1,205 results on '"SUGAR TRANSPORT"'
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2. The varying responses of leaves and roots and the link between sugar metabolic genes and the SWEET family in Dendrobium officinale under salt stress.
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Hao, Li, Shi, Xin, Wen, Shiyu, Chen, Jiaqiang, Luo, Kexin, Chen, Yaqi, Yue, Samo, Yang, Caiye, Sun, Yanxia, and Zhang, Yi
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LIFE sciences , *CHINESE medicine , *BOTANY , *PLANT cells & tissues , *GENE families , *DENDROBIUM - Abstract
Background: Dendrobium officinale Kimura et Migo is a perennial epiphytic herb in traditional Chinese medicine, showing remarkable resistance to salt stress. Water-soluble sugars serve as important osmoprotectants and play crucial roles in plant stress responses. Previous studies have primarily focused on sugar metabolism in individual tissues under stress, resulting in a limited understanding of the regulatory differences between tissues and the relationship between sugar metabolism and transport. Results: A variety of salt-responsive genes were identified through transcriptome analysis of D. officinale. GO and KEGG enrichment analyses revealed functional differences among the differentially expressed genes (DEGs) between leaves and roots. Expression analysis indicated that sugar metabolic genes and D. officinale Sugars Will Eventually be Exported Transporters (DoSWEETs) displayed distinct expression patterns in leaves and roots under salt stress. Most sugar metabolic genes were up-regulated in the leaves and down-regulated in the roots in response to salt, while DoSWEETs predominantly responded in the roots. Specifically, DoSWEET2a, 6a, 12a, 14, and 16 were confirmed via RT-qPCR. Additionally, positive correlations were observed between certain genes (scrK, INV, SUS) and DoSWEETs, with INV (LOC110096666) showing a strong positive correlation with all detected DoSWEETs in both leaves and roots. Conclusions: Our findings not only illustrated the distinct responses of leaves and roots to salt stress, but also highlighted the relationship between sugar metabolic genes and DoSWEETs in adapting to such stress. This enhances our understanding of the differential responses of plant tissues to salt stress and identified candidate genes for salt-resistance breeding in D. officinale. [ABSTRACT FROM AUTHOR]
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- 2024
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3. Fast and simple fluorometric measurement of phloem loading exposes auxin‐dependent regulation of Arabidopsis sucrose transporter AtSUC2.
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Ren, Yunjuan, Zhang, Ziyu, Zhanakhmetova, Diana, Li, Wenhui, Chen, Shaolin, Werner, Tomáš, and Liesche, Johannes
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PLANT exudates , *CARBON isotopes , *CARRIER proteins , *GENETIC transcription regulation , *PHLOEM - Abstract
SUMMARY: The rate of sucrose export from leaves is a major factor in balancing whole‐plant carbon and energy partitioning. A comprehensive study of its dynamics and relationship to photosynthesis, sink demand, and other relevant processes is hampered by the shortcomings of current methods for measuring sucrose phloem loading. We utilize the ability of sucrose transporter proteins, known as SUCs or SUTs, to specifically transport the fluorescent molecule esculin in a novel assay to measure phloem loading rates. Esculin was administered to source leaves and its fluorescence in the leaf extract was measured after 1 or 2 h. Dicot plants with an active phloem loading strategy showed an export‐dependent reduction of esculin fluorescence. Relative leaf esculin export rates correlated with leaf export rates of isotopic carbon and phloem exudate sucrose levels. We used esculin experiments to examine the effects of phytohormones on phloem loading in Arabidopsis, showing, for example, that auxin induces phloem loading while cytokinin reduces it. Transcriptional regulation of AtSUC2 by AUXIN RESPONSE FACTOR1 (ARF1) corroborated the link between auxin signaling and phloem loading. Unlike established methods, the esculin assay is rapid and does not require specialized equipment. Potential applications and limitations of the esculin assay are discussed. [ABSTRACT FROM AUTHOR]
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- 2024
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4. Sucrose-responsive osmoregulation of plant cell size by a long non-coding RNA.
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Hajný, Jakub, Trávníčková, Tereza, Špundová, Martina, Roenspies, Michelle, Rony, R.M. Imtiaz Karim, Sacharowski, Sebastian, Krzyszton, Michal, Zalabák, David, Hardtke, Christian S., Pečinka, Aleš, Puchta, Holger, Swiezewski, Szymon, van Norman, Jaimie M., and Novák, Ondřej
- Abstract
In plants, sugars are the key source of energy and metabolic building blocks. The systemic transport of sugars is essential for plant growth and morphogenesis. Plants evolved intricate molecular networks to effectively distribute sugars. The dynamic distribution of these osmotically active compounds is a handy tool for regulating cell turgor pressure, an instructive force in developmental biology. In this study, we have investigated the molecular mechanism behind the dual role of the receptor-like kinase CANAR. We functionally characterized a long non-coding RNA, CARMA , as a negative regulator of CANAR. Sugar-responsive CARMA specifically fine-tunes CANAR expression in the phloem, the route of sugar transport. Our genetic, molecular, microscopy, and biophysical data suggest that the CARMA–CANAR module controls the shoot-to-root phloem transport of sugars, allows cells to flexibly adapt to the external osmolality by appropriate water uptake, and thus adjust the size of vascular cell types during organ growth and development. Our study identifies a nexus of plant vascular tissue formation with cell internal pressure monitoring, revealing a novel functional aspect of long non-coding RNAs in developmental biology. This study shows that the CARMA–CANAR module acts as a novel osmoregulatory system controlling cell size in the root stele in response to external osmolality. CANAR activity regulates the shoot-to-root phloem transport of sugars, which influences internal pressure via cellular water uptake and thus cell size. [ABSTRACT FROM AUTHOR]
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- 2024
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5. The varying responses of leaves and roots and the link between sugar metabolic genes and the SWEET family in Dendrobium officinale under salt stress
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Li Hao, Xin Shi, Shiyu Wen, Jiaqiang Chen, Kexin Luo, Yaqi Chen, Samo Yue, Caiye Yang, Yanxia Sun, and Yi Zhang
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Transcriptome ,Tissue-specific response ,Sugar biosynthesis ,Sugar transport ,Biotechnology ,TP248.13-248.65 ,Genetics ,QH426-470 - Abstract
Abstract Background Dendrobium officinale Kimura et Migo is a perennial epiphytic herb in traditional Chinese medicine, showing remarkable resistance to salt stress. Water-soluble sugars serve as important osmoprotectants and play crucial roles in plant stress responses. Previous studies have primarily focused on sugar metabolism in individual tissues under stress, resulting in a limited understanding of the regulatory differences between tissues and the relationship between sugar metabolism and transport. Results A variety of salt-responsive genes were identified through transcriptome analysis of D. officinale. GO and KEGG enrichment analyses revealed functional differences among the differentially expressed genes (DEGs) between leaves and roots. Expression analysis indicated that sugar metabolic genes and D. officinale S ugars W ill E ventually be E xported T ransporters (DoSWEETs) displayed distinct expression patterns in leaves and roots under salt stress. Most sugar metabolic genes were up-regulated in the leaves and down-regulated in the roots in response to salt, while DoSWEETs predominantly responded in the roots. Specifically, DoSWEET2a, 6a, 12a, 14, and 16 were confirmed via RT-qPCR. Additionally, positive correlations were observed between certain genes (scrK, INV, SUS) and DoSWEETs, with INV (LOC110096666) showing a strong positive correlation with all detected DoSWEETs in both leaves and roots. Conclusions Our findings not only illustrated the distinct responses of leaves and roots to salt stress, but also highlighted the relationship between sugar metabolic genes and DoSWEETs in adapting to such stress. This enhances our understanding of the differential responses of plant tissues to salt stress and identified candidate genes for salt-resistance breeding in D. officinale.
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- 2024
- Full Text
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6. SWEET genes responsible for sugar transport in plant: A review
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Hongmei WANG, Zhaocong ZHANG, Kun LIU, Fang XUE, Jie HAN, Hui ZHAO, and Silong CHEN
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genetic engineering ,sugar transport ,sweet ,structure characteristics ,biological functions ,Technology - Abstract
Sugars will eventually be exported transporter (SWEET) is a novel class of sugars transporter families which mainly mediate either sucrose or hexose translocation bidirectional across the cellular membranesfollowinga concentrating gradient with a passive diffusion patten. In higher plants, SWEET proteins commonly have seven transmembrane domains that form a pore in the membrane to allow the passage of sugars, containing two MtN3/Saliva domains. Phylogenetically, plant SWEETs are divided into four clades. SWEET transporters play important roles in diverse physiological and biochemical processes including phloem loading, plant hormone transportand vegetative growth. In this review, based on the current advance of the plant SWEET transporters, we summarized their discovery, structure characteristicsand biological functions, and pointed out current research problems. Finally,put forward several better future research directions and potential solutions for SWEET sugar transporters in plant from the following three aspects: 1) exploring the molecular mechanism of substrate recognition and selectivity of SWEET proteins; 2) mining and utilizing of key SWEET genes increasing crop yield and improving quality; 3) using gene editing technology and phosphorylation of SWEET transporters to engineer high-yielding and high-quality crops.
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- 2024
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7. Genome-Wide Identification and Characterization of Sugar Transporter Genes in Silver Birch.
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Korzhenevskyi, M. A., Moshchenskaya, Yu. L., Tarelkina, T. V., and Galibina, N. A.
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TRANSMEMBRANE domains , *EUROPEAN white birch , *GENE families , *WOODY plants , *BIOTECHNOLOGY - Abstract
Sugar transporters play an important role in regulating the long-distance sucrose transport from source to sink organs. The main sucrose absorber in woody plants is developing wood. Thus, sucrose transport, regulated by SUT, SWEET, and MST gene families, will determine the formation of woody biomass. Based on silver birch (Betula pendula var. pendula Roth) genomic data, we identified and analyze encoding sugar transporters in Betula pendula. We conducted BLAST-search, phylogenetic, structural analysis and analysis of cis-acting elements of sugar transporter genes and determined their chromosomal localization. We were able to identify and characterize 3 genes of the SUT family, 10 SWEET genes and 36 MST genes, which have a typical number of functional and transmembrane domains for the family. It was shown that silver birch contains a smaller number of sugar transporters genes compared to A. thaliana, which is probably because of the apoplastic type of terminal phloem loading in Arabidopsis, while in silver birch phloem loading is carried out predominantly symplastically. The results obtained may be useful for further study of the participation of sucrose transporters in various biosynthetic processes in woody plants and provide a basis for various biotechnological manipulations. [ABSTRACT FROM AUTHOR]
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- 2024
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8. Abscisic acid controls sugar accumulation essential to strawberry fruit ripening via the FaRIPK1‐FaTCP7‐FaSTP13/FaSPT module.
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Chen, Xuexue, Gao, Jiahui, and Shen, Yuanyue
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FRUIT ripening , *TRANSCRIPTION factors , *ABSCISIC acid , *SUGAR phosphates , *GENE silencing - Abstract
SUMMARY: Strawberry is considered as a model plant for studying the ripening of abscisic acid (ABA)‐regulated non‐climacteric fruits, a process in which sugar plays a fundamental role, while how ABA regulates sugar accumulation remains unclear. This study provides a direct line of physiological, biochemical, and molecular evidence that ABA signaling regulates sugar accumulation via the FaRIPK1‐FaTCP7‐FaSTP13/FaSPT signaling pathway. Herein, FaRIPK1, a red‐initial protein kinase 1 previously identified in strawberry fruit, not only interacted with the transcription factor FaTCP7 (TEOSINTE BRANCHEN 1, CYCLOIDEA, and PCF) but also phosphorylated the critical Ser89 and Thr93 sites of FaTCP7, which negatively regulated strawberry fruit ripening, as evidenced by the transient overexpression (OE) and virus‐induced gene silencing transgenic system. Furthermore, the DAP‐seq experiments revealed that FvTCP7 bound the motif "GTGGNNCCCNC" in the promoters of two sugar transporter genes, FaSTP13 (sugar transport protein 13) and FaSPT (sugar phosphate/phosphate translocator), inhibiting their transcription activities as determined by the electrophoretic mobility shift assay, yeast one‐hybrid, and dual‐luciferase reporter assays. The downregulated FaSTP13 and FaSPT transcripts in the FaTCP7‐OE fruit resulted in a reduction in soluble sugar content. Consistently, the yeast absorption test revealed that the two transporters had hexose transport activity. Especially, the phosphorylation‐inhibited binding of FaTCP7 to the promoters of FaSTP13 and FaSPT could result in the release of their transcriptional activities. In addition, the phosphomimetic form FaTCP7S89D or FaTCP7T93D could rescue the phenotype of FaTCP7‐OE fruits. Importantly, exogenous ABA treatment enhanced the FaRIPK1–FaTCP7 interaction. Overall, we found direct evidence that ABA signaling controls sugar accumulation during strawberry fruit ripening via the "FaRIPK1‐FaTCP7‐FaSTP13/FaSPT" module. Significance Statement: We unravel a novel abscisic acid signaling transduction pathway in sugar transport via "FaRIPK1‐FaTCP7‐FaSTP13/FaSPT," which channels to strawberry fruit ripening. [ABSTRACT FROM AUTHOR]
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- 2024
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9. 植物 SWEET 基因及其糖转运功能研究进展.
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王鸿梅, 张召聪, 刘 坤, 薛 芳, 韩 洁, 赵 慧, and 陈四龙
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TRANSMEMBRANE domains ,CELL membranes ,SUGAR crops ,GENOME editing ,CROP yields - Abstract
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- 2024
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10. Key amino acid residues govern the substrate selectivity of the transporter Xltr1p from Trichoderma reesei for glucose, mannose, and galactose
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Wei Ma, Shiyu Yuan, Zixian Wang, Kangle Niu, Fengyi Li, Lulu Liu, Lijuan Han, and Xu Fang
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Hexose transporter ,Glucose ,Galactose ,Mannose ,Transmembrane α-helix 7 ,Sugar transport ,Biotechnology ,TP248.13-248.65 ,Microbiology ,QR1-502 - Abstract
This research identified four amino acid residues (Leu174, Asn297, Tyr301, and Gln291) that contribute to substrate recognition by the high-affinity glucose transporter Xltr1p from Trichoderma reesei. Potential hotspots affecting substrate specificity were selected through homology modeling, evolutionary conservation analyses, and substrate-docking modeling of Xltr1p. Variants carrying mutations at these hotspots were subsequently obtained via in silico screening. Replacement of Leu174 or Asn297 in Xltr1p with alanine resulted in loss of hexose transport activity, indicating that Leu174 and Asn297 play essential roles in hexose transport. The Y301W variant exhibited accelerated mannose transport, but lost galactose transport capacity, and mutation of Gln291 to alanine greatly accelerated mannose transport. These results suggest that amino acids located in transmembrane α-helix 7 (Asn297, Tyr301, and Gln291) play critical roles in substrate recognition by the hexose transporter Xltr1p. Our results will help expand the potential applications of this transporter and provide insights into the mechanisms underlying its function and specificity.
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- 2024
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11. SlZIP11 mediates zinc accumulation and sugar storage in tomato fruits.
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Sun, Jiaqi, Wang, Manning, Zhang, Xinsheng, Liu, Xin, and Jiang, Jing
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TOMATOES ,AGRICULTURE ,FRUIT storage ,FRUIT ripening ,FRUIT development ,CARRIER proteins - Abstract
Background: Zinc (Zn) is a vital micronutrient essential for plant growth and development. Transporter proteins of the ZRT/IRT-like protein (ZIP) family play crucial roles in maintaining Zn homeostasis. Although the acquisition, translocation, and intracellular transport of Zn are well understood in plant roots and leaves, the genes that regulate these pathways in fruits remain largely unexplored. In this study, we aimed to investigate the function of SlZIP11 in regulating tomato fruit development. Methods: We used Solanum lycopersicum L. 'Micro-Tom' SlZIP11 (Solanum lycopersicum) is highly expressed in tomato fruit, particularly in mature green (MG) stages. For obtaining results, we employed reverse transcription-quantitative polymerase chain reaction (RT-qPCR), yeast two-hybrid assay, bimolecular fluorescent complementation, subcellular localization assay, virus-induced gene silencing (VIGS), SlZIP11 overexpression, determination of Zn content, sugar extraction and content determination, and statistical analysis. Results: RT-qPCR analysis showed elevated SlZIP11 expression in MG tomato fruits. SlZIP11 expression was inhibited and induced by Zn deficiency and toxicity treatments, respectively. Silencing SlZIP11 via the VIGS technology resulted in a significant increase in the Zn content of tomato fruits. In contrast, overexpression of SlZIP11 led to reduced Zn content in MG fruits. Moreover, both silencing and overexpression of SlZIP11 caused alterations in the fructose and glucose contents of tomato fruits. Additionally, SlSWEEET7a interacted with SlZIP11. The heterodimerization between SlSWEET7a and SlZIP11 affected subcellular targeting, thereby increasing the amount of intracellularly localized oligomeric complexes. Overall, this study elucidates the role of SlZIP11 in mediating Zn accumulation and sugar transport during tomato fruit ripening. These findings underscore the significance of SlZIP11 in regulating Zn levels and sugar content, providing insights into its potential implications for plant physiology and agricultural practices. [ABSTRACT FROM AUTHOR]
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- 2024
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12. Correlating sugar transporter expression and activities to identify transporters for an orphan sugar substrate
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Tamayo, Elisabeth, Nada, Basant, Hafermann, Isabell, and Benz, J. Philipp
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- 2024
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13. On the mechanism for winter stem pressure build-up in walnut trees.
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Bozonnet, Cyril, Saudreau, Marc, Badel, Eric, Charrier, Guillaume, and Améglio, Thierry
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WALNUT , *TREE mortality , *CARDIOVASCULAR system , *HYDRAULIC conductivity , *PRESSURE vessels , *XYLEM , *WINTER - Abstract
Xylem embolism is a significant factor in tree mortality. Restoration of hydraulic conductivity after massive embolization of the vascular system requires the application of positive pressure to the vessels and/or the creation of new conductive elements. Some species generate positive pressure from the root system to propagate pressure in distal, aboveground organs in spring, whereas other species generate positive pressure locally at the stem level during winter. We provide a mechanistic explanation for winter stem pressure build-up in the walnut tree. We have developed a physical model that accounts for temperature fluctuations and phase transitions. This model is based on the exchange of water and sugars between living cells and vessels. Our computations demonstrate that vessel pressurization can be attributed to the transfer of water between vessels across the parenchyma rays, which is facilitated by a radial imbalance in sugar concentration. The ability to dispose of soluble sugars in living cells, and to transport them between living cells and up to the vessels, is identified as the main drivers of stem pressure build-up in the walnut tree. [ABSTRACT FROM AUTHOR]
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- 2024
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14. Physiological Investigation and Transcriptome Analysis Reveals the Mechanisms of Setaria italica 's Yield Formation under Heat Stress.
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Hu, Manicao, Yang, Meng, Liu, Jingyang, Huang, Haozhe, Luan, Ruiwei, Yue, Hongliang, and Zhang, Caixia
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FOXTAIL millet , *HEAT of formation , *PHYSIOLOGICAL effects of heat , *PLANT breeding , *TRANSCRIPTOMES , *CROP yields - Abstract
Setaria italica is an important crop in China that plays a vital role in the Chinese dietary structure. In the last several decades, high temperature has become the most severe climate issue in the world, which causes great harm to the yield and quality formation of millet. In this study, two main cultivated varieties (ZG2 and AI88) were used to explore the photosynthesis and yield index of the whole plant under heat stress. Results implied that photosynthesis was not inhibited during the heat stress, and that the imbalance in sugar transport between different tissues may be the main factor that affects yield formation. In addition, the expression levels of seven SiSUT and twenty-four SiSWEET members were explored. Sugar transporters were heavily affected during the heat stress. The expression of SiSWEET13a was inhibited by heat stress in the stems, which may play a vital role in sugar transport between different tissues. These results provide new insights into the yield formation of crops under heat stress, which will provide guidance to crop breeding and cultivation. [ABSTRACT FROM AUTHOR]
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- 2024
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15. Profiling Cell Heterogeneity and Fructose Transporter Expression in the Rat Nephron by Integrating Single-Cell and Microdissected Tubule Segment Transcriptomes.
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Zhang, Ronghao, Jadhav, Darshan Aatmaram, Kim, Najeong, Kramer, Benjamin, and Gonzalez-Vicente, Agustin
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PROXIMAL kidney tubules , *FRUCTOSE , *KIDNEY tubules , *TRANSCRIPTOMES , *RNA sequencing , *HETEROGENEITY - Abstract
Single-cell RNA sequencing (scRNAseq) is a crucial tool in kidney research. These technologies cluster cells based on transcriptome similarity, irrespective of the anatomical location and order within the nephron. Thus, a transcriptome cluster may obscure the heterogeneity of the cell population within a nephron segment. Elevated dietary fructose leads to salt-sensitive hypertension, in part, through fructose reabsorption in the proximal tubule (PT). However, the organization of the four known fructose transporters in apical PTs (SGLT4, SGLT5, GLUT5, and NaGLT1) remains poorly understood. We hypothesized that cells within each subsegment of the proximal tubule exhibit complex, heterogeneous fructose transporter expression patterns. To test this hypothesis, we analyzed rat kidney transcriptomes and proteomes from publicly available scRNAseq and tubule microdissection databases. We found that microdissected PT-S1 segments consist of 81% ± 12% cells with scRNAseq-derived transcriptional characteristics of S1, whereas PT-S2 express a mixture of 18% ± 9% S1, 58% ± 8% S2, and 19% ± 5% S3 transcripts, and PT-S3 consists of 75% ± 9% S3 transcripts. The expression of all four fructose transporters was detectable in all three PT segments, but key fructose transporters SGLT5 and GLUT5 progressively increased from S1 to S3, and both were significantly upregulated in S3 vs. S1/S2 (Slc5a10: 1.9 log2FC, p < 1 × 10−299; Scl2a5: 1.4 log2FC, p < 4 × 10−105). A similar distribution was found in human kidneys. These data suggest that S3 is the primary site of fructose reabsorption in both humans and rats. Finally, because of the multiple scRNAseq transcriptional phenotypes found in each segment, our findings also imply that anatomical labels applied to scRNAseq clusters may be misleading. [ABSTRACT FROM AUTHOR]
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- 2024
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16. pOsHAK1:OsSUT1 Promotes Sugar Transport and Enhances Drought Tolerance in Rice.
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Chen, Guang, Lian, Wenli, Geng, Anjing, Wang, Yihan, Liu, Minghao, Zhang, Yue, and Wang, Xu
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DROUGHT tolerance , *RICE , *SEEDLINGS , *TRANSGENIC plants , *GENE expression , *SUGAR - Abstract
Plant cells accumulate osmotic substances (e.g., sugar) to protect cell components and maintain osmotic balance under drought stress conditions. Previous studies found that pOsHAK1:OsFLN2 promotes sugar metabolism and improves the drought tolerance of rice plants under drought stress. This study further evaluated the effect of the ectopic expression of the OsSUT1 gene driven by the OsHAK1 promoter on the sugar transport and drought tolerance of rice. The results showed that the net photosynthetic rate and sucrose phosphate synthase activity of plants expressing the OsSUT1 gene were not significantly different from those of wild-type (WT) rice plants under drought conditions. However, the sucrose transport rate in the phloem increased in the transgenic plants, and the sucrose contents were significantly lower in the leaves but significantly higher in the roots of transgenic plants than those in WT plants. The pOsHAK1:OsSUT1 and pOsHAK1:OsFLN2 transgenic lines had similar rates of long-distance sucrose transport and drought tolerance, which were higher than those of the WT plants. The relative water content of the transgenic plants was higher, while their water loss rate, hydrogen peroxide (H2O2), and malondialdehyde (MDA) contents were lower than those of the WT plants. The stress-responsive gene OsbZIP23 and the antioxidant-related gene OsCATB were significantly upregulated in the drought-treated transgenic lines, while the senescence indicator gene SGR and the stress-responsive gene OsNAC2 were down-regulated compared to WT plants. These results showed that promoting the long-distance sugar transport through the expression of pOsHAK1:OsSUT1 could produce an improved drought tolerance effect similar to that of pOsHAK1:OsFLN2, providing an effective way to improve the drought tolerance of cereal crops at the seedling stage. [ABSTRACT FROM AUTHOR]
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- 2024
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17. Single-cell RNA-seq reveals a link of ovule abortion and sugar transport in Camellia oleifera.
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Songzi Zhao and Jun Rong
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OVULES ,CAMELLIA oleifera ,ABORTION ,RNA sequencing ,PERICARP ,SUGAR - Abstract
Camellia oleifera is the most important woody oil crop in China. Seed number per fruit is an important yield trait in C. oleifera. Ovule abortion is generally observed in C. oleifera and significantly decreases the seed number per fruit. However, the mechanisms of ovule abortion remain poorly understood at present. Single-cell RNA sequencing (scRNA-seq) was performed using mature ovaries of two C. oleifera varieties with different ovule abortion rates (OARs). In total, 20,526 highquality cells were obtained, and 18 putative cell clusters were identified. Six cell types including female gametophyte, protoxylem, protophloem, procambium, epidermis, and parenchyma cells were identified from three main tissue types of ovule, placenta, and pericarp inner layer. A comparative analysis on scRNA-seq data between high- and low-OAR varieties demonstrated that the overall expression of CoSWEET and CoCWINV in procambium cells, and CoSTP in the integument was significantly upregulated in the low-OAR variety. Both the infertile ovule before pollination and the abortion ovule producing after compatible pollination might be attributed to selective abortion caused by low sugar levels in the apoplast around procambium cells and a low capability of hexose uptake in the integument. Here, the first single-cell transcriptional landscape is reported in woody crop ovaries. Our investigation demonstrates that ovule abortion may be related to sugar transport in placenta and ovules and sheds light on further deciphering the mechanism of regulating sugar transport and the improvement of seed yield in C. oleifera. [ABSTRACT FROM AUTHOR]
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- 2024
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18. Transport of N-acetylchitooligosaccharides and fluorescent N-acetylchitooligosaccharide analogs into rat liver lysosomes.
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Bouzidi, Younès, Bosco, Michaël, Gao, Haifei, Pradeau, Stéphanie, Matheron, Lucrèce, Chantret, Isabelle, Busca, Patricia, Fort, Sébastien, Gravier-Pelletier, Christine, and Moore, Stuart E H
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LYSOSOMES , *LIVER , *RATS , *HYDROLASES , *OLIGOSACCHARIDES , *ADENOSINE triphosphatase - Abstract
Free polymannose-type oligosaccharides (fOS) are processed by cytosolic enzymes to generate Man5GlcNAc which is transferred to lysosomes and degraded. Lysosomal fOS import was demonstrated in vitro but is poorly characterized in part due to lack of convenient substrates. As chitooligosaccharides (COS, oligomers β1,4-linked GlcNAc) block [3H]Man5GlcNAc transport into lysosomes, we asked if COS are themselves transported and if so, can they be chemically modified to generate fluorescent substrates. We show that COS are degraded by lysosomal hydrolases to generate GlcNAc, and robust ATP-dependent transport of [3H]COS2/4 di and tetrasaccharides into intact rat liver lysosomes was observed only after blocking lysosomal [3H]GlcNAc efflux with cytochalasin B. As oligosaccharides with unmodified reducing termini are the most efficient inhibitors of [3H]COS2/4 and [3H]Man5GlcNAc transport, the non-reducing GlcNAc residue of COS2-4 was de- N -acetylated using Sinorhizobium meliloti NodB, and the resulting amine substituted with rhodamine B (RB) to yield RB-COS2-4. The fluorescent compounds inhibit [3H]Man5GlcNAc transport and display temperature-sensitive, ATP-dependent transport into a sedimentable compartment that is ruptured with the lysosomotropic agent L-methyl methionine ester. Once in this compartment, RB-COS3 is converted to RB-COS2 further identifying it as the lysosomal compartment. RB-COS2/3 and [3H]Man5GlcNAc transports are blocked similarly by competing sugars, and are partially inhibited by the vacuolar ATPase inhibitor bafilomycin and high concentrations of the P-type ATPase inhibitor orthovanadate. These data show that Man5GlcNAc, COS2/4 and RB-COS2/3 are transported into lysosomes by the same or closely related mechanism and demonstrate the utility of COS modified at their non-reducing terminus to study lysosomal oligosaccharide transport. [ABSTRACT FROM AUTHOR]
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- 2024
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19. SlZIP11 mediates zinc accumulation and sugar storage in tomato fruits
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Jiaqi Sun, Manning Wang, Xinsheng Zhang, Xin Liu, and Jing Jiang
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Tomato ,SlZIP11 ,Fruit ,Zinc content ,SlSWEET7a ,Sugar transport ,Medicine ,Biology (General) ,QH301-705.5 - Abstract
Background Zinc (Zn) is a vital micronutrient essential for plant growth and development. Transporter proteins of the ZRT/IRT-like protein (ZIP) family play crucial roles in maintaining Zn homeostasis. Although the acquisition, translocation, and intracellular transport of Zn are well understood in plant roots and leaves, the genes that regulate these pathways in fruits remain largely unexplored. In this study, we aimed to investigate the function of SlZIP11 in regulating tomato fruit development. Methods We used Solanum lycopersicum L. ‘Micro-Tom’ SlZIP11 (Solanum lycopersicum) is highly expressed in tomato fruit, particularly in mature green (MG) stages. For obtaining results, we employed reverse transcription-quantitative polymerase chain reaction (RT-qPCR), yeast two-hybrid assay, bimolecular fluorescent complementation, subcellular localization assay, virus-induced gene silencing (VIGS), SlZIP11 overexpression, determination of Zn content, sugar extraction and content determination, and statistical analysis. Results RT-qPCR analysis showed elevated SlZIP11 expression in MG tomato fruits. SlZIP11 expression was inhibited and induced by Zn deficiency and toxicity treatments, respectively. Silencing SlZIP11 via the VIGS technology resulted in a significant increase in the Zn content of tomato fruits. In contrast, overexpression of SlZIP11 led to reduced Zn content in MG fruits. Moreover, both silencing and overexpression of SlZIP11 caused alterations in the fructose and glucose contents of tomato fruits. Additionally, SlSWEEET7a interacted with SlZIP11. The heterodimerization between SlSWEET7a and SlZIP11 affected subcellular targeting, thereby increasing the amount of intracellularly localized oligomeric complexes. Overall, this study elucidates the role of SlZIP11 in mediating Zn accumulation and sugar transport during tomato fruit ripening. These findings underscore the significance of SlZIP11 in regulating Zn levels and sugar content, providing insights into its potential implications for plant physiology and agricultural practices.
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- 2024
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20. Genome-wide identification and expression profiling of the SWEET family in Actinidia polygama (Sieb. & Zucc.) Maxim.
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Li Chen, Hui-Fang Song, Jia-Xin Liu, Xu-Xin Jiang, Jun Ai, Zhen-Xing Wang, and Yun-Peng Wang
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actinidia polygama ,sweet gene family ,sugar transport ,gene expression analysis ,Plant culture ,SB1-1110 - Abstract
Sugar was transported from photosynthetic source cells to sink cells, sugar efflux transporter protein (sugars will eventually be exported to transporters, SWEETs) play an important role in the process. Although SWEET family members had been identified in many plants, transcriptome or genomics analysis of Actinidia polygama SWEET genes remains uncharacterized. In this study, 14 SWEET genes of Actinidia polygama were identified by protein Blast. The structural characteristics of SWEET genes showed that the number of amino acids encoded by the gene family was between 233 and 304, the relative molecular weight was between 25,918.83 and 33,192.12, the isoelectric point was within the range of 6.96 to 9.71, 14 ApSWEET from Actinidia polygama and the known grape and Arabidopsis SWEETs were divided into four clades (I, II, III, and IV) according to the phylogenetic relationships. The gene structure analysis showed that most of ApSWEET genes have six exons and five introns except ApSWEET5 and ApSWEET14. All ApSWEET proteins also contained P-loop, MtN3-slv, and transmembrane domain. Expression patterns of 14 ApSWEET in different organs and at different fruit developmental stages were analyzed. ApSWEET1 and ApSWEET5 exhibited tissue-specific expression, whereas other genes were more ubiquitously expressed. ApSWEET1, ApSWEET10, and ApSWEET11 exhibited higher expression in fruit. The results of this study provide insights into the characteristics of the SWEET genes in Actinidia polygama and may serve as a basis for further functional studies of such genes.
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- 2024
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21. Common scab disease: structural basis of elicitor recognition in pathogenic Streptomyces species
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Frédéric Kerff, Samuel Jourdan, Isolde M. Francis, Benoit Deflandre, Silvia Ribeiro Monteiro, Nudzejma Stulanovic, Rosemary Loria, and Sébastien Rigali
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host-pathogen interaction ,plant pathogens ,ligand-protein interaction ,sugar transport ,carbohydrate metabolism ,elicitor binding ,Microbiology ,QR1-502 - Abstract
ABSTRACT In Streptomyces scabiei, the main causative agent of common scab disease of root and tuber crops, the interaction between the substrate-binding protein (SBP) CebE (CebEscab) and cellotriose released by the plant host (K D in the nanomolar range) is the first event for the onset of its pathogenic lifestyle. Here, we report the structure of CebEscab in complex with cellotriose at a resolution of 1.55 Å, adopting a general fold of the B subcluster of SBPs. The interaction between CebEscab and cellotriose involves multiple direct or water-mediated hydrogen bonds and hydrophobic interactions, with the glucose monomer at the non-reducing end occupying the most conserved part of the substrate-binding cleft. As main interactions between the two domains of CebE involve cellotriose itself, the closed conformational state of CebE is performed via an induced-fit ligand binding mechanism where cellotriose binding triggers the domain movement. Analysis of regulon predictions revealed that the signaling pathway from CebE-mediated cellotriose transport to the transcriptional activation of thaxtomin phytotoxin biosynthesis is conserved in Streptomyces spp. causing common scab, except for Streptomyces ipomoeae, which specifically colonizes sweet potatoes and responds to other and yet unknown virulence elicitors. Interestingly, strains belonging to the pathogenic species turgidiscabies and caniscabiei have a cellotriose-binding protein orthologous to the CebE protein of the saprophytic species Streptomyces reticuli with lower affinity for its substrate (K D in the micromolar range), suggesting higher cellotriose concentrations for perception of their host. Our work also provides the structural basis for the uptake of cellobiose and cellotriose by non-pathogenic cellulose-decomposing Streptomyces species. IMPORTANCE Common scab is a disease caused by a few Streptomyces species that affects important root and tuber crops including potato, beet, radish, and parsnip, resulting in major economic losses worldwide. In this work, we unveiled the molecular basis of host recognition by these pathogens by solving the structure of the sugar-binding protein CebE of Streptomyces scabiei in complex with cellotriose, the main elicitor of the pathogenic lifestyle of these bacteria. We further revealed that the signaling pathway from CebE-mediated transport of cellotriose is conserved in all pathogenic species except Streptomyces ipomoeae, which causes soft rot disease in sweet potatoes. Our work also provides the structural basis of the uptake of cellobiose and cellotriose in saprophytic Streptomyces species, the first step activating the expression of the enzymatic system degrading the most abundant polysaccharide on earth, cellulose.
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- 2023
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22. Coordination of carbon assimilation, allocation, and utilization for systemic improvement of cereal yield.
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Xiao-Gui Liang, Zhen Gao, Xiao-Xiang Fu, Xian-Min Chen, Si Shen, and Shun-Li Zhou
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CLIMATE extremes ,GREEN Revolution ,PHYSIOLOGY ,GRAIN storage ,CARBON ,GRAIN yields ,WHEAT - Abstract
The growth of yield outputs is dwindling after the first green revolution, which cannot meet the demand for the projected population increase by the mid- century, especially with the constant threat from extreme climates. Cereal yield requires carbon (C) assimilation in the source for subsequent allocation and utilization in the sink. However, whether the source or sink limits yield improvement, a crucial question for strategic orientation in future breeding and cultivation, is still under debate. To narrow the knowledge gap and capture the progress, we focus on maize, rice, and wheat by briefly reviewing recent advances in yield improvement by modulation of i) leaf photosynthesis; ii) primary C allocation, phloem loading, and unloading; iii) C utilization and grain storage; and iv) systemic sugar signals (e.g., trehalose 6-phosphate). We highlight strategies for optimizing C allocation and utilization to coordinate the source-sink relationships and promote yields. Finally, based on the understanding of these physiological mechanisms, we envisage a future scenery of "smart crop" consisting of flexible coordination of plant C economy, with the goal of yield improvement and resilience in the field population of cereals crops. [ABSTRACT FROM AUTHOR]
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- 2023
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23. Evidence of the predominance of passive symplastic phloem loading and sugar transport with leaf ageing in Camellia oleifera.
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Shiwen Yang, Kehao Liang, Yongjiang Sun, Jinshun Zhang, Yibo Cao, Jing Zhou, Aibin Wang, and Lingyun Zhang
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PHLOEM , *LEAF aging , *CAMELLIA oleifera , *RNA sequencing , *HIGH performance liquid chromatography - Abstract
Phloem loading and transport of sugar from leaves to sink tissues such as fruits are crucial for yield formation. Camellia oleifera is an evergreen horticultural crop with high value; however, its low production limits the development of the C. oleifera industry. In this study, using a combination of ultrastructural observation, fluorescence loss in photobleaching (FLIP) and inhibitor treatment, we revealed that C. oleifera leaves mainly adopt a symplastic loading route from mesophyll cells to the surrounding vascular bundle cells in minor veins. HPLC assays showed that sucrose is the main sugar transported and only a small amount of raffinose or stachyose was detected in petioles, supporting a passive symplastic loading route in C. oleifera leaves. Compared to leaves grown this year (LT), the carbohydrate synthesis capacity in leaves grown last year (LL) was decreased while LL retained more soluble sugar, suggesting a decrease in transport capacity with leaf ageing. TEM and tissue staining showed that a reduction in plasmodesmata density leads to a decline in the degree of cellular coupling and is responsible for the weakening transport capacity in older leaves. RNA-seq revealed several differentially expressed genes (DEGs) including CoPDCB1-1, CoSUT1 and CoSWEET12, which are likely involved in the regulation of phloem loading and sugar transport. An expression correlation network is constructed between PD-callose binding protein genes, sugar transporter genes and senescence-associated genes. Collectively, this study provides the evidence of the passive symplastic phloem loading pathway in C. oleifera leaves and constructs the correlation between sugar transport and leaf ageing. [ABSTRACT FROM AUTHOR]
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- 2023
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24. Camellia oleifera CoSWEET10 Is Crucial for Seed Development and Drought Resistance by Mediating Sugar Transport in Transgenic Arabidopsis.
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Ye, Zhihua, Du, Bingshuai, Zhou, Jing, Cao, Yibo, and Zhang, Lingyun
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SEED development ,CAMELLIA oleifera ,DROUGHT tolerance ,SUGAR ,SEED crops ,ARABIDOPSIS - Abstract
Sugar transport from the source leaf to the sink organ is critical for seed development and crop yield, as well as for responding to abiotic stress. SWEETs (sugar will eventually be exported transporters) mediate sugar efflux into the reproductive sink and are therefore considered key candidate proteins for sugar unloading during seed development. However, the specific mechanism underlying the sugar unloading to seeds in Camellia oleifera remains elusive. Here, we identified a SWEET gene named CoSWEET10, which belongs to Clade III and has high expression levels in the seeds of C. oleifera. CoSWEET10 is a plasma membrane-localized protein. The complementation assay of CoSWEET10 in SUSY7/ura3 and EBY.VW4000 yeast strains showed that CoSWEET10 has the ability to transport sucrose, glucose, and fructose. Through the C. oleifera seeds in vitro culture, we found that the expression of CoSWEET10 can be induced by hexose and sucrose, and especially glucose. By generating the restoration lines of CoSWEET10 in Arabidopsis atsweet10, we found that CoSWEET10 restored the seed defect phenotype of the mutant by regulating soluble sugar accumulation and increased plant drought tolerance. Collectively, our study demonstrates that CoSWEET10 plays a dual role in promoting seed development and enhancing plant drought resistance as a sucrose and hexose transporter. [ABSTRACT FROM AUTHOR]
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- 2023
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25. Sugar transporter ZmSWEET1b is responsible for assimilate allocation and salt stress response in maize.
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Wu, Yinting, Wang, Shanshan, Du, Wenhui, Ding, Yuhang, Li, Wei, Chen, Yudong, Zheng, Zhongtian, and Wang, Yijun
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Sugar efflux transporter SWEET family is involved in multiple biological processes, from nectar secretion, pollen fertility to seed filling. Although roles of SWEETs in abiotic stress adaption have been revealed mainly in reference organism Arabidopsis, cereal crops SWEETs responses to abiotic stimulation remain largely elusive. Here, we report the characterization of maize SWEET family member ZmSWEET1b, with emphasis on its response to salinity stress. ZmSWEET1b is a canonical sugar transporter, characteristic of seven transmembrane helices and plasma membrane localization. ZmSWEET1b and its rice ortholog OsSWEET1b in phylogenetic clade I underwent convergent selection during evolution. Two independent knockout lines were created by the CRISPR/Cas9 method to functionally characterized ZmSWEET1b. Sucrose and fructose contents are significantly decreased in ZmSWEET1b knockout lines. Mature leaves of ZmSWEET1b-edited lines exhibit chlorosis, reminiscent of senescence-like phenotype. Ears and seeds of ZmSWEET1b knockout lines are small. Upon salinity treatment, ZmSWEET1b-edited lines become more wilted. Transcriptional abundance of genes for Na+ efflux from roots to the rhizosphere, including ZmSOS1, ZmH+-ATPASE 2, and ZmH+-ATPASE 8, is decreased in salt-treated ZmSWEET1b knockout lines. These findings indicate that convergently selected sugar transporter ZmSWEET1b is important for maize plant development and responses to salt stress. The manipulation of ZmSWEET1b may represent a feasible way forward in the breeding of salinity tolerant ideotypes through the optimization of assimilate allocation. [ABSTRACT FROM AUTHOR]
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- 2023
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26. Inhibition of rice germination by ustiloxin A involves alteration in carbon metabolism and amino acid utilization.
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Xiaoxiang Fu, Yu Jin, Paul, Matthew J., Minxuan Yuan, Xingwei Liang, Ruqiang Cui, Yingjin Huang, Wenwen Peng, and Xiaogui Liang
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CARBON metabolism ,AMINO acid metabolism ,PHYSIOLOGY ,RICE ,GERMINATION ,SALICYLIC acid - Abstract
Ustiloxins are the main mycotoxin in rice false smut, a devastating disease caused by Ustilaginoidea virens. A typical phytotoxicity of ustiloxins is strong inhibition of seed germination, but the physiological mechanism is not clear. Here, we show that the inhibition of rice germination by ustiloxin A (UA) is dose-dependent. The sugar availability in UA-treated embryo was lower while the starch residue in endosperm was higher. The transcripts and metabolites responsive to typical UA treatment were investigated. The expression of several SWEET genes responsible for sugar transport in embryo was down-regulated by UA. Glycolysis and pentose phosphate processes in embryo were transcriptionally repressed. Most of the amino acids detected in endosperm and embryo were variously decreased. Ribosomal RNAs for growth were inhibited while the secondary metabolite salicylic acid was also decreased under UA. Hence, we propose that the inhibition of seed germination by UA involves the block of sugar transport from endosperm to embryo, leading to altered carbon metabolism and amino acid utilization in rice plants. Our analysis provides a framework for understanding of the molecular mechanisms of ustiloxins on rice growth and in pathogen infection. [ABSTRACT FROM AUTHOR]
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- 2023
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27. The role of SWEET4 proteins in the post-phloem sugar transport pathway of Setaria viridis sink tissues.
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Chen, Lily, Ganguly, Diep R, Shafik, Sarah H, Danila, Florence, Grof, Christopher P L, Sharwood, Robert E, and Furbank, Robert T
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SETARIA , *SUGAR , *XENOPUS laevis , *PROTEINS , *TISSUES , *SUCROSE , *SUGARS , *GLUCOSE transporters - Abstract
In the developing seeds of all higher plants, filial cells are symplastically isolated from the maternal tissue supplying photosynthate to the reproductive structure. Photoassimilates must be transported apoplastically, crossing several membrane barriers, a process facilitated by sugar transporters. Sugars Will Eventually be Exported Transporters (SWEETs) have been proposed to play a crucial role in apoplastic sugar transport during phloem unloading and the post-phloem pathway in sink tissues. Evidence for this is presented here for developing seeds of the C4 model grass Setaria viridis. Using immunolocalization, SvSWEET4 was detected in various maternal and filial tissues within the seed along the sugar transport pathway, in the vascular parenchyma of the pedicel, and in the xylem parenchyma of the stem. Expression of SvSWEET4a in Xenopus laevis oocytes indicated that it functions as a high-capacity glucose and sucrose transporter. Carbohydrate and transcriptional profiling of Setaria seed heads showed that there were some developmental shifts in hexose and sucrose content and consistent expression of SvSWEET4 homologues. Collectively, these results provide evidence for the involvement of SWEETs in the apoplastic transport pathway of sink tissues and allow a pathway for post-phloem sugar transport into the seed to be proposed. [ABSTRACT FROM AUTHOR]
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- 2023
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28. Protein-Protein Interactions in the Cytoplasmic Membrane of Escherichia coli: Influence of the Overexpression of Diverse Transporter-Encoding Genes on the Activities of PTS Sugar Uptake Systems
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Aboulwafa, Mohammad, Zhang, Zhongge, and Saier, Milton H
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Biochemistry and Cell Biology ,Biological Sciences ,Biological Transport ,Cell Membrane ,Deoxyglucose ,Escherichia coli ,Fructose ,Gene Expression Regulation ,Bacterial ,Glucose ,Kinetics ,Membrane Transport Proteins ,Phosphotransferases ,Protein Interaction Domains and Motifs ,Sugars ,Sugar transport ,Sugar phosphorylation ,Phosphotransferase system ,Integral membrane protein:protein interactions ,Allosteric regulation - Abstract
The prokaryotic phosphoenolpyruvate (PEP):sugar phosphotransferase system (PTS) concomitantly transports and phosphorylates its substrate sugars. In a recent publication, we provided evidence that protein-protein interactions of the fructose-specific integral membrane transporter (FruAB) with other PTS sugar group translocators regulate the activities of the latter systems in vivo and sometimes in vitro. In this communication, we examine the consequences of the overexpression of several different transport systems on the activities of selected PTS and non-PTS permeases. We report that high levels of these transport systems enhance the in vivo activities of several other systems in a fairly specific fashion. Thus, (1) overexpression of ptsG (glucose porter) selectively enhanced mannitol, N-acetylglucosamine, and 2-deoxyglucose (2DG) uptake rates; (2) overexpression of mtlA (mannitol porter) promoted methyl α-glucoside (αMG) and 2DG uptake; (3) manYZ (but not manY alone) (mannose porter) overexpression enhanced αMG uptake; (4) galP (galactose porter) overexpression enhanced mannitol and αMG uptake; and (5) ansP (asparagine porter) overexpression preferentially enhanced αMG and 2DG uptake, all presumably as a result of direct protein-protein interactions. Thus, it appears that high level production of several integral membrane permeases enhances sugar uptake rates, with the PtsG and ManXYZ systems being most consistently stimulated, but the MtlA and NagE systems being more selectively stimulated and to a lesser extent. Neither enhanced expression nor in vitro PEP-dependent phosphorylation activities of the target PTS systems were appreciably affected. The results are consistent with the suggestion that integral membrane transport proteins form an interacting network in vivo with physiological consequences, dependent on specific transporters and their concentrations in the membrane.
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- 2020
29. A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
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Cooper, Elizabeth A, Brenton, Zachary W, Flinn, Barry S, Jenkins, Jerry, Shu, Shengqiang, Flowers, Dave, Luo, Feng, Wang, Yunsheng, Xia, Penny, Barry, Kerrie, Daum, Chris, Lipzen, Anna, Yoshinaga, Yuko, Schmutz, Jeremy, Saski, Christopher, Vermerris, Wilfred, and Kresovich, Stephen
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Biological Sciences ,Genetics ,2.1 Biological and endogenous factors ,1.1 Normal biological development and functioning ,DNA ,Plant ,Gene Expression Profiling ,Genome ,Plant ,Genomics ,Genotype ,Reference Standards ,Sequence Homology ,Nucleic Acid ,Sorghum ,Sugars ,Sugar metabolism ,Sugar transport ,Gene expression ,Information and Computing Sciences ,Medical and Health Sciences ,Bioinformatics ,Biological sciences ,Biomedical and clinical sciences - Abstract
BackgroundThe process of crop domestication often consists of two stages: initial domestication, where the wild species is first cultivated by humans, followed by diversification, when the domesticated species are subsequently adapted to more environments and specialized uses. Selective pressure to increase sugar accumulation in certain varieties of the cereal crop Sorghum bicolor is an excellent example of the latter; this has resulted in pronounced phenotypic divergence between sweet and grain-type sorghums, but the genetic mechanisms underlying these differences remain poorly understood.ResultsHere we present a new reference genome based on an archetypal sweet sorghum line and compare it to the current grain sorghum reference, revealing a high rate of nonsynonymous and potential loss of function mutations, but few changes in gene content or overall genome structure. We also use comparative transcriptomics to highlight changes in gene expression correlated with high stalk sugar content and show that changes in the activity and possibly localization of transporters, along with the timing of sugar metabolism play a critical role in the sweet phenotype.ConclusionsThe high level of genomic similarity between sweet and grain sorghum reflects their historical relatedness, rather than their current phenotypic differences, but we find key changes in signaling molecules and transcriptional regulators that represent new candidates for understanding and improving sugar metabolism in this important crop.
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- 2019
30. Integrated Metabolomic and Transcriptomic Analyses Reveals Sugar Transport and Starch Accumulation in Two Specific Germplasms of Manihot esculenta Crantz.
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Cai, Jie, Xue, Jingjing, Zhu, Wenli, Luo, Xiuqin, Lu, Xiaohua, Xue, Maofu, Wei, Zhuowen, Cai, Yuqi, Ou, Wenjun, Li, Kaimian, An, Feifei, and Chen, Songbi
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CASSAVA , *TUBER crops , *SUGAR analysis , *METABOLOMICS , *SUCROSE , *STARCH metabolism , *STARCH - Abstract
As a starchy and edible tropical plant, cassava (Manihot esculenta Crantz) has been widely used as an industrial raw material and a dietary source. However, the metabolomic and genetic differences in specific germplasms of cassava storage root were unclear. In this study, two specific germplasms, M. esculenta Crantz cv. sugar cassava GPMS0991L and M. esculenta Crantz cv. pink cassava BRA117315, were used as research materials. Results showed that sugar cassava GPMS0991L was rich in glucose and fructose, whereas pink cassava BRA117315 was rich in starch and sucrose. Metabolomic and transcriptomic analysis indicated that sucrose and starch metabolism had significantly changing metabolites enrichment and the highest degree of differential expression genes, respectively. Sugar transport in storage roots may contribute to the activities of sugar, which will eventually be exported to transporters (SWEETs), such as (MeSWEET1a, MeSWEET2b, MeSWEET4, MeSWEET5, MeSWEET10b, and MeSWEET17c), which transport hexose to plant cells. The expression level of genes involved in starch biosynthesis and metabolism were altered, which may result in starch accumulation. These results provide a theoretical basis for sugar transport and starch accumulation and may be useful in improving the quality of tuberous crops and increasing yield. [ABSTRACT FROM AUTHOR]
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- 2023
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31. Genome-Wide Identification of the Rose SWEET Gene Family and Their Different Expression Profiles in Cold Response between Two Rose Species.
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Song, Xiangshang, Kou, Yaping, Duan, Mingao, Feng, Bo, Yu, Xiaoyun, Jia, Ruidong, Zhao, Xin, Ge, Hong, and Yang, Shuhua
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GENE expression ,GENE families ,SPECIES ,CHROMOSOME duplication ,ABIOTIC stress ,CIS-regulatory elements (Genetics) ,PHYSIOLOGICAL effects of cold temperatures - Abstract
Sugars Will Eventually be Exported Transporter (SWEET) gene family plays indispensable roles in plant physiological activities, development processes, and responses to biotic and abiotic stresses, but no information is known for roses. In this study, a total of 25 RcSWEET genes were identified in Rosa chinensis 'Old Blush' by genome-wide analysis and clustered into four subgroups based on their phylogenetic relationships. The genomic features, including gene structures, conserved motifs, and gene duplication among the chromosomes of RcSWEET genes, were characterized. Seventeen types of cis-acting elements among the RcSWEET genes were predicted to exhibit their potential regulatory roles during biotic and abiotic stress and hormone responses. Tissue-specific and cold-response expression profiles based on transcriptome data showed that SWEETs play widely varying roles in development and stress tolerance in two rose species. Moreover, the different expression patterns of cold-response SWEET genes were verified by qRT-PCR between the moderately cold-resistant species R. chinensis 'Old Blush' and the extremely cold-resistant species R. beggeriana. Especially, SWEET2a and SWEET10c exhibited species differences after cold treatment and were sharply upregulated in the leaves of R. beggeriana but not R. chinensis 'Old Blush', indicating that these two genes may be the crucial candidates that participate in cold tolerance in R. beggeriana. Our results provide the foundation for function analysis of the SWEET gene family in roses, and will contribute to the breeding of cold-tolerant varieties of roses. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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32. Role of Alternative Elicitor Transporters in the Onset of Plant Host Colonization by Streptomyces scabiei 87-22.
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Francis, Isolde M., Bergin, Danica, Deflandre, Benoit, Gupta, Sagar, Salazar, Joren J. C., Villagrana, Richard, Stulanovic, Nudzejma, Ribeiro Monteiro, Silvia, Kerff, Frédéric, Loria, Rosemary, and Rigali, Sébastien
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PLANT colonization , *HOST plants , *COLONIZATION (Ecology) , *STREPTOMYCES , *TUBER crops , *POTATOES , *OLIGOSACCHARIDES , *TUBERS - Abstract
Simple Summary: The bacterium Streptomyces scabiei is the main causative agent of common scab disease on economically important root and tuber crops. Our work investigated if and how this pathogen uses multiple sugar transport systems to sense the presence of a living plant host through perception and import of cello-oligosaccharides, the elicitors that trigger the onset of the pathogenic lifestyle of S. scabiei. Plant colonization by Streptomyces scabiei, the main cause of common scab disease on root and tuber crops, is triggered by cello-oligosaccharides, cellotriose being the most efficient elicitor. The import of cello-oligosaccharides via the ATP-binding cassette (ABC) transporter CebEFG-MsiK induces the production of thaxtomin phytotoxins, the central virulence determinants of this species, as well as many other metabolites that compose the 'virulome' of S. scabiei. Homology searches revealed paralogues of the CebEFG proteins, encoded by the cebEFG2 cluster, while another ABC-type transporter, PitEFG, is encoded on the pathogenicity island (PAI). We investigated the gene expression of these candidate alternative elicitor importers in S. scabiei 87-22 upon cello-oligosaccharide supply by transcriptomic analysis, which revealed that cebEFG2 expression is highly activated by both cellobiose and cellotriose, while pitEFG expression was barely induced. Accordingly, deletion of pitE had no impact on virulence and thaxtomin production under the conditions tested, while the deletion of cebEFG2 reduced virulence and thaxtomin production, though not as strong as the mutants of the main cello-oligosaccharide transporter cebEFG1. Our results thus suggest that both ceb clusters participate, at different levels, in importing the virulence elicitors, while PitEFG plays no role in this process under the conditions tested. Interestingly, under more complex culture conditions, the addition of cellobiose restored thaxtomin production when both ceb clusters were disabled, suggesting the existence of an additional mechanism that is involved in sensing or importing the elicitor of the onset of the pathogenic lifestyle of S. scabiei. [ABSTRACT FROM AUTHOR]
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- 2023
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33. Upregulation of LmHxt1 gene is associated with reduced virulence of Leptosphaeria maculans on Brassica napus
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Stehlík, Daniel, Trdá, Lucie, Leontovyčová, Hana, Kalachova, Tetiana, and Burketová, Lenka
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- 2024
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34. Functional characterization and analysis of transcriptional regulation of sugar transporter SWEET13c in sugarcane Saccharum spontaneum
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Xiuting Hua, Qiaochu Shen, Yihan Li, Dong Zhou, Zhe Zhang, Sehrish Akbar, Zhengchao Wang, and Jisen Zhang
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Saccharum spontaneum ,Sugar transport ,SWEET13c ,Transcription factor ,Botany ,QK1-989 - Abstract
Abstract Background Sugarcane is an important crop for sugar production worldwide. The Sugars Will Eventually be Exported Transporters (SWEETs) are a group of sugar transporters recently identified in sugarcane. In Saccharum spontaneum, SsSWEET13c played a role in the sucrose transportation from the source to the sink tissues, which was found to be mainly active in the mature leaf. However, the function and regulation of SWEETs in sugarcane remain elusive despite extensive studies performed on sugar metabolism. Results In this study, we showed that SsSWEET13c is a member of SWEET gene family in S. spontaneum, constituting highest circadian rhythm-dependent expression. It is a functional gene that facilitates plant root elongation and increase fresh weight of Arabidopsis thaliana, when overexpressed. Furthermore, yeast one-hybrid assays indicate that 20 potential transcription factors (TFs) could bind to the SsSWEET13c promoter in S. spontaneum. We combined transcriptome data from developmental gradient leaf with distinct times during circadian cycles and stems/leaves at different growth stages. We have uncovered that 14 out of 20 TFs exhibited positive/negative gene expression patterns relative to SsSWEET13c. In the source tissues, SsSWEET13c was mainly positively regulated by SsbHLH34, SsTFIIIA-a, SsMYR2, SsRAP2.4 and SsbHLH035, while negatively regulated by SsABS5, SsTFIIIA-b and SsERF4. During the circadian rhythm, it was noticed that SsSWEET13c was more active in the morning than in the afternoon. It was likely due to the high level of sugar accumulation at night, which was negatively regulated by SsbZIP44, and positively regulated by SsbHLH34. Furthermore, in the sink tissues, SsSWEET13c was also active for sugar accumulation, which was positively regulated by SsbZIP44, SsTFIIIA-b, SsbHLH34 and SsTFIIIA-a, and negatively regulated by SsERF4, SsHB36, SsDEL1 and SsABS5. Our results were further supported by one-to-one yeast hybridization assay which verified that 12 potential TFs could bind to the promoter of SsSWEET13c. Conclusions A module of the regulatory network was proposed for the SsSWEET13c in the developmental gradient of leaf and circadian rhythm in S. spontaneum. These results provide a novel understanding of the function and regulation of SWEET13c during the sugar transport and biomass production in S. spontaneum.
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- 2022
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35. Regulation of sucrose metabolism, sugar transport and pentose phosphate pathway by PacC in apple fruit colonized by Penicillium expansum.
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Zhu, Yatong, Zong, Yuanyuan, Wang, Xuexue, Gong, Di, Zhang, Xuemei, Zhang, Feng, Prusky, Dov, and Bi, Yang
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- *
NICOTINAMIDE adenine dinucleotide phosphate , *PENTOSE phosphate pathway , *TRANSCRIPTION factors , *METABOLIC regulation , *ENZYME metabolism , *APPLE blue mold - Abstract
A critical transcription factor, PacC, modulates the expression of fungal pH signaling. Although PacC-mediated environmental pH has been reported to regulate the growth and pathogenicity of postharvest pathogens, the involvement of PacC in sucrose metabolism, sugar transport, and the pentose phosphate pathway (PPP) in different zones of decayed fruit remains unclear. Our work showed that the inoculation with a PePacC deletion strain of Penicillium expansum (Δ PePacC) accelerated sucrose catabolism and glucose and fructose accumulation in different zones of apple fruit. This was attributed to an increase in sucrose metabolism enzyme activities and up-regulation of the sugar transporter protein-related gene expression. Moreover, Δ PePacC inoculation increased the PPP-related enzyme activities and the levels of nicotinamide adenine dinucleotide phosphate (NADPH) and NADP+. In conclusion, PacC modulates sucrose metabolism, sugar transport, and the PPP in apple fruit by mediating dynamic changes in environmental pH, thereby enhancing fruit disease resistance. • PePacC modulated the sucrose catabolism in fruit colonized by P. expansum. • PePacC regulated the sugar transport in fruit colonized by P. expansum. • PePacC mediated PPP-induced resistance response in fruit colonized by P. expansum. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
36. Systemic control of plant regeneration and wound repair.
- Author
-
Omary, Moutasem, Matosevich, Rotem, and Efroni, Idan
- Subjects
- *
REGENERATION (Botany) , *REGENERATION (Biology) , *AUXIN - Abstract
Summary: Plants have a broad capacity to regenerate damaged organs. The study of wounding in multiple developmental systems has uncovered many of the molecular properties underlying plants' competence for regeneration at the local cellular level. However, in nature, wounding is rarely localized to one place, and plants need to coordinate regeneration responses at multiple tissues with environmental conditions and their physiological state. Here, we review the evidence for systemic signals that regulate regeneration on a plant‐wide level. We focus on the role of auxin and sugars as short‑ and long‐range signals in natural wounding contexts and discuss the varied origin of these signals in different regeneration scenarios. Together, this evidence calls for a broader, system‐wide view of plant regeneration competence. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
37. Late-Stage Functionalization through Click Chemistry Provides GLUT5-Targeting Glycoconjugate as a Potential PET Imaging Probe.
- Author
-
Oronova, Adelina and Tanasova, Marina
- Subjects
- *
POSITRON emission tomography , *METABOLIC disorders , *CELL lines , *FLUOROPHORES - Abstract
The targeting of facilitative sugar transporters (GLUTs) has been utilized in the development of tools for diagnostics and therapy. The interest in this area is promoted by the phenomenon of alterations in cellular metabolic processes that are linked to multitudes of metabolic disorders and diseases. However, nonspecific targeting (e.g., glucose-transporting GLUTs) leads to a lack of disease detection efficiency. Among GLUTs, GLUT5 stands out as a prominent target for developing specific molecular tools due to its association with metabolic diseases, including cancer. This work reports a non-radiolabeled fluoride (19F) coumarin-based glycoconjugate of 2,5-anhydro-D-mannitol as a potential PET imaging probe that targets the GLUT5 transporter. Inherent fluorescent properties of the coumarin fluorophore allowed us to establish the probe's uptake efficiency and GLUT5-specificity in a GLUT5-positive breast cell line using fluorescence detection techniques. The click chemistry approach employed in the design of the probe enables late-stage functionalization, an essential requirement for obtaining the radiolabeled analog of the probe for future in vivo cancer imaging applications. The high affinity of the probe to GLUT5 allowed for the effective uptake in nutrition-rich media. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
38. MeSWEET15a/b genes play a role in the resistance of cassava (Manihot esculenta Crantz) to water and salt stress by modulating sugar distribution.
- Author
-
Fan, Xian-Wei, Sun, Jin-Liang, Cai, Zheng, Zhang, Fan, Li, You-Zhi, and Palta, Jairo A.
- Subjects
- *
CASSAVA , *SALINE waters , *ATP-binding cassette transporters , *SUGARS , *LIPID peroxidation (Biology) , *SUGAR , *SAP (Plant) - Abstract
The sugar transporter SWEET plays a role in plant growth, carbon allocation, and abiotic stress resistance. We examined the function of SWEET in cassava (Manihot esculenta Crantz) under water and salt stress. Bioinformatics, subcellular localization, yeast deficient complementation, and virus-induced gene silencing (VIGS) were used to examine the function of SWEET in cassava. Twenty-eight MeSWEETs genes were found based on the conserved domain MtN3/saliva of SWEET transporters, two MeSWEET15a/b of them were identified by phylogenetic analysis, which were located on the cell membrane. They transfer sucrose, fructose, glucose, and mannitol from culture media to yeast cells, predominately transferring sucrose via bleeding fluid saps in plant. Leaf sucrose content was increased in MeSWEET15a/b -silenced cassava plants, resulting in changes in carbon distribution, with an increase in starch accumulation in the leaves and a decrease in starch accumulation in the roots. The silencing of MeSWEET15a/b genes led to tolerance to water and salt stress, consistent with a high accumulation of osmolytes, and low lipid membrane peroxidation. Changes in sugar distribution increased the expression of MeTOR and MeE2Fa in pTRV2- MeSWEET15a and pTRV2-MeSWEET15b cassava leaves. MeSWEET15a / b acts as pivotal modulators of sugar distribution and tolerance to water and high salt stress in cassava. • MeSWEET15a/b was located on the cell membrane. • MeSWEET15a/b transfer multiple sugars in yeast and mainly transfer sucrose in plant. • The silence of MeSWEET15a/b modulated the balance of sugar distribution in cassava. • The silence of MeSWEET15a/b increased the tolerance of cassava to abiotic stresses. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
39. Genome-wide analysis of the SWEET genes in Taraxacum kok-saghyz Rodin: An insight into two latex-abundant isoforms.
- Author
-
Xu, Menghao, Zhang, Yi, Yang, Xue, Xing, Jianfeng, Qi, Jiyan, Zhang, Shengmin, Zhang, Yuhao, Ye, De, and Tang, Chaorong
- Subjects
- *
PLANT protoplasts , *GENE expression , *GENES , *CELL membranes , *RUBBER plantations , *CONFECTIONERY , *TRANSIENT analysis - Abstract
Taraxacum kok-saghyz Rodin (Tk) is a promising alternative rubber-producing grass. However, low biomass and rubber-producing capability limit its commercial application. As a carbon source transporter in plants, sugar will eventually be exported transporters (SWEETs) have been reported to play pivotal roles in diverse physiological events in the context of carbon assimilate transport and utilization. Theoretically, SWEETs would participate in Tk growth, development and response to environmental cues with relation to the accumulation of rubber and biomass, both of which rely on the input of carbon assimilates. Here, we identified 22 TkSWEET s through homology searching of the Tk genomes and bioinformatics analyses. RNA-seq and qRT-PCR analysis revealed these TkSWEETs to have overlapping yet distinct tissue expression patterns. Two TkSWEET isofroms, TkSWEET1 and TkSWEET12 expressed substantially in the latex, the cytoplasm of rubber-producing laticifers as well as the rubber source. As revealed by the transient expression analysis using Tk mesophyll protoplasts, both TkSWEET1 and TkSWEET12 were located in the plasma membrane. Heterologous expressions of the two TkSWEETs in a yeast mutant revealed that only TkSWEET1 exhibited apparent sugar transport activities, with a preference for monosaccharides. Interestingly, TkSWEET12 , the latex-predominant TkSWEET isoform, seemed to have evolved from a tandem duplication event that results in a cluster of six TkSWEET genes with the TkSWEET12 therein, suggesting its specialized roles in the laticifers. • This study is the first comprehensive analysis of SWEET s in Taraxacum kok-saghyz (Tk). • Of the two latex-abundant isoforms, TkSWEET1 and TkSWEET12 , only TkSWEET1 exhibited sugar transport capability. • Several pieces of evidence point to a special role of TkSWEET12 in the rubber-producing laticifers. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
40. Transcriptional regulation of the raffinose family oligosaccharides pathway in Sorghum bicolor reveals potential roles in leaf sucrose transport and stem sucrose accumulation.
- Author
-
McKinley, Brian A., Thakran, Manish, Zemelis-Durfee, Starla, Xinyi Huang, Brandizzi, Federica, Rooney, William L., Mansfield, Shawn D., and Mullet, John E.
- Subjects
RAFFINOSE ,SORGHUM ,GENETIC transcription regulation ,OLIGOSACCHARIDES ,SORGO ,SUCROSE ,DROUGHT tolerance - Abstract
Bioenergy sorghum hybrids are being developed with enhanced drought tolerance and high levels of stem sugars. Raffinose family oligosaccharides (RFOs) contribute to plant environmental stress tolerance, sugar storage, transport, and signaling. To better understand the role of RFOs in sorghum, genes involved in myo-inositol and RFO metabolism were identified and relative transcript abundance analyzed during development. Genes involved in RFO biosynthesis (SbMIPS1, SbInsPase, SbGolS1, SbRS) were more highly expressed in leaves compared to stems and roots, with peak expression early in the morning in leaves. SbGolS, SbRS, SbAGA1 and SbAGA2 were also expressed at high levels in the leaf collar and leaf sheath. In leaf blades, genes involved in myo-inositol biosynthesis (SbMIPS1, SbInsPase) were expressed in bundle sheath cells, whereas genes involved in galactinol and raffinose synthesis (SbGolS1, SbRS) were expressed in mesophyll cells. Furthermore, SbAGA1 and SbAGA2, genes that encode neutral-alkaline alpha-galactosidases that hydrolyze raffinose, were differentially expressed in minor vein bundle sheath cells and major vein and mid-rib vascular and xylem parenchyma. This suggests that raffinose synthesized from sucrose and galactinol in mesophyll cells diffuses into vascular bundles where hydrolysis releases sucrose for long distance phloem transport. Increased expression (>20-fold) of SbAGA1 and SbAGA2 in stem storage pith parenchyma of sweet sorghum between floral initiation and grain maturity, and higher expression in sweet sorghum compared to grain sorghum, indicates these genes may play a key role in non-structural carbohydrate accumulation in stems. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
41. Effects of Exogenous α-Naphthaleneacetic Acid and 24-Epibrassinolide on Fruit Size and Assimilate Metabolism-Related Sugars and Enzyme Activities in Giant Pumpkin.
- Author
-
Chen, Chen, Wu, Xuan-Min, Pan, Liu, Yang, Ya-Ting, Dai, Hai-Bo, Hua, Bing, Miao, Min-Min, and Zhang, Zhi-Ping
- Subjects
- *
FRUIT , *SUGARS , *PHOTOSYNTHETIC rates , *SUGAR , *RAFFINOSE , *PUMPKINS - Abstract
Size is the most important quality attribute of giant pumpkin fruit. Different concentrations and application frequencies of α-naphthaleneacetic acid (NAA) and 24-epibrassinolide (EBR) were sprayed on the leaves and fruits of giant pumpkin at different growth stages to determine their effects and the mechanism responsible for fruit size increase. NAA+EBR application improved source strength, and further analysis indicated that NAA+EBR markedly boosted net photosynthetic rate (Pn), stomatal conductance (Gs), transpiration rate (Tr) and the expression level and activity of galactitol synthetase (GolS), raffinose synthetase (RS), and stachyose synthetase (STS), resulting in an increase in the synthesis of photoassimilate, especially stachyose. Concomitantly, NAA+EBR spray increased stachyose and sucrose contents throughout pumpkin fruit growth and the concentrations of glucose and fructose at 0 and 20 days post-anthesis (DPA) in peduncle phloem sap, implying that such treatment improved the efficiency of assimilate transport from the peduncle to the fruit. Furthermore, it improved the expression and activity of alkaline α-galactosidase (AGA), facilitating assimilate unloading, providing carbon skeletons and energy for fruit growth, and increasing fruit weight by more than 44.1%. Therefore, exogenous NAA and EBR increased source capacity, transportation efficiency, and sink strength, overall promoting the synthesis and distribution of photoassimilate, ultimately increasing fruit size. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
42. Two critical membranes: how does the chloroplast envelope affect plant acclimation properties?
- Author
-
John A, Keller I, Ebel KW, and Neuhaus HE
- Subjects
- Intracellular Membranes metabolism, Intracellular Membranes physiology, Plant Proteins metabolism, Plant Physiological Phenomena, Chloroplasts metabolism, Chloroplasts physiology, Acclimatization
- Abstract
Chloroplasts play a pivotal role in the metabolism of leaf mesophyll cells, functioning as a cellular hub that orchestrates molecular reactions in response to environmental stimuli. These organelles contain complex protein machinery for energy conversion and are indispensable for essential metabolic pathways. Proteins located within the chloroplast envelope membranes facilitate bidirectional communication with the cell and connect essential pathways, thereby influencing acclimation processes to challenging environmental conditions such as temperature fluctuations and light intensity changes. Despite their importance, a comprehensive overview of the impact of envelope-located proteins during acclimation to environmental changes is lacking. Understanding the role of these proteins in acclimation processes could provide insights into enhancing stress tolerance under increasingly challenging environments. This review highlights the significance of envelope-located proteins in plant acclimation., (© The Author(s) 2024. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For commercial re-use, please contact reprints@oup.com for reprints and translation rights for reprints. All other permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact journals.permissions@oup.com.)
- Published
- 2025
- Full Text
- View/download PDF
43. Sugar transporters of the SWEET family and their role in arbuscular mycorrhiza
- Author
-
A. A. Kryukov, A. O. Gorbunova, T. R. Kudriashova, O. I. Yakhin, A. A. Lubyanov, U. M. Malikov, M. F. Shishova, A. P. Kozhemyakov, and A. P. Yurkov
- Subjects
arbuscular mycorrhiza ,sweet ,sugar transport ,sucrose ,glucose ,sugar transporter genes ,Genetics ,QH426-470 - Abstract
Plant sugar transporters play an essential role in the organism’s productivity by carrying out carbohydrate transportation from source cells in the leaves to sink cells in the cortex. In addition, they aid in the regulation of a substantial part of the exchange of nutrients with microorganisms in the rhizosphere (bacteria and fungi), an activity essential to the formation of symbiotic relationships. This review pays special attention to carbohydrate nutrition during the development of arbuscular mycorrhiza (AM), a symbiosis of plants with fungi from the Glomeromycotina subdivision. This relationship results in the host plant receiving micronutrients from the mycosymbiont, mainly phosphorus, and the fungus receiving carbon assimilation products in return. While the efficient nutrient transport pathways in AM symbiosis are yet to be discovered, SWEET sugar transporters are one of the three key families of plant carbohydrate transporters. Specific AM symbiosis transporters can be identified among the SWEET proteins. The survey provides data on the study history, structure and localization, phylogeny and functions of the SWEET proteins. A high variability of both the SWEET proteins themselves and their functions is noted along with the fact that the same proteins may perform different functions in different plants. A special role is given to the SWEET transporters in AM development. SWEET transporters can also play a key role in abiotic stress tolerance, thus allowing plants to adapt to adverse environmental conditions. The development of knowledge about symbiotic systems will contribute to the creation of microbial preparations for use in agriculture in the Russian Federation.
- Published
- 2021
- Full Text
- View/download PDF
44. Transcriptional regulation of the raffinose family oligosaccharides pathway in Sorghum bicolor reveals potential roles in leaf sucrose transport and stem sucrose accumulation
- Author
-
Brian A. McKinley, Manish Thakran, Starla Zemelis-Durfee, Xinyi Huang, Federica Brandizzi, William L. Rooney, Shawn D. Mansfield, and John E. Mullet
- Subjects
raffinose ,sugar transport ,bioenergy sorghum ,inositol ,phloem loading ,Plant culture ,SB1-1110 - Abstract
Bioenergy sorghum hybrids are being developed with enhanced drought tolerance and high levels of stem sugars. Raffinose family oligosaccharides (RFOs) contribute to plant environmental stress tolerance, sugar storage, transport, and signaling. To better understand the role of RFOs in sorghum, genes involved in myo-inositol and RFO metabolism were identified and relative transcript abundance analyzed during development. Genes involved in RFO biosynthesis (SbMIPS1, SbInsPase, SbGolS1, SbRS) were more highly expressed in leaves compared to stems and roots, with peak expression early in the morning in leaves. SbGolS, SbRS, SbAGA1 and SbAGA2 were also expressed at high levels in the leaf collar and leaf sheath. In leaf blades, genes involved in myo-inositol biosynthesis (SbMIPS1, SbInsPase) were expressed in bundle sheath cells, whereas genes involved in galactinol and raffinose synthesis (SbGolS1, SbRS) were expressed in mesophyll cells. Furthermore, SbAGA1 and SbAGA2, genes that encode neutral-alkaline alpha-galactosidases that hydrolyze raffinose, were differentially expressed in minor vein bundle sheath cells and major vein and mid-rib vascular and xylem parenchyma. This suggests that raffinose synthesized from sucrose and galactinol in mesophyll cells diffuses into vascular bundles where hydrolysis releases sucrose for long distance phloem transport. Increased expression (>20-fold) of SbAGA1 and SbAGA2 in stem storage pith parenchyma of sweet sorghum between floral initiation and grain maturity, and higher expression in sweet sorghum compared to grain sorghum, indicates these genes may play a key role in non-structural carbohydrate accumulation in stems.
- Published
- 2022
- Full Text
- View/download PDF
45. Phylogenetic analysis and structural prediction reveal the potential functional diversity between green algae SWEET transporters.
- Author
-
Fleet, Jack, Ansari, Mujtaba, and Pittman, Jon K.
- Subjects
AMINO acid residues ,GREEN algae ,AMINO acid analysis ,PLANT proteins ,PROTEIN structure ,AMINO acid sequence - Abstract
Sugar-Will-Eventually-be-Exported-Transporters (SWEETs) are an important family of sugar transporters that appear to be ubiquitous in all organisms. Recent research has determined the structure of SWEETs in higher plants, identified specific residues required for monosaccharide or disaccharide transport, and begun to understand the specific functions of individual plant SWEET proteins. However, in green algae (Chlorophyta) these transporters are poorly characterised. This study identified SWEET proteins from across representative Chlorophyta with the aim to characterise their phylogenetic relationships and perform protein structure modelling in order to inform functional prediction. The algal genomes analysed encoded between one and six SWEET proteins, which is much less than a typical higher plant. Phylogenetic analysis identified distinct clusters of over 70 SWEET protein sequences, taken from almost 30 algal genomes. These clusters remain separate from representative higher or non-vascular plant SWEETs, but are close to fungi SWEETs. Subcellular localisation predictions and analysis of conserved amino acid residues revealed variation between SWEET proteins of different clusters, suggesting different functionality. These findings also showed conservation of key residues at the substrate-binding site, indicating a similar mechanism of substrate selectivity and transport to previously characterised higher plant monosaccharide-transporting SWEET proteins. Future work is now required to confirm the predicted sugar transport specificity and determine the functional role of these algal SWEET proteins. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
46. GmSWEET29 and Paralog GmSWEET34 Are Differentially Expressed between Soybeans Grown in Eastern and Western Canada.
- Author
-
Hooker, Julia C., Nissan, Nour, Luckert, Doris, Zapata, Gerardo, Hou, Anfu, Mohr, Ramona M., Glenn, Aaron J., Barlow, Brent, Daba, Ketema A., Warkentin, Thomas D., Lefebvre, François, Golshani, Ashkan, Cober, Elroy R., and Samanfar, Bahram
- Abstract
Over the past two decades soybeans grown in western Canada have persistently had lower seed protein than those grown in eastern Canada. To understand the discrepancy in seed protein content between eastern- and western-grown soybeans, RNA-seq and differential expression analysis have been investigated. Ten soybean genotypes, ranging from low to high in seed protein content, were grown in four locations across eastern (Ottawa) and western (Morden, Brandon, and Saskatoon) Canada. Differential expression analysis revealed 34 differentially expressed genes encoding Glycine max Sugars Will Eventually be Exported Transporters (GmSWEETs), including paralogs GmSWEET29 and GmSWEET34 (AtSWEET2 homologs) that were consistently upregulated across all ten genotypes in each of the western locations over three years. GmSWEET29 and GmSWEET34 are likely candidates underlying the lower seed protein content of western soybeans. GmSWEET20 (AtSWEET12 homolog) was downregulated in the western locations and may also play a role in lower seed protein content. These findings are valuable for improving soybean agriculture in western growing regions, establishing more strategic and efficient agricultural practices. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
47. Early infection response of fungal biotroph Ustilago maydis in maize.
- Author
-
Kunkun Zou, Yang Li, Wenjie Zhang, Yunfeng Jia, Yang Wang, Yuting Ma, Xiangling Lv, Yuanhu Xuan, and Wanli Du
- Subjects
USTILAGO maydis ,MYCOSES ,CORN quality ,SALICYLIC acid ,JASMONIC acid ,CORN - Abstract
Common smut, caused by Ustilago maydis (DC.) Corda, is a destructive fungal disease of maize worldwide; it forms large tumors, reducing corn yield and quality. However, the molecular defense mechanism to common smut in maize remains unclear. The present study aimed to use a leading maize inbred line Ye478 to analyze the response to U. maydis inoculation. The histological and cytological analyses demonstrated that U. maydis grew gradually to the host cells 6 h post-inoculation (hpi). The samples collected at 0, 3, 6, and 12 hpi were analyzed to assess the maize transcriptomic changes in response to U. maydis. The results revealed differences in hormone signaling, glycometabolism, and photosynthesis after U. maydis infection; specific changes were detected in jasmonic acid (JA), salicylic acid (SA), ethylene (ET), and abscisic acid (ABA) signaling pathways, glycolysis/gluconeogenesis, and photosystems I and II, probably related to defense response. MapMan analysis demonstrated that the differentially expressed genes between the treatment and control groups were clustered into light reaction and photorespiration pathways. In addition, U. maydis inoculation induced chloroplast swelling and damage, suggesting a significant effect on the chloroplast activity and subsequent metabolic process, especially hexose metabolism. A further genetic study using wild-type and galactinol-sucrose galactosyltransferase (gsg) and yellow-green leaf-1 (ygl-1) mutants identified that these two U. maydis-induced genes negatively regulated defense against common smut in maize. Our measurements showed the pathogen early-invasion process, and the key pathways of both chlorophyll biosynthesis and sugar transportation were critical modified in the infected maize line, thereby throwing a light on the molecular mechanisms in the maize-U. maydis interaction. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
48. Comparative analyses of the metabolite and ion concentrations in nectar, nectaries, and leaves of 36 bromeliads with different photosynthesis and pollinator types.
- Author
-
Göttlinger, Thomas and Lohaus, Gertrud
- Subjects
HONEY plants ,BROMELIACEAE ,NECTARIES ,NECTAR ,ION analysis ,PHOTOSYNTHESIS ,CRASSULACEAN acid metabolism ,PLANT metabolites - Abstract
Floral nectar contains mainly sugars as well as smaller amounts of amino acids and further compounds. The nectar composition varies between different plant species and it is related to the pollination type of the plant. In addition to this, other factors can influence the composition. Nectar is produced in and secreted from nectaries. A few models exist to explain the origin of nectar for dicotyl plant species, a complete elucidation of the processes, however, has not yet been achieved. This is particularly true for monocots or plant species with CAM photosynthesis. To get closer to such an elucidation, nectar, nectaries, and leaves of 36 bromeliad species were analyzed for sugars, starch, amino acids, and inorganic ions. The species studied include different photosynthesis types (CAM/C3), different pollination types (trochilophilous/chiropterophilous), or different live forms. The main sugars in nectar and nectaries were glucose, fructose, and sucrose, the total sugar concentration was about twofold higher in nectar than in nectaries, which suggests that sugars are actively transported from the nectaries into the nectar. The composition of amino acids in nectar is already determined in the nectaries, but the concentration is much lower in nectar than in nectaries, which suggests selective retention of amino acids during nectar secretion. The same applies to inorganic ions. Statistical analyses showed that the photosynthesis type and the pollination type can explain more data variation in nectar than in nectaries and leaves. Furthermore, the pollinator type has a stronger influence on the nectar or nectary composition than the photosynthesis type. Trochilophilous C3 plants showed significant correlations between the nitrate concentration in leaves and the amino acid concentration in nectaries and nectar. It can be assumed that the more nitrate is taken up, the more amino acids are synthesized in leaves and transported to the nectaries and nectar. However, chiropterophilous C3 plants show no such correlation, which means that the secretion of amino acids into the nectar is regulated by further factors. The results help understand the physiological properties that influence nectaries and nectar as well as the manner of metabolite and ion secretion from nectaries to nectar. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
49. Transcriptomic Analyses of Grapevine Leafroll-Associated Virus 3 Infection in Leaves and Berries of 'Cabernet Franc'.
- Author
-
Song, Yashu, Hanner, Robert H., and Meng, Baozhong
- Subjects
- *
GRAPEVINE leafroll virus , *CABERNET wines , *GRAPE diseases & pests , *RED wines , *VIRUS diseases , *BERRIES , *VITIS vinifera , *GRAPES - Abstract
Grapevine leafroll-associated virus 3 (GLRaV-3) is one of the most important viruses affecting global grape and wine production. GLRaV-3 is the chief agent associated with grapevine leafroll disease (GLRD), the most prevalent and economically destructive grapevine viral disease complex. Response of grapevine to GLRaV-3 infection at the gene expression level is poorly characterized, limiting the understanding of GLRaV-3 pathogenesis and viral-associated symptom development. In this research, we used RNA-Seq to profile the changes in global gene expression of Cabernet franc, a premium red wine grape, analyzing leaf and berry tissues at three key different developmental stages. We have identified 1457 differentially expressed genes (DEGs) in leaves and 1181 DEGs in berries. The expression profiles of a subset of DEGs were validated through RT-qPCR, including those involved in photosynthesis (VvPSBP1), carbohydrate partitioning (VvSUT2, VvHT5, VvGBSS1, and VvSUS), flavonoid biosynthesis (VvUFGT, VvLAR1, and VvFLS), defense response (VvPR-10.3, and VvPR-10.7), and mitochondrial activities (ETFB, TIM13, and NDUFA1). GLRaV-3 infection altered source–sink relationship between leaves and berries. Photosynthesis and photosynthate assimilation were inhibited in mature leaves while increased in young berries. The expression of genes involved in anthocyanin biosynthesis increased in GLRaV-3-infected leaves, correlating with interveinal tissue reddening, a hallmark of GLRD symptoms. Notably, we identified changes in gene expression that suggest a compromised sugar export and increased sugar retrieval in GLRaV-3-infected leaves. Genes associated with mitochondria were down-regulated in both leaves and berries of Cabernet franc infected with GLRaV-3. Results of the present study suggest that GLRaV-3 infection may disrupt mitochondrial function in grapevine leaves, leading to repressed sugar export and accumulation of sugar in mature leaf tissues. The excessive sugar accumulation in GLRaV-3-infected leaves may trigger downstream GLRD symptom development and negatively impact berry quality. We propose a working model to account for the molecular events underlying the pathogenesis of GLRaV-3 and symptom development. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
50. Phylogenetic analysis and structural prediction reveal the potential functional diversity between green algae SWEET transporters
- Author
-
Jack Fleet, Mujtaba Ansari, and Jon K. Pittman
- Subjects
Chlorophyta ,evolution ,green algae ,phylogeny ,protein structure ,sugar transport ,Plant culture ,SB1-1110 - Abstract
Sugar-Will-Eventually-be-Exported-Transporters (SWEETs) are an important family of sugar transporters that appear to be ubiquitous in all organisms. Recent research has determined the structure of SWEETs in higher plants, identified specific residues required for monosaccharide or disaccharide transport, and begun to understand the specific functions of individual plant SWEET proteins. However, in green algae (Chlorophyta) these transporters are poorly characterised. This study identified SWEET proteins from across representative Chlorophyta with the aim to characterise their phylogenetic relationships and perform protein structure modelling in order to inform functional prediction. The algal genomes analysed encoded between one and six SWEET proteins, which is much less than a typical higher plant. Phylogenetic analysis identified distinct clusters of over 70 SWEET protein sequences, taken from almost 30 algal genomes. These clusters remain separate from representative higher or non-vascular plant SWEETs, but are close to fungi SWEETs. Subcellular localisation predictions and analysis of conserved amino acid residues revealed variation between SWEET proteins of different clusters, suggesting different functionality. These findings also showed conservation of key residues at the substrate-binding site, indicating a similar mechanism of substrate selectivity and transport to previously characterised higher plant monosaccharide-transporting SWEET proteins. Future work is now required to confirm the predicted sugar transport specificity and determine the functional role of these algal SWEET proteins.
- Published
- 2022
- Full Text
- View/download PDF
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