3,978 results on '"SOIL biochemistry"'
Search Results
2. Acid rain reduces plant-photosynthesized carbon sequestration and soil microbial network complexity
- Author
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Liu, Ziqiang, Chen, Jiayi, Su, Zhijun, Liu, Zhenxiu, Li, Yazheng, Wang, Jing, Wu, Lizhu, Wei, Hui, and Zhang, Jiaen
- Published
- 2023
- Full Text
- View/download PDF
3. Visualising the trends of biochar influencing soil physicochemical properties using bibliometric analysis 2010–2022.
- Author
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Zhang, Tongkun, Cai, Heqing, Tang, Yuan, Gao, Weichang, Lee, Xinqing, Li, Huan, Li, Caibin, and Cheng, Jianzhong
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ENVIRONMENTAL soil science ,SOIL science ,SOIL biology ,BIBLIOMETRICS ,SOIL biochemistry ,SOIL erosion - Abstract
Based on bibliometric analysis, this paper summarized the research progress of the effects of biochar (BC) on soil physical and chemical properties and provided recommendations for future research. By using appropriate keywords, a total of 1,448 bibliographic records were retrieved from the Web of Science database, and these records were analysed on the basis of criteria, such as authors, keywords, citations, countries, institutions and journals. On the basis of these data, research advances were mapped to identify current scientific trends and the progress made, as well as knowledge gaps. The research began in the year 2010 and accelerated after the year 2015. Yong Sik Ok is the best-known and most productive author in the field. Moreover, China and America are important countries for BC research. Soil Biology and Biochemistry received the highest cocitation rate amongst active journals. Research hotspots can be separated into four distinct clusters, and future research can be summarised in these three directions: (1) the effects of BC mixed with organic and chemical fertilisers on crop growth and nitrogen use efficiency; (2) the response to a series of soil health problems, such as soil erosion and salinisation, by waste management to produce BC for bioremediation; and (3) the effects of BC on soil physicochemical properties from the perspective and mechanism of soil bacterial communities and other microorganisms. [ABSTRACT FROM AUTHOR]
- Published
- 2025
- Full Text
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4. Early allelopathic input and later nutrient addition mediated by litter decomposition of invasive Solidago canadensis affect native plant and facilitate its invasion.
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Sun, Jianfan, Fu, Yundi, Hu, Wenjie, Bo, Yanwen, Nawaz, Mohsin, Javed, Qaiser, Khattak, Wajid Ali, Akbar, Rasheed, Xiaoyan, Wang, Liu, Wei, and Du, Daolin
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BOTANICAL chemistry ,REED canary grass ,NITROGEN cycle ,FOREST litter ,SOIL biochemistry - Abstract
Litter decomposition is essential for nutrient and chemical cycling in terrestrial ecosystems. Previous research on in situ litter decomposition has often underestimated its impact on soil nutrient dynamics and allelopathy. To address this gap, we conducted a comprehensive study involving both field and greenhouse experiments to examine the decomposition and allelopathic effects of the invasive Solidago canadensis L. in comparison with the native Phalaris arundinacea L. In the field, a 6-month litter bag experiment using leaf litter from S. canadensis and P. arundinacea was conducted across three community types: invasive, native, and mixed. Seed germination tests were also performed to investigate the allelopathic effects of decomposing litter. In the greenhouse, a pot experiment with lettuce as a bioindicator was performed to examine the allelochemical inputs from litter decomposition over various time intervals (0, 30, 60, 120, and 180 days). Subsequently, a soil–plant feedback experiment was carried out to further evaluate the effects of decomposing litter on soil biochemistry and plant dynamics. The findings of this study revealed that S. canadensis litter decomposed more rapidly and exhibited greater nitrogen (N) remaining mass compared with P. arundinacea in both single and mixed communities. After 180 days, the values for litter mass remaining for S. canadensis and P. arundinacea were 36% and 43%, respectively, when grown separately and were 32% and 44%, respectively, in mixed communities. At the invasive site, the soil ammonia and nitrate for S. canadensis increased gradually, reaching 0.89 and 14.93 mg/kg by day 120, compared with the native site with P. arundinacea. The soil organic carbon for S. canadensis at the invasive site also increased from 10.6 mg/kg on day 0 to 15.82 mg/kg on day 120, showing a higher increase than that at the native site with P. arundinacea. During the initial decomposition stages, all litters released almost all of their allelochemicals. However, at the later stages, litters continued to input nutrients into the soil, but had no significant impact on the soil carbon (C) and N cycling. Notably, litter-mediated plant–soil feedback facilitated the invasion of S. canadensis. In conclusion, this study highlights the significance of litter decomposition as a driver of transforming soil biochemistry, influencing the success of invasive S. canadensis. [ABSTRACT FROM AUTHOR]
- Published
- 2025
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5. Impact of Dolomite Liming on Ammonia-Oxidizing Microbial Populations and Soil Biochemistry in Acidic Rice Paddy Soils.
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Shaaban, Muhammad, Wang, Xiaoling, Song, Peng, Hu, Ronggui, and Wu, Yupeng
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LIMING of soils , *ACID soils , *SOIL acidification , *AGRICULTURE , *SOIL biochemistry , *PHENOL oxidase - Abstract
Background and Aims: Over the last few decades, rampant nitrogen fertilization has exacerbated soil acidification in agricultural ecosystems. To counteract this, liming has become an essential technique for rehabilitating fertility in acid-degraded agricultural soils. Our research aimed to shed light on the response of ammonia oxidizers to liming in acidic soils within a controlled rice paddy experiment. We conducted a pot experiment with rice, featuring three different treatments: a control with only soil, a low dolomite dose (LD), and a high dolomite dose (HD). Various soil properties were investigated throughout the study. Under flooding, soil pH values rose across the treatments, from 5.4 in the control to 6.8 in HD. Ammonium and nitrate levels peaked in the HD treatment, reaching 30 and 22 mg kg−1, respectively. Similarly, dissolved organic carbon and microbial biomass carbon surged at mid-season aeration, hitting highs of 101 and 30 mg kg−1, respectively, in the HD treatment. Ammonia-oxidizing bacteria (AOB) and archaea (AOA) were responsive to dolomite-lime application, with distinct reactions; AOB abundance and potential nitrification rates were positively affected by higher lime doses, whereas AOA numbers decreased over time and with dolomite application. Additionally, soil enzymes such as urease, catalase, invertase, phenol oxidase, and phosphatase also increased progressively, mirroring the rise in soil pH. This study identified increased soil pH as the critical factor influencing various soil parameters, especially the balance between AOA and AOB populations. Both AOB and AOA were sensitive to liming; AOA decreased while liming stimulated AOB abundance. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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6. Metabolomic and volatilomic profiling for the assessment of soil carbon cycling and biological quality
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Brown, Rob, Jones, David, and Chadwick, David
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Carbon cycling ,Soil quality ,Soil organic matter ,Metabolomics ,Soil biochemistry ,Chemical ecology - Abstract
Soil is the universal substrate which underpins agricultural productivity, providing plants and soil organisms with water and nutrient resources, as well as a plethora of additional anthropogenic ecosystem services. However, the sustained intensity at which we are using soil resources and the increasing frequency and intensity of extreme weather events is leading to a serious decline in soil quality, often defined as 'the capacity of the soil to function', and associated ecosystem function and service delivery. Better understanding and monitoring soil quality is key to slowing and reversing this decline. Soil biology (and related biochemistry) has often been underutilised as an indicator of soil quality; however, it is one of the most reactive and sensitive indicators. This thesis explores novel methods of profiling the small organic molecules (i.e., metabolites) in the soil; produced by the biological community during the catabolism of substrates and anabolism of cellular metabolites. It examines methods of profiling both primary (i.e., compounds involved directly in the growth, development and reproduction of organisms) and secondary (i.e., compounds performing additional functions) metabolites in relation to soil quality and carbon (C) cycling. Specifically, I applied untargeted primary and secondary metabolomic methods to 'real world' field conditions and laboratory mesocosm experiments, assessing their applicability and aiming to further understand the complex biochemical interactions within the soil under a range of conditions, combining this data with a suite of physicochemical measurements to make conclusions about changes in soil quality and function. Here, I showed that, under field drought conditions, the primary metabolome shows similar trends to previous laboratory-based research, with significant increases in drought 'biomarker' compounds and storage lipids during drought, followed by a significant, rapid decrease in those compounds under post-drought conditions. Overall, soil functionality showed a high resilience to drought. Additionally, I showed that pure microplastic (MP) addition has little impact on the biological functioning of soil over a field season, even at unrealistically high loading rates. From the biological, physical and chemical indicators measured, few significant effects relative to no MP application were observed. However, it was concluded that while in the short-to-medium term MPs are recalcitrant and inert, pure plastic loading is unrealistic, and further research should be undertaken on the effect of plastic additives on soil health. Further, I mechanistically disentangled the effect of nutrient addition (C:N:P) on the soil microbial metabolite profile and C use efficiency. Demonstrating that; nitrogen (N) addition had the greatest impact on the ability of the soil microbial community to utilise excess C substrates, while phosphorus (P) addition led to significant increases in the synthesis of fatty acids. I concluded that inorganic nutrient enrichment of soils is likely to have substantial implications for labile and recalcitrant C cycling and microbial resource partitioning within the soil system. Additionally, I explored soil-derived secondary metabolites as an indicator of soil quality, by applying a headspace-solid phase microextraction (HS-SPME) method to profile the volatile organic compounds (VOCs) under a variety of induced 'soil qualities'. I identified compounds associated with the differences between treatments, showing that substrate availability and quality are key in the production and emission of VOCs. Also, I evaluated a novel HS-SPME-trap-enrichment method to improve compound recovery and sensitivity, comparing it with other HS-VOC extraction methods. I concluded that metabolomic and volatilomic methods provide another sensitive tool in the kit for the characterisation and elucidation of soil biochemistry and chemical ecology, to aid the understanding of the complex small molecule interactions taking place within soils. The ultimate aim being the integration of metabolomics with other 'omics platforms, with an emphasis on providing a greater functional understanding of key soil processes and the development of new soil health metrics.
- Published
- 2022
7. Pot experimental trial for assessing the role of different composts on decontamination and reclamation of a polluted soil from an illegal dump site in Southern Italy using Brassica juncea and Sorghum bicolor.
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Mazzon, Martina, Bozzi Cionci, Nicole, Buscaroli, Enrico, Alberoni, Daniele, Baffoni, Loredana, Di Gioia, Diana, Marzadori, Claudio, Barbanti, Lorenzo, Toscano, Attilio, and Braschi, Ilaria
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BRASSICA juncea ,SORGHUM ,COMPOSTING ,POLYCHLORINATED biphenyls ,POLYCYCLIC aromatic hydrocarbons ,PLANT biomass - Abstract
A pot experiment was carried out to evaluate the remediation potential of Brassica juncea and Sorghum bicolor in the decontamination of soil polluted with heavy metals such as copper, lead, tin, and zinc along with polychlorinated biphenyls, polycyclic aromatic hydrocarbons, and heavy hydrocarbons. Two composts obtained from different composting processes were tested as biostimulating agents. At the end of the trial, the effect of plant/compost combinations on soil microbial composition, contaminant removal, biochemical indicators, and plant biomass production was determined. The results highlighted that compost addition improved plant biomass despite slowing down plants' removal of organic and inorganic contaminants. In addition, compost partially enhanced the soil biochemical indicators and modified the relative abundance of the rhizosphere microorganisms. Sorghum showed better mitigation performance than Brassica due to its higher growth. The soil fertility level, the choice of plant species, and microbial richness were found fundamental to perform soil remediation. In contrast, compost was relevant for a higher crop biomass yield. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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8. RITES OF JANUS: The educated life and crimes of Dr. Hans Beutelspacher.
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Beyda, Oleg and Petrov, Igor
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WORLD War II ,RITES & ceremonies ,RUSSIAN history ,SOIL biochemistry ,CRIME ,NAZI Germany, 1933-1945 ,GERMAN history - Abstract
The history that follows will show that the limits of (in)humanity are malleable and readily shifted. Whirled in the chaos of life, ordinary people may suddenly be transformed into monsters, and later, may return calmly to their former nature. It remains unclear why these limits prove so diffuse. Dr. Hans Beutelspacher, whose life story took us ten years to reconstruct, traced this path in both directions, and thus came to embody yet another mystery of the human mind. The possessor of an educated and inventive intelligence, he toyed with monstrous behaviour during World War II, before returning just as effortlessly to his «human» and even benevolent state, later developing a prominent career in the field of soil biochemistry. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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9. Sugarcane/soybean intercropping with reduced nitrogen addition promotes photosynthesized carbon sequestration in the soil.
- Author
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Tantan Zhang, Hu Tang, Peng Peng, Shiqiang Ge, Yali Liu, Yuanjiao Feng, and Jianwu Wang
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CATCH crops ,CARBON sequestration ,INTERCROPPING ,CROPPING systems ,CARBON in soils ,SUGARCANE ,NITROGEN fertilizers - Abstract
Introduction: Sugarcane/soybean intercropping with reduced nitrogen (N) addition has improved soil fertility and sustainable agricultural development in China. However, the effects of intercropping pattern and N fertilizer addition on the allocation of photosynthesized carbon (C) in plant-soil system were far less understood. Methods: In this study, we performed an
13 CO2 pulse labeling experiment to trace C footprints in plant-soil system under different cropping patterns [sugarcane monoculture (MS), sugarcane/soybean intercropping (SB)] and N addition levels [reduced N addition (N1) and conventional N addition (N2)]. Results and discussion: Our results showed that compared to sugarcane monoculture, sugarcane/soybean intercropping with N reduced addition increased sugarcane biomass and root/shoot ratio, which in turn led to 23.48% increase in total root biomass. The higher root biomass facilitated the flow of shoot fixed13 C to the soil in the formof rhizodeposits. More than 40% of the retained13 C in the soil was incorporated into the labile C pool [microbial biomass C (MBC) and dissolved organic C (DOC)] on day 1 after labeling. On day 27 after labeling, sugarcane/soybean intercropping withN reduced addition showed the highest13 C content in the MBC as well as in the soil, 1.89 and 1.14 times higher than the sugarcane monoculture, respectively. Moreover, intercropping pattern increased the content of labile C and labile N (alkaline N, ammonium N and nitrate N) in the soil. The structural equation model indicated that the cropping pattern regulated13 C sequestration in the soil mainly by driving changes in labile C, labile N content and root biomass in the soil. Our findings demonstrate that sugarcane/soybean intercropping with reduced N addition increases photosynthesized C sequestration in the soil, enhances the C sink capacity of agroecosystems. [ABSTRACT FROM AUTHOR]- Published
- 2023
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10. Integral Assessment of the Soil Component of Wine Terroir.
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Averianov, A. A., Androsova, E. D., and Rusakov, A. V.
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TERROIR , *GRAPE growing , *SOIL profiles , *SOILS , *SOIL compaction , *SWEET cherry - Abstract
Selection of a land plot is one of the first and most important stages during realization of the vineyard project. The final decision at this stage is determined by many factors, including the cost of the land plot, its logistical parameters, tourist attractiveness, etc. The most important among them is the suitability of the plot for grape cultivation, determined by a combination of soil, climatic, and orographic conditions, which are combined in the concept of terroir in the production practice of viticulture and winemaking. An integral assessment of the soil component of the terroir of test plots located in contrasting physical-geographical conditions of France (communes of Le Bignon and Domme) and Russia (villages of Fruktovoe and Beregovoi) was performed. The optimal list of analyzed soil properties based on the parameters taken into account when choosing rootstock varieties—the design solution that most depends on soil conditions—was determined in the course of the work. Then, the procedure of compression of the information on the soil component of the terroir of test plots was performed, and locally oriented weight coefficients were calculated. According to the results of the average integral assessment in the 1-m-deep layer of soil profiles, the following ranked sequence of test plots from the best soil conditions to the worst ones was obtained: the village of Beregovoi (score 0.84), the commune of Le Bignon (score 0.70), the village of Fruktovoe (scores 0.66 and 0.65), and the commune of Domme (score 0.63), the values of which can be compared with other factors at the stage of making a decision on planting vineyards. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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11. Medium-term interactive effects of herbivores and plant life form on the biochemistry of shallow sandy soils in a protected semi-arid savanna.
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Malongweni, Siviwe Odwa and van Tol, Johan
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SAVANNAS ,SANDY soils ,HERBIVORES ,SOIL biochemistry ,BIOCHEMISTRY ,SOIL acidity ,NITROGEN in soils - Abstract
Savannas are characterized by the co-occurrence of two different plant life forms: grasses and trees. Herbivory plays a major role in the balance between grasses and trees in savanna ecosystems. The present study aimed to investigate the impact and interactions between long-term (i.e. 20 years) herbivory and/or its exclusion and plant life form on the soil biochemistry of a protected semi-arid savanna ecosystem in the Kruger National Park (KNP), South Africa. To study the effects of herbivory on soil properties, herbivore exclosures (fully fenced areas, partially fenced areas, and an unfenced area) were used in conjunction with plant life form (trees and grasses) were considered. Interaction effects of herbivory and plant life form on soil pH, electrical conductivity (EC), total nitrogen (TN), total carbon (TC), available phosphorus (available P), exchangeable cations (K
+ , Na+ , Mg2+ and Ca2+ ) cation exchange capacity (CEC), organic matter (OM) and total microbial activity were determined on savanna soils in the Nkuhlu exclosures, KNP. Exclosures where herbivores were present had significantly higher soil pH, The presence of herbivores caused an increase in soil pH, EC, exchangeable Na, CEC, and OM. The influence of the tree canopy was significantly more pronounced in elevating total C and N, exchangeable K+ , Mg2+ and Ca2+ , CEC and OM than observed in the open grassland zones across all exclosures. The two-way interaction between herbivory and plant life form resulted in significant decreases in TN, TC, exchangeable K, Na and Mg in open grassland areas outside of herbivore exclosures where large animals had direct access, as compared to areas within the exclosures which was protected from animal entry herbivory. This data can be used by national parks as an indicator to increase their knowledge of environmental issues relating to maintaining and preserving landscape features of savannas. [ABSTRACT FROM AUTHOR]- Published
- 2023
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12. Trends in Research on Soil Organic Nitrogen over the Past 20 Years.
- Author
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Chen, Shiyou, Jiang, Chunqian, Wang, Hui, Bai, Yanfeng, and Jiang, Chunwu
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SOIL biology ,NITROGEN in soils ,BIBLIOMETRICS ,FOREST conversion ,SOIL biochemistry ,TREE growth - Abstract
Nitrogen (N), an indispensable mineral nutrient element for plant growth and development, is a major limiting source of productivity in many terrestrial ecosystems. Soil organic nitrogen (SON) is a crucial form of nitrogen (N) in the N cycle within terrestrial ecosystems, acting as either a "source" or a "sink" for environmental N release. In order to illustrate the research trends, evolution process and hotspots of SON, a bibliometric analysis was used to analyze 906 documents based on the ISI (Institute of Scientific Information) Web of Science (WoS) database. The results indicated that (1) the number of published papers on SON research showed a wavy growth from 2000 to 2022 and the research has entered a mature development period; China has been increasing its number of publications and has long been in the lead; (2) the most productive institutions and authors in this subject area are in the USA and China, with the Chinese Academy of Sciences being the key institution performing such research; (3) in the sample, Soil Biology and Biochemistry, Science of the Total Environment, and Biogeochemistry are the leading international journals that have played a key role in the evolution of the field and have laid a solid foundation for future research; (4) the characteristics and maintenance of SON in farmland and SON migration in small watersheds under forest conversion have become research hotspots. Through the in-depth analysis of SON research, this paper provides a better understanding of the development trends of SON over the past 20 years, which can also provide reference for future research. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
13. Impact of nanomaterials accumulation on the organic carbon associated enzymatic activities in soil.
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Tripathi, Gyan Datta, Javed, Zoya, Gattupalli, Meghana, and Dashora, Kavya
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SOIL biochemistry , *SOIL enzymology , *SOIL biology , *SOIL protection , *NANOSTRUCTURED materials - Abstract
Nanoproducts are gaining more importance in scientific society and the industrial sphere thus emerging as a new contaminant of the terrestrial systems including soil biology and biochemistry. Organic carbons are crucial in the growth and development of microorganisms and plants. Soil rich in organic carbon is considered as fertile. Enzymes like β-glucosidase, xylanases, and proteases are responsible for the last stage of complex organic matter degradation and the release of free carbon in the soil. Many of these enzymes may be considered as an important aspect for the policies pertaining to soil protection in the future keeping nanoparticle mediated toxicity of soil as a vital parameter. Due to accumulation of nanomaterials in soil, these activities may affect the function of enzymes and nutrient availability, but the detailed investigations are under developing phase. In this mini review, the authors have tried to establish a relationship between the negative impacts of nanoparticles on soil enzymes as a future concern. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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14. Distribution of Soil Nutrients and Ancient Agriculture on Young Volcanic Soils of Ta'ū, American Samoa.
- Author
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Autufuga, Dolly, Quintus, Seth, Yoo, Kyungsoo, Day, Stephanie, Huebert, Jennifer, Deenik, Jonathan, and Lincoln, Noa Kekuewa
- Subjects
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VOLCANIC soils , *TRADITIONAL farming , *AGRICULTURE , *CROPPING systems , *SOIL biochemistry , *SOIL chemistry - Abstract
Soils and agriculture are inextricably linked, in the past as well as today. The Pacific islands, which often represent organized gradients of the essential soil-forming factors of substrate age and rainfall, represent excellent study systems to understand interactions between people and soils. The relationship between soil characteristics and indigenous agricultural practices are well documented for some locations, but there is a paucity of data for much of the region. Given the extent of ecological adaptation that has been documented, specifically for Hawai'i, new Pacific datasets are expected to provide important insights into indigenous agricultural practices. To contribute to this discussion, we analyzed patterns in soil chemistry and vegetation in the Manu'a islands of American Samoa. Soils were sampled along transects that crossed through precontact settlement zones in the upland of Fiti'uta on Ta'ū island, a location characterized by young (<100 ky) volcanic substrates and very high (>3800 mm y−1) annual rainfall. Soils were analyzed for several soil fertility properties that have been proposed as predictors of intensive rainfed tuber production in Hawai'i and Rapa Nui. Surveys of remnant economic plants were conducted to assess patterns of past land use. Soils demonstrated moderate values of soil fertility as measured by pH, base saturation, exchangeable calcium, and total and exchangeable phosphorus, despite the high rainfall. Previously identified soil fertility indicators had some application to the distribution of traditional agriculture, but they also differed in important ways. In particular, low exchangeable calcium in the soils may have limited the agricultural form, especially the cultivation of tubers. Significant shifts in both soil parameters and remnant economic crops were documented, and alignment suggests cropping system adaptation to soil biochemistry. Archaeological samples combined with surveys of relict vegetation suggest that agroforestry and arboriculture were key components of past agricultural practices. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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- View/download PDF
15. Corrigendum to "Input of high-quality litter reduces soil carbon losses due to priming in a subtropical pine forest" [Soil Biology and Biochemistry 194 (2024) 109444].
- Author
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Li, Shiting, Lyu, Maokui, Deng, Cui, Deng, Wei, Wang, Xiaohong, Cao, Anne, Jiang, Yongmeng, Liu, Jueling, Lu, Yuming, and Xie, Jinsheng
- Subjects
- *
SOIL biology , *SOIL biochemistry , *SOIL erosion , *SCHOLARLY periodical corrections , *CARBON in soils - Published
- 2025
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- View/download PDF
16. How to produce an effective manuscript: Further perspectives from the Editors-in-Chief of Soil Biology and Biochemistry.
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Ritz, Karl, Schimel, Joshua, and Whalen, Joann
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SOIL biochemistry , *SOIL biology , *MANUSCRIPTS - Published
- 2025
- Full Text
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17. Effects of waterlogging and elevated salinity on the allocation of photosynthetic carbon in estuarine tidal marsh: a mesocosm experiment.
- Author
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Li, Ya-Lei, Ge, Zhen-Ming, Xie, Li-Na, Li, Shi-Hua, Tan, Li-Shan, and Hancke, Kasper
- Subjects
- *
WATERLOGGING (Soils) , *SALT marshes , *COASTAL wetlands , *SALINITY , *ABSOLUTE sea level change , *PHRAGMITES australis , *CONDITIONED response , *CARBON fixation - Abstract
Background and aim: Coastal marshes and wetlands hosting blue carbon ecosystems have shown vulnerability to sea-level rise (SLR) and its consequent effects. In this study, we explored the effects of waterlogging and elevated salinity on the accumulation and allocation of photosynthetic carbon (C) in a widely distributed species in marsh lands. Methods: The plant–soil mesocosms of Phragmites australis were grown under waterlogging and elevated salinity conditions to investigate the responses of photosynthetic C allocation in different C pools (plant organs and soils) based on 13CO2 pulse-labeling technology. Results: Both waterlogging and elevated salinity treatments decreased photosynthetic C fixation. The hydrological treatments also reduced 13C transport to the plant organs of P. australis while significantly increased 13C allocation percentage in roots. Waterlogging and low salinity had no significant effects on 13C allocation to rhizosphere soils, while high salinity (15 and 30 ppt) significantly reduced 13C allocation to soils, indicating a decreased root C export in saline environments. Waterlogging enhanced the effects of salinity on the 13C allocation pattern, particularly during the late growing season. The responses of flooding and elevated salinity on C allocation in plant organs and rhizosphere soils can be related to changes in nutrient, ionic concentrations and microbial biomass. Conclusion: The adaptation strategy of P. australis led to increased C allocation in belowground organs under changed hydrology. Expected global SLR projection might decrease total C stocks in P. australis and alter the C allocation pattern in marsh plant-soil systems, due to amplified effects of flooding and elevated salinities. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
18. Perspectives to Increase the Precision of Soil Fertility Management on Farms
- Author
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Whalen, Joann K., Tietjen, Jill S., Series Editor, and Hamrita, Takoi Khemais, editor
- Published
- 2021
- Full Text
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19. The effects of polyhalite (POLY4) on soil structure, stability and nutrient behaviour
- Author
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Raffan, Annette, Hallett, Paul D., Lewis, Timothy E., and Paton, Graeme I.
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580 ,Minerals ,Potassium fertilizers ,Soil structure ,Soil biochemistry - Abstract
Mineral fertilisers in agriculture are key to meeting the food requirements of the predicted 9.8 billion population by 2050. But raw resources of these are finite and their use is beset with problems such cost, access and environmental issues. Furthermore, increases in soil degradation makes it more difficult to meet food demands. This work considers polyhalite, 'POLY4' (K2Ca2Mg(SO4)4.2(H2O)) as a new UK potassium fertiliser resource with the proposal that the base cations it contains, could have additional beneficial effects on soil physical structure. A series of experiments were undertaken to study the effects of POLY4 on soil structural and stability properties and on nutrient behaviour. Initially, small-scale laboratory experiments were used to determine strength and stiffness changes in a wide range of soils after POLY4 addition. Strong responses were found in three of the soil types, with one demonstrating a 156% increase in soil tensile strength. Two soils were selected - Insch series, a sandy loam, and Pow Series, a silt loam, to undergo additional testing after exposure to simulated weathering stresses. Whilst most soil physical properties demonstrated limited evidence of changes from POLY4 or gypsum addition, there were differences in pH and shifts in the availability of the cations between the two treatments. When barley plants were grown, the drying and nutrient uptake from roots had a greater impact than K fertiliser source. Insch soil released soil K+ with application of potash fertiliser. Overall POLY4 did not confer any extra advantage on soil or plant properties over MOP or gypsum use as alternative K, Ca and S sources. POLY4, therefore could provide a suitable alternative K fertiliser. It has the potential to contribute to improving food security, whilst having a similar impact on soil properties to that of current mineral fertiliser options.
- Published
- 2018
20. Liquid Bioformulation Regulates Soil Microbial and Enzymatic Activities, and Nutrient Dynamics in Drip-Irrigated Aerobic Rice.
- Author
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Alemayehu, Yackob, Salimath, S. B., Thippeshappa, G. N., Ganapathi, G., Nandish, M. S., and Mallikarjuna, H. B.
- Subjects
- *
ACID phosphatase , *RICE , *SOIL biochemistry , *ALKALINE phosphatase , *CROP growth , *SOILS , *RHIZOSPHERE - Abstract
The use of liquid formulations―prepared from naturally available farm wastes―has increasingly gained popularity in recent years; however, it remains unclear how these amendments influence the rhizosphere soil biochemistry, particularly in aerobic rice. In this study, we reformulated the traditional liquid manure (Jeevamrutha) with microbial consortia as liquid bioformulation (LBF), and evaluated its potential effect (when applied with or without NPK-fertilizers) on soil biochemical properties and nutrient availability at different stages of crop growth. Six treatments were tested: (i) absolute control, (ii) conventional practice (CP), LBF applied twice at 2000 L ha–1 with (iii) 100% recommended dose of fertilizer (RDF) through a multi-split fertigation (LBF+NPK100), (iv) 75% RDF (LBF+NPK75), (v) 50% RDF (LBF+NPK50), and (vi) LBF alone. The results showed that soil microbial biomass carbon, total bacterial and fungal load, dehydrogenase, urease, and acid phosphatase activities were significantly (p <.05) higher in the LBF co-applied plots, particularly at the panicle initiation and maturity stages of rice. However, actinomycetes and alkaline phosphatase showed an irregular trend with the growth stages. The rhizosphere soil microbial index (RSMI) values were significantly higher under LBF co-applied treatments over the CP, signifying the improvement of soil quality. Grain yield with LBF+NPK75 increased by 30.3−37.8% and 19.3−32.4% for the summer and rainy seasons, respectively, compared with the CP. Combining LBF with NPK-fertigation had more long-lasting effect on soil N and P availability. Therefore, our findings suggest that substituting about half of RDF with LBF could bring promising agronomic and soil ecological benefits to the rice production under aerobic conditions. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
21. Evaluation of integrated responses of tillage and herbicides on weeds, soil biochemistry and productivity of wheat (Triticum aestivum L.) in the Eastern Sub-Himalayan plain of India.
- Author
-
Roy, Suchitra, Paul, Tarun, Patra, Partha Sarathi, Nandi, Kousik, and Mondal, Prithusayak
- Subjects
SOIL biochemistry ,SOIL productivity ,WHEAT ,NO-tillage ,TILLAGE ,WEEDS ,HERBICIDES - Abstract
A field experiment was conducted during the winter seasons of 2017–18 and 2018–19 at Uttar Banga Krishi Viswavidyalaya, Cooch Behar, West Bengal, India to study the impacts of tillage and herbicides on weeds, biochemical properties of soil, and productivity of wheat. Tillage systems had similar weed diversity, density and weed control index (WCI), whereas there were significant effects due to weed control treatments. Two hand weeding had superior weed control followed by Glyphosate 41% SL @ 2.5 L ha
−1 + (Sulfosulfuron 75% + Metsulfuron methyl 5% WG) @ 40 g ha−1 and (Sulfosulfuron 75% + Metsulfuron methyl 5% WG) @ 40 g ha−1 , as this treatment resulted in flat weed diversity, density, highest WCI, upsurge in grain yield and furthermore enriched biochemical properties of soil. Conventional tillage (CT) system recorded lower weed density than reduced tillage (RT) and zero tillage systems. Convincingly, low weed density, dry matter and highest WCI were recorded in two hand weeding at 20 and 40 days after sowing followed by herbicidal treatments at 40 and 60 DAS. Higher grain yield obtained with CT (3.48 t ha−1 and 3.88 t ha−1 ) was statistically at par with RT (3.12 t ha−1 and 3.59 t ha−1 ). Among the weed control treatments, hand weeding at 20 and 40 DAS generated more grain yield (3.61 t ha−1 ) during 2017–18 and Glyphosate 41% SL 2.5 l ha−1 + (Sulfosulfuron75% + Metsulfuron methyl 5% WG) @ 40 g ha−1 generated higher grain yield (3.90 t ha−1 ) during 2018–19. Soil organic carbon, soil available N, P2 O5 , and exchangeable K2 O were found non-significant due to tillage systems. Expressively higher soil organic carbon, soil available N, P2 O5 , and exchangeable K2 O were recorded with (Sulfosulfuron 75% + Metsulfuron methyl 5% WG) @ 60 g ha−1 and (Sulfosulfuron 75% + Metsulfuron methyl 5% WG) @ 40 g ha−1 . In CT, higher bacterial and actinomycetes colonies were found which was at par with RT. Herbicidal treatments recorded a higher number of bacterial and actinomycetes colonies and a lower number of fungal colonies. [ABSTRACT FROM AUTHOR]- Published
- 2022
- Full Text
- View/download PDF
22. Shrubs increase phosphorus transformation from inorganic to organic form via lowering soil pH in grazed alpine meadows.
- Author
-
Chen, Jie, Li, Yawen, Jia, Bin, Li, Fen-Can, Mou, Xiao Ming, Gang, Shu, and Li, Xiao Gang
- Subjects
- *
MOUNTAIN meadows , *SOIL acidity , *SOIL profiles , *SOIL sampling , *SOIL biochemistry , *PLATEAUS - Abstract
Shrubs are expanding in grassland ecosystems across the world, yet their influence on the spatial heterogeneity of soil phosphorus (P) transformation has seldom been investigated. We conducted grid sampling to a soil depth of 1.2 m in a grazed alpine meadow dominated by grass patches and four shrub species to analyze the spatial distributions of soil pH and total soil P and its acid-soluble (representing inorganic P) and acid-insoluble (organic) P fractions. Heterogeneities of soil pH and total, acid-soluble and acid-insoluble P were all visible to the depth of 1.2 m across the plot. The total P stock decreased in the upper 0.4 m of soil, but increased in the lower 0.8 m, under shrubs compared to grasses, resulting in only negligible differences in the total soil P stock in the entire 1.2 m profile between vegetation patch types. The acid-soluble P stock decreased under shrubs throughout the profile, responding to the lowering of soil pH by shrubs, while the acid-insoluble P stock increased in the lower 0.8 m, under shrubs compared with grasses. Soil acid-insoluble P under shrubs increased at the expense of acid-soluble P. These features led to significantly higher proportions of acid-insoluble P in the total P across the 1.2 m soil profile under shrubs (66–71 %) compared to grasses (55 %), associated with the lowered soil pH in shrubby patches. We conclude that shrubification alters the biochemistry of the soil P pool to a depth of at least 1.2 m. The lowered soil pH under shrubs drives the transformation of soil P from inorganic to organic forms in alpine meadows. The altered biochemistry of the soil P pool suggests a rapid release of available P, which supports primary productivity. We emphasize the importance of deep soil sampling in investigating the effects of shrubification on soil P cycling. [Display omitted] • Heterogeneities of soil pH and inorganic and organic P are visible to 1.2 m depth. • Soil organic P under shrubs increases at the expense of inorganic P. • Shrubs enhance soil P transformation from inorganic to organic form. • Enhancement of soil P transformation by shrubs is driven via lowering soil pH. • Total P stock in the 1.2 m soil is almost unaffected by shrubs. [ABSTRACT FROM AUTHOR]
- Published
- 2025
- Full Text
- View/download PDF
23. Advances in Organic Farming : Agronomic Soil Management Practices
- Author
-
Vijay Singh Meena, Sunita Kumari Meena, Amitava Rakshit, Johnson Stanley, Srinivasa Rao, Vijay Singh Meena, Sunita Kumari Meena, Amitava Rakshit, Johnson Stanley, and Srinivasa Rao
- Subjects
- Organic farming, Soil biochemistry
- Abstract
Advances in Organic Farming: Agronomic Soil Management Practices focuses on the integrated interactions between soil-plant-microbe-environment elements in a functioning ecosystem. It explains sustainable nutrient management under organic farming and agriculture, with chapters focusing on the role of nutrient management in sustaining global ecosystems, the remediation of polluted soils, conservation practices, degradation of pollutants, biofertilizers and biopesticides, critical biogeochemical cycles, potential responses for current and impending environmental change, and other critical factors. Organic farming is both challenging and exciting, as its practice of'feeding the soil, not the plant provides opportunity to better understand why some growing methods are preferred over others. In the simplest terms, organic growing is based on maintaining a living soil with a diverse population of micro and macro soil organisms. Organic matter (OM) is maintained in the soil through the addition of compost, animal manure, green manures and the avoidance of excess mechanization. - Presents a comprehensive overview of recent advances and new developments in the field OF research within a relevant theoretical framework - Highlights the scope of the inexpensive and improved management practices - Focuses on the role of nutrient management in sustaining the ecosystems
- Published
- 2021
24. Low-Rank Coal Applications in Agriculture : Humic Analyses, Products, and Performance
- Author
-
L. Edwin Liem and L. Edwin Liem
- Subjects
- Soil biochemistry, Coal, Soils--Humic acid content
- Abstract
Low-Rank Coal Applications in Agriculture explores the commercialization and marketing potential of low-rank coal, which is rich in organic matter and humic substances. The author--a noted expert on the topic--clearly shows from a practical perspective, that rather than using it as an energy source, this material can be applied for the agricultural sector. The author investigates low-rank coal;s potential as used in dry and liquid humic products. This book discusses both raw materials and commercial products, and provides data on improved soil quality, crop yields, and livestock productivity. This groundbreaking book: details how this material can benefit agriculture; thus positioning coal in the more'green sector'type of industry presents original data collected from laboratories and agricultural fields, and summarizes literature on the science and regulation of low-rank coal and humic substances Written for field practitioners, end users, marketers, operators, regulators, researchers, and academics, Low-Rank Coal Applications in Agriculture is the first book on the market to explore the real-life use of low-rank coal for the agricultural sector.
- Published
- 2021
25. Asian knotweed's impacts on soil chemistry and enzyme activities are higher in soils with low-nutrient status.
- Author
-
Dommanget, Fanny, Forey, Estelle, Chauvat, Matthieu, Erktan, Amandine, Noûs, Camille, Daniès, Léa, Chesseron, Coralie, and Fanin, Nicolas
- Subjects
- *
CARBON in soils , *SOIL biochemistry , *JAPANESE knotweed , *SOIL chemistry , *INTRODUCED species - Abstract
Invasive alien plants such as Reynoutria spp. can drastically affect the composition of plant communities. Yet, whether and how these species also affect soil physicochemical properties and microbial functioning is still an unresolved question in the literature. Using a space-for-time substitution approach comparing invaded to uninvaded adjacent plots, we estimated the impacts of Reynoutria on soil biochemistry across nine contrasted sites in France by measuring soil carbon content, nutrient availability and enzyme activities. Soil under Reynoutria displayed higher carbon, nitrogen and phosphorus contents but no differences were detected regarding enzyme activities between invaded and uninvaded sites. Moreover, the magnitude of Reynoutria 's effects differed depending on local conditions, with greater effects when total carbon and phosphorus-related enzymes were relatively low. These data highlight that changes in soil nutrient availability might be primarily due to direct effects of Reynoutria on soil properties and microbial functioning. Higher impacts were observed in soils with low-nutrient status, suggesting a 'niche construction ability' of Reynoutria. Our results underscore the necessity of considering the context-dependency of Reynoutria on soil biochemistry and highlight that the impact of alien species belowground functioning depends on initial soil conditions. [Display omitted] • We compared soil conditions in Reynoutria -invaded plots to riparian plots. • Reynoutria spp. positively affected carbon, nitrogen and phosphorus contents. • Reynoutria spp. did not affect enzyme activities. • The magnitude of Reynoutria 's effects differed depending on local conditions. • Higher impacts in poor soil conditions suggested a 'niche construction ability'. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
26. Bioavailability of Organic Chemicals in Soil and Sediment
- Author
-
Jose Julio Ortega-Calvo, John Robert Parsons, Jose Julio Ortega-Calvo, and John Robert Parsons
- Subjects
- Environmental toxicology, Pollution, Green chemistry, Environmental chemistry, Soil conservation, Soil science, Soil biochemistry
- Abstract
This book discusses bioavailability concepts and methods, summarizing the current knowledge on bioavailability science, as well as possible pathways for integrating bioavailability into risk assessment and the regulation of organic chemicals. Divided into 5 parts, it begins with an overview of chemical distribution in soil and sediment, as well as the bioavailability and bioaccumulation of chemicals in plants, soil, invertebrates and vertebrates (including humans). It then focuses on the impact of sorption processes and reviews bioavailability measurement methods. The closing chapters discuss the impact of bioavailability studies on chemical risk assessment, and highlights further research needs. Written by a multi-disciplinary team of authors, it is an essential resource for scientists in academia and industry, students, as well as for authorities.
- Published
- 2020
27. Soil Microbiology and Biochemistry
- Author
-
Ghulam Hassan Dar and Ghulam Hassan Dar
- Subjects
- Soil biochemistry, Soil microbiology
- Abstract
The book soil microbiology and biochemistry written in a comprehensive lucid manner, deals the issues concerned to the soil fertility, soil health, plant growth and soil biotechnology in relation to microbial activities. Special attention has been paid to the ecology, biochemistry and functioning of soil micro-organisms and their interactions. Thus, in a broad sense, the book shall prove useful tool to the students and teachers of microbiology and may also serve as an invaluable resource for students and teachers in soil science, soil ecology, biogeochemistry, environmental sciences, botany biochemistry, sustainable agriculture and resource management, both at under graduate and post graduate levels. This book has sixteen s with glossary of the terms often used in soil microbiology. The comprehensive introduction to soil microbiology and the rapid advances made in both fundamental knowledge and potential applications of soil microbiology e.g. history, ecology, habitats, diversification and functions of soil organisms, soil health and applied environmental topics is given in 1 to 3. The overview of the methods employed to study soil micro organisms is presented in 4. Microbial-mediated transformations of major nutrients (N, P, Fe, S, K, etc.) and other metals in soil are lucidly described in 5 to 9. The plant microbe interactions in soil, rhizosphere and phyllosphere is covered in 10 to 12 and these s provide comprehensive knowledge about mycorrhiza, plant growth promoting rhizosphere microorganisms, deleterious rhizosphere microorganisms, root pathogens besides enlightening the various types of soil microbial products of plant and Pesticide-microbe interactions also covers the effect on non-target microorganisms, pesticide persistence, accumulation and bio-magnification, co-metabolism, bioremediation, etc. A separate is devoted to the production and applications of biofertilizers and biopesticides. Organic waste recycling covers composting, vermin-compost, aquacultural reuse, land application, mushrooms and bio-energy production. The book keeps the learners abreast with the current trends and concepts in soil microbiology for easy comprehension. It also gives balanced coverage of fundamental and applied topics. Moreover, it introduces students to newly emerging field of soil biotechnology. The extensive glossary and index has been given at the end for easy study reference in understanding.
- Published
- 2020
28. Fire, Herbivores, and Vegetation Type Shape Soil Biochemistry in Sodic Patches of a Semi-Arid Savanna Ecosystem.
- Author
-
Malongweni, Siviwe Odwa and van Tol, Johan
- Subjects
SODIC soils ,SOIL biochemistry ,SOIL classification ,SAVANNAS ,HERBIVORES ,WILDFIRES ,FOREST fires - Abstract
In the Kruger National Park (KNP), the lower slopes of catenas have open patches referred to as sodic patches. Fire and herbivores are dominant mediators of vegetation in sodic patches. The effect of fire and herbivores on soil properties of sodic patches remains largely understudied. Moreover, the co-existence of trees and grasses and how they influence savanna soils is an important but poorly understood phenomenon in ecology. Therefore, the present study aimed to determine the influence of 20 years of fire, herbivores, vegetation type, and their interaction on soil biochemistry of sodic patches on the Nkuhlu exclosures in the Kruger National Park, South Africa. We found a higher main effect of fire on available phosphorus, cation exchange capacity, and soil organic matter. The presence of herbivores caused an increase in soil exchangeable cations (K
+ , Ca2+ , Na+ , and Mg2+ ), organic matter, cation exchange capacity, and microbial activity. Tree canopies had a higher effect on total nitrogen, exchangeable Ca and Mg, soil organic matter, and cation exchange capacity than open grassland zones. Our results indicate that changes in vegetation structure due to fire and herbivores and their secondary impact on soil properties should be taken into consideration in managing savannas. Moreover, fire and herbivores play an important role in the maintenance of vegetation type (trees and grasses) in sodic patches. [ABSTRACT FROM AUTHOR]- Published
- 2022
- Full Text
- View/download PDF
29. Distinct Behavior of Biochar Modulating Biogeochemistry of Salt-Affected and Acidic Soil: a Review
- Author
-
Singh, Shivvendra, Luthra, Nidhi, Mandal, Sandip, Kushwaha, Daniel Prakash, Pathak, Shakti Om, Datta, Debarati, Sharma, Rashmi, and Pramanick, Biswajit
- Published
- 2023
- Full Text
- View/download PDF
30. Black soldier fly larvae vermicompost alters soil biochemistry and bacterial community composition.
- Author
-
Xiang, FangMing, Sheng, JianLin, Li, Gang, Ma, JingJin, Wang, XianZhe, Jiang, ChengLiang, and Zhang, ZhiJian
- Subjects
- *
HERMETIA illucens , *BLACK cotton soil , *SOIL biochemistry , *BACTERIAL communities , *FOOD waste recycling , *DISSOLVED organic matter , *BIOCONVERSION - Abstract
Black soldier fly larvae (Hermetia illucens L. BSFL) bioconversion is a promising biotechnology for food waste recycling, yet little is known about how BSFL vermicompost affects soil health in terms of element availability and related microbial response. In this work, a field soil experiment for luffa (Luffa cylindrica (L.) Roem.) growth was conducted to examine the impacts of BSFL vermicompost (BV, 9750 kg ha−1, equal to total N input rate of chemically treated soil (CK)) on soil biochemistry and bacterial communities. Relative to CK, application of BV significantly increased total soil carbon by 149% and enhanced catalase and urease activity by 59.2% and 16.2%, respectively. BV increased the degree of aromaticity and humification in dissolved organic matter (DOM) in soil by 28.6% and 27.3%, respectively, compared to CK treatment. Among bacterial communities in soil, Bacteroidetes, Firmicutes, Proteobacteria, and Actinobacteria were the phyla that showed the most substantial alteration in response to BV. Redundancy analysis further revealed that the bacterial community structure was affected by DOM and total phosphorus. Functional analyses indicated that BV enhanced xylanolysis (55.4%) and nitrogen fixation (46.3%), but inhibited nitrification (59.8%). BSFL vermicompost input might effectively prevent the harm of soil borne pathogens (e.g., wilt). Moreover, these function groups strongly correlated with Clostridiales, Actinomycetales, and Nitrospirales. Our study reveals that BSFL vermicompost promoted soil nutrient availability, microbial community succession, and biochemical function optimization, which is conducive to the popularization and application of BSFL vermicompost in the field of soil health. Key points: • Vermicompost enhanced catalase and urease levels while increased DOM aromaticity. • Vermicompost enriched Bacteroidetes and Firmicutes and improved soil health. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
31. Impacts and Drivers of Smooth Brome (Bromus inermis Leyss.) Invasion in Native Ecosystems.
- Author
-
Palit, Rakhi and DeKeyser, Edward S.
- Subjects
BROMEGRASSES ,HERBICIDE application ,SOIL biochemistry ,ECOSYSTEMS ,POPULATION dynamics ,BERMUDA grass ,CHEATGRASS brome - Abstract
Smooth brome (Bromus inermis Leyss.) is an invasive cool-season grass that has spread throughout the Great Plains of North America. The species is considered one of the most widespread exotic grasses that has successfully invaded both cool-season and warm-season native prairies. In the prairies where it has invaded, there has often been a total elimination of native species and an overall homogenization of ecosystems. Smooth brome has greater competitive abilities compared to many native grasses and can foster their total elimination in many instances. The greater competitiveness can be partially attributed to its ability to alter the soil and hydrological properties of a site. It is a deep-rooted rhizomatous grass species that thrives in nitrogen-enriched soil, and since its leaf tissue decomposes faster than native species, it in turn increases the soil nitrogen level, causing positive plant-soil feedback. Moreover, smooth brome is able to transport the required nutrients from older plants to the newer progenies invading new nutrient-depleted areas, making it a potent invader. However, the impact of smooth brome is not limited to soil biochemistry alone; it also affects other ecosystem components such as the movement and behavior of many native arthropods, thereby altering the overall population dynamics of such species. Thus, smooth brome invasion poses a serious threat to the remnant prairies of the Great Plains, and efficient management strategies are urgently needed to control its invasion. Control measures such as mowing, grazing, burning, and herbicide application have been effectively used to manage this species. However, due to the widespread distribution of smooth brome across North America and its adaptability to a wide range of environmental conditions, it is challenging to translate the management strategies from one area to another. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
32. Plague risk in the western United States over seven decades of environmental change.
- Author
-
Carlson, Colin J., Bevins, Sarah N., and Schmid, Boris V.
- Subjects
- *
PLAGUE , *YERSINIA pestis , *SOIL biochemistry , *TROPHIC cascades , *GEOGRAPHY , *CLIMATE change , *SPECIES diversity - Abstract
After several pandemics over the last two millennia, the wildlife reservoirs of plague (Yersinia pestis) now persist around the world, including in the western United States. Routine surveillance in this region has generated comprehensive records of human cases and animal seroprevalence, creating a unique opportunity to test how plague reservoirs are responding to environmental change. Here, we test whether animal and human data suggest that plague reservoirs and spillover risk have shifted since 1950. To do so, we develop a new method for detecting the impact of climate change on infectious disease distributions, capable of disentangling long‐term trends (signal) and interannual variation in both weather and sampling (noise). We find that plague foci are associated with high‐elevation rodent communities, and soil biochemistry may play a key role in the geography of long‐term persistence. In addition, we find that human cases are concentrated only in a small subset of endemic areas, and that spillover events are driven by higher rodent species richness (the amplification hypothesis) and climatic anomalies (the trophic cascade hypothesis). Using our detection model, we find that due to the changing climate, rodent communities at high elevations have become more conducive to the establishment of plague reservoirs—with suitability increasing up to 40% in some places—and that spillover risk to humans at mid‐elevations has increased as well, although more gradually. These results highlight opportunities for deeper investigation of plague ecology, the value of integrative surveillance for infectious disease geography, and the need for further research into ongoing climate change impacts. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
33. Effect of poplar and eucalyptus based agroforestry system on soil biochemistry.
- Author
-
Sharma, A., Sah, V. K., Yadav, V., and Kaushik, P.
- Subjects
- *
AGROFORESTRY , *SOIL biochemistry , *EUCALYPTUS , *BIOCHEMICAL genetics , *ELECTRIC conductivity - Abstract
The field experiment was conducted during the winter season of 2016-17 at the experimental site of Agroforestry Research Centre, G. B. Pant University of Agriculture and Technology, Pantnagar, Uttarakhand. Poplar and eucalyptus were intercropped with different wheat varieties (UP-2526, UP-2565, UP-2628, and DPW-621-50). After harvesting the wheat crop, the soil sampling was performed to determine the soil parameters like electrical conductivity (EC), organic carbon and the minerals content. Nitrogen, phosphorus and potassium content and other biochemical constituents were higher in the agroforestry system as compared to the open farming system. A high soil pH (7.53) was found in an open farming system and lower pH in an agroforestry system. Soil EC in the agroforestry system was slightly higher than the open farming system. Organic carbon was maximum (1.33%) under the poplar agroforestry system compared to the eucalyptus based agroforestry system. Overall, this study determines the effect of poplar and eucalyptus based agroforestry systems on soil biochemistry. [ABSTRACT FROM AUTHOR]
- Published
- 2022
34. Durum wheat salt stress tolerance is modulated by the interaction between plant genotypes, soil microbial biomass, and enzyme activity.
- Author
-
Boudabbous, Khaoula, Bouhaouel, Imen, Benaissa, Nadhira, Jerbi, Maroua, Trifa, Youssef, Sahli, Ali, Karmous, Chahine, and Amara, Hajer S.
- Subjects
DURUM wheat ,BIOMASS ,GENOTYPES ,SOILS ,SOIL biochemistry ,SOIL salinity - Abstract
Understanding the relationship between durum wheat genotypes and soil biochemistry under salt stress plays a key role in breeding for yield superior genotypes. Thus, microbial biomass carbon (MBC) and nitrogen (MBN), the activity of three selected enzymes including dehydrogenase (D-ase), alkaline phosphatase (Alk-ase), and protease (P-ase), and available phosphorus (available P) and nitrogen (available N) were assessed. Two landraces and two improved varieties were tested under two salinity levels of water irrigation (0.3 and 12 dS m
-1 ). Soil sampling was carried out at five durum wheat growth stages. The soil biota-genotype interaction seems to affect the biological (MBC, MBN, and enzymatic activities) and chemical (available P and N) traits. The microbial activity of rhizospheric soil was higher at the tillering and flowering stages. Under saline conditions, 'Maali' (improved variety) and 'Agili Glabre' (landrace) showed the best belowground inputs (e.g., MBC, MBN, enzymatic activities, available P and N) and grain yield (GY) performance. Under the same conditions, four soil biochemical indicators of GY of tolerant genotypes (i.e., 'Maali' and 'Agili Glabre') were determined as available N, P-ase, available P, Alkase, and D-ase. Stepwise analysis revealed that predictive variables depended on growth stages. Overall, MBC, available N, Alk-ase, and P-ase were the variables that mainly contributed to predicting GY in saline environments. In conclusion, the results suggested a specific interaction between plant genotype roots and soil microbes to overcome salt stress. Thus, soil biological components should acquire more importance in plant salinity tolerance studies. [ABSTRACT FROM AUTHOR]- Published
- 2022
- Full Text
- View/download PDF
35. Researchers' Work from Chinese Academy of Sciences Focuses on Bacterial Infections and Mycoses (Manure Application Enriches Phage-associated Antimicrobial Resistance and Reconstructs Ecological Network of Phage-bacteria In Paddy Soil).
- Subjects
SOIL biology ,BACTERIAL diseases ,ENVIRONMENTAL health ,SOIL biochemistry ,URBAN health - Abstract
Researchers from the Chinese Academy of Sciences conducted a study on the impact of manure application on bacterial infections and antimicrobial resistance in paddy soil. The research found that manure fertilization led to changes in the microbial community composition, increased abundance of bacterial antibiotic resistance genes, and restructuring of the phage-bacteria ecological network. This study highlights the potential role of environmental factors in the dissemination of antibiotic resistance genes in agricultural soils. [Extracted from the article]
- Published
- 2024
36. Pollution Characteristics, Spatial Patterns, and Sources of Toxic Elements in Soils from a Typical Industrial City of Eastern China.
- Author
-
Fang Xia, Youwei Zhu, Bifeng Hu, Xueyao Chen, Hongyi Li, Kejian Shi, and Liuchang Xu
- Subjects
SOIL pollution ,ECOLOGICAL risk assessment ,SOIL biochemistry ,EMISSIONS (Air pollution) ,BIOCHAR - Abstract
Soil pollution due to toxic elements (TEs) has been a core environmental concern globally, particularly in areas with developed industries. In this study, we sampled 300 surface (0-0.2 m) soil samples from Yuyao City in eastern China. Initially, the geo-accumulation index, potential ecological risk index, single pollution index, and Nemerow composite pollution index were used to evaluate the soil contamination status in Yuyao City. Ordinary kriging was then deployed to map the distribution of the soil TEs. Subsequently, indicator kriging was utilized to identify regions with high risk of TE pollution. Finally, the positive matrix factorization model was used to apportion the sources of the different TEs. Our results indicated that the mean content of different TEs kept the order: Zn > Cr > Pb > Cu > Ni > As > Hg ≈ Cd. Soil pollution was mainly caused by Cd and Hg in the soil of Yuyao City, while the content of other TEs was maintained at a safe level. Regions with high TE content and high pollution risk of TEs are mainly located in the central part of Yuyao City. Four sources of soil TEs were apportioned in Yuyao City. The Pb, Hg, and Zn contents in soil were mainly derived from traffic activities, coal combustion, and smelting. Meanwhile, Cu was mainly sourced from industrial emissions and atmospheric deposition, Cr and Ni mainly originated from soil parental materials, and Cd and As were produced by industrial and agricultural activities. Our study provides important implications for improving the soil environment and contributes to the development of efficient strategies for TE pollution control and remediation. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
37. Potential Effects of Biochar Application for Improving Wheat (Triticum aestivum L.) Growth and Soil Biochemical Properties under Drought Stress Conditions.
- Author
-
Zaheer, Muhammad Saqlain, Ali, Hafiz Haider, Soufan, Walid, Iqbal, Rashid, Habib-ur-Rahman, Muhammad, Iqbal, Javaid, Israr, Muhammad, and El Sabagh, Ayman
- Subjects
BIOCHAR ,WHEAT yields ,SOIL biochemistry ,DROUGHTS & the environment ,HARVESTING - Abstract
Different soil amendments are applied to improve soil properties and to achieve higher crop yield under drought conditions. The objective of the study was to investigate the role of biochar for the improvement of wheat (Triticum aestivum L.) growth and soil biochemical properties under drought conditions. A pot experiment with a completely randomized design was arranged with four replications in a wire house. Drought was imposed on two critical growth stages (tillering and grain filling) and biochar was applied to the soil 10 days before sowing at two different rates (28 g kg
-1 38 g kg-1 Soil samples were collected to determine the soil properties including soil respiration and enzymatic parameters after crop harvesting. Results showed that water stress negatively affects all biochemical properties of the soil, while biochar amendments positively improved these properties. Application of biochar at 38 g kg-1 provided significantly higher mineral nutrients, Bray P (18.72%), exchangeable-K (7.44%), soil carbon (11.86%), nitrogen mineralization (16.35%), and soil respiration (6.37%) as a result of increased microbial activities in comparison with the 28 g kg-1 . [ABSTRACT FROM AUTHOR]- Published
- 2021
- Full Text
- View/download PDF
38. Impact of seasonality, moss cover, and forest types on soil microbial biomass and enzymatic activity: An environmental prospective from the Himalaya.
- Author
-
Siwach, Anshu, Zhuang, Qianlai, and Baishya, Ratul
- Subjects
- *
BIOGEOCHEMICAL cycles , *GROUND cover plants , *SOIL biochemistry , *TEMPERATE forests , *NUTRIENT cycles , *MOSSES , *OAK - Abstract
[Display omitted] • Seasons, forest types, and ground cover together alters soil microbial biomass C, N, and enzymes. • Quercus sp. and C. torulosa forests have better soil quality indicators than P. roxburghii forests. • Rainy season with optimum conditions for microbial activity promotes SMBC, SMBN, and enzymes. • Moss cover with higher nutrient and moisture retention attributes to higher microbial biomass. • Soil organic matter and moisture were important controlling factors for SMBC, SMBN, and enzymes. Soil microbial biomass (SMB) is a key storehouse of carbon and nitrogen, driving biogeochemical cycles. Understanding soil microbial biomass carbon (SMBC), soil microbial biomass nitrogen (SMBN), and soil enzymes is crucial for global nutrient cycling. Soil biochemistry is linked to seasonal and vegetation-related soil changes, but little is known about how season, moss cover, and forest types collectively affect SMB and enzymes. In this context, our study examined five temperate forest types (Pinus roxburghii, Quercus leucotrichophora, Q. floribunda, Q. semecarpifolia, and Cupressus torulosa) and two ground cover types (moss-covered and bare soil) to assess their impacts on SMBC, SMBN, and enzymatic activity in the Indian Central Himalayas during the rainy and winter seasons. SMBC and SMBN were quantified using the chloroform fumigation-extraction method, while enzymatic activity was assessed using established protocols. Forest types, ground cover, and seasons significantly influenced SMBC and enzymatic activity (p < 0.01). Forest and ground cover had substantial effects on SMBN (p < 0.01), while seasons had negligible effects (p > 0.05). Biochemical properties showcased higher values under moss-covered soil in the rainy season and bare soil in winter. C. torulosa forests, followed by Quercus -dominated forests, exhibited superior SMB and enzymatic activities compared to P. roxburghii forests. SMBC and SMBN varied across forest types, ranging from 58.54 to 1913.75 µg/g and 16.77 to 137.81 µg/g, respectively. Soil organic matter and moisture were key abiotic factors influencing soil biochemical properties. The results indicate that moss-covered soil in C. torulosa and Quercus -dominated forests appears promising for maintaining SMB and enzymatic activity, and should be preferred in forest management plans to improve microbial diversity and soil quality. Overall, this study deepens our understanding of soil enzymatic activity and microbial biomass dynamics in carbon and nitrogen cycling, and highlights the importance of moss ground cover as hotspots for ecosystem functioning. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
39. Correcting confounding canopy structure, biochemistry and soil background effects improves leaf area index estimates across diverse ecosystems from Sentinel-2 imagery.
- Author
-
Wan, Liang, Ryu, Youngryel, Dechant, Benjamin, Hwang, Yorum, Feng, Huaize, Kang, Yanghui, Jeong, Sungchan, Lee, Jeongho, Choi, Changhyun, and Bae, Joonhwan
- Subjects
- *
LEAF area index , *SOIL biochemistry , *ECOSYSTEMS , *RANDOM forest algorithms , *MACHINE learning - Abstract
High-spatiotemporal-resolution leaf area index (LAI) data are essential for sustainable agro-ecosystem management and precise disturbance detection. Previous LAI products were primarily derived from satellite data with limited spatiotemporal or spectral resolutions, which could be overcome with the use of Sentinel-2. While hybrid methods that integrate PROSAIL simulations with machine learning offer advantages in extracting high-spatiotemporal-resolution LAI from Sentinel-2, they still face challenges due to confounding factors related to canopy structure, leaf biochemistry, and soil background. To reduce impacts of these confounders, we developed an efficient hybrid method for Sentinel-2-based LAI retrieval. Our approach consists of random forest models trained on simulated datasets generated by PROSAIL-5B with two refinements: variable canopy fraction of fully senescent leaves (FS) and soil bidirectional reflectance factor (BRF) simulated by Brightness-Shape-Moisture (BSM) model. We corrected canopy BRF using near-infrared reflectance of vegetation (NIR V) and vegetation cover within mixed pixels (V C). For validation, we used ground measurements across different vegetation types from the Copernicus Ground Based Observations for Validation (GBOV) and Korea flux (KoFlux) sites during 2019–2023. Our results showed that coupling BSM and FS with PROSAIL-5B simulations improved hybrid LAI estimates, reducing RMSE by 10.8%–73.8%. Utilizing NIR V and V C to correct canopy BRF better quantified LAI in most vegetation types, with RMSE reduced by 15.3%–64.8%. Our hybrid method showed robust agreement with ground validation data from GBOV (R2 = 0.88, RMSE = 0.71) and KoFlux (R2 = 0.80, RMSE = 0.75). Overall, our method (R2 = 0.58–0.93, RMSE = 0.04–0.83) outperformed both the benchmark Sentinel Application Platform (R2 = 0.11–0.85, RMSE = 0.28–1.67) and data-driven (R2 = 0.09–0.85, RMSE = 0.29–0.93) algorithms in producing precise seasonal LAI data at finer resolutions. Our findings underscore the potential of the proposed hybrid method for high-spatiotemporal-resolution LAI retrieval across diverse ecosystems. [Display omitted] • Canopy fraction of senescent leaves and soil BRF model enhanced PROSAIL simulations. • Correcting BRF by NIR V and accounting for mixed pixels increased sensitivity to LAI. • Sentinel-2 BRF/NIR V , BRF M and BRF M /NIR VM outperformed BRF for hybrid LAI estimation. • Our hybrid method outperformed other relevant high-resolution LAI estimation methods. • Prior knowledge of LAI ranges and leaf angles improved hybrid LAI estimation. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
40. Exploration of silicate solubilizing bacteria for sustainable agriculture and silicon biogeochemical cycle.
- Author
-
Raturi, Gaurav, Sharma, Yogesh, Rana, Varnika, Thakral, Vandana, Myaka, Balaraju, Salvi, Prafull, Singh, Manish, Dhar, Hena, and Deshmukh, Rupesh
- Subjects
- *
BIOGEOCHEMICAL cycles , *SUSTAINABLE agriculture , *SOIL biochemistry , *SILICATES , *SILICON , *BIOCHEMISTRY , *SOLUBILIZATION - Abstract
Silicon (Si), a quasi-essential element for plants, is abundant in the soil typically as insoluble silicate forms. However, plants can uptake Si only in the soluble form of monosilicic acid. Production of monosilicic acid by rock-weathering mostly depends on temperature, pH, redox-potential, water-content, and microbial activities. In the present review, approaches involved in the efficient exploration of silicate solubilizing bacteria (SSB), its potential applications, and available technological advances are discussed. Present understanding of Si uptake, deposition, and subsequent benefits to plants has also been discussed. In agricultural soils, pH is found to be one of the most critical factors deciding silicate solubilization and the formation of different Si compounds. Numerous studies have predicted the role of Indole-3-Acetic Acid (IAA) and organic acids produced by SSB in silicate solubilization. In this regard, approaches for the isolation and characterization of SSB, quantification of IAA, and subsequent Si solubilization mechanisms are addressed. Phylogenetic evaluation of previously reported SSB showed a highly diverse origin which provides an opportunity to study different mechanisms involved in Si solubilization. Soil biochemistry in concern of silicon availability, microbial activity and silicon mediated changes in plant physiology are addressed. In addition, SSB's role in Si-biogeochemical cycling is summarized. The information presented here will be helpful to explore the potential of SSB more efficiently to promote sustainable agriculture. • Silicate solubilizing bacteria plays important role in silicon biogeochemical cycle. • Silicon is beneficial for plants, poultry birds, domestic animals and human. • Silicate solubilizing bacteria has potential to be used as biofertilizer. • Silicon fertilization has great environmental concerns. • Mechanism involved in silicate solubilization with bacterial activities. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
41. Development, optimisation and application of a solid phase system for microbial biosensor deployment in soils
- Author
-
Ma, Wei
- Subjects
580 ,Microbial biotechnology ,Soil biochemistry - Abstract
Potentially toxic elements (PTEs) are present in agricultural land due to diffuse and point source emissions. Because of their persistency, large quantities of PTEs have been accumulated in the soils. In the context of hazard assessment, traditionally, the PTEs have been assessed by measuring chemical concentrations or evaluating physical parameters. This fails to determine the availability of the PTEs to target biota. An assessment of the bioavailability of PTEs in environmental samples is of significant importance. In recent years, genetically engineered whole cell microbial biosensors have been applied as a tool in the assessment of the bioavailability of PTEs. The biosensors were comprehensively characterised and the bioassay procedure was optimised prior to deployment in soils. The overall objective of this study was to integrate the biosensor responses with chemical analysis and to evaluate the bioavailability and toxicity of PTEs from amended soil samples. To date, the application of microbial biosensors has relied solely on the extraction of soil waters and the subsequent exposure to test organisms. Bioavailability and toxicity of copper (Cu) and zinc (Zn) in soil waters extracted from artificially amended soils was studied in Chapters 5 and 6, respectively. Prior to application of the bioassay, the speciation of the Cu and Zn in soil waters was assessed. Both free ion concentrations of Cu and Zn dominated the bioavailable Cu and Zn fractions and represented the most toxic form in soil waters. After extraction of soil waters from the soil solid phase, the physico-chemical equilibrium may change and alter the PTEs speciation. The soil solid phase of this complex environment was likely to contain most of the labile and bioavailable fractions of PTEs. A novel yet representative solid phase contact assay provided an in situ procedure which allowed a direct contact between the microbial biosensors (test organisms) and the fraction of PTEs both sorbed to the soil solid phase and those dissolved in soil waters. To deploy the solid phase systems in amended soils, the bioavailability and toxicity of soil amended with Cu and Zn was measured. The bioavailable Cu and Zn concentrations predicted by the induced biosensors were, on average, one to ten orders of magnitude higher than those in soil waters (p < 0.05). The toxicity of Cu and Zn measured in the soil solid phase was, on average, one to two orders of magnitude higher than those in soil waters (p < 0.05). In the Cu study, the DGT (diffusive gradient in thin films) reflected the labile Cu concentration and accounted for 86% of the Cu in soil waters. This confirmed that Cu concentrations in soil waters were buffered from the resupply from the soil solid phase. Microbial biosensors provide a useful tool for assessing the PTEs bioavailability and toxicity in artificially amended soils. The data complemented the chemical analysis. This technology could be applied to historically contaminated soils and / or soils contaminated with a suite range of contaminant (e.g. organic compounds) by the deployment of the soil solid phase systems.
- Published
- 2013
42. Microbial Styrene Degradation
- Author
-
Dirk Tischler and Dirk Tischler
- Subjects
- Biodegradation, Soil biochemistry
- Abstract
This book describes the complex processes involved in styrene degradation by microbes, including highly adaptive microorganisms, the various enzymes involved in styrene biodegradation, new styrene-catabolic routes, novel regulatory mechanisms, and the genes coding for styrene metabolizing enzymes. Numerous biotechnological applications are discussed, such as the development of sustainable eco-friendly technologies as well as the use of styrene degrading microorganisms and their enzymes as a rich resource for biotechnology.
- Published
- 2015
43. Soil Microbiology, Ecology and Biochemistry
- Author
-
Eldor A. Paul and Eldor A. Paul
- Subjects
- Soil biochemistry, Soil microbiology, Soil ecology
- Abstract
The fourth edition of Soil Microbiology, Ecology and Biochemistry updates this widely used reference as the study and understanding of soil biota, their function, and the dynamics of soil organic matter has been revolutionized by molecular and instrumental techniques, and information technology. Knowledge of soil microbiology, ecology and biochemistry is central to our understanding of organisms and their processes and interactions with their environment. In a time of great global change and increased emphasis on biodiversity and food security, soil microbiology and ecology has become an increasingly important topic. Revised by a group of world-renowned authors in many institutions and disciplines, this work relates the breakthroughs in knowledge in this important field to its history as well as future applications. The new edition provides readable, practical, impactful information for its many applied and fundamental disciplines. Professionals turn to this text as a reference for fundamental knowledge in their field or to inform management practices. New section on'Methods in Studying Soil Organic Matter Formation and Nutrient Dynamics'to balance the two successful chapters on microbial and physiological methodologyIncludes expanded information on soil interactions with organisms involved in human and plant diseaseImproved readability and integration for an ever-widening audience in his fieldIntegrated concepts related to soil biota, diversity, and function allow readers in multiple disciplines to understand the complex soil biota and their function
- Published
- 2015
44. Biologically relevant characteristics of dissolved organic carbon (DOC) from soil
- Author
-
Bowen, Susan, Hopkins, David W., and Grieve, Ian C.
- Subjects
577.14 ,dissolved organic carbon ,DOC ,DOM ,dynamics of DOC biodegradation ,microbial decomposition of DOC ,Carbon compounds ,Soil biochemistry ,Biodegradation - Abstract
Of the organic matter in soils typically < 1% by weight is dissolved in the soil solution (dissolved organic matter; DOM). DOM is a continuum of molecules of various sizes and chemical structures which has largely been operationally defined as the fraction of total organic carbon in an aqueous solution that passes through a 0.45 µm filter. Although only representing a relatively small proportion, it represents the most mobile part of soil organic carbon and is probably enriched with highly labile compounds. DOM acts as a source of nutrients for both soil and aquatic micro-organisms, influences the fate and transport of organic and inorganic contaminants, presents a potential water treatment problem and may indicate the mobilisation rate of key terrestrial carbon stores. The objective of this research was to ascertain some of the biologically relevant characteristics of soil DOM and specifically to determine: (1) the influence of method and time of extraction of DOM from the soil on its biochemical composition and concentration; (2) the dynamics of DOM biodegradation; and, (3) the effects of repeated applications of trace amounts of DOM on the rate of soil carbon mineralization. To examine the influence of method and time of extraction on the composition and concentration of DOM, soil solution was collected from a raised peat bog in Central Scotland using water extraction, field suction lysimetry, and centrifugation techniques on a bimonthly basis over the period of a year (Aug 2003 – Jun 2004). Samples were analysed for dissolved organic carbon (DOC), dissolved organic nitrogen (DON), protein, carbohydrate and amino acid content. For all of the sampled months except June the biochemical composition of DOC varied with extraction method, suggesting the biological, chemical and/or physical influences on DOC production and loss are different within the differently sized soil pores. Water-extractable DOC generally contained the greatest proportion of carbohydrate, protein and/or amino acid of the three extraction methods. Time of extraction had a significant effect on the composition of water- and suction-extracted DOC: the total % carbohydrate + protein + amino acid C was significantly higher in Oct than Dec, Feb and Jun for water-extracted DOC and significantly greater in Dec than Aug, Apr and Jun for suction-extracted DOC. There was no significant change in the total % carbohydrate + protein + amino acid C of centrifuge-extracted DOC during the sampled year. Time of extraction also had a significant effect on the % protein + amino acid N in water- and centrifuge-extracted DON: Oct levels were significantly higher than Feb for water-extracted DON and significantly higher in Aug and Apr for centrifuge-extracted DON. Concentrations of total DOC and total DON were also found to be dependent on time of extraction. DOC concentrations showed a similar pattern of variation over the year for all methods of extraction, with concentrations relatively constant for most of the year, rising in April to reach a peak in Jun. DON concentrations in water- and centrifuge-extracted DON peaked later, in Aug. There were no significant seasonal changes in the concentration of suction-extracted DON. A lack of correlation between DOC and DON concentrations suggested that DOC and DON production and/or loss are under different controls. Laboratory-based incubation experiments were carried out to examine the dynamics of DOC biodegradation. Over a 70 day incubation period at 20oC, the DOM from two types of peat (raised and blanket) and four samples of a mineral soil (calcaric gleysol), each previously exposed to a different management strategy, were found to be comprised of a rapidly degradable pools (half-life: 3 – 8 days) and a more stable pool (half-life: 0.4 to 6 years). For all soil types/treatments, excepting raised peat, the total net loss of DOC from the culture medium was greater than could be accounted for by the process of mineralization alone. A comparison between net loss of DOC and loss of DOC to CO2 and microbial biomass determined by direct microscopy suggested that at least some of the differences between DOC mineralised and net DOC loss were due to microbial assimilation and release. Changes in the microbial biomass during the decomposition process showed proliferation followed by decline over 15 days. The protein and carbohydrate fractions showed a complex pattern of both degradation and production throughout the incubation. The effects of repeated applications of trace amounts of litter-derived DOC on the rate of carbon mineralization over a 35 day period were investigated in a laboratory based incubation experiment. The addition of trace amounts of litter-derived DOC every 7 and 10.5 days appeared to ‘trigger’ microbial activity causing an increase in CO2 mineralisation such that extra C mineralised exceeded DOC additions by more than 2 fold. Acceleration in the rate of extra C mineralised 7 days after the second addition suggested that either the microbial production of enzymes responsible for biodegradation and/or an increase in microbial biomass, are only initiated once a critical concentration of a specific substrate or substrates has been achieved. The addition of ‘DOC + nutrients’ every 3.5 days had no effect on the total rate of mineralization. To date DOC has tended to be operationally defined according to its chemical and physical properties. An understanding of the composition, production and loss of DOC from a biological perspective is essential if we are to be able to predict the effects of environmental change on the rate of mineralization of soil organic matter. This research has shown that the pools of DOC extracted, using three different methods commonly used in current research, are biochemically distinct and respond differently to the seasons. This suggests some degree of compartmentalisation of biological processes within the soil matrix. The observed similarities between the characteristics of the decomposition dynamics of both peatland and agricultural DOC suggests that either there is little difference in substrate quality between the two systems or that the microbial community have adapted in each case to maximise their utilisation of the available substrate. The dependency of the concentration and biochemical composition of DOC on the seasons requires further work to ascertain which biotic and/or abiotic factors are exerting control. Published research has focussed on factors such as temperature, wet/dry cycles, and freeze/thawing. The effect of the frequency of doses of trace amounts of DOC on increasing the rate of soil organic C mineralization, evident from this research, suggests that the interval between periods of rainfall may be relevant. It also emphasises how it can be useful to use knowledge of a biological process as the starting point in determining which factors may be exerting control on DOC production and loss.
- Published
- 2006
45. Invasive earthworms reduce chemical defense and increase herbivory and pathogen infection in native trees.
- Author
-
Thakur, Madhav P., Künne, Tom, Unsicker, Sybille B., Biere, Arjen, Ferlian, Olga, Pruschitzki, Ulrich, Thouvenot, Lise, Türke, Manfred, Eisenhauer, Nico, and Oduor, Ayub
- Subjects
- *
EARTHWORMS , *SOIL invertebrates , *SOIL biochemistry , *POPULUS tremuloides , *NATIVE plants , *TREES , *MYCOSES , *PLANT defenses - Abstract
Recent research shows that earthworms can alter defense traits of plants against herbivores and pathogens by affecting soil biochemistry. Yet, the effects of invasive earthworms on defense traits of native plants from previously earthworm‐free ecosystems as well as the consequences for multitrophic interactions are virtually unknown.Here we use a combination of an observational study and a complementary experimental study to investigate the effects of invasive earthworms on leaf defense traits, herbivore damage and pathogen infection in two poplar tree species (Populus balsamifera and Populus tremuloides) native to North American boreal forests.Our observational study showed that earthworm invasion was associated with enhanced leaf herbivory (by leaf‐chewing insects) in saplings of both tree species. However, we only detected significant shifts in the concentration of chemical defense compounds in response to earthworm invasion for P. balsamifera. Specifically, leaf phenolic concentrations, including salicinoids and catechin, were lower in P. balsamifera from earthworm‐invaded sites.Our experimental study confirmed an earthworm‐induced reduction in leaf defense levels in P. balsamifera for one of the defense compounds, tremulacin. The experimental study additionally showed that invasive earthworms reduced leaf dry matter content, potentially increasing leaf palatability, and enhanced susceptibility of trees to infection by a fungal pathogen, but not to aphid infestation, in the same tree species.Synthesis. Our results show that invasive earthworms can decrease the concentrations of some chemical defense compounds in P. balsamifera, which could make them susceptible to leaf‐chewing insects. Such potential impacts of invasive earthworms are likely to have implications for tree survival and competition, native tree biodiversity and ecosystem functioning. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
46. Biochemical indicators drive soil quality in integrated crop–livestock–forestry systems.
- Author
-
de Menezes Sousa Zago, Leciana, Ramalho, Werther Pereira, de Melo Silva-Neto, Carlos, and Caramori, Samantha Salomão
- Subjects
SOIL quality ,GRASSLAND soils ,PHENOL oxidase ,SUSTAINABLE agriculture ,SOIL biochemistry ,SOIL chemistry - Abstract
Integrated crop, livestock, and forestry systems (iCLF) have been widely heralded as a sustainable farming method in comparison to conventional pastures. However, intensive soil use and management modify ecosystem function, particularly biogeochemical cycling. The aim of this study was to determine whether there are changes in soil chemistry or biochemistry after the conversion of pasture into iCLF in the Brazilian Cerrado. Additionally, we compared three iCLF areas initiated 3, 5, and 8 years before this study to test the effect of time since conversion to iCLF (age) on soil chemistry and biochemistry and on microbial carbon (C). Conventional pasture and native Cerrado soils were used as controls. Microbial C and biochemical activity were dependent on the plant cover and age of the iCLF, but soil physicochemical properties were sensitive only to the agroecosystem type. Enzyme activity and microbial C were higher in native Cerrado soils, followed by iCLF and pasture soils, respectively. There was an inverse relationship between iCLF age and microbial C and β-Glucosidase and phenol oxidase activities. The results suggest that the response of the microbial community depends on the soil composition and the iCLF age. Nutrient cycling in iCLF increases with age of the system and varies by management subtype within the iCLF (i.e., forestry or grazing areas). The implementation of iCLF changes soil conditions, which generates a positive response in the microbial community. The adoption of iCLF increases microbial activity and enhances soil quality over short–medium timescales (5 years). [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
47. Boron dynamics in soil: classification, sources, factors, fractions, and kinetics.
- Author
-
Das, Ayan Kumar and Purkait, Aloke
- Subjects
- *
SOIL classification , *BOTANICAL chemistry , *SOIL biochemistry , *SOIL degradation , *BORON - Abstract
Degradation of soil micronutrient fertility status is an increasingly serious problem damaging the sustainability of modern agriculture. In this article, an attempt has been made to present some of the significant features of boron (B) in relation to soil nutrition including soil biochemistry and plant root uptake kinetics. Interests in B research have been sparked by the problem of deficiency and toxicity resulting from shortage and oversupply of the nutrient. Both deficiency and toxicity of B may be related to the total concentration of B in the soil, however, these problems arise from the chemical forms of B present in the soil, particularly its solubility, and availability to plants. The natural soil conditions as well as different soil-management practices have a marked influence on the fractions of B present in the soil and its availability. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
48. Changes in Soil Biochemical Properties along Different Land Uses of Mizoram, Northeast India.
- Author
-
Singh, Ngangbam Somen, Ovung, Etsoshan Y., and Tripathi, S. K.
- Subjects
SOIL biochemistry ,LAND use ,AGRICULTURAL ecology ,TEMPERATE forests - Published
- 2020
49. Soil Fungal Communities Investigated by Metabarcoding Within Simulated Forensic Burial Contexts.
- Author
-
Procopio, Noemi, Ghignone, Stefano, Voyron, Samuele, Chiapello, Marco, Williams, Anna, Chamberlain, Andrew, Mello, Antonietta, and Buckley, Michael
- Subjects
FUNGAL communities ,SOILS ,SOIL biochemistry ,MICROORGANISM populations ,SOIL sampling ,BACTERIAL population ,MICROBIAL ecology - Abstract
Decomposition of animal bodies in the burial environment plays a key role in the biochemistry of the soil, altering the balance of the local microbial populations present before the introduction of the carcass. Despite the growing number of studies on decomposition and soil bacterial populations, less is known on its effects on fungal communities. Shifts in the fungal populations at different post-mortem intervals (PMIs) could provide insights for PMI estimation and clarify the role that specific fungal taxa have at specific decomposition stages. In this study, we buried pig carcasses over a period of 1- to 6-months, and we sampled the soil in contact with each carcass at different PMIs. We performed metabarcoding analysis of the mycobiome targeting both the internal transcribed spacer (ITS) 1 and 2, to elucidate which one was more suitable for this purpose. Our results showed a decrease in the fungal taxonomic richness associated with increasing PMIs, and the alteration of the soil fungal signature even after 6 months post-burial, showing the inability of soil communities to restore their original composition within this timeframe. The results highlighted taxonomic trends associated with specific PMIs, such as the increase of the Mortierellomycota after 4- and 6-months and of Ascomycota particularly after 2 months, and the decrease of Basidiomycota from the first to the last time point. We have found a limited number of taxa specifically associated with the carrion and not present in the control soil, showing that the major contributors to the recorded changes are originated from the soil and were not introduced by the carrion. As this is the first study conducted on burial graves, it sets the baseline for additional studies to investigate the role of fungal communities on prolonged decomposition periods and to identify fungal biomarkers to improve the accuracy of PMI prediction for forensic applications. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
50. Impact of Nonylphenols on Biological Activity of Loamy Soddy-Podzolic Soil.
- Author
-
Zaytseva, T. B., Zinoveva, S. V., Kuzikova, I. L., Russu, A. D., Chugunova, M. V., and Medvedeva, N. G.
- Subjects
- *
NONYLPHENOL , *HIGH performance liquid chromatography , *SOIL respiration , *SOIL enzymology , *SOIL biochemistry - Abstract
The effect of the endocrine disruptor nonylphenol on the biological activity of loamy soddy-podzolic soil (Eutric Albic Retisol (Abruptic, Loamic, Aric, Ochric)) was studied in model experiments. The upper horizons of loamy soddy-podzolic soil sampled in Leningrad oblast were the object of this study. The number of soil microorganisms, the activity of soil enzymes, and soil respiration were determined with the methods commonly used in soil microbiology and biochemistry. The content of nonylphenol in soil samples was determined using high-performance liquid chromatography. Soil contamination with nonylphenol was shown to cause time- and dose-dependent changes in the activity of the pool of nitrogen, carbohydrates, and redox enzymes and increases the basal respiration. The results obtained are an important stage necessary for risk assessment of soil contamination with alkylphenols, and can be used in the development of a remediation methodology for soils contaminated with endocrine disruptors. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
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