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Since 2020, synchrotron radiation facilities in several Asia-Pacific countries have been collaborating in a major project called "SYNAPSE"(Synchrotrons for Neuroscience: an Asia-Pacific Scientific Enterprise). They use x-ray imaging to attack in a coordinated fashion one of the major issues in modern science: the structure of animal and human brains, including neurons and connections. The objective is to develop Google-like maps also including detailed structural and functional information for selected regions of interest. The sheer mass of data needed for the objective poses huge problems for the acquisition, processing, storage and use of images. In order to complete the task within a reasonable time, the key element of the SYNAPSE strategy is the parallel and coordinated work of several facilities on the same specimens. This article reviews different aspects of the enterprise, including the foundations of synchrotron radiation, coherence and of its role in advanced imaging, electron accelerators, x-ray optics and detectors. This will provide the foundation for an extensive presentation of the different components of SYNAPSE, with an overview of results already obtained within the consortium.

Breast cancer is the most common type of cancer worldwide. Diagnosing breast cancer relies on clinical examination, imaging and biopsy. A core-needle biopsy enables a morphological and biochemical characterization of the cancer and is considered the gold standard for breast cancer diagnosis. A histopathological examination uses high-resolution microscopes with outstanding contrast in the 2D plane, but the spatial resolution in the third, Z-direction, is reduced. In the present paper, we propose two high-resolution table-top systems for phase-contrast X-ray tomography of soft-tissue samples. The first system implements a classical Talbot–Lau interferometer and allows to perform ex-vivo imaging of human breast samples with a voxel size of 5.57 μm. The second system with a comparable voxel size relies on a Sigray MAAST X-ray source with structured anode. For the first time, we demonstrate the applicability of the latter to perform X-ray imaging of human breast specimens with ductal carcinoma in-situ. We assessed image quality of both setups and compared it to histology. We showed that both setups made it possible to target internal features of breast specimens with better resolution and contrast than previously achieved, demonstrating that grating-based phase-contrast X-ray CT could be a complementary tool for clinical histopathology., Scientific Reports, 13 (1), ISSN:2045-2322

Hafnia, HfO2, which is a wide band gap semiconducting oxide, is much less studied than the chemically similar zirconia (ZrO2). Here, we study the formation of hafnia nanocrystals from hafnium tetrachloride in methanol under solvothermal conditions (248 bar, 225-450 °C) using complementary in situ powder X-ray diffraction (PXRD) and Pair Distribution Function (PDF) analysis. The main structural motif of the precursor solution (HfCl4 dissolved in methanol) is a Hf oxide trimer with very similar local structure to that of m-HfO2. Different measurements on precursor solutions show large intensity variation for the Hf-Cl correlations signifying different extents of HCl elimation. A few seconds of heating lead to a correlation appearing at 3.9 Å corresponding to corner-sharing Hf-polyhedra in a disordered solid matrix. During the next minutes (depending on temperature) the disordered structure rearranges and the nearest neighbour Hf-Hf distance contracts while the Hf-O coordination number increases. After approximately 90 seconds (at T = 250 °C) the structural rearrangement terminates and 1-2 nm nanocrystals of m-HfO2 nucleate. Initially the m-HfO2 nanocrystals have significant disorder as reflected in large Hf atomic displacement parameter (ADP) values, but as the nanocrystals grow to 5-6 nm in size during extended heating, the Hf ADPs decrease toward the values obtained for ordered bulk structures. The nanocrystal growth is not well modelled by the Johnson-Mehl-Avrami expression reflecting that multiple complex chemical processes occur during this highly nonclassical nanocrystal formation under solvothermal conditions.

In this contribution, we would like to underline the peculiar chemical properties of nanome-ter scale metallic particles. To attain this goal, we select the case of DeNox catalysis (NOx reduction to nitrogen molecule) for which such nanomaterials play a crucial role. Experimental data as well as re-cent theoretical calculation through density functional theory are used to assess the relationship be-tween the adsorption mode of NO and the behaviour of nanometre scale metallic particles. Resume. Les oxydes d'azote NOx issus des gaz d'echappement des moteurs Diesel participent a la de-terioration de l'environnement, la moitie des emissions de NO leur etant imputable. Le monoxyde d'azote provient essentiellement des reactions chimiques entre l'azote de l'air et l'oxygene qui s'eta-blissent a tres haute temperature. Le defi consiste a reduire cette emission qui doit etre selective en azote (eviter la formation de N2O ou de NO2). En ce qui concerne les catalyseurs mis en & OELIG;uvre, on en distingue trois groupes : les oxydes de metaux, les metaux nobles et les zeolites. A partir de donnees ex-perimentales obtenues sur l'adsorption du NO sur des agregats monometalliques, une relation entre les modes d'adsorption de cette molzcule (adsorption molzculaire/chimisorption) et la rzponse de l'agrzgat mztallique face a cette adsorption (croissance/dissociation) a ztz proposze. Les ztudes thzo-riques baszes sur la thzorie de la fonctionnelle de la densitz confortent cette relation. Cette contri-bution przsente l'ensemble de ces rzsultats expzrimentaux et thzoriques et tache de montrer l'aspect przdictif d'une telle relation.

BACKGROUND AND OBJECTIVE: The development, control and optimisation of new x-ray breast imaging modalities could benefit from a quantitative assessment of the resulting image textures. The aim of this work was to develop a software tool for routine radiomics applications in breast imaging, which will also be available upon request. METHODS: The tool (developed in MATLAB) allows image reading, selection of Regions of Interest (ROI), analysis and comparison. Requirements towards the tool also included convenient handling of common medical and simulated images, building and providing a library of commonly applied algorithms and a friendly graphical user interface. Initial set of features and analyses have been selected after a literature search. Being open, the tool can be extended, if necessary. RESULTS: The tool allows semi-automatic extracting of ROIs, calculating and processing a total of 23 different metrics or features in 2D images and/or in 3D image volumes. Computations of the features were verified against computations with other software packages performed with test images. Two case studies illustrate the applicability of the tool - (i) features on a series of 2D 'left' and 'right' CC mammograms acquired on a Siemens Inspiration system were computed and compared, and (ii) evaluation of the suitability of newly proposed and developed breast phantoms for x-ray-based imaging based on reference values from clinical mammography images. Obtained results could steer the further development of the physical breast phantoms. CONCLUSIONS: A new image analysis toolbox was realized and can now be used in a multitude of radiomics applications, on both clinical and test images. ispartof: PHYSICA MEDICA-EUROPEAN JOURNAL OF MEDICAL PHYSICS vol:89 pages:114-128 ispartof: location:Italy status: published

Ventilation is inhomogeneous in the lungs across species. It has been hypothesized that ventilation inhomogeneity is largely determined by the design of the airway branching network. Because exchange of gases at the alveolar barrier is more efficient when gas concentrations are evenly distributed at subacinar length scales, it is assumed that a 'functional unit' of ventilation exists within the lung periphery, where gas concentration becomes uniform. On the other hand, because the morphology of pulmonary airways and alveoli, and the distribution of inhaled fluorescent particles show self-similar fractal properties over a wide range of length scales, it has been predicted that fractal dimension of ventilation approaches unity within an internally homogeneous functional unit of ventilation. However, the existence of such a functional unit has never been demonstrated experimentally due to lack of in situ gas concentration measurements of sufficient spatial resolution in the periphery of a complex bifurcating network. Here, using energy-subtractive synchrotron radiation tomography, we measured the distribution of an inert gas (Xe) in the in vivo rabbit lung during Xe wash-in breathing manoeuvres. The effects of convective flow rate, diffusion and cardiac motion were also assessed. Fractal analysis of resulting gas concentration and tissue density maps revealed that fractal dimension was always smaller for Xe than for tissue density, and that only for the gas, a length scale existed where fractal dimension approached unity. The length scale where this occurred was seen to correspond to that of a rabbit acinus, the terminal structure comprising only alveolated airways. Key points Gas ventilation is inhomogeneous in the lung of many species. However, it is not known down to what length scales this inhomogeneity persists. It is generally assumed that ventilation becomes homogeneous at subacinar length scales, beyond the spatial resolution of commonly available imaging techniques, hence this has not been demonstrated experimentally. Here we measured the distribution of inhaled Xe gas in the rabbit lung using synchrotron radiation energy-subtractive imaging and used fractal analysis to show that ventilation becomes internally uniform within regions about the size of rabbit lung acini.

X-ray spectroscopy is an important tool for scientific analysis. While the earliest demonstration experiments were realised in the laboratory, with the advent of synchrotron light sources most of the experiments shifted to large scale synchrotron facilities. In the recent past there is an increased interest to perform X-ray experiments also with in-house laboratory sources, to simplify access to X-ray absorption and X-ray emission spectroscopy, in particular for routine measurements. Here we summarise the recent developments and comment on the most representative example experiments in the field of in-house laboratory X-ray spectroscopy. We first give an introduction and some historic background on X-ray spectroscopy. This is followed by an overview of the detection techniques used for X-ray absorption and X-ray emission measurements. A short paragraph also puts related high energy resolution and resonant techniques into context, though they are not yet feasible in the laboratory. At the end of this section the opportunities using wavelength dispersive X-ray spectroscopy in the laboratory are discussed. Then we summarise the relevant details of the recent experimental laboratory setups split into two separate sections, one for the recent von Hamos setups, and one for the recent Johann/Johansson type setups. Following that, focussing on chemistry and catalysis, we then summarise some of the notable X-ray absorption and X-ray emission experiments and the results accomplished with in-house setups. In a third part we then discuss some applications of laboratory X-ray spectroscopy with a particular focus on chemistry and catalysis.

X-ray spectroscopy is an important tool for scientific analysis. While the earliest demonstration experiments were realised in the laboratory, with the advent of synchrotron light sources most of the experiments shifted to large scale synchrotron facilities. In the recent past there is an increased interest to perform X-ray experiments also with in-house laboratory sources, to simplify access to X-ray absorption and X-ray emission spectroscopy, in particular for routine measurements. Here we summarise the recent developments and comment on the most representative example experiments in the field of in-house laboratory X-ray spectroscopy. We first give an introduction and some historic background on X-ray spectroscopy. This is followed by an overview of the detection techniques used for X-ray absorption and X-ray emission measurements. A short paragraph also puts related high energy resolution and resonant techniques into context, though they are not yet feasible in the laboratory. At the end of this section the opportunities using wavelength dispersive X-ray spectroscopy in the laboratory are discussed. Then we summarise the relevant details of the recent experimental laboratory setups split into two separate sections, one for the recent von Hamos setups, and one for the recent Johann/Johansson type setups. Following that, focussing on chemistry and catalysis, we then summarise some of the notable X-ray absorption and X-ray emission experiments and the results accomplished with in-house setups. In a third part we then discuss some applications of laboratory X-ray spectroscopy with a particular focus on chemistry and catalysis., Coordination Chemistry Reviews, 423, ISSN:0010-8545

EuroCirCol is a conceptual design study of a post-LHC, Future Circular Hadron Collider (FCC-hh) with 50 TeV of beam energy and 100 km long, which aims to expand the current energy and luminosity frontiers. The vacuum chamber of the FCC-hh will have to cope with unprecedented levels of synchrotron radiation power for proton colliders, dealing simultaneously with a tighter magnet aperture. Considering that the high radiation power and photon flux will release larger amounts of gas into the system, the difficulty to meet the vacuum specifications increases substantially compared with the LHC. This paper presents a study on the beam induced vacuum effects for the FCC-hh novel conditions, the different phenomena which, owing to the presence of the beam, have an impact on the accelerator's vacuum level. It is concluded that thanks to the adopted mitigation measures the proposed vacuum system shall be adequate, allowing us to reach $\ensuremath{\le}1\ifmmode\times\else\texttimes\fi{}{10}^{15}\text{ }\text{ }{\mathrm{H}}_{2\text{ }eq}/{\mathrm{m}}^{3}$ with baseline beam parameters within the first months of conditioning.

Traditional light sources, e.g., incandescent and fluorescent lamps, are currently being replaced by white light-emitting diodes (wLEDs) because of their improved efficiency, prolonged lifetime, and environmental friendliness. Much effort has recently been spent to the development of Mn4+-doped fluoride phosphors that can enhance the color gamut in displays and improve the color rendering index, luminous efficacy of the radiation, and correlated color temperature of wLEDs used for lighting. Purity, stability, and degradation of fluoride phosphors are, however, rarely discussed. Nevertheless, the typical wet chemical synthesis routes (involving hydrogen fluoride (HF)) and the large variety of possible Mn valence states often lead to impurities that drastically influence the performance and stability of these phosphors. In this article, the origins and consequences of impurities formed during synthesis and aging of K2SiF6:Mn4+ are revealed. Both crystalline impurities such as KHF2 and ionic impurities such as Mn3+ are found to affect the phosphor performance. While Mn3+ mainly influences the optical absorption behavior, KHF2 can affect both the optical performance and chemical stability of the phosphor. Moisture leads to decomposition of KHF2, forming HF and amorphous hydrated potassium fluoride. As a consequence of hydrate formation, significant amounts of water can be absorbed in impure phosphor powders containing KHF2, facilitating the hydrolysis of [MnF6]2− complexes and affecting the optical absorption of the phosphors. Strategies are discussed to identify impurities and to achieve pure and stable phosphors with internal quantum efficiencies of more than 90%.

The limits of mammography have led to an increasing interest on possible alternatives such as the breast Computed Tomography (bCT). The common goal of all X-ray imaging techniques is to achieve the optimal contrast resolution, measured through the Contrast to Noise Ratio (CNR), while minimizing the radiological risks, quantified by the dose. Both dose and CNR depend on the energy and the intensity of the X-rays employed for the specific imaging technique. Some attempts to determine an optimal energy for bCT have suggested the range 22 keV–34 keV, some others instead suggested the range 50 keV–60 keV depending on the parameters considered in the study. Recent experimental works, based on the use of monochromatic radiation and breast specimens, show that energies around 32 keV give better image quality respect to setups based on higher energies. In this paper we report a systematic study aiming at defining the range of energies that maximizes the CNR at fixed dose in bCT. The study evaluates several compositions and diameters of the breast and includes various reconstruction algorithms as well as different dose levels. The results show that a good compromise between CNR and dose is obtained using energies around 28 keV.

High energy X-ray phase contrast tomography is tremendously beneficial to the study of thick and dense materials with poor attenuation contrast. Recently, the X-ray speckle-based imaging technique has attracted widespread interest because multimodal contrast images can now be retrieved simultaneously using an inexpensive wavefront modulator and a less stringent experimental setup. However, it is time-consuming to perform high resolution phase tomography with the conventional step-scan mode because the accumulated time overhead severely limits the speed of data acquisition for each projection. Although phase information can be extracted from a single speckle image, the spatial resolution is deteriorated due to the use of a large correlation window to track the speckle displacement. Here we report a fast data acquisition strategy utilising a fly-scan mode for near field X-ray speckle-based phase tomography. Compared to the existing step-scan scheme, the data acquisition time can be significantly reduced by more than one order of magnitude without compromising spatial resolution. Furthermore, we have extended the proposed speckle-based fly-scan phase tomography into the previously challenging high X-ray energy region (120 keV). This development opens up opportunities for a wide range of applications where exposure time and radiation dose are critical.

This paper presents a method for creation of computational models of breast lesions with irregular shapes from patient Digital Breast Tomosynthesis (DBT) images or breast cadavers and whole-body Computed Tomography (CT) images. The approach includes six basic steps: (a) normalization of the intensity of the tomographic images; (b) image noise reduction; (c) binarization of the lesion area, (d) application of morphological operations to further decrease the level of artefacts; (e) application of a region growing technique to segment the lesion; and (f) creation of a final 3D lesion model. The algorithm is semi-automatic as the initial selection of the region of the lesion and the seeds for the region growing are done interactively. A software tool, performing all of the required steps, was developed in MATLAB. The method was tested and evaluated by analysing anonymized sets of DBT patient images diagnosed with lesions. Experienced radiologists evaluated the segmentation of the tumours in the slices and the obtained 3D lesion shapes. They concluded for a quite satisfactory delineation of the lesions. In addition, for three DBT cases, a delineation of the tumours was performed independently by the radiologists. In all cases the abnormality volumes segmented by the proposed algorithm were smaller than those outlined by the experts. The calculated Dice similarity coefficients for algorithm-radiologist and radiologist-radiologist showed similar values. Another selected tumour case was introduced into a computational breast model to recursively assess the algorithm. The relative volume difference between the ground-truth tumour volume and the one obtained by applying the algorithm on the synthetic volume from the virtual DBT study is 5% which demonstrates the satisfactory performance of the proposed segmentation algorithm. The software tool we developed was used to create models of different breast abnormalities, which were then stored in a database for use by researchers working in this field. ispartof: PHYSICA MEDICA-EUROPEAN JOURNAL OF MEDICAL PHYSICS vol:57 pages:80-87 ispartof: location:Italy status: published

MSb2O4 constitutes a relatively unexplored class of multinary oxides that is traditionally synthesized by high-temperature solid-state methods. Here, we report a facile synthesis of CoSb2O4 under hydrothermal conditions (T = 135–300 °C, 256 bar). Using in situ synchrotron powder X-ray diffraction (PXRD), the formation and growth of CoSb2O4 nanoparticles are followed in real time using different precursor stoichiometries. Phase-pure CoSb2O4 can be formed at 135 °C, although the formation mechanism changes with precursor stoichiometry. The crystallite size can be fine-tuned between 14 and 17.5 nm under nonstoichiometric conditions, but crystallites twice as large are found in the stoichiometric case. An activation energy of 65(12) kJ/mol is obtained for the crystallization from a nonstoichiometric precursor. Modeling of atomic displacement parameters obtained from Rietveld refinement of multi-temperature high-resolution synchrotron PXRD data gives a Debye temperature of 331(11) K. The thermal expansion coef...

Drug delivery monitoring and tracking in the human body are two of the biggest challenges in targeted therapy to be addressed by nanomedicine. The ability of imaging drugs and micro-/nanoengineered drug carriers and of visualizing their interactions at the cellular interface in a label- free manner is crucial in providing the ability of tracking their cellular pathways and will help understand their biological impact, allowing thus to improve the therapeutic efficacy. We present a fast, label-free technique to achieve high-resolution imaging at the mid-infrared (MIR) spectrum that provides chemical information. Using our custom-made benchtop infrared microscope using a high-repetition-rate pulsed laser (80 MHz, 40 ps), we were able to acquire images with subwavelength resolution (0.8 × λ) at very high speeds. As a proof-of-concept, we embarked on the investigation of nanoengineered polyelectrolyte capsules (NPCs) containing the anticancer drug, docetaxel. These NPCs were synthesized using a layer-by-layer approach built upon a calcium carbonate (CaCO3) core, which was then removed away with ethylenediaminetetraacetic acid. The obtained MIR images show that NPCs are attached to the cell membrane, which is a good step toward an efficient drug delivery. This has been confirmed by both three-dimensional confocal fluorescence and stimulated emission depletion microscopy. Coupled with additional instrumentation and data processing advancements, this setup is capable of video-rate imaging speeds and will be significantly complementing current super-resolution microscopy techniques while providing an unperturbed view into living cells

The research program at the biomedical imaging facility requires a high-flux hard-X-ray monochromator that can also provide a wide beam. A wide energy range is needed for standard radiography, phase-contrast imaging, K-edge subtraction imaging and monochromatic beam therapy modalities. The double-crystal Laue monochromator, developed for the BioMedical Imaging and Therapy facility, is optimized for the imaging of medium- and large-scale samples at high energies with the resolution reaching 4 µm. A pair of 2 mm-thick Si(111) bent Laue-type crystals were used in fixed-exit beam mode with a 16 mm vertical beam offset and the first crystal water-cooled. The monochromator operates at energies from 25 to 150 keV, and the measured size of the beam is 189 mm (H) × 8.6 mm (V) at 55 m from the source. This paper presents our approach in developing a complete focusing model of the monochromator. The model uses mechanical properties of crystals and benders to obtain a finite-element analysis of the complete assembly. The modeling results are compared and calibrated with experimental measurements. Using the developed analysis, a rough estimate of the bending radius and virtual focus (image) position of the first crystal can be made, which is also the real source for the second crystal. On the other hand, by measuring the beam height in several points in the SOE-1 hutch, the virtual focus of the second crystal can be estimated. The focusing model was then calibrated with measured mechanical properties, the values for the force and torque applied to the crystals were corrected, and the actual operating parameters of the monochromator for fine-tuning were provided.

The next generation of lithography machines uses extreme ultraviolet (EUV) light originating from laser-produced plasma (LPP) sources, where a small tin droplet is ionized by an intense laser pulse to emit the requested light at 13.5 nm. Numerous irradiation schemes have been explored to increase conversion efficiency (CE), out of which a double-pulse approach comprising a weak picosecond Nd:YAG pre-pulse followed by a powerful pulse is considered to be very promising [1]. Nevertheless, even for such CE-optimized schemes, ion debris ejected from the plasma with kinetic energies up to several keV remain a factor that hampers the maximum performance of LPP sources. In this letter we propose a novel pre-pulse scheme consisting of a picosecond pulse pair at 1064 nm, which decreases the amount of undesirable fast ions, avoids back-reflections to the lasers and enables one to tailor the target shape., 12 pages, 3 figures, 45 references

International audience; The performance of a diamond X-ray beam position monitor is reported. This detector consists of an ionization solid-state chamber based on a thin single-crystal chemical-vapour-deposition diamond with position-sensitive resistive electrodes in a duo-lateral configuration. The detector's linearity, homogeneity and responsivity were studied on beamlines at Synchrotron SOLEIL with various beam sizes, intensities and energies. These measurements demonstrate the large and homogeneous (absorption variation of less than 0.7% over 500 µm × 500 µm) active area of the detector, with linear responses independent of the X-ray beam spatial distribution. Due to the excellent charge collection efficiency (approaching 100%) and intensity sensitivity (0.05%), the detector allows monitoring of the incident beam flux precisely. In addition, the in-beam position resolution was compared with a theoretical analysis providing an estimation of the detector's beam position resolution capability depending on the experimental conditions (X-ray flux, energy and readout acquisition time)

International audience; The x-ray atomic properties of nickel (Ni) were investigated in a unique approach combining different experimental techniques to obtain new, useful and reliable values of atomic fundamental parameters for x-ray spectrometric purposes and for comparison with theoretical predictions. We determined the mass attenuation coefficients in an energy range covering the L-and K-absorption edges, the K-shell fluorescence yield and the $K\beta$ / $K\alpha$ and $K\beta_{1,3}$/$K\alpha_{1,2}$ transition probability ratios. The obtained line profiles and linewidths of the $K\alpha$ and $K\beta$ transitions in Ni can be considered as the contribution of the satellite lines arising from the [KM] shake processes suggested by Deutsch et al (1995 Phys. Rev. A 51 283) and Ito et al (2016 Phys. Rev. A 94 042506). Comparison of the new data with several databases showed good agreement, but also discrepancies were found with existing tabulated values.

Histology and immunohistochemistry of thin tissue sections have been the standard diagnostic procedure in many diseases for decades. This method is highly specific for particular tissue regions or cells, but mechanical sectioning of the specimens is required, which destroys the sample in the process and can lead to non-uniform tissue deformations. In addition, regions of interest cannot be located beforehand and the analysis is intrinsically two-dimensional. Micro X-ray computed tomography (μCT) on the other hand can provide 3D images at high resolution and allows for quantification of tissue structures, as well as the localization of small regions of interest. These advantages advocate the use of μCT for virtual histology tool with or without subsequent classical histology. This review summarizes the most recent examples of virtual histology and provides currently known possibilities of improving contrast and resolution of μCT. Following a background in μCT imaging, ex vivo staining procedures for contrast enhancement are presented as well as label-free virtual histology approaches and the technologies, which could rapidly advance it, such as phase-contrast CT. Novel approaches such as zoom tomography and nanoparticulate contrast agents will also be considered. The current evidence suggests that virtual histology may present a valuable addition to the workflow of histological analysis, potentially reducing the workload in pathology, refining tissue classification, and supporting the detection of small malignancies. ispartof: MOLECULAR IMAGING AND BIOLOGY vol:20 issue:5 pages:732-741 ispartof: location:United States status: published

Runaways are suprathermal electrons having sufficiently high energy to be continuously accelerated up to tens of MeV by a driving electric field (Connor and Hastie 1975 Nucl. Fusion 15 415). Highly energetic runaway electron (RE) beams capable of damaging the tokamak first wall can be observed after a plasma disruption (Reux et al 2015 Nucl. Fusion 55 129501). Therefore, it is of primary importance to fully understand their generation mechanisms in order to design mitigation systems able to guarantee safe tokamak operations. In a previous work, Sommariva et al (2018 Nucl. Fusion 58), a test particle tracker was introduced in the JOREK 3D non-linear MHD code and used for studying the electron confinement during a simulated JET-like disruption. It was found in Sommariva et al (2018 Nucl. Fusion 58) that relativistic electrons are not completely deconfined by the stochastic magnetic field taking place during the disruption thermal quench (TQ). This is due to the reformation of closed magnetic surfaces at the beginning of the current quench (CQ). This result was obtained neglecting the inductive electric field in order to avoid the unrealistic particle acceleration which otherwise would have happened due to the absence of collision effects. The present paper extends (Sommariva et al 2018 Nucl. Fusion 58) analysing test electron dynamics in the same simulated JET-like disruption using the complete electric field. For doing so, a simplified collision model is introduced in the particle tracker guiding center equations. We show that electrons at thermal energies can become RE during or promptly after the TQ due to a combination of three phenomena: a first REs acceleration during the TQ due to the presence of a complex MHD-induced electric field, particle reconfinement caused by the fast reformation of closed magnetic surfaces after the TQ and a secondary acceleration induced by the CQ electric field.

[Background]: In the era of increasingly successful corrective interventions in patients with congenital heart disease (CHD), global and regional myocardial remodeling are emerging as important sources of long-term morbidity/mortality. Changes in organization of the myocardium in CHD, and in its mechanical properties, conduction, and blood supply, result in altered myocardial function both before and after surgery. To gain a better understanding and develop appropriate and individualized treatment strategies, the microscopic organization of cardiomyocytes, and their integration at a macroscopic level, needs to be completely understood. The aim of this study is to describe, for the first time, in 3 dimensions and nondestructively the detailed remodeling of cardiac microstructure present in a human fetal heart with complex CHD. [Methods and results]: Synchrotron X-ray phase-contrast imaging was used to image an archival midgestation formalin-fixed fetal heart with right isomerism and complex CHD and compare with a control fetal heart. Analysis of myocyte aggregates, at detail not accessible with other techniques, was performed. Macroanatomic and conduction system changes specific to the disease were clearly observable, together with disordered myocyte organization in the morphologically right ventricle myocardium. Electrical activation simulations suggested altered synchronicity of the morphologically right ventricle. [Conclusions]: We have shown the potential of X-ray phase-contrast imaging for studying cardiac microstructure in the developing human fetal heart at high resolution providing novel insight while preserving valuable archival material for future study. This is the first study to show myocardial alterations occur in complex CHD as early as midgestation., This study was partially supported by the Spanish Ministry of Economy and Competitiveness (grant TIN2014-52923-R and the Maria de Maeztu Units of Excellence Programme, MDM-2015-0502) and FEDER. Dr Butakoff is supported by Fundació La Marató de TV3 (Spain), grant No. 20154031. Dr Aguado-Sierra is supported by the Center of Excellence CompBioMed funded under H2020-EU.1.4.1.3. under grant agreement No. 675451. Dr Stuckey is supported by the British Heart Foundation under grant No. FS/15/33/31608.

We report on observations of the polarization of optical and {\gamma}-ray photons from the Crab nebula and pulsar system using the Galway Astronomical Stokes Polarimeter (GASP), the Hubble Space Telescope/Advanced Camera for Surveys (HST/ACS) and the International Gamma-Ray Astrophysics Laboratory satellite (Integral). These, when combined with other optical polarization observations, suggest that the polarized optical emission and {\gamma}-ray polarization changes in a similar manner. A change in the optical polarization angle has been observed by this work, from 109.5 \pm 0.7\deg in 2005 to 85.3 \pm 1.4 \deg in 2012. On the other hand, the {\gamma}-ray polarization angle changed from 115 \pm 11 \deg in 2003-2007 to 80 \pm 12 \deg in 2012-2014. Strong flaring activities have been detected in the Crab nebula over the past few years by the high energy {\gamma}-ray missions Agile and Fermi, and magnetic reconnection processes have been suggested to explain these observations. The change in the polarized optical and {\gamma}-ray emission of the Crab nebula/pulsar as observed, for the first time, by GASP and Integral may indicate that reconnection is possibly at work in the Crab nebula. We also report, for the first time, a non-zero measure of the optical circular polarization from the Crab pulsar+knot system., Comment: 9 pages accepted for publication in MNRAS

The principle of the compact Compton source is presented briefly. In collision with an ultrarelativistic electron bunch a laser pulse is back-scattered as hard X-rays. The radiation cone has an opening of a few mrad, and the energy bandwidth is a few percent. The electrons that have an energy of the order of a few tens of MeV either circulate in storage ring, or are injected to a linac at a frequency of 10-100 MHz. At the interaction point the electron bunch collides with the laser pulse that has been amplified in a Fabry-Perot resonator. There are several machines in design or construction phase, and projected fluxes are 1012 to 10(14) photons/s. The flux available at 80 keV from the ThomX machine is compared with that used in the Stereotactic Synchrotron Radiation Therapy clinical trials. It is concluded that ThomX has the potential of serving as the radiation source in future radiation therapy programs, and that ThomX can be integrated in hospital environment. (C) 2015 Published by Elsevier Ltd on behalf of Associazione Italiana di Fisica Medica.

The mechanism of Pt and PtPb nanocrystal formation under supercritical ethanol conditions has been investigated by means of in situ X-ray total scattering and pair distribution function (PDF) analysis. The metal complex structures of two different platinum precursor solutions, chloroplatinic acid and Pt(acac)(2) (acac=acetylacetonate) provide atomic-scale detail about the nucleation mechanisms after initiation of the reaction with Pb(acac)(2) by heating. The stronger Pt-O chemical bonding in the Pt(acac)(2) precursor complex compared with the Pt-Cl bonding in the chloroplatinic acid precursor complex leads to a much slower reduction of the Pt center, and this allows more optimal co-reduction conditions providing a pathway for formation of phase-pure intermetallic PtPb product. The matching chemistry of the Pt(acac)(2) and Pb(acac)(2) precursors allow development of a facile continuous flow supercritical ethanol process for obtaining phase-pure hexagonal PtPb nanocrystals. The study thus highlights the importance of in situ studies in revealing atomic-scale information about nucleation mechanisms, which can be used in design of specific synthesis pathways, and the new continuous-flow process to obtain PtPb nanocrystals holds potential for large-scale production.

Objectives Bisphosphonates (BP) are the first-line treatment for preventing fragility fractures. However, concern regarding the efficacy is growing because bisphosphonate is associated with over-suppression of remodelling and accumulation of microcracks. While DEXA scanning may show a gain in bone density the impact of this class of drug on mechanical properties remains unclear. We therefore sought to quantify the mechanical strength of bone treated with BP (oral alendronate for this study), and correlate this with the microarchitecture and density of microcracks in comparison with untreated controls. Methods Trabecular bone from hip-fracture patients treated with BP (n=10) was compared to naïve fractured (n=14) and non-fractured controls (n=6). Trabecular cores were synchrotron and micro-CT scanned for microstructural analysis including quantification of bone volume fraction, micro-architecture and microcracks, then mechanically tested in compression. Results BP bone was 28% lower in strength than untreated hip-fracture bone and 48% lower in strength than and non-fracture control bone (4.6 vs 6.4 vs 8.9 MPa). BP treated bone had 24% more microcracks than naïve fractured bone and 51% more than non-fractured control (8.12 vs 6.55 vs 5.25 /cm2). BP and naïve fracture bone exhibited similar trabecular microarchitecture, with significantly lower bone volume fraction and connectivity than non-fractured controls. Conclusions BP therapy had no detectable mechanical benefit. Instead its use was associated with substantially reduced bone strength. This low strength was probably due to the greater accumulation of microcracks and a lack of any discernible improvement in bone volume or microarchitecture. This preliminary study suggests that the clinical impact of BP induced microcrack accumulation may be substantial and long term.

Photoionization of a buckminsterfullerene ion is investigated using an ion trap and a merged beam setup coupled to synchrotron radiation beamlines and compared to theoretical calculations. Absolute measurements derived from the ion trap experiment allow discrepancies concerning the photoionization cross section of C-60(+) to be solved.

Scientific reports 7, 43114 (2017). doi:10.1038/srep43114, Reciprocity is when wave or quantum scattering satisfies a symmetry property, connecting a scattering process with the reversed one. While reciprocity involves the interchange of source and detector, it is fundamentally different from rotational invariance, and is a generalization of time reversal invariance, occurring in absorptive media as well. Due to its presence at diverse areas of physics, it admits a wide variety of applications. For polarization dependent scatterings, reciprocity is often violated, but violation in the phase of the scattering amplitude is much harder to experimentally observe than violation in magnitude. Enabled by the advantageous properties of nuclear resonance scattering of synchrotron radiation, we have measured maximal, i.e., 180-degree, reciprocity violation in the phase. For accessing phase information, we introduced a new version of stroboscopic detection. The scattering setting was devised based on a generalized reciprocity theorem that opens the way to construct new types of reciprocity related devices., Published by Macmillan, London

Computed x-ray phase contrast micro-tomography is the most valuable tool for a three dimensional (3D) and non destructive analysis of the tissue engineered bone morphology. We used a Talbot interferometer installed at SYRMEP beamline of the ELETTRA synchrotron (Trieste, Italy) for a precise 3D reconstruction of both bone and soft connective tissue, regenerated in vivo within a porous scaffold. For the first time the x-ray tomographic reconstructions have been combined with x-ray scanning micro-diffraction measurement on the same sample, in order to give an exhaustive identification of the different tissues participating to the biomineralization process. As a result, we were able to investigate in detail the different densities in the tissues, distinguishing the 3D organization of the amorphous calcium phosphate from the collagen matrix. Our experimental approach allows for a deeper understanding of the role of collagen matrix in the organic-mineral transition, which is a crucial issue for the development of new bio-inspired composites.

peer-reviewed Although confocal infrared (IR) absorption micro-spectroscopy is well established for far-field chemical imaging, its scope remains restricted since diffraction limits the spatial resolution to values a little above half the radiation wavelength. Yet, the successful implementations of below-the-diffraction limit far-field fluorescence microscopies using saturated irradiation patterns for example for stimulated-emission depletion and saturated structured-illumination suggest the possibility of using a similar optical patterning strategy for infrared absorption mapping at high resolution. Simulations are used to show that the simple mapping of the difference in transmitted/reflected IR energy between a saturated vortex-shaped beam and a Gaussian reference with a confocal microscope affords the generation of high-resolution vibrational absorption images. On the basis of experimentally relevant parameters, the simulations of the differential absorption scheme reveal a spatial resolution better than a tenth of the wavelength for incident energies about a decade above the saturation threshold. The saturated structured illumination concepts are thus expected to be compatible with the establishment of point-like point-spread functions for measuring the absorbance of samples with a scanning confocal microscope recording the differential transmission/reflection. (C) 2013 Optical Society of America PUBLISHED peer-reviewed

High-resolution X-ray Computed Tomography (HRXCT) or micro-CT (μCT) is a frequently used non-destructive 3D imaging and analysis technique for the investigation of internal structures of a large variety of objects, including geomaterials. Although the possibilities of X-ray micro-CT are becoming better appreciated in earth science research, the demands on this technique are also approaching certain physical limitations. As such, there remains a lot of research to be done in order to solve all the technical problems that occur when higher demands are put on the technique. In this paper, a review of the principle, the advantages and limitations of X-ray CT itself are presented, together with an overview of some current applications of micro-CT in geosciences. One of the main advantages of this technique is the fact that it is a non-destructive characterization technique which allows 4D monitoring of internal structural changes at resolutions down to a few hundred nanometres. Limitations of this technique are the operator dependency for the 3D image analysis from the reconstructed data, the discretization effects and possible imaging artefacts. Driven by the technological and computational progress, the technique is continuously growing as an analysis tool in geosciences and is becoming one of the standard techniques, as is shown by the large and still increasing number of publications in this research area. It is foreseen that this number will continue to rise, and micro-CT will become an indispensable technique in the field of geosciences.

International audience; Single-photon, two-electron photodetachment from nickel phthalocyanine tetrasulfonic acid tetra anions, [NiPc](4-), was examined in the gas-phase using a linear ion trap coupled to the DESIRS VUV beamline of the SOLEIL Synchrotron. This system was chosen since it has a low detachment energy, known charge localization, and well-defined geometrical and electronic structures. A threshold for two-electron loss is observed at 10.2 eV, around 1 eV lower than previously observed double detachment thresholds on multiple charged protein anions. The photodetachment energy of [NiPc](4-) has been previously determined to be 3.5 eV and the photodetachment energy of [NiPc](3-center dot) is determined in this work to be 4.3 eV. The observed single photon double electron detachment threshold is hence 5.9 eV higher than the energy required for sequential single electron loss. Possible mechanisms are for double photodetachment are discussed. These observations pave the way toward new, exciting experiments for probing double photodetachment at relatively low energies, including correlation measurements on emitted photoelectrons.

Experiments have been carried out to evaluate the threshold electric field for runaway generation during the flat-top phase of ohmic discharges in the Frascati Tokamak Upgrade tokamak. An investigation of the conditions for runaway electron generation and suppression has been performed for a wide range of plasma parameter values. The measured threshold electric field is found to be significantly larger (similar to 2 - 5 times) than predicted by the relativistic collissional theory of runaway generation, E-R = n(e) e(3) ln Lambda/4 pi e(0)(2) m(e) c(2), and can be explained to a great extent by an increase of the critical electric field due to the effect of the electron synchrotron radiation losses. These findings are consistent with the results of an ITPA joint experiment to study the onset, growth, and decay of relativistic runaway electrons [Granetz et al., Phys. Plasmas 21, 072506 (2014)]. Confirmation of these results for disruptions with high electric field might imply significantly lower requirements on electron densities for suppression and prevention of runaway formation in ITER. This work was carried out with financial support from Dirección General de Investigación, Científica y Técnica, Project No. ENE2012-31753 (MINECO; Spain). Publicado

The application of serial femtosecond crystallography to naturally occurring peroxisomal protein crystals within yeast cells is described. The concept of utilizing peroxisomes for the production of protein nanocrystals is outlined., The possibility of using femtosecond pulses from an X-ray free-electron laser to collect diffraction data from protein crystals formed in their native cellular organelle has been explored. X-ray diffraction of submicrometre-sized alcohol oxidase crystals formed in peroxisomes within cells of genetically modified variants of the methylotrophic yeast Hansenula polymorpha is reported and characterized. The observations are supported by synchrotron radiation-based powder diffraction data and electron microscopy. Based on these findings, the concept of in cellulo serial crystallography on protein targets imported into yeast peroxisomes without the need for protein purification as a requirement for subsequent crystallization is outlined.

We discuss two techniques of ultrafast X-ray science implemented at synchrotrons with application to the study of the real-time dynamics of chemical systems in solution. Time-resolved X-ray scattering and absorption offer complementary ways to study geometrical structural changes in a wide variety of systems. We present a few examples that demonstrate their ability to obtain structural information on timescales ranging from milliseconds down to hundreds of femtoseconds. (C) 2010 Elsevier Ltd. All rights reserved.

The isomer shift for the 23.87 keV M1 resonant transition in the (119)Sn nucleus is calibrated with the help of ab initio calculations. The calibration constant alpha((119)Sn) obtained from Hartree-Fock (HF) calculations (alpha(HF)((119)Sn) = (0.081+/-0.002)a(0)(-3) mm/s) and from second-order Moller-Plesset (MP2) calculations (alpha(MP2)((119)Sn) = (0.091+/-0.002)a(0)(-3) mm/s) are in good agreement with the previously obtained values. The importance of a proper treatment of electron correlation effects is demonstrated on the basis of a statistical analysis of the results of the calibration. The approach used in the calibration is applied to study the (119)Sn isomer shift in CaSnO(3) perovskite under pressure. Comparison with the experimental results for the pressure range of 0-36 GPa shows that the current methodology is capable of describing tiny variations of isomer shift with reasonable accuracy.

Mossbauer spectroscopy is a widely used analytic too] which provides information about local electronic Structure of solid materials on an atomic scale. The isomer shift of resonance nuclear gamma transition is a sensitive parameter which depends on the charge and spin state of the resonating atom as well as on its chemical environment. Theory underlying the isomer shift is reviewed and its connection to the local electronic structure is discussed. A review of advances made in the ob initio calculation of isomer shift is presented. The importance of Careful calibration of the parameters of nuclear gamma transitions on the basis of high-level quantum chemical calculations With the inclusion of both relativistic effects and electron correlation is underlined. With the help of accurate theoretical calculations of the isomer shift over a wide range of chemical environments deeper understanding of a relationship between the observed spectroscopic parameters and the electronic Structure of materials will be gained. (C) 2008 Elsevier B.V. All rights reserved.

Mossbauer spectroscopy is a widely used analytic too] which provides information about local electronic Structure of solid materials on an atomic scale. The isomer shift of resonance nuclear gamma transition is a sensitive parameter which depends on the charge and spin state of the resonating atom as well as on its chemical environment. Theory underlying the isomer shift is reviewed and its connection to the local electronic structure is discussed. A review of advances made in the ob initio calculation of isomer shift is presented. The importance of Careful calibration of the parameters of nuclear gamma transitions on the basis of high-level quantum chemical calculations With the inclusion of both relativistic effects and electron correlation is underlined. With the help of accurate theoretical calculations of the isomer shift over a wide range of chemical environments deeper understanding of a relationship between the observed spectroscopic parameters and the electronic Structure of materials will be gained. (C) 2008 Elsevier B.V. All rights reserved.