when dicamba application was delayed by one (15 cm) and four days (30 cm), in the field or in the greenhouse, respectively. To understand the basis of increased efficacy of dicamba in controlling early growth stage of A. palmeri, dicamba absorption and translocation studies were conducted. Results indicate a significant reduction in dicamba absorption (7%) and translocation (15%) with increase in A. palmeri height. Therefore, increased absorption and translocation of dicamba results in increased efficacy in improving A. palmeri control at early growth stage.
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- 2019
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35. Satellite-based decadal change assessments of pan-Arctic environments
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Danielle Tanzer, Jason J. Taylor, Tom Barry, Karl R. Bosse, Sara Longan, Liza K. Jenkins, Thomas Kjær Christensen, William S. Currie, and Robert A. Shuchman
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Time series ,010504 meteorology & atmospheric sciences ,Geography, Planning and Development ,0211 other engineering and technologies ,Biodiversity ,02 engineering and technology ,01 natural sciences ,Normalized Difference Vegetation Index ,Arctic ,Snow ,Environmental Chemistry ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,Terrestrial Biodiversity in a Rapidly Changing Arctic ,Ecology ,Temperature ,General Medicine ,Remote sensing ,Monitoring program ,Sea surface temperature ,Colored dissolved organic matter ,MODIS ,Satellite ,Environmental science ,Terrestrial ecosystem ,Seasons ,Physical geography - Abstract
Remote sensing can advance the work of the Circumpolar Biodiversity Monitoring Program through monitoring of satellite-derived terrestrial and marine physical and ecological variables. Standardized data facilitate an unbiased comparison across variables and environments. Using MODIS standard products of land surface temperature, percent snow covered area, NDVI, EVI, phenology, burned area, marine chlorophyll, CDOM, sea surface temperature, and marine primary productivity, significant trends were observed in almost all variables between 2000 and 2017. Analysis of seasonal data revealed significant breakpoints in temporal trends. Within the terrestrial environment, data showed significant increasing trends in land surface temperature and NDVI. In the marine environment, significant increasing trends were detected in primary productivity. Significantly earlier onset of green up date was observed in bioclimate subzones C&E and longer end of growing season in B&E. Terrestrial and marine parameters showed similar rates of change with unidirectional change in terrestrial and significant directional and magnitude shifts in marine. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s13280-019-01249-z) contains supplementary material, which is available to authorized users.
- Published
- 2019
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36. Prediction of outcome in anal squamous cell carcinoma using radiomic feature analysis of pre-treatment FDG PET-CT
- Author
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David Sebag-Montefiore, R. Frood, Alexandra Gilbert, Ane L Appelt, Jim Zhong, Peter Brown, Andrew Scarsbrook, and S. Currie
- Subjects
Pre treatment ,medicine.medical_specialty ,business.industry ,Incidence (epidemiology) ,Anal Squamous Cell Carcinoma ,General Medicine ,Outcome prediction ,Logistic regression ,FDG-PET/CT ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Anal squamous cell carcinoma (ASCC) ,Radiomic feature analysis ,030220 oncology & carcinogenesis ,Cohort ,medicine ,Radiology, Nuclear Medicine and imaging ,Fdg pet ct ,Original Article ,Radiology ,Stage (cooking) ,business ,Chemoradiotherapy - Abstract
Purpose Incidence of anal squamous cell carcinoma (ASCC) is increasing, with curative chemoradiotherapy (CRT) as the primary treatment of non-metastatic disease. A significant proportion of patients have locoregional treatment failure (LRF), but distant relapse is uncommon. Accurate prognostication of progression-free survival (PFS) would help personalisation of CRT regimens. The study aim was to evaluate novel imaging pre-treatment features, to prognosticate for PFS in ASCC. Methods Consecutive patients with ASCC treated with curative intent at a large tertiary referral centre who underwent pre-treatment FDG-PET/CT were included. Radiomic feature extraction was performed using LIFEx software on baseline FDG-PET/CT. Outcome data (PFS) was collated from electronic patient records. Elastic net regularisation and feature selection were used for logistic regression model generation on a randomly selected training cohort and applied to a validation cohort using TRIPOD guidelines. ROC-AUC analysis was used to compare performance of a regression model encompassing standard clinical prognostic factors (age, sex, tumour and nodal stage—model A), a radiomic feature model (model B) and a combined radiomic/clinical model (model C). Results A total of 189 patients were included in the study, with 145 in the training cohort and 44 in the validation cohort. Median follow-up was 35.1 and 37. 9 months, respectively for each cohort, with 70.3% and 68.2% reaching this time-point with PFS. GLCM entropy (a measure of randomness of distribution of co-occurring pixel grey-levels), NGLDM busyness (a measure of spatial frequency of changes in intensity between nearby voxels of different grey-level), minimum CT value (lowest HU within the lesion) and SMTV (a standardized version of MTV) were selected for inclusion in the prognostic model, alongside tumour and nodal stage. AUCs for performance of model A (clinical), B (radiomic) and C (radiomic/clinical) were 0.6355, 0.7403, 0.7412 in the training cohort and 0.6024, 0.6595, 0.7381 in the validation cohort. Conclusion Radiomic features extracted from pre-treatment FDG-PET/CT in patients with ASCC may provide better PFS prognosis than conventional staging parameters. With external validation, this might be useful to help personalise CRT regimens in the future. Electronic supplementary material The online version of this article (10.1007/s00259-019-04495-1) contains supplementary material, which is available to authorized users.
- Published
- 2019
37. Small-molecule agents for the treatment of inflammatory bowel disease
- Author
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Sedillo Kassandra F, Leena Patel, and Kevin S. Currie
- Subjects
medicine.medical_specialty ,Clinical Biochemistry ,Pharmaceutical Science ,Safety margin ,01 natural sciences ,Biochemistry ,Inflammatory bowel disease ,Crohn Disease ,Gastrointestinal Agents ,Quality of life ,Drug Discovery ,medicine ,Animals ,Humans ,Intensive care medicine ,Protein Kinase Inhibitors ,Molecular Biology ,Crohn's disease ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,medicine.disease ,Ulcerative colitis ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,Molecular Medicine ,Colitis, Ulcerative ,Signal Transduction - Abstract
Inflammatory bowel disease (IBD) is a chronic, debilitating condition with a significant impact on quality of life. In spite of recent advances with antibody therapies, there remains a significant unmet medical need in IBD. Ongoing research and development efforts aim to identify new therapies that will increase remission rates beyond those achieved with current standard-of-care, while maintaining a high safety margin. This review will provide an overview of the small-molecule agents that are being explored in this regard.
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- 2019
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38. Diagenesis of shallowly buried Miocene lacustrine carbonates from the Hoh Xil Basin, northern Tibetan Plateau: Implications for stable-isotope based elevation estimates
- Author
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Longwei Qiu, David B. Rowley, Zhenhan Wu, Shanying Li, Brian S. Currie, and Miquela Ingalls
- Subjects
Calcite ,010506 paleontology ,Recrystallization (geology) ,Stable isotope ratio ,Stratigraphy ,Geochemistry ,Geology ,010502 geochemistry & geophysics ,01 natural sciences ,Isotopes of oxygen ,Diagenesis ,Petrography ,chemistry.chemical_compound ,chemistry ,Meteoric water ,Carbonate ,0105 earth and related environmental sciences - Abstract
The oxygen isotopic composition of lacustrine carbonate deposits has been frequently used to reconstruct paleoaltimetry of orogenic belts. However, the primary oxygen isotopic composition of lacustrine carbonate can be partially or wholly altered by post-depositional diagenetic processes, such as deep burial recrystallization and the interaction with geologically younger meteoric waters. To better understand how ancient lacustrine carbonates are diagenetically modified by meteoric waters, we present detailed mineralogy, petrography, stable carbon and oxygen isotopic compositions, and major and minor element geochemistry of lacustrine carbonates from the Miocene Wudaoliang Group, which underwent only shallow burial (
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- 2019
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39. Stereotactic ablative radiotherapy versus standard of care palliative treatment in patients with oligometastatic cancers (SABR-COMET)
- Author
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Stephen Harrow, Sashendra Senthi, Mitchell Liu, Liam Mulroy, Belal Ahmad, Michael Lock, Gwendolyn H.M.J. Griffioen, Karen Moore, George Rodrigues, Cornelis J.A. Haasbeek, Anand Swaminath, Glenn Bauman, Devin Schellenberg, Brian Yaremko, Stewart Gaede, Robert Olson, Alexander V. Louie, Andrew Warner, Suresh Senan, David A. Palma, S. Currie, Neil Kopek, Radiation Oncology, and CCA - Cancer Treatment and quality of life
- Subjects
medicine.medical_specialty ,Palliative care ,business.industry ,Hazard ratio ,Phases of clinical research ,General Medicine ,030204 cardiovascular system & hematology ,SABR volatility model ,law.invention ,Clinical trial ,03 medical and health sciences ,0302 clinical medicine ,Randomized controlled trial ,law ,Internal medicine ,Clinical endpoint ,Medicine ,030212 general & internal medicine ,business ,Survival analysis - Abstract
Background: The oligometastatic paradigm suggests that some patients with a limited number of metastases might be cured if all lesions are eradicated. Evidence from randomised controlled trials to support this paradigm is scarce. We aimed to assess the effect of stereotactic ablative radiotherapy (SABR) on survival, oncological outcomes, toxicity, and quality of life in patients with a controlled primary tumour and one to five oligometastatic lesions. Methods: This randomised, open-label phase 2 study was done at 10 hospitals in Canada, the Netherlands, Scotland, and Australia. Patients aged 18 or older with a controlled primary tumour and one to five metastatic lesions, Eastern Cooperative Oncology Group score of 0–1, and a life expectancy of at least 6 months were eligible. After stratifying by the number of metastases (1–3 vs 4–5), we randomly assigned patients (1:2) to receive either palliative standard of care treatments alone (control group), or standard of care plus SABR to all metastatic lesions (SABR group), using a computer-generated randomisation list with permuted blocks of nine. Neither patients nor physicians were masked to treatment allocation. The primary endpoint was overall survival. We used a randomised phase 2 screening design with a two-sided α of 0·20 (wherein p
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- 2019
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40. Dicamba-resistant kochia (Bassia scoparia) in Kansas: characterization and management with fall- or spring-applied PRE herbicides
- Author
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Randall S. Currie, Ryan P. Engel, Phillip W. Stahlman, Vipan Kumar, Curtis R. Thompson, and Prashant Jha
- Subjects
Plant Science ,Crop rotation ,Biology ,Bassia scoparia ,biology.organism_classification ,Summer fallow ,chemistry.chemical_compound ,Pendimethalin ,Agronomy ,chemistry ,Metribuzin ,Dicamba ,Sulfentrazone ,Atrazine ,Agronomy and Crop Science - Abstract
Dicamba-resistant (DR) kochia is an increasing concern for growers in the US Great Plains, including Kansas. Greenhouse and field experiments (Garden City and Tribune, KS, in the 2014 to 2015 growing season) were conducted to characterize the dicamba resistance levels in two recently evolved DR kochia accessions collected from fallow fields (wheat–sorghum–fallow rotation) near Hays, KS, and to determine the effectiveness of various PRE herbicide tank mixtures applied in fall or spring prior to the fallow year. Dicamba dose–response studies indicated that the KS-110 and KS-113 accessions had 5- to 8-fold resistance to dicamba, respectively, relative to a dicamba-susceptible (DS) accession. In separate field studies, atrazine-based PRE herbicide tank mixtures, dicamba + pendimethalin + sulfentrazone, and metribuzin + sulfentrazone when applied in the spring had excellent kochia control (85% to 95%) for 3 to 4 mo at the Garden City and Tribune sites. In contrast, kochia control with those PRE herbicide tank mixtures when applied in the fall did not exceed 79% at the later evaluation dates. In conclusion, the tested kochia accessions from western Kansas had evolved moderate to high levels of resistance to dicamba. Growers should utilize these effective PRE herbicide tank mixtures (multiple sites of action) in early spring to manage kochia seed bank during the summer fallow phase of this 3-yr crop rotation (wheat–corn/sorghum–fallow) in the Central Great Plains.
- Published
- 2019
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41. First Report of Kochia (Bassia scoparia) with Cross-Resistance to Dicamba and Fluroxypyr in Western Kansas
- Author
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Prashant Jha, Phillip W. Stahlman, Vipan Kumar, and Randall S. Currie
- Subjects
Plant Science ,Crop rotation ,Biology ,Bassia scoparia ,biology.organism_classification ,chemistry.chemical_compound ,Horticulture ,chemistry ,Dry weight ,Glyphosate ,Shoot ,Dicamba ,Cover crop ,Agronomy and Crop Science ,Fluroxypyr - Abstract
Evolution and rapid spread of herbicide-resistant (HR) kochia has become a significant challenge for growers in the U.S. Great Plains. The main objectives of this research were to confirm and characterize the response of putative auxinic HR (Aux-HR) kochia accessions (designated as KS-4A, KS-4D, KS-4H, KS-10A, KS-10-G, and KS-10H) collected from two different corn fields near Garden City, KS, to dicamba and fluroxypyr and to determine the EPSPS gene copy number to detect whether those accessions were also resistant to glyphosate. Single-dose experiments indicated that putative Aux-HR kochia accessions had 78% to 100% and 85% to 100% survivors when treated with dicamba (560 g ae ha−1) and fluroxypyr (235 g ae ha−1), respectively. Whole-plant dicamba dose–response studies revealed that the selected Aux-HR accessions had 2.9- to 15.1- and 3.1- to 9.4-fold resistance to dicamba relative to two susceptible accessions (MT-SUS and KS-SUS). In a separate fluroxypyr dose–response experiment, the selected Aux-HR accessions also exhibited 3.8- to 7.3- and 3.0- to 8.6-fold resistance to fluroxypyr on the basis of shoot fresh and dry weight responses, respectively. The confirmed Aux-HR kochia accessions also had 3 to 13 EPSPS gene copies relative to MT-SUS and KS-SUS accessions (each with 1 EPSPS gene copy). These results suggest that the putative Aux-HR kochia accessions from Kansas had developed moderate to high levels of cross-resistance to dicamba and fluroxypyr and low to high levels of resistance to glyphosate. This is the first confirmation of kochia accessions with cross-resistance to dicamba and fluroxypyr in Kansas. Growers should use diverse kochia control programs, including the proper use of dicamba and fluroxypyr stewardship, use of cover crops, occasional tillage, diversified crop rotations, and alternative effective herbicides to prevent further evolution and spread of Aux-HR kochia on their fields.
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- 2019
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42. Massive middle Miocene gypsic paleosols in the Atacama Desert and the formation of the Central Andean rain-shadow
- Author
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Rodrigo Riquelme, Shanying Li, Naomi E. Kirk-Lawlor, Teresa E. Jordan, Jared T. Gooley, Brian S. Currie, Jason A. Rech, and Sophie B. Lehmann
- Subjects
010504 meteorology & atmospheric sciences ,Geochemistry ,Vegetation ,Late Miocene ,Rain shadow ,010502 geochemistry & geophysics ,01 natural sciences ,Paleosol ,Arid ,Isotopes of oxygen ,chemistry.chemical_compound ,Geophysics ,chemistry ,Space and Planetary Science ,Geochemistry and Petrology ,Earth and Planetary Sciences (miscellaneous) ,Carbonate ,Southern Hemisphere ,Geology ,0105 earth and related environmental sciences - Abstract
The Central Andes of South America are one of the highest and broadest mountain ranges on earth and have a profound influence on climate in the Southern Hemisphere. Yet, the timing of Andean uplift and its subsequent impact on atmospheric circulation is not well known. Here we use fossil soils from along an 800-km transect (19–25°S) in the Atacama Desert of northern Chile to identify the initiation of extreme aridity along the west coast of South America and infer a minimum age for the development of the Central Andean rain-shadow. Paleosols record the onset of extreme aridity at the boundary between the middle and late Miocene (12–10 Ma). Lower Miocene (24–20 Ma) soils are chemically weathered and contain soil carbonate, indicative of a vegetated landscape and semi-arid climate. In contrast, gypsum dominates massive (2–5 m thick) upper middle Miocene soils that formed on a hyperarid landscape devoid of vegetation. The development of extreme hyperaridity is linked to the formation of the Central Andean rain-shadow through the divergence of oxygen isotope values. Oxygen isotope values of lower Miocene soil carbonates in the Atacama Desert ( − 5.0 ± 1.1 ‰ VPDB) and Central Andes ( − 7.8 ± 1 ‰ ) are similar, indicating no or a limited rain-shadow. By 15 Mya, however, δ 18 O values of soil carbonate differ by ∼8‰, with values of soil carbonate in Altiplano paleosols getting lower due to uplift while soil carbonate values in the Atacama Desert get higher due to aridity. Therefore, by 15 Mya there is clear evidence for a rain-shadow from the Central Andes. By the latest middle Miocene (ca. 12–10 Ma), paleosols in the Altiplano decreased to − 11.8 ± 1.0 ‰ while soils in the Atacama Desert increase to + 1.5 ± 4.5 ‰ . This almost 14‰ divergence in the δ 18 O values of soil carbonate for soils only ∼250 km apart is evidence of a strong Central Andes rain-shadow effect in place during the late middle Miocene (12–10 Ma).
- Published
- 2019
- Full Text
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43. P15.04.B Serial18F-fluciclovine PET-CT and multiparametric MRI during chemoradiation for glioblastoma - an exploratory clinical study with pre-clinical correlation
- Author
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K Fatania, S Fernandez, G C Shaw, D Salvatore, I Teh, J E Schneider, L Murray, A F Scarsbrook, S C Short, and S Currie
- Subjects
Cancer Research ,Oncology ,Neurology (clinical) - Abstract
Background Positron emission tomography (PET) using anti-1-amino-3-18fluorine-fluorocyclobutane-1-carboxylic acid (18F-fluciclovine) shows preferential glioma cell uptake with low activity in normal brain. Dynamic contrast-enhanced (DCE) MRI may also be used to investigate regions of glioma that do not show gadolinium-enhancement on post-contrast T1-weighted MR sequences (Gd-T1) and may reflect tumour infiltration beyond the Gd-T1 enhancing margin. There is a paucity of data on how 18F-fluciclovine uptake correlates with Gd-T1 and DCE-MRI activity, how it correlates with tumour biology and whether significant changes in uptake occur during treatment. The aims of this pilot study were: 1 To compare 18F-fluciclovine PET, DCE-MRI and Gd-T1 in patients undergoing chemoradiotherapy for glioblastoma (GBM) 2 To investigate correlation between 18F-fluciclovine uptake, MRI findings, and tumour biology in a pre-clinical glioma model. Material and Methods 18F-fluciclovine-PET-CT and MRI including DCE-MRI were acquired before, during and after adjuvant chemoradiotherapy (60 Gy in 30 fractions with temozolomide) in GBM patients. DCE-MRI and Gd-T1 volumes were manually contoured, and PET volumes defined using semi-automatic thresholding. Gd-T1 was subtracted from PET and DCE-MRI volumes to identify areas beyond the Gd-T1 volume boundary and similarity of the PET and DCE-MRI volumes outside the Gd-T1 volume boundary were measured using the Dice similarity coefficient (DSC). CT-2A tumour cells were stereotactically injected into the right striatum of 8 to 10-week-old C57BL6J mice and they underwent MRI and 18F-fluciclovine PET-CT. Post-mortem mice brains underwent immunohistochemistry staining for ASCT2 (amino acid transporter), nestin (stemness) and Ki-67 (proliferation) to assess for biologically active tumour. Results 6 patients were recruited (GBM 1-6). For GBM 1-3: PET volumes were greater than DCE-MRI, in turn greater than Gd-T1. For GBM 4-6, Gd-T1 volumes were similar to DCE-MRI and both were greater than PET volumes. GBM 1-3 had lower overall survival than GBM 4-6: median 249 vs. 903 days. 18F-fluciclovine uptake and Gd uptake (on DCE-MRI) was seen beyond the margins of the standard Gd-T1 volume. Comparing these regions beyond the Gd-T1 margins, the PET and DCE-MRI had low DSC, suggesting distinct areas of fluciclovine and DCE-MRI uptake. Pre-clinical PET-CT demonstrated tumour-specific 18F-fluciclovine uptake which corresponded to biologically active tumour based on immunostaining for Ki-67, nestin and ASCT2. Conclusion Results from this joint pre-clinical and clinical pilot study suggest volumes of 18F-fluciclovine-PET activity beyond that depicted by MRI-DCE and Gd-T1 are associated with a poorer prognosis in patients undergoing chemoradiotherapy for GBM. The pre-clinical model confirmed 18F-fluciclovine uptake reflected biologically active tumour.
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- 2022
- Full Text
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44. An evaluation of the development of IT in a college of nursing and midwifery.
- Author
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William Lauder, S. Currie, Jim White, and Brian Scott
- Published
- 1998
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45. Pixxaro Alone and in Combination for Weed Control in Fallow
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R. S. Currie and Patrick W. Geier
- Subjects
Agronomy ,Computer Networks and Communications ,Hardware and Architecture ,Biology ,Weed control ,Software - Published
- 2021
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46. Testing Irrigated Cotton Production
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L. Haag, S. Duncan, Randall S. Currie, Jonathan Aguilar, and D. J. Tomsicek
- Subjects
Irrigation ,Agronomy ,Computer Networks and Communications ,Hardware and Architecture ,Production (economics) ,Environmental science ,Software - Published
- 2021
- Full Text
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47. Weed Control with Single and Split Herbicide Applications in Corn
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R. S. Currie and Patrick W. Geier
- Subjects
Agronomy ,Computer Networks and Communications ,Hardware and Architecture ,Biology ,Weed control ,Software - Published
- 2021
- Full Text
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48. Auxinic Herbicide Mixtures for Controlling Multiple Herbicide-Resistant Kochia in Fallow
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T. Lambert, Vipan Kumar, Phillip W. Stahlman, Rui Liu, and Randall S. Currie
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Agronomy ,Computer Networks and Communications ,Hardware and Architecture ,Herbicide resistant ,Biology ,Software - Published
- 2021
- Full Text
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49. UTILIZING REMOTE GEOLOGIC MAPPING TO ANALYZE STRATIGRAPHIC VARIATION IN THE TRIASSIC ISCHIGUALASTO FORMATION, SAN JUAN PROVINCE, ARGENTINA
- Author
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Brian S. Currie, Alexia Rojas, and Carina E. Colombi
- Subjects
Paleontology ,Variation (linguistics) ,Geologic map ,Geology - Published
- 2021
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50. Weed Control with Imazamox Rates and Timings in Herbicide-Tolerant Grain Sorghum
- Author
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R. S. Currie and Patrick W. Geier
- Subjects
biology ,Agronomy ,Computer Networks and Communications ,Hardware and Architecture ,Sorghum ,biology.organism_classification ,Weed control ,Software - Published
- 2021
- Full Text
- View/download PDF
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