358 results on '"Saager, Rolf B."'
Search Results
2. Evaluation of the robustness of cerebral oximetry to variations in skin pigmentation using a tissue-simulating phantom.
- Author
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Afshari, Ali, Saager, Rolf B, Burgos, David, Vogt, William C, Wang, Jianting, Mendoza, Gonzalo, Weininger, Sandy, Sung, Kung-Bin, Durkin, Anthony J, and Pfefer, T Joshua
- Subjects
Paediatrics ,Biomedical and Clinical Sciences ,Bioengineering ,Pediatric ,Optical Physics ,Materials Engineering ,Ophthalmology and optometry ,Biomedical engineering ,Atomic ,molecular and optical physics - Abstract
Clinical studies have demonstrated that epidermal pigmentation level can affect cerebral oximetry measurements. To evaluate the robustness of these devices, we have developed a phantom-based test method that includes an epidermis-simulating layer with several melanin concentrations and a 3D-printed cerebrovascular module. Measurements were performed with neonatal, pediatric and adult sensors from two commercial oximeters, where neonatal probes had shorter source-detector separation distances. Referenced blood oxygenation levels ranged from 30 to 90%. Cerebral oximeter outputs exhibited a consistent decrease in saturation level with simulated melanin content; this effect was greatest at low saturation levels, producing a change of up to 15%. Dependence on pigmentation was strongest in a neonatal sensor, possibly due to its high reflectivity. Overall, our findings indicate that a modular channel-array phantom approach can provide a practical tool for assessing the impact of skin pigmentation on cerebral oximeter performance and that modifications to algorithms and/or instrumentation may be needed to mitigate pigmentation bias.
- Published
- 2022
3. OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system
- Author
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Applegate, Matthew B, Karrobi, Kavon, Angelo, Joseph P, Austin, Wyatt, Tabassum, Syeda M, Aguénounon, Enagnon, Tilbury, Karissa, Saager, Rolf B, Gioux, Sylvain, and Roblyer, Darren
- Subjects
Engineering ,Biomedical Engineering ,Equipment Design ,Hemoglobins ,Image Processing ,Computer-Assisted ,Optical Imaging ,Oxyhemoglobins ,Phantoms ,Imaging ,Spectrum Analysis ,diffuse optics ,frequency domain ,modulated imaging ,open source ,optical properties ,spatial frequency domain imaging ,Optical Physics ,Opthalmology and Optometry ,Optics ,Ophthalmology and optometry ,Biomedical engineering ,Atomic ,molecular and optical physics - Abstract
Significance: Spatial frequency domain imaging (SFDI) is a diffuse optical measurement technique that can quantify tissue optical absorption (μa) and reduced scattering (μs') on a pixel-by-pixel basis. Measurements of μa at different wavelengths enable the extraction of molar concentrations of tissue chromophores over a wide field, providing a noncontact and label-free means to assess tissue viability, oxygenation, microarchitecture, and molecular content. We present here openSFDI: an open-source guide for building a low-cost, small-footprint, three-wavelength SFDI system capable of quantifying μa and μs' as well as oxyhemoglobin and deoxyhemoglobin concentrations in biological tissue. The companion website provides a complete parts list along with detailed instructions for assembling the openSFDI system. Aim: We describe the design of openSFDI and report on the accuracy and precision of optical property extractions for three different systems fabricated according to the instructions on the openSFDI website. Approach: Accuracy was assessed by measuring nine tissue-simulating optical phantoms with a physiologically relevant range of μa and μs' with the openSFDI systems and a commercial SFDI device. Precision was assessed by repeatedly measuring the same phantom over 1 h. Results: The openSFDI systems had an error of 0 ± 6 % in μa and -2 ± 3 % in μs', compared to a commercial SFDI system. Bland-Altman analysis revealed the limits of agreement between the two systems to be ± 0.004 mm - 1 for μa and -0.06 to 0.1 mm - 1 for μs'. The openSFDI system had low drift with an average standard deviation of 0.0007 mm - 1 and 0.05 mm - 1 in μa and μs', respectively., Conclusion: The openSFDI provides a customizable hardware platform for research groups seeking to utilize SFDI for quantitative diffuse optical imaging.
- Published
- 2020
4. Hyperspectral imaging in the spatial frequency domain with a supercontinuum source
- Author
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Torabzadeh, Mohammad, Stockton, Patrick, Kennedy, Gordon T, Saager, Rolf B, Durkin, Anthony J, Bartels, Randy A, and Tromberg, Bruce J
- Subjects
Engineering ,Biomedical Engineering ,Bioengineering ,Algorithms ,Animals ,Cattle ,Coloring Agents ,Equipment Design ,Image Processing ,Computer-Assisted ,Lasers ,Models ,Biological ,Muscle ,Skeletal ,Optical Imaging ,Phantoms ,Imaging ,tissue optical properties ,hyperspectral ,spatial frequency domain imaging ,supercontinuum laser ,Optical Physics ,Opthalmology and Optometry ,Optics ,Ophthalmology and optometry ,Biomedical engineering ,Atomic ,molecular and optical physics - Abstract
We introduce a method for quantitative hyperspectral optical imaging in the spatial frequency domain (hs-SFDI) to image tissue absorption (μa) and reduced scattering (μs') parameters over a broad spectral range. The hs-SFDI utilizes principles of spatial scanning of the spectrally dispersed output of a supercontinuum laser that is sinusoidally projected onto the tissue using a digital micromirror device. A scientific complementary metal-oxide-semiconductor camera is used for capturing images that are demodulated and analyzed using SFDI computational models. The hs-SFDI performance is validated using tissue-simulating phantoms over a range of μa and μs' values. Quantitative hs-SFDI images are obtained from an ex-vivo beef sample to spatially resolve concentrations of oxy-, deoxy-, and met-hemoglobin, as well as water and fat fractions. Our results demonstrate that the hs-SFDI can quantitatively image tissue optical properties with 1000 spectral bins in the 580- to 950-nm range over a wide, scalable field of view. With an average accuracy of 6.7% and 12.3% in μa and μs', respectively, compared to conventional methods, hs-SFDI offers a promising approach for quantitative hyperspectral tissue optical imaging.
- Published
- 2019
5. Impact of hemoglobin breakdown products in the spectral analysis of burn wounds using spatial frequency domain spectroscopy
- Author
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Saager, Rolf B, Rowland, Rebecca A, Baldado, Melissa L, Kennedy, Gordon T, Bernal, Nicole P, Ponticorvo, Adrien, Christy, Robert J, and Durkin, Anthony J
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Engineering ,Biomedical Engineering ,Physical Injury - Accidents and Adverse Effects ,Aetiology ,2.1 Biological and endogenous factors ,Algorithms ,Animals ,Burns ,Disease Models ,Animal ,Hemoglobins ,Least-Squares Analysis ,Melanins ,Methemoglobin ,Monte Carlo Method ,Optical Imaging ,Oxygen ,Oxyhemoglobins ,Skin ,Spectrophotometry ,Swine ,Water ,Wound Healing ,burns ,hemoglobin ,methemoglobin ,spectroscopy ,multispectral imaging ,spatial frequency domain spectroscopy ,Optical Physics ,Opthalmology and Optometry ,Optics ,Ophthalmology and optometry ,Biomedical engineering ,Atomic ,molecular and optical physics - Abstract
Burn wounds and wound healing invoke several biological processes that may complicate the interpretation of spectral imaging data. Through analysis of spatial frequency domain spectroscopy data (450 to 1000 nm) obtained from longitudinal investigations using a graded porcine burn wound healing model, we have identified features in the absorption spectrum that appear to suggest the presence of hemoglobin breakdown products, e.g., methemoglobin. Our results show that the calculated concentrations of methemoglobin directly correlate with burn severity, 24 h after the injury. In addition, tissue parameters such as oxygenation (StO2) and water fraction may be underestimated by 20% and 78%, respectively, if methemoglobin is not included in the spectral analysis.
- Published
- 2019
6. Method using in vivo quantitative spectroscopy to guide design and optimization of low-cost, compact clinical imaging devices: emulation and evaluation of multispectral imaging systems
- Author
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Saager, Rolf B, Baldado, Melissa L, Rowland, Rebecca A, Kelly, Kristen M, and Durkin, Anthony J
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tissue optics ,multispectral imaging ,reflectance spectroscopy ,Optical Physics ,Biomedical Engineering ,Opthalmology and Optometry ,Optics - Published
- 2018
7. Evaluation of a pointwise microcirculation assessment method using liquid and multilayered tissue simulating phantoms
- Author
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Fredriksson, Ingemar, Saager, Rolf B, Durkin, Anthony J, and Strömberg, Tomas
- Subjects
Engineering ,Physical Sciences ,Biomedical Engineering ,Dermatology ,Humans ,Laser-Doppler Flowmetry ,Microcirculation ,Models ,Biological ,Monte Carlo Method ,Oxygen ,Phantoms ,Imaging ,Skin ,diffuse reflectance spectroscopy ,optical phantoms ,multilayered tissue model ,microcirculation ,inverse Monte Carlo ,sampling volume ,Optical Physics ,Opthalmology and Optometry ,Optics ,Ophthalmology and optometry ,Biomedical engineering ,Atomic ,molecular and optical physics - Abstract
A fiber-optic probe-based instrument, designed for assessment of parameters related to microcirculation, red blood cell tissue fraction (fRBC), oxygen saturation (SO2), and speed resolved perfusion, has been evaluated using state-of-the-art tissue phantoms. The probe integrates diffuse reflectance spectroscopy (DRS) at two source-detector separations and laser Doppler flowmetry, using an inverse Monte Carlo method for identifying the parameters of a multilayered tissue model. Here, we characterize the accuracy of the DRS aspect of the instrument using (1) liquid blood phantoms containing yeast and (2) epidermis-dermis mimicking solid-layered phantoms fabricated from polydimethylsiloxane, titanium oxide, hemoglobin, and coffee. The root-mean-square (RMS) deviations for fRBC for the two liquid phantoms were 11% and 5.3%, respectively, and 11% for the solid phantoms with highest hemoglobin signatures. The RMS deviation for SO2 was 5.2% and 2.9%, respectively, for the liquid phantoms, and 2.9% for the solid phantoms. RMS deviation for the reduced scattering coefficient (μs'), for the solid phantoms was 15% (475 to 850 nm). For the liquid phantoms, the RMS deviation in average vessel diameter (D) was 1 μm. In conclusion, the skin microcirculation parameters fRBC and SO2, as well as, μs' and D are estimated with reasonable accuracy.
- Published
- 2017
8. MicroRNA-155 mediates multiple gene regulations pertinent to the role of human adipose-derived mesenchymal stem cells in skin regeneration
- Author
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Shahin, Hady, primary, Belcastro, Luigi, additional, Das, Jyotirmoy, additional, Perdiki Grigoriadi, Marina, additional, Saager, Rolf B., additional, Steinvall, Ingrid, additional, Sjöberg, Folke, additional, Olofsson, Pia, additional, Elmasry, Moustafa, additional, and El-Serafi, Ahmed T., additional
- Published
- 2024
- Full Text
- View/download PDF
9. Portable (handheld) clinical device for quantitative spectroscopy of skin, utilizing spatial frequency domain reflectance techniques
- Author
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Saager, Rolf B, Dang, An N, Huang, Samantha S, Kelly, Kristen M, and Durkin, Anthony J
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Engineering ,Physical Sciences ,Biomedical Engineering ,Bioengineering ,Skin ,Spectrum Analysis ,Chemical Sciences ,Applied Physics ,Chemical sciences ,Physical sciences - Abstract
Spatial Frequency Domain Spectroscopy (SFDS) is a technique for quantifying in-vivo tissue optical properties. SFDS employs structured light patterns that are projected onto tissues using a spatial light modulator, such as a digital micromirror device. In combination with appropriate models of light propagation, this technique can be used to quantify tissue optical properties (absorption, μa, and scattering, μs', coefficients) and chromophore concentrations. Here we present a handheld implementation of an SFDS device that employs line (one dimensional) imaging. This instrument can measure 1088 spatial locations that span a 3 cm line as opposed to our original benchtop SFDS system that only collects a single 1 mm diameter spot. This imager, however, retains the spectral resolution (∼1 nm) and range (450-1000 nm) of our original benchtop SFDS device. In the context of homogeneous turbid media, we demonstrate that this new system matches the spectral response of our original system to within 1% across a typical range of spatial frequencies (0-0.35 mm-1). With the new form factor, the device has tremendously improved mobility and portability, allowing for greater ease of use in a clinical setting. A smaller size also enables access to different tissue locations, which increases the flexibility of the device. The design of this portable system not only enables SFDS to be used in clinical settings but also enables visualization of properties of layered tissues such as skin.
- Published
- 2017
10. Solid tissue simulating phantoms having absorption at 970 nm for diffuse optics
- Author
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Kennedy, Gordon T, Lentsch, Griffin R, Trieu, Brandon, Ponticorvo, Adrien, Saager, Rolf B, and Durkin, Anthony J
- Subjects
Medical and Biological Physics ,Engineering ,Physical Sciences ,Bioengineering ,Diagnostic Imaging ,Optical Devices ,Optics and Photonics ,Phantoms ,Imaging ,Silicones ,tissue simulating phantoms ,diffuse optical spectroscopy ,turbid media ,inverse adding-doubling ,integrating sphere ,water ,Optical Physics ,Biomedical Engineering ,Opthalmology and Optometry ,Optics ,Ophthalmology and optometry ,Biomedical engineering ,Atomic ,molecular and optical physics - Abstract
Tissue simulating phantoms can provide a valuable platform for quantitative evaluation of the performance of diffuse optical devices. While solid phantoms have been developed for applications related to characterizing exogenous fluorescence and intrinsic chromophores such as hemoglobin and melanin, we report the development of a poly(dimethylsiloxane) (PDMS) tissue phantom that mimics the spectral characteristics of tissue water. We have developed these phantoms to mimic different water fractions in tissue, with the purpose of testing new devices within the context of clinical applications such as burn wound triage. Compared to liquid phantoms, cured PDMS phantoms are easier to transport and use and have a longer usable life than gelatin-based phantoms. As silicone is hydrophobic, 9606 dye was used to mimic the optical absorption feature of water in the vicinity of 970 nm. Scattering properties are determined by adding titanium dioxide, which yields a wavelength-dependent scattering coefficient similar to that observed in tissue in the near-infrared. Phantom properties were characterized and validated using the techniques of inverse adding-doubling and spatial frequency domain imaging. Results presented here demonstrate that we can fabricate solid phantoms that can be used to simulate different water fractions
- Published
- 2017
11. Design and fabrication of solid phantoms for NIR water fraction studies
- Author
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Kennedy, Gordon T, Lentsch, Griffin R, Trieu, Brandon, Ponticorvo, Adrien, Saager, Rolf B, and Durkin, Anthony J
- Subjects
Engineering ,Communications Engineering ,Electronics ,Sensors and Digital Hardware ,Physical Sciences ,Atomic ,Molecular and Optical Physics ,tissue simulating phantoms ,diffuse optical spectroscopy ,turbid media ,Communications engineering ,Electronics ,sensors and digital hardware ,Atomic ,molecular and optical physics - Abstract
Tissue simulating phantoms provide a valuable platform for quantitative evaluation of the performance of diffuse optical devices. In this paper we report the development of a poly(dimethylsiloxane) (PDMS) tissue phantom that mimics the spectral characteristics of tissue water. We have developed these phantoms to mimic different water fractions in tissue for testing new devices within the context of clinical applications such as burn wound triage. Compared to liquid phantoms, PDMS phantoms are easier to transport and use, and have a longer usable life than gelatin based phantoms. The pthalocyanine dye 9606 was used to provide an absorption feature of in the vicinity of 970 nm. Scattering properties were independently determined by adding titanium dioxide powder to obtain reduced scattering coefficients similar to that of tissue in the near infrared. Phantom properties were characterized using the techniques of inverse adding doubling and spatial frequency doma in imaging. Results presented here demonstrate that we can fabricate solid phantoms that can be used to simulate different water fractions.
- Published
- 2017
12. Handheld spatial frequency domain spectrographic imager for depth-sensitive, quantitative spectroscopy of skin tissue
- Author
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Saager, Rolf B, Dang, An N, Huang, Samantha S, Kelly, Kristen M, and Durkin, Anthony J
- Abstract
Here we present a handheld, implementation of Spatial Frequency Domain Spectroscopy (SFDS) that employs line imaging. The new instrument can measure 1088 spatial locations that span a 3 cm line as opposed to our benchtop system that only collects a single 1 mm diameter spot. This imager, however, retains the spectral resolution (∼ 1 nm) and range (450 to 1000 nm) of our benchtop system. The device also has tremendously improved mobility and portability, allowing for greater ease of use in clinical setting. A smaller size also enables access to different tissue locations, which increases the flexibility of the device. The design of this portable system not only enables SFDS to be used in clinical settings, but also enables visualization of properties of layered tissues such as skin.
- Published
- 2017
13. Low-cost tissue simulating phantoms with adjustable wavelength-dependent scattering properties in the visible and infrared ranges
- Author
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Saager, Rolf B, Quach, Alan, Rowland, Rebecca A, Baldado, Melissa L, and Durkin, Anthony J
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Dimethylpolysiloxanes ,Infrared Rays ,Light ,Optical Imaging ,Particle Size ,Phantoms ,Imaging ,tissue phantom ,optical properties ,tissue spectroscopy ,layered media ,Optical Physics ,Biomedical Engineering ,Opthalmology and Optometry ,Optics - Abstract
We present a method for low-cost fabrication of polydimethylsiloxane (PDMS) tissue simulating phantoms with tunable scattering spectra, spanning visible, and near-infrared regimes. These phantoms use optical polishing agents (aluminum oxide powders) at various grit sizes to approximate in vivo tissue scattering particles across multiple size distributions (range: 17 to 3 μm). This class of tunable scattering phantoms is used to mimic distinct changes in wavelength-dependent scattering properties observed in tissue pathologies such as partial thickness burns. Described by a power-law dependence on wavelength, the scattering magnitude of these phantoms scale linearly with particle concentration over a physiologic range [μs′=(0.5 to 2.0 mm−1)] whereas the scattering spectra, specific to each particle size distribution, correlate to distinct exponential coefficients (range: 0.007 to 0.32). Aluminum oxide powders used in this investigation did not detectably contribute to the absorption properties of these phantoms. The optical properties of these phantoms are verified through inverse adding-doubling methods and the tolerances of this fabrication method are discussed.
- Published
- 2016
14. In vivo isolation of the effects of melanin from underlying hemodynamics across skin types using spatial frequency domain spectroscopy
- Author
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Saager, Rolf B, Sharif, Ata, Kelly, Kristen M, and Durkin, Anthony J
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Bioengineering ,1.1 Normal biological development and functioning ,Underpinning research ,Skin ,Female ,Hemodynamics ,Humans ,Male ,Melanins ,Skin Pigmentation ,Spectrum Analysis ,oximetry ,tissue optics ,structured illumination ,turbid media ,optical properties ,diffuse optical spectroscopy ,spatial frequency domain ,melanin ,Optical Physics ,Biomedical Engineering ,Opthalmology and Optometry ,Optics - Abstract
Skin is a highly structured tissue, raising concerns as to whether skin pigmentation due to epidermal melanin may confound accurate measurements of underlying hemodynamics. Using both venous and arterial cuff occlusions as a means of inducing differential hemodynamic perturbations, we present analyses of spectra limited to the visible or near-infrared regime, in addition to a layered model approach. The influence of melanin, spanning Fitzpatrick skin types I to V, on underlying estimations of hemodynamics in skin as interpreted by these spectral regions are assessed. The layered model provides minimal cross-talk between melanin and hemodynamics and enables removal of problematic correlations between measured tissue oxygenation estimates and skin phototype.
- Published
- 2016
15. Optical properties of mouse brain tissue after optical clearing with FocusClear™
- Author
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Moy, Austin J, Capulong, Bernard V, Saager, Rolf B, Wiersma, Matthew P, Lo, Patrick C, Durkin, Anthony J, and Choi, Bernard
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Engineering ,Biomedical Engineering ,Neurosciences ,Animals ,Brain ,Computer Simulation ,Image Interpretation ,Computer-Assisted ,Light ,Mice ,Mice ,Inbred C3H ,Microscopy ,Fluorescence ,Models ,Biological ,Organ Culture Techniques ,Organ Preservation Solutions ,Scattering ,Radiation ,Solutions ,optical clearing ,tissue optics ,optical properties ,scattering ,Optical Physics ,Opthalmology and Optometry ,Optics ,Ophthalmology and optometry ,Biomedical engineering ,Atomic ,molecular and optical physics - Abstract
Fluorescence microscopy is commonly used to investigate disease progression in biological tissues. Biological tissues, however, are strongly scattering in the visible wavelengths, limiting the application of fluorescence microscopy to superficial (
- Published
- 2015
16. In vivo measurements of cutaneous melanin across spatial scales: using multiphoton microscopy and spatial frequency domain spectroscopy
- Author
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Saager, Rolf B, Balu, Mihaela, Crosignani, Viera, Sharif, Ata, Durkin, Anthony J, Kelly, Kristen M, and Tromberg, Bruce J
- Published
- 2015
17. Quantitative short-wave infrared multispectral imaging of in vivo tissue optical properties
- Author
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Wilson, Robert H, Nadeau, Kyle P, Jaworski, Frank B, Rowland, Rebecca, Nguyen, John Q, Crouzet, Christian, Saager, Rolf B, Choi, Bernard, Tromberg, Bruce J, and Durkin, Anthony J
- Subjects
Physical Sciences ,Engineering ,Nanotechnology ,Algorithms ,Animals ,Burns ,Equipment Design ,Equipment Failure Analysis ,Optical Imaging ,Pilot Projects ,Rats ,Rats ,Sprague-Dawley ,Reproducibility of Results ,Sensitivity and Specificity ,Skin ,Spectroscopy ,Near-Infrared ,wide-field optical imaging ,short-wave infrared imaging ,spatial frequency domain imaging ,multispectral imaging ,optical properties ,Optical Physics ,Biomedical Engineering ,Opthalmology and Optometry ,Optics ,Ophthalmology and optometry ,Biomedical engineering ,Atomic ,molecular and optical physics - Abstract
Extending the wavelength range of spatial frequency domain imaging (SFDI) into the short-wave infrared (SWIR) has the potential to provide enhanced sensitivity to chromophores such as water and lipids that have prominent absorption features in the SWIR region. Here, we present, for the first time, a method combining SFDI with unstructured (zero spatial frequency) illumination to extract tissue absorption and scattering properties over a wavelength range (850 to 1800 nm) largely unexplored by previous tissue optics techniques. To obtain images over this wavelength range, we employ a SWIR camera in conjunction with an SFDI system. We use SFDI to obtain in vivo tissue reduced scattering coefficients at the wavelengths from 850 to 1050 nm, and then use unstructured wide-field illumination and an extrapolated power-law fit to this scattering spectrum to extract the absorption spectrum from 850 to 1800 nm. Our proof-of-principle experiment in a rat burn model illustrates that the combination of multispectral SWIR imaging, SFDI, and unstructured illumination can characterize in vivo changes in skin optical properties over a greatly expanded wavelength range. In the rat burn experiment, these changes (relative to normal, unburned skin) included increased absorption and increased scattering amplitude and slope, consistent with changes that we previously reported in the near-infrared using SFDI.
- Published
- 2014
18. Polarization-Sensitive Hyperspectral Imaging in vivo: A Multimode Dermoscope for Skin Analysis
- Author
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Vasefi, Fartash, MacKinnon, Nicholas, Saager, Rolf B, Durkin, Anthony J, Chave, Robert, Lindsley, Erik H, and Farkas, Daniel L
- Subjects
diffuse-reflectance ,melanoma ,light ,pigmentation ,tissues ,lesions ,fluorescence ,hemoglobin ,absorption ,melafind - Published
- 2014
19. Multi-frequency spatial frequency domain imaging: a depth-resolved optical scattering model to isolate scattering contrast in thin layers of skin.
- Author
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Belcastro, Luigi, Jonasson, Hanna, and Saager, Rolf B.
- Subjects
LIGHT scattering ,OPTICAL images ,WOUND healing ,OPTICAL measurements ,INSPECTION & review ,OPTICAL coherence tomography ,TISSUES - Abstract
Significance: Current methods for wound healing assessment rely on visual inspection, which gives qualitative information. Optical methods allow for quantitative non-invasive measurements of optical properties relevant to wound healing. Aim: Spatial frequency domain imaging (SFDI) measures the absorption and reduced scattering coefficients of tissue. Typically, SFDI assumes homogeneous tissue; however, layered structures are present in skin. We evaluate a multifrequency approach to process SFDI data that estimates depth-specific scattering over differing penetration depths. Approach: Multi-layer phantoms were manufactured to mimic wound healing scattering contrast in depth. An SFDI device imaged these phantoms and data were processed according to our multi-frequency approach. The depth sensitive data were then compared with a two-layer scattering model based on light fluence. Results: The measured scattering from the phantoms changed with spatial frequency as our two-layer model predicted. The performance of two δ-P1 models solutions for SFDI was consistently better than the standard diffusion approximation. Conclusions: We presented an approach to process SFDI data that returns depth-resolved scattering contrast. This method allows for the implementation of layered optical models that more accurately represent physiologic parameters in thin tissue structures as in wound healing. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
20. Quantitative near infrared spectroscopic analysis of Q-Switched Nd:YAG treatment of generalized argyria.
- Author
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Saager, Rolf B, Hassan, Khaled M, Kondru, Clement, Durkin, Anthony J, and Kelly, Kristen M
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Humans ,Argyria ,Spectroscopy ,Near-Infrared ,Middle Aged ,Female ,Laser Therapy ,Lasers ,Solid-State ,argyria ,Nd:YAG ,quantitative spectroscopy ,NIR spectroscopy ,tissue optics ,Spectroscopy ,Near-Infrared ,Lasers ,Solid-State ,Dermatology & Venereal Diseases ,Clinical Sciences - Abstract
Background and objectiveGeneralized argyria is a blue-gray hyperpigmentation of the skin resulting from ingestion or application of silver compounds, such as silver colloid. Case reports have noted improvement after Q-Switched Neodymium-Yttrium Aluminum Garnet laser (1,064 nm QS Nd:YAG) laser treatment to small surface areas. No reports have objectively monitored laser treatment of generalized argyria over large areas of skin, nor have long-term outcomes been evaluated.Study design/materials and methodsAn incremental treatment plan was developed for a subject suffering from argyria. A quantitative near infrared spectroscopic measurement technique was employed to non-invasively analyze tissue-pigment characteristics pre- and post-laser treatment. Post-treatment measurements were collected at weeks 1, 2, 3, and 4, and again at 1 year.ResultsImmediate apparent removal of pigment was observed with 1 Q-switched 1,064 nm Nd:YAG laser treatment (3-6 mm spot; 0.8-2 J/cm(2) ) per area. Entire face, neck, upper chest, and arms were treated over multiple sessions. Treatments were very painful and general anesthesia was utilized in order to treat large areas. Near-infrared spectroscopy was used to characterize and quantify the concentration of silver particles in the dermis based on the absorption features of the silver particles as well as the optical scattering effects they impart. We were able to estimate that there was, on average, 0.042 mg/ml concentration of silver prior to treatment and that these levels went below the minimum detectable limit of the instrument post-treatment. There was no recurrence of discoloration over the 1-year study period.ConclusionQS 1,064 nm laser treatment of argyria is a viable method to restore normal skin pigmentation with no evidence of recurrence over study period. Quantitative spectroscopic measurements: (1) confirmed dyspigmentation was due to silver, (2) validated our clinical assessment of no recurrence up to 1-year post-treatment, and (3) indicated no collateral tissue damage with treatments.
- Published
- 2013
21. Development of Spatial Frequency Domain Instrument for the Quantification of Layer Specific Optical Properties of Pigmented Lesions
- Author
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Saager, Rolf B, Au, Kendrew, Kelly, Kristen M, and Durkin, Anthony J
- Abstract
A clinical, spatially modulated quantitative spectroscopy (SMoQS) instrument has been designed and deployed to evaluate its ability to quantitatively isolate layer-specific optical properties of pigmented lesions in skin in vivo. © OSA 2012.
- Published
- 2012
22. Quantitative fluorescence imaging of protoporphyrin IX through determination of tissue optical properties in the spatial frequency domain.
- Author
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Saager, Rolf B, Cuccia, David J, Saggese, Steve, Kelly, Kristen M, and Durkin, Anthony J
- Subjects
Skin ,Humans ,Aminolevulinic Acid ,Protoporphyrins ,Photosensitizing Agents ,Diagnostic Imaging ,Spectrometry ,Fluorescence ,Monte Carlo Method ,Reproducibility of Results ,Phantoms ,Imaging ,Absorption ,Light ,Scattering ,Radiation ,Image Processing ,Computer-Assisted ,fluorescence imaging ,turbid media ,tissue optics ,absorption ,scattering ,Spectrometry ,Fluorescence ,Phantoms ,Imaging ,Scattering ,Radiation ,Image Processing ,Computer-Assisted ,Bioengineering ,Cancer ,Optics ,Optical Physics ,Opthalmology and Optometry ,Biomedical Engineering - Abstract
The ability to quantitatively determine tissue fluorescence is of interest for the purpose of better understanding the details of photodynamic therapy of skin cancer. In particular, we are interested in quantifying protoporphyrin IX (PpIX) in vivo. We present a method of correcting fluorescence for effects of native tissue absorption and scattering properties in a spatially resolved manner that preserves the resolution of the fluorescence imaging system, based off a homogeneous representation of tissue. Validation was performed using a series of liquid turbid phantoms having varying concentrations of absorber, scatterer, and fluorophore (PpIX). Through the quantification of tissue optical properties via spatial frequency domain imaging, an empirical model based on Monte Carlo simulations was deployed to successfully decouple the effects of absorption and scattering from fluorescence. From this we were able to deduce the concentration of the PpIX to within 0.2 μg/ml of the known concentration. This method was subsequently applied to the determination of PpIX concentration from in vivo normal skin where the model-based correction determined a concentration of 1.6 μg/ml, which is in agreement with literature.
- Published
- 2011
23. Effects of motion on optical properties in the spatial frequency domain.
- Author
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Nguyen, John Quan, Saager, Rolf B, Cuccia, David J, Kelly, Kristen M, Jakowatz, James, Hsiang, David, and Durkin, Anthony J
- Subjects
Skin ,Humans ,Skin Diseases ,Diagnostic Imaging ,Reproducibility of Results ,Phantoms ,Imaging ,Absorption ,Movement ,Algorithms ,Models ,Biological ,Image Processing ,Computer-Assisted ,Middle Aged ,Male ,spatial frequency domain imaging ,modulated imaging ,motion correction and compensation ,Phantoms ,Imaging ,Models ,Biological ,Image Processing ,Computer-Assisted ,Bioengineering ,4.1 Discovery and preclinical testing of markers and technologies ,Optics ,Optical Physics ,Opthalmology and Optometry ,Biomedical Engineering - Abstract
Spatial frequency domain imaging (SFDI) is a noncontact and wide-field optical imaging technology currently being used to study the optical properties and chromophore concentrations of in vivo skin including skin lesions of various types. Part of the challenge of developing a clinically deployable SFDI system is related to the development of effective motion compensation strategies, which in turn, is critical for recording high fidelity optical properties. Here we present a two-part strategy for SFDI motion correction. After verifying the effectiveness of the motion correction algorithm on tissue-simulating phantoms, a set of skin-imaging data was collected in order to test the performance of the correction technique under real clinical conditions. Optical properties were obtained with and without the use of the motion correction technique. The results indicate that the algorithm presented here can be used to render optical properties in moving skin surfaces with fidelities within 1.5% of an ideal stationary case and with up to 92.63% less variance. Systematic characterization of the impact of motion variables on clinical SFDI measurements reveals that until SFDI instrumentation is developed to the point of instantaneous imaging, motion compensation is necessary for the accurate localization and quantification of heterogeneities in a clinical setting.
- Published
- 2011
24. Method for depth-resolved quantitation of optical properties in layered media using spatially modulated quantitative spectroscopy.
- Author
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Saager, Rolf B, Truong, Alex, Cuccia, David J, and Durkin, Anthony J
- Subjects
Skin ,Humans ,Spectroscopy ,Near-Infrared ,Nephelometry and Turbidimetry ,Spectrum Analysis ,Monte Carlo Method ,Phantoms ,Imaging ,Models ,Biological ,Optical Phenomena ,spectroscopy ,tissues ,turbid media ,spatial frequencies ,reflectance ,Spectroscopy ,Near-Infrared ,Phantoms ,Imaging ,Models ,Biological ,Optics ,Optical Physics ,Opthalmology and Optometry ,Biomedical Engineering - Abstract
We have demonstrated that spatially modulated quantitative spectroscopy (SMoQS) is capable of extracting absolute optical properties from homogeneous tissue simulating phantoms that span both the visible and near-infrared wavelength regimes. However, biological tissue, such as skin, is highly structured, presenting challenges to quantitative spectroscopic techniques based on homogeneous models. In order to more accurately address the challenges associated with skin, we present a method for depth-resolved optical property quantitation based on a two layer model. Layered Monte Carlo simulations and layered tissue simulating phantoms are used to determine the efficacy and accuracy of SMoQS to quantify layer specific optical properties of layered media. Initial results from both the simulation and experiment show that this empirical method is capable of determining top layer thickness within tens of microns across a physiological range for skin. Layer specific chromophore concentration can be determined to
- Published
- 2011
25. Motion correction in spatial frequency domain imaging; optical property determination in pigmented lesions
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Nguyen, John Quan, Saager, Rolf B, Cuccia, David J, Kelly, Kristen M, Hsiang, David, and Durkin, Anthony J
- Abstract
Background and Objective: Spatial Frequency Domain Imaging (SFDI) is a non-contact wide-field optical imaging technology currently being used to study the optical properties and chromophore concentrations of in-vivo malignant melanomas and benign pigmented lesions. Our objective is to develop a motion correction procedure in order to assess the concerns of subject-motion related variables during clinical measurements. Study Design/Materials and Methods: SFDI motion-correction is a two-part procedure which utilizes a fiduciary marker and canny-edge detection in order to reposition and align the frame-to-frame regions-of-interest (ROI). Motioninduced phase-shifts are subsequently sampled before the entire image-set is processed by a modified demodulation formula. By comparing the results of the adjusted processing method with data gathered from the current non-corrected method, we were able to systematically characterize the impact of motion variables on SFDI measurements. Results: Motion-corrected SFDI data from moving phantom measurements and clinical patient measurements showed up to 84.58% decrease in absorption (μa) variance and up to 92.63% decrease in reduced-scattering (μs') variance. Stationary phantom test-measurements showed almost no difference between motion corrected and standard processing. Conclusion: SFDI motion correction is necessary for obtaining high-fidelity in-vivo optical property measurements of pigmented lesions in a clinical setting. © 2011 Copyright SPIE - The International Society for Optical Engineering.
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- 2011
26. Postoperative Quantitative Assessment of Reconstructive Tissue Status in a Cutaneous Flap Model Using Spatial Frequency Domain Imaging
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Yafi, Amr, Vetter, Thomas S, Scholz, Thomas, Patel, Sarin, Saager, Rolf B, Cuccia, David J, Evans, Gregory R, and Durkin, Anthony J
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Biomedical and Clinical Sciences ,Ophthalmology and Optometry ,Bioengineering ,Animals ,Hemoglobins ,Male ,Necrosis ,Optical Phenomena ,Oxygen ,Oxyhemoglobins ,Rats ,Rats ,Sprague-Dawley ,Skin ,Spectroscopy ,Near-Infrared ,Surgical Flaps ,Clinical Sciences ,Surgery ,Clinical sciences ,Dentistry - Abstract
BackgroundThe purpose of this study was to investigate the capabilities of a novel optical wide-field imaging technology known as spatial frequency domain imaging to quantitatively assess reconstructive tissue status.MethodsTwenty-two cutaneous pedicle flaps were created on 11 rats based on the inferior epigastric vessels. After baseline measurement, all flaps underwent vascular ischemia, induced by clamping the supporting vessels for 2 hours (either arteriovenous or selective venous occlusions); normal saline was injected into the control flap and hypertonic-hyperoncotic saline solution was injected into the experimental flap. Flaps were monitored for 2 hours after reperfusion. The spatial frequency domain imaging system was used for quantitative assessment of flap status over the duration of the experiment.ResultsAll flaps demonstrated a significant decline in oxyhemoglobin and tissue oxygen saturation in response to occlusion. Total hemoglobin and deoxyhemoglobin were increased markedly in the selective venous occlusion group. After reperfusion and the administration of solutions, oxyhemoglobin and tissue oxygen saturation in those flaps that survived gradually returned to baseline levels. However, flaps for which oxyhemoglobin and tissue oxygen saturation did not show any signs of recovery appeared to be compromised and eventually became necrotic within 24 to 48 hours in both occlusion groups.ConclusionsSpatial frequency domain imaging technology provides a quantitative, objective method of assessing tissue status. This study demonstrates the potential of this optical technology to assess tissue perfusion in a very precise and quantitative way, enabling wide-field visualization of physiologic parameters. The results of this study suggest that spatial frequency domain imaging may provide a means for prospectively identifying dysfunctional flaps well in advance of failure.
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- 2011
27. A LED BASED IMAGING SYSTEM FOR OPTIMIZATION OF PHOTODYNAMIC THERAPY OF BASAL CELL CARCINOMA
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Saager, Rolf B, Cuccia, David J, Saggesse, Steven, Kelly, Kristen M, and Durkin, Anthony J
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Clinical Sciences ,Dermatology & Venereal Diseases - Published
- 2011
28. A LED based spatial frequency domain imaging system for optimization of photodynamic therapy of Basal Cell Carcinoma (BCC)
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Saager, Rolf B, Cuccia, David J, Saggese, Steven, Kelly, Kristen M, and Durkin, Anthony J
- Abstract
A LED based spatial frequency domain imaging (SFDI) system has been developed to provide personalized photodynamic therapy for BCC. We present the instrument design, validation of performance and initial characterization of wide-field properties of BCC. © 2010 Optical Society of America.
- Published
- 2010
29. Multilayer silicone phantoms for the evaluation of quantitative optical techniques in skin imaging
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Saager, Rolf B, Kondru, Clement, Au, Kendrew, Sry, Kelly, Ayers, Frederick, and Durkin, Anthony J
- Subjects
optical phantom ,tissue spectroscopy ,layered media ,optical properties - Abstract
With the development of multilayer models for the analysis of quantitative spectroscopic techniques, there is a need to generate controlled and stable phantoms capable of validating these new models specific to the particular instrument performance and/or probe geometry. Direct applications for these multilayer phantoms include characterization or validation of depth penetration for specific probe geometries or describing layer specific sensitivity of optical instrumentation. We will present a method of producing interchangeable silicone phantoms that vary in thickness from 90 microns up to several millimeters which can be combined to produce multilayered structures to mimic optical properties of physiologic tissues such as skin. The optical properties of these phantoms are verified through inverse addingdoubling methods and the homogeneous distribution of optical properties will be discussed. © 2010 Copyright SPIE - The International Society for Optical Engineering.
- Published
- 2010
30. Determination of optical properties of turbid media spanning visible and near-infrared regimes via spatially modulated quantitative spectroscopy.
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Saager, Rolf B, Cuccia, David J, and Durkin, Anthony J
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Forearm ,Skin ,Humans ,Water ,Melanins ,Hemoglobins ,Oxyhemoglobins ,Spectroscopy ,Near-Infrared ,Nephelometry and Turbidimetry ,Spectrum Analysis ,Least-Squares Analysis ,Reproducibility of Results ,Phantoms ,Imaging ,spectroscopy ,tissues ,turbid media ,absorption ,scattering ,Spectroscopy ,Near-Infrared ,Phantoms ,Imaging ,Optics ,Optical Physics ,Opthalmology and Optometry ,Biomedical Engineering - Abstract
We present a novel, noncontact method for the determination of quantitative optical properties of turbid media from 430 to 1050 nm. Through measuring the broadband reflectance from an unknown sample as a function of the spatial frequency of the projected illumination patterns, the absolute absorption and reduced scattering coefficients can be calculated without a priori assumptions of the chromophores present. This technique, which is called spatially modulated quantitative spectroscopy (SMoQS), was validated through the quantification of optical properties of homogenous liquid phantoms with known concentrations of absorbers and scatterers. The properties of the phantoms were recovered across the range of values prepared with R(2) values of 0.985 and 0.996 for absorption and reduced scattering, respectively. A measurement was also performed on skin tissue as a demonstration of the method's performance in vivo. The resultant absorption spectrum was well described by a multichromophore fit, and the quantitative values for oxy- and deoxyhemoglobin, water, and melanin were within published ranges for skin.
- Published
- 2010
31. Development of a novel line scanner for speckle contrast diffuse correlation tomography of microvascular blood flow
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Johansson, Johannes, primary and Saager, Rolf B., additional
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- 2023
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32. Beneath the skin: multi-frequency SFDI to detect thin layers of skin using light scattering
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Belcastro, Luigi, primary, Jonasson, Hanna, additional, Strömberg, Tomas, additional, Elserafy, Ahmed, additional, and Saager, Rolf B., additional
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- 2023
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33. Microcirculatory response to lower body negative pressure and the association to large vessel function
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Jonasson, Hanna, primary, Henricson, Joakim, additional, Saager, Rolf B., additional, and Wilhelms, Daniel, additional
- Published
- 2023
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34. Influence of optical aberrations on depth-specific spatial frequency domain techniques
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Majedy, Motasam, primary, Das, Nandan K., additional, Johansson, Johannes, additional, and Saager, Rolf B., additional
- Published
- 2022
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35. Water and hemoglobin modulated gelatin-based phantoms to spectrally mimic inflamed tissue in the validation of biomedical techniques and the modeling of microdialysis data
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Jonasson, Hanna, Anderson, Chris D, Saager, Rolf B., Jonasson, Hanna, Anderson, Chris D, and Saager, Rolf B.
- Abstract
Significance: Tissue simulating phantoms are an important part of validating biomedical optical techniques. Tissue pathology in inflammation and oedema involves changes in both water and hemoglobin fractions. Aim: We present a method to create solid gelatin-based phantoms mimicking inflammation and oedema with adjustable water and hemoglobin fractions. Approach: One store-bought gelatin and one research grade gelatin were evaluated. Different water fractions were obtained by varying the water-to-gelatin ratio. Ferrous stabilized human hemoglobin or whole human blood was added as absorbers, and the stability and characteristics of each were compared. Intralipid® was used as the scatterer. All phantoms were characterized using spatial frequency domain spectroscopy. Results: The estimated water fraction varied linearly with expected values (R2 = 0.96 for the store-bought gelatin and R2 = 0.99 for the research grade gelatin). Phantoms including ferrous stabilized hemoglobin stayed stable up to one day but had methemoglobin present at day 0. The phantoms with whole blood remained stable up to 3 days using the store-bought gelatin. Conclusions: A range of physiological relevant water fractions was obtained for both gelatin types, with the stability of the phantoms including hemoglobin differing between the gelatin type and hemoglobin preparation. These low-cost phantoms can incorporate other water-based chromophores and be fabricated as thin sheets to form multilayered structures., Funding: This research was financially supported by Knut and Alice Wallenberg Foundation’s Center for Molecular Medicine at Linkoping University (WCMM) and Hudfonden’s Edvard Welander och Finsenstiftelsen.
- Published
- 2022
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36. Spectral characterization of liquid hemoglobin phantoms with varying oxygenation states
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Majedy, Motasam, Saager, Rolf B., Strömberg, Tomas, Larsson, Marcus, Salerud, Göran E., Majedy, Motasam, Saager, Rolf B., Strömberg, Tomas, Larsson, Marcus, and Salerud, Göran E.
- Abstract
Significance: For optical methods to accurately assess hemoglobin oxygen saturation in vivo, an independently verifiable tissue-like standard is required for validation. For this purpose, we propose three hemoglobin preparations and evaluate methods to characterize them. Aim: To spectrally characterize three different hemoglobin preparations using multiple spectroscopic methods and to compare their absorption spectra to commonly used reference spectra. Approach: Absorption spectra of three hemoglobin preparations in solution were characterized using spectroscopic collimated transmission: whole blood, lysed blood, and ferrous-stabilized hemoglobin. Tissue-mimicking phantoms composed of Intralipid, and the hemoglobin solutions were characterized using spatial frequency-domain spectroscopy (SFDS) and enhanced perfusion and oxygen saturation (EPOS) techniques while using yeast to deplete oxygen. Results: All hemoglobin preparations exhibited similar absorption spectra when accounting for methemoglobin and scattering in their oxyhemoglobin and deoxyhemoglobin forms, respectively. However, systematic differences were observed in the fitting depending on the reference spectra used. For the tissue-mimicking phantoms, SFDS measurements at the surface of the phantom were affected by oxygen diffusion at the interface with air, associated with higher values than for the EPOS system. Conclusions: We show the validity of different blood phantoms and what considerations need to be addressed in each case to utilize them equivalently., Funding: VINNOVA grants [2016-02211, 2017-01435, 2019-01522]; Alice Wallenberg Foundations Center for Molecular Medicine at Linkoping University (WCMM)
- Published
- 2022
- Full Text
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37. Influence of optical aberrations on depth-specific spatial frequency domain techniques
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Majedy, Motasam, Das, Nandan K., Johansson, Johannes, Saager, Rolf B., Majedy, Motasam, Das, Nandan K., Johansson, Johannes, and Saager, Rolf B.
- Abstract
Significance Spatial frequency domain imaging (SFDI) and spatial frequency domain spectroscopy (SFDS) are emerging tools to non-invasively assess tissues. However, the presence of aberrations can complicate processing and interpretation. Aim This study develops a method to characterize optical aberrations when performing SFDI/S measurements. Additionally, we propose a post-processing method to compensate for these aberrations and recover arbitrary subsurface optical properties. Approach Using a custom SFDS system, we extract absorption and scattering coefficients from a reference phantom at 0 to 15 mm distances from the ideal focus. In post-processing, we characterize aberrations in terms of errors in absorption and scattering relative to the expected in-focus values. We subsequently evaluate a compensation approach in multi-distance measurements of phantoms with different optical properties and in multi-layer phantom constructs to mimic subsurface targets. Results Characterizing depth-specific aberrations revealed a strong power law such as wavelength dependence from ∼40 to ∼10 % error in both scattering and absorption. When applying the compensation method, scattering remained within 1.3% (root-mean-square) of the ideal values, independent of depth or top layer thickness, and absorption remained within 3.8%. Conclusions We have developed a protocol that allows for instrument-specific characterization and compensation for the effects of defocus and chromatic aberrations on spatial frequency domain measurements., Funding: Knut and Alice Wallenberg Foundations Center for Molecular Medicine at Linkoeping University (WCMM)
- Published
- 2022
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- View/download PDF
38. Water and hemoglobin modulated gelatin-based phantoms to spectrally mimic inflamed tissue in the validation of biomedical techniques and the modeling of microdialysis data
- Author
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Jonasson, Hanna, primary, Anderson, Chris D., additional, and Saager, Rolf B., additional
- Published
- 2022
- Full Text
- View/download PDF
39. Two-detector Corrected Near Infrared Spectroscopy (C-NIRS) detects hemodynamic activation responses more robustly than single-detector NIRS
- Author
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Saager, Rolf B., Telleri, Nicole L., and Berger, Andrew J.
- Published
- 2011
- Full Text
- View/download PDF
40. Spectral characterization of liquid hemoglobin phantoms with varying oxygenation states
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Majedy, Motasam, primary, Saager, Rolf B., additional, Strömberg, Tomas, additional, Larsson, Marcus, additional, and Salerud, E. Göran, additional
- Published
- 2021
- Full Text
- View/download PDF
41. Microcirculatory response to lower body negative pressure and the association to large vessel function
- Author
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Choi, Bernard, Zeng, Haishan, Jonsson, Hanna, Henricson, Joakim, Saager, Rolf B., and Wilhelms, Daniel
- Published
- 2023
- Full Text
- View/download PDF
42. Correction: Characterization of nanosensitive multifractality in submicron scale tissue morphology and its alteration in tumor progression (vol 26, 016003, 2021)
- Author
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Das, Nandan, Alexandrov, Sergey, Gilligan, Katie E., Dwyer, Roisin M., Saager, Rolf B., Ghosh, Nirmalya, and Leahy, Martin
- Subjects
Cancer och onkologi ,Cancer and Oncology - Abstract
n/a
- Published
- 2021
43. Characterization of nanosensitive multifractality in submicron scale tissue morphology and its alteration in tumor progression
- Author
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Das, Nandan, Alexandrov, Sergey, Gilligan, Katie E., Dwyer, Róisín M., Saager, Rolf B., Ghosh, Nirmalya, Leahy, Martin, Das, Nandan, Alexandrov, Sergey, Gilligan, Katie E., Dwyer, Róisín M., Saager, Rolf B., Ghosh, Nirmalya, and Leahy, Martin
- Abstract
Significance: Assessment of disease using optical coherence tomography is an actively investigated problem, owing to many unresolved challenges in early disease detection, diagnosis, and treatment response monitoring. The early manifestation of disease or precancer is typically associated with subtle alterations in the tissue dielectric and ultrastructural morphology. In addition, biological tissue is known to have ultrastructural multifractality. Aim: Detection and characterization of nanosensitive structural morphology and multifractality in the tissue submicron structure. Quantification of nanosensitive multifractality and its alteration in progression of tumor. Approach: We have developed a label free nanosensitive multifractal detrended fluctuation analysis(nsMFDFA) technique in combination with multifractal analysis and nanosensitive optical coherence tomography (nsOCT). The proposed method deployed for extraction and quantification of nanosensitive multifractal parameters in mammary fat pad (MFP). Results: Initially, the nsOCT approach is numerically validated on synthetic submicron axial structures. The nsOCT technique was applied to pathologically characterized MFP of murine breast tissue to extract depth-resolved nanosensitive submicron structures. Subsequently, two-dimensional MFDFA were deployed on submicron structural en face images to extract nanosensitive tissue multifractality. We found that nanosensitive multifractality increases in transition from healthy to tumor. Conclusions: This method for extraction of nanosensitive tissue multifractality promises to provide a noninvasive diagnostic tool for early disease detection and monitoring treatment response. The novel ability to delineate the dominant submicron scale nanosensitive multifractal properties may also prove useful for characterizing a wide variety of complex scattering media of non-biological origin., Funding agencies: Irish Research Council (IRC), under Government of IrelandIrish Research Council for Science, Engineering and Technology [GOIPD/2017/837]; Knut and AliceWallenberg Foundation through theWallenberg Centre for Molecular Medicine (WCMM) at Linkoping Universit
- Published
- 2021
- Full Text
- View/download PDF
44. Spectral characterization of liquid hemoglobin phantoms with varying oxygenation states
- Author
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Majedy, Motasam, Saager, Rolf B., Strömberg, Tomas, Larsson, Marcus, Salerud, Göran E., Majedy, Motasam, Saager, Rolf B., Strömberg, Tomas, Larsson, Marcus, and Salerud, Göran E.
- Abstract
Significance: For optical methods to accurately assess hemoglobin oxygen saturation in vivo, an independently verifiable tissue-like standard is required for validation. For this purpose, we propose three hemoglobin preparations and evaluate methods to characterize them. Aim: To spectrally characterize three different hemoglobin preparations using multiple spectroscopic methods and to compare their absorption spectra to commonly used reference spectra. Approach: Absorption spectra of three hemoglobin preparations in solution were characterized using spectroscopic collimated transmission: whole blood, lysed blood, and ferrous-stabilized hemoglobin. Tissue-mimicking phantoms composed of Intralipid, and the hemoglobin solutions were characterized using spatial frequency-domain spectroscopy (SFDS) and enhanced perfusion and oxygen saturation (EPOS) techniques while using yeast to deplete oxygen. Results: All hemoglobin preparations exhibited similar absorption spectra when accounting for methemoglobin and scattering in their oxyhemoglobin and deoxyhemoglobin forms, respectively. However, systematic differences were observed in the fitting depending on the reference spectra used. For the tissue-mimicking phantoms, SFDS measurements at the surface of the phantom were affected by oxygen diffusion at the interface with air, associated with higher values than for the EPOS system. Conclusions: We show the validity of different blood phantoms and what considerations need to be addressed in each case to utilize them equivalently., Funding: This research was financially supported by VINNOVA grants via the Swelife and MedTech4Health programs (Grant Nos. 2016-02211, 2017-01435, and 2019-01522) and the Knut and Alice Wallenberg Foundation’s Center for Molecular Medicine at Linköping University (WCMM).
- Published
- 2021
- Full Text
- View/download PDF
45. Evaluation of cell therapy for burn wound using spatial frequency domain imaging
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Belcastro, Luigi, primary, Jonasson, Hanna, additional, Strömberg, Tomas, additional, Elserafi, Ahmed, additional, and Saager, Rolf B., additional
- Published
- 2021
- Full Text
- View/download PDF
46. Portable visible and near-infrared spatial frequency domain imaging system to measure skin reactivity in response to noxious heating using a multi-spectral compound eye camera
- Author
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Das, Nandan Kumar, primary, Nagi, Saad S., additional, Kagawa, Keiichiro, additional, Tanida, Jun, additional, and Saager, Rolf B., additional
- Published
- 2021
- Full Text
- View/download PDF
47. Characterization of nano sensitive sub-micron scale tissue-structural multifractality and its alteration in tumor progress
- Author
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Das, Nandan, Alexandrov, Sergey, Dwyer, Róisín M., Saager, Rolf B., Ghosh, Nirmalya, Leahy, Martin, Das, Nandan, Alexandrov, Sergey, Dwyer, Róisín M., Saager, Rolf B., Ghosh, Nirmalya, and Leahy, Martin
- Abstract
Assessment of disease using OCT is an actively investigated problem, owing to many unresolved challenges in early disease detection, diagnosis and treatment response monitoring. The spatial scale to which the information can be obtained from the scattered light is limited by the diffraction limit (~λ/2; λ = wavelength of light is typically in the micron level) and the axial resolution of OCT systems is limited by the inverse of spectral bandwidth. Yet, onset or progression of disease /precancer is typically associated with subtle alterations in the tissue dielectric and its ultra-structural morphology. On the other hand, biological tissue is known to have ultra-structural multifractality. For both the fundamental study of biological processes and early diagnosis of pathological processes, information on the nanoscale in the tissue sub-micron structural morphology is crucial. Therefore, we have developed a novel spectroscopic and label-free 3D OCT system with nanoscale sensitivity in combination of multifractal analysis for extraction and quantification of tissue ultra-structural multifractal parameters. This present approach demonstrated its capability to measure nano-sensitive tissue ultra-structural multifractality. In an initial study, we found that nano-sensitive sub-micron structural multifractality changes in transition from healthy to tumor in pathologically characterized fresh tissue samples. This novel method for extraction of nanosensitive tissue multifractality promises to develop a non-invasive diagnosis tool for early cancer detection.
- Published
- 2020
- Full Text
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48. Handheld multispectral imager for quantitative skinassessment in low resource settings
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Belcastro, Luigi, Jonasson, Hanna, Strömberg, Tomas, Saager, Rolf B., Belcastro, Luigi, Jonasson, Hanna, Strömberg, Tomas, and Saager, Rolf B.
- Abstract
Significance: Spatial frequency domain imaging (SFDI) is a quantitative imaging method to measure absorption and scattering of tissue, from which several chromophore concentrations (e.g., oxy-/deoxy-/meth-hemoglobin, melanin, and carotenoids) can be calculated. Employing a method to extract additional spectral bands from RGB components (that we named cross-channels), we designed a handheld SFDI device to account for these pigments, using low-cost, consumer-grade components for its implementation and characterization. Aim: With only three broad spectral bands (red, green, blue, or RGB), consumer-grade devices are often too limited. We present a methodology to increase the number of spectral bands in SFDI devices that use RGB components without hardware modification. Approach: We developed a compact low-cost RGB spectral imager using a color CMOS camera and LED-based mini projector. The components’ spectral properties were characterized and additional cross-channel bands were calculated. An alternative characterization procedure was also developed that makes use of low-cost equipment, and its results were compared. The device performance was evaluated by measurements on tissue-simulating optical phantoms and in-vivo tissue. The measurements were compared with another quantitative spectroscopy method: spatial frequency domain spectroscopy (SFDS). Results: Out of six possible cross-channel bands, two were evaluated to be suitable for our application and were fully characterized (520 ± 20 nm; 556 ± 18 nm). The other four cross-channels presented a too low signal-to-noise ratio for this implementation. In estimating the optical properties of optical phantoms, the SFDI data have a strong linear correlation with the SFDS data (R2 = 0.987, RMSE = 0.006 for μa, R2 = 0.994, RMSE = 0.078 for μs′). Conclusions: We extracted two additional spectral bands from a commercial RGB system at no cost. There was good agreement between our devi, Funding agencies: Knut and Alice Wallenberg FoundationKnut & Alice Wallenberg Foundation
- Published
- 2020
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49. OpenSFDI : an open-source guide for constructing a spatial frequency domain imaging system
- Author
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Applegate, Matthew B., Karrobi, Kavon, Angelo Jr., Joseph P., Austin, Wyatt M., Tabassum, Syeda M., Aguénounon, Enagnon, Tilbury, Karissa, Saager, Rolf B., Gioux, Sylvain, Roblyer, Darren M., Applegate, Matthew B., Karrobi, Kavon, Angelo Jr., Joseph P., Austin, Wyatt M., Tabassum, Syeda M., Aguénounon, Enagnon, Tilbury, Karissa, Saager, Rolf B., Gioux, Sylvain, and Roblyer, Darren M.
- Abstract
Significance: Spatial frequency domain imaging (SFDI) is a diffuse optical measurement technique that can quantify tissue optical absorption (μa) and reduced scattering (μ0 s) on a pixelby-pixel basis. Measurements of μa at different wavelengths enable the extraction of molar concentrations of tissue chromophores over a wide field, providing a noncontact and label-free means to assess tissue viability, oxygenation, microarchitecture, and molecular content. We present here openSFDI: an open-source guide for building a low-cost, small-footprint, threewavelength SFDI system capable of quantifying μa and μ0 s as well as oxyhemoglobin and deoxyhemoglobin concentrations in biological tissue. The companion website provides a complete parts list along with detailed instructions for assembling the openSFDI system. Aim: We describe the design of openSFDI and report on the accuracy and precision of optical property extractions for three different systems fabricated according to the instructions on the openSFDI website. Approach: Accuracy was assessed by measuring nine tissue-simulating optical phantoms with a physiologically relevant range of μa and μ0 s with the openSFDI systems and a commercial SFDI device. Precision was assessed by repeatedly measuring the same phantom over 1 h. Results: The openSFDI systems had an error of 0 6% in μa and −2 3% in μ0 s, compared to a commercial SFDI system. Bland–Altman analysis revealed the limits of agreement between the two systems to be 0.004 mm−1 for μa and −0.06 to 0.1 mm−1 for μ0 s. The openSFDI system had low drift with an average standard deviation of 0.0007 mm−1 and 0.05 mm−1 in μa and μ0 s, respectively. Conclusion: The openSFDI provides a customizable hardware platform for research groups seeking to utilize SFDI for quantitative diffuse optical imaging., Funding agencies: U.S. Department of Defense (DoD)United States Department of Defense [W81XWH-15-1-0070]; Knut and Alice Wallenberg FoundationKnut & Alice Wallenberg Foundation; European Research Council under the European UnionEuropean Research Council (ERC) [715737]; Fre
- Published
- 2020
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50. Characterization of nanosensitive multifractality in submicron scale tissue morphology and its alteration in tumor progression (Erratum)
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Das, Nandan, primary, Alexandrov, Sergey, additional, Gilligan, Katie E., additional, Dwyer, Róisín M., additional, Saager, Rolf B., additional, Ghosh, Nirmalya, additional, and Leahy, Martin, additional
- Published
- 2021
- Full Text
- View/download PDF
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