303 results on '"Samal SK"'
Search Results
2. Protection Induced in Broiler Chickens following Drinking-Water Delivery of Live Infectious Laryngotracheitis Vaccines against Subsequent Challenge with Recombinant Field Virus
- Author
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Samal, SK, Korsa, MG, Browning, GF, Coppo, MJC, Legione, AR, Gilkerson, JR, Noormohammadi, AH, Vaz, PK, Lee, S-W, Devlin, JM, Hartley, CA, Samal, SK, Korsa, MG, Browning, GF, Coppo, MJC, Legione, AR, Gilkerson, JR, Noormohammadi, AH, Vaz, PK, Lee, S-W, Devlin, JM, and Hartley, CA
- Abstract
Infectious laryngotracheitis virus (ILTV) causes acute upper respiratory tract disease in chickens. Attenuated live ILTV vaccines are often used to help control disease, but these vaccines have well documented limitations, including retention of residual virulence, incomplete protection, transmission of vaccine virus to unvaccinated birds and reversion to high levels of virulence following bird-to-bird passage. Recently, two novel ILTV field strains (class 8 and 9 ILTV viruses) emerged in Australia due to natural recombination between two genotypically distinct commercial ILTV vaccines. These recombinant field strains became dominant field strains in important poultry producing areas. In Victoria, Australia, the recombinant class 9 virus largely displaced the previously predominant class 2 ILTV strain. The ability of ILTV vaccines to protect against challenge with the novel class 9 ILTV strain has not been studied. Here, the protection induced by direct (drinking-water) and indirect (contact) exposure to four different ILTV vaccines against challenge with class 9 ILTV in commercial broilers was studied. The vaccines significantly reduced, but did not prevent, challenge virus replication in vaccinated chickens. Only one vaccine significantly reduced the severity of tracheal pathology after direct drinking-water vaccination. The results indicate that the current vaccines can be used to help control class 9 ILTV, but also indicate that these vaccines have limitations that should be considered when designing and implementing disease control programs.
- Published
- 2015
3. Characterization of 2 aquareovirus proteins
- Author
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Samal, SK, Subramanian, K, Lupiani, B, and Revues Inra, Import
- Subjects
[SDV.IMM] Life Sciences [q-bio]/Immunology ,[SDV.BA] Life Sciences [q-bio]/Animal biology ,[SDV.BA]Life Sciences [q-bio]/Animal biology ,[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology ,[SDV.BC]Life Sciences [q-bio]/Cellular Biology ,[SDV.GEN.GA] Life Sciences [q-bio]/Genetics/Animal genetics ,[SDV.BC.IC] Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB] ,[SDV.BBM.BM] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology ,[SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal genetics ,[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology ,[SDV.SPEE] Life Sciences [q-bio]/Santé publique et épidémiologie ,[SDV.BC.IC]Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB] ,[SDV.IMM]Life Sciences [q-bio]/Immunology ,[SDV.NEU]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC] ,[SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie ,[SDV.NEU] Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC] ,[SDV.BC] Life Sciences [q-bio]/Cellular Biology ,[SDV.MP] Life Sciences [q-bio]/Microbiology and Parasitology ,ComputingMilieux_MISCELLANEOUS - Abstract
International audience
- Published
- 1995
4. A genetic probe for identification of the turbot aquareovirus in infected cell cultures
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Lupiani, B, primary, Subramanian, K, additional, Hetrick, FM, additional, and Samal, SK, additional
- Published
- 1993
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5. Analysis of mixed infection of sheep with bluetongue virus serotypes 10 and 17: evidence for genetic reassortment in the vertebrate host
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Samal Sk, Ramig Rf, McConnell S, and C W Livingston
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Serotype ,Genes, Viral ,Immunology ,Reassortment ,Reoviridae ,Viremia ,Biology ,Microbiology ,Genome ,Bluetongue ,Virus ,Virology ,medicine ,Animals ,Serotyping ,Vero Cells ,Sheep ,Host (biology) ,medicine.disease ,biology.organism_classification ,Insect Science ,Vero cell ,Bluetongue virus ,Research Article - Abstract
Two seronegative sheep were infected intravenously with 10(9) PFU each of bluetongue virus (BTV) serotype 10 and BTV serotype 17. One animal experienced a mild bluetongue-like disease, and both experienced a short-duration viremia and developed neutralizing immune responses to both virus serotypes. Progeny virus was isolated from venous blood from each animal by using conditions in which reassortment could not have occurred during isolation. Electropherotypes were determined for the progeny viruses from the infected sheep, yielding strikingly similar results for the two animals. In both sheep, serotype 10 dominated among the progeny, accounting for 92% of the progeny. Serotype 17 was rarely isolated and accounted for 3% of the progeny analyzed. The remaining 5% of the progeny clones were reassortant and derived genome segments from both serotypes 10 and 17. Analysis of the parental origin of genome segments in the small number of reassortant progeny analyzed suggested that selection of specific genome segments may have occurred in the infected sheep. These data indicate that reassortment of genome segments occurs, at low frequency, in sheep mixedly infected with BTV.
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- 1987
6. Burden of neurologic diseases in BRICS countries (1990 to 2021): an analysis of 2021 Global Burden of Disease Study.
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Chauhan S, Gaidhane S, Priya GP, Sharma P, Bhat M, Sharma S, Kumar MR, Sinha A, Zahiruddin QS, Dev N, Bushi G, Jena D, Shabil M, Sah S, Syed R, Kundra K, Dash A, and Samal SK
- Abstract
Background: Neurological disorders are a major global health concern, especially in BRICS nations (Brazil, Russia, India, China, South Africa), where demographic and socio-economic changes have amplified their impact. This study evaluates trends in incidence, prevalence, mortality, and Disability-Adjusted Life Years (DALYs) associated with neurological diseases in these countries from 1990 to 2021, focusing on sex disparities and key risk factors., Methods: Data were obtained from the Global Burden of Disease (GBD) 2021 database. Join point regression and Estimated Annual Percentage Change (EAPC) analyses were used to assess trends in neurological disease burden. Age-standardized rates for incidence, prevalence, and mortality were calculated, along with DALYs, and key risk factors were analyzed., Results: China showed the largest increase in incidence (7541.89 to 8031.37 per 100,000) and prevalence (26494.85 to 28534.79 per 100,000). Mortality increased in India (21.01 to 24.27 per 100,000) and South Africa (27.66 to 30.65 per 100,000), while China showed a decline (39.59 to 37.30 per 100,000). Brazil experienced a substantial rise in DALYs (1610.65 to 42024.59). Sex disparities showed higher DALY rates for females across all nations., Conclusion: The research highlights the rising burden of neurological disorders in BRICS nations, especially in China and Brazil due to aging populations and metabolic risks. It emphasizes the need for targeted interventions in India and South Africa, where increasing mortality rates and DALYs are concerning. Effective health policies should focus on early detection, managing metabolic risks, and implementing sex-specific strategies to address these issues., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2024 Chauhan, Gaidhane, Priya, Sharma, Bhat, Sharma, Kumar, Sinha, Zahiruddin, Dev, Bushi, Jena, Shabil, Sah, Syed, Kundra, Dash and Samal.)
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- 2024
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7. Evaluation of 1-vinyl-3-alkyl imidazolium-based ionic liquid monomers towards antibacterial activity: An in-silico & in-vitro study.
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Panda I, Raut S, Samal SK, Behera SK, and Pradhan S
- Abstract
In this study 1-vinyl-3-alkyl imidazolium-based ionic liquid monomers (ILs) with different alkyl chain lengths {R = hexyl (A), octyl (B) and decyl (C)} have been synthesized for antibacterial applications. The prepared ILs have been characterized using UV, FT-IR and NMR spectroscopy. The antibacterial activities of the synthesized ILs against Staphylococcus aureus (S. aureus) and Escherichia coli (E. coli) have been examined by measuring their minimal inhibitory concentrations (MICs) and minimum bactericidal concentrations (MBCs). The results exhibit that these ILs have admirable antibacterial activities with MIC values range from < 1.2 to 12.2 μM for S. aureus and < 2.4 to 12.2 μM for E. coli. A notable dependence of antibacterial and antibiofilm efficacy on the alkyl chain length (ILC> ILB > ILA) has been observed. From in-silico evaluation, the binding energies of β-lactamase protein of S. aureus (PDB ID: 1GHP) are found to be -4.4, -4.6, -4.7 kcal/mol for IL A, IL B, and IL C. For dihydrofolate reductase (DHFR) of S. aureus and E. coli the binding energies -4.6, -4.5, -5.3 kcal/mol and -5.3, -5.4, -5.6 kcal/mol have been noted for IL A, IL B, and IL C respectively. MD simulations (100 ns) have been performed to predict the stability and understand the binding mechanism of the docked complexes., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. The authors declare that there is no conflict of interest., (Copyright © 2024 Elsevier Ltd. All rights reserved.)
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- 2024
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8. Alterations in structural components of extracellular polymeric substance of epilithic bacteria Brevundimonas faecalis BC1 growing on monumental rock under thermal stress.
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Samal SK, Sahoo D, and Acharya D
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- Caulobacteraceae physiology, Polysaccharides, Bacterial chemistry, Bacterial Proteins, Heat-Shock Response, Biofilms growth & development, Extracellular Polymeric Substance Matrix chemistry, Hot Temperature
- Abstract
In this study, a comparison of biofilm formation, extracellular polymeric substances (EPS) production, protein and polysaccharides estimation, and protein profiling through SDS-PAGE, FTIR, GC-MS, ESI-MS, SEM, and AFM analysis were done for EPS from epilithic bacteria Brevundimonas faecalis BC1 obtained from monumental rock under normal room temperature and heat stressed condition. Heat stress (60 ± 2 °C) that simulates hot monumental rock surfaces during the summer season caused bacteria BC1 to produce more EPS (8.56 g/L), biofilm, protein and polysaccharides, extra SDS-PAGE protein bands of different molecular weight than their control counterpart. FTIR and GC-MS analysis showed extra polysaccharide formation in the EPS under heat stress and ESI-MS analysis clearly showed differences in structural components of EPS from two different sources. Consistently, SEM and AFM showed more branching structural components with dentate spikes in the EPS obtained from a heat-stressed source than from its counterpart, suggesting their protective role toward heat stress and adhesive potential for biofilm.
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- 2024
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9. SnS/MnSe heterostructures for enhanced optoelectronics and dielectric applications.
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Parida A, Samal SK, Chinnaiah S, and Naik R
- Abstract
In this work, we synthesized SnS and MnSe compositions using a hydrothermal method and then prepared the SnS/MnSe heterostructure. By using X-ray diffraction, the structural characteristics of these compounds were examined. It was discovered that both the pure phases MnSe and SnS appeared in the SnS/MnSe sample, confirming the heterostructure formation. The Raman analysis also confirmed the formation of a heterostructure of the SnS/MnSe sample containing two phases, MnSe and SnS. The individual MnSe and SnS compositions show good optical properties, having bandgap values around 1.3 and 1 eV, respectively, whereas the prepared heterostructure shows a very low bandgap value of around 0.4 eV. The SnS sample shows nano sheet-like morphology, and MnSe shows rectangular-like shapes, whereas the SnS/MnSe heterostructure shows the presence of both shapes. The EDX study shows all the constituent elements in the SnS/MnSe heterostructure sample. The electrical study also shows that the properties of the prepared heterostructure are different from those of pure compositions. Investigating the dielectric characteristics with respect to temperature and frequency allowed for a thorough analysis of several parameters, including the electric modulus, dielectric constant, AC conductivity, and impedance spectroscopy. Applications for electronic and energy storage devices may benefit from the aforementioned optical, electrical, and dielectric characteristics of the SnS/MnSe heterostructure., Competing Interests: The authors declare no competing financial interest., (This journal is © The Royal Society of Chemistry.)
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- 2024
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10. Metaproteomic analysis from cervical biopsies and cytologies identifies proteinaceous biomarkers representing both human and microbial species.
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Faktor J, Henek T, Hernychova L, Singh A, Vojtesek B, Polom J, Bhatia R, Polom K, Cuschieri K, Cruickshank M, Gurumurthy M, Goodlett DR, Al Shboul S, Samal SK, Hupp T, Kalampokas E, and Kote S
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- Humans, Female, Biopsy, Uterine Cervical Neoplasms pathology, Uterine Cervical Neoplasms microbiology, Lactobacillus, Galectin 1 metabolism, Galectin 1 analysis, Galectin 1 genetics, Lumican, Adult, Microbiota, Proteomics methods, Cervix Uteri microbiology, Cervix Uteri pathology, Biomarkers analysis, Biomarkers metabolism
- Abstract
The detection of HPV infection and microbial colonization in cervical lesions is currently done through PCR-based viral or bacterial DNA amplification. Our objective was to develop a methodology to expand the metaproteomic landscape of cervical disease and determine if protein biomarkers from both human and microbes could be detected in distinct cervical samples. This would lead to the development of multi-species proteomics, which includes protein-based lateral flow diagnostics that can define patterns of microbes and/or human proteins relevant to disease status. In this study, we collected both non-frozen tissue biopsy and exfoliative non-fixed cytology samples to assess the consistency of detecting human proteomic signatures between the cytology and biopsy samples. Our results show that proteomics using biopsies or cytologies can detect both human and microbial organisms. Across patients, Lumican and Galectin-1 were most highly expressed human proteins in the tissue biopsy, whilst IL-36 and IL-1RA were most highly expressed human proteins in the cytology. We also used mass spectrometry to assess microbial proteomes known to reside based on prior 16S rRNA gene signatures. Lactobacillus spp. was the most highly expressed proteome in patient samples and specific abundant Lactobacillus proteins were identified. These methodological approaches can be used in future metaproteomic clinical studies to interrogate the vaginal human and microbiome structure and metabolic diversity in cytologies or biopsies from the same patients who have pre-invasive cervical intraepithelial neoplasia, invasive cervical cancer, as well as in healthy controls to assess how human and pathogenic proteins may correlate with disease presence and severity., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024. Published by Elsevier B.V.)
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- 2024
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11. Sr 2 BiF 7 : A New Bismuth-Based Host Material for Lanthanide Ions Doping: Synthesis, Downshifting, and Upconversion Luminescence Properties for Multimode Anticounterfeiting.
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Yadav J, Pushpendra, Samal SK, Achary SN, and Naidu BS
- Abstract
A new bismuth-based host material, i.e., Sr
2 BiF7 , is explored in this work. Undoped and lanthanide ion-doped Sr2 BiF7 nanomaterials are prepared using a simple coprecipitation technique at 120 °C. The undoped nanomaterials exhibit a blue color under 365 nm excitation. The downshifting and upconversion photoluminescent properties of Er and Yb codoped Sr2 BiF7 nanomaterials are investigated. The optimum up-conversion luminescence is produced by nanomaterials doped with 5% Yb3+ and 0.2% Er3+ . These nanomaterials show blue and magenta colors upon excitation at 365 and 395 nm wavelengths, respectively. Sr2 BiF7 material doped with Er3+ shows green emission, while the codoped Er3+ , Yb3+ nanomaterials exhibit an orange-red color under 980 nm light. A specific amount of polyvinyl chloride (PVC) is used for producing luminescent ink with these nanoparticles for multimode anticounterfeiting applications. The letters and patterns written with luminescent ink based on Er3+ , Yb3+ doped nanomaterials show blue, magenta, and orange-red colors under 365, 395, and 980 nm light, respectively. These results establish that this material can be effectively used as a multimode photoluminescent covert tag to combat counterfeiting.- Published
- 2024
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12. Bacteriophage as a potential biotherapeutics to combat present-day crisis of multi-drug resistant pathogens.
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Pattnaik A, Pati S, and Samal SK
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The rise of Multi-Drug Resistant (MDR) bacterial pathogens to most, if not all, currently available antibacterial agents has become a global threat. As a consequence of the antibiotic resistance epidemic, phage therapy has emerged as a potential alternative to conventional antibiotics. Despite the high therapeutic advantages of phage therapy, they have not yet been successfully used in the clinic due to various limitations of narrow host specificity compared to antibiotics, poor adhesion on biofilm surface, and susceptibility to both human and bacterial defences. This review focuses on the antibacterial effect of bacteriophage and their recent clinical trials with a special emphasis on the underlying mechanism of lytic phage action with the help of endolysin and holin. Furthermore, recent clinical trials of natural and modified endolysins and some marketed products have also been emphasized with future prospective., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2024 Published by Elsevier Ltd.)
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- 2024
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13. Revitalizing elixir with orange peel amplification of alginate fish oil beads for enhanced anti-aging efficacy.
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Dhasmana A, Preetam S, Malik S, Jadon VS, Joshi N, Bhandari G, Gupta S, Mishra R, Rustagi S, and Samal SK
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- Anti-Inflammatory Agents pharmacology, Anti-Inflammatory Agents chemistry, Humans, Aging drug effects, Animals, Plant Extracts chemistry, Plant Extracts pharmacology, Microspheres, Mice, Alginates chemistry, Fish Oils chemistry, Hydrogels chemistry, Antioxidants pharmacology, Antioxidants chemistry
- Abstract
The research introduces a novel method for creating drug-loaded hydrogel beads that target anti-aging, anti-oxidative, and anti-inflammatory effects, addressing the interconnected processes underlying various pathological conditions. The study focuses on the development of hydrogel beads containing anti-aging compounds, antioxidants, and anti-inflammatory drugs to effectively mitigate various processes. The synthesis, characterization and in vitro evaluations, and potential applications of these multifunctional hydrogel beads are discussed. A polymeric alginate-orange peel extract (1:1) hydrogel was synthesized for encapsulating fish oil. Beads prepared with variable fish oil concentrations (0.1, 0.3, and 0.5 ml) were characterized, showing no significant decrease in size i.e., 0.5 mm and a reduction in pore size from 23 to 12 µm. Encapsulation efficiency reached up to 98% within 2 min, with controlled release achieved upto 45 to 120 min with increasing oil concentration, indicating potential for sustained delivery. Fourier-transform infrared spectroscopy confirmed successful encapsulation by revealing peak shifting, interaction between constituents. In vitro degradation studies showed the hydrogel's biodegradability improved from 30 to 120 min, alongside anti-inflammatory, anti-oxidative, anti-collagenase and anti-elastase activities, cell proliferation rate enhanced after entrapping fish oil. In conclusion, the synthesized hydrogel beads are a promising drug delivery vehicle because they provide stable and effective oil encapsulation with controlled release for notable anti-aging and regenerative potential. Targeted delivery for inflammatory and oxidative stress-related illnesses is one set of potential uses. Further research may optimize this system for broader applications in drug delivery and tissue engineering., (© 2024. The Author(s).)
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- 2024
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14. Perilous paradigm of graphene oxide and its derivatives in biomedical applications: Insight to immunocompatibility.
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Ayreen Z, Khatoon U, Kirti A, Sinha A, Gupta A, Lenka SS, Yadav A, Mohanty R, Naser SS, Mishra R, Chouhan RS, Samal SK, Kaushik NK, Singh D, Suar M, and Verma SK
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- Humans, Animals, Nanoparticles, Immune System drug effects, Graphite toxicity, Graphite chemistry
- Abstract
With advancements in nanotechnology and innovative materials, Graphene Oxide nanoparticles (GONP) have attracted lots of attention among the diverse types of nanomaterials owing to their distinctive physicochemical characteristics. However, the usage at scientific and industrial level has also raised concern to their toxicological interaction with biological system. Understanding these interactions is crucial for developing guidelines and recommendations for applications of GONP in various sectors, like biomedicine and environmental technologies. This review offers crucial insights and an in-depth analysis to the biological processes associated with GONP immunotoxicity with multiple cell lines including human whole blood cultures, dendritic cells, macrophages, and multiple cancer cell lines. The complicated interactions between graphene oxide nanoparticles and the immune system, are highlighted in this work, which reveals a range of immunotoxic consequences like inflammation, immunosuppression, immunostimulation, hypersensitivity, autoimmunity, and cellular malfunction. Moreover, the immunotoxic effects are also highlighted with respect to in vivo models like mice and zebrafish, insighting GO Nanoparticles' cytotoxicity. The study provides invaluable review for researchers, policymakers, and industrialist to understand and exploit the beneficial applications of GONP with a controlled measure to human health and the environment., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper, (Copyright © 2024 The Authors. Published by Elsevier Masson SAS.. All rights reserved.)
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- 2024
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15. Er 3+ -activated Ba 2 V 2 O 7 upconversion nanosheets for dual-mode temperature sensing.
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Samal SK, Kulkarni S, Yadav J, and Naidu BS
- Abstract
So far, there has been substantial research on non-contact luminescence thermometry approaches that rely on luminescence intensity ratio (LIR) technology. However, there is limited availability of phosphors doped with Er
3+ ions that exhibit on-par luminescence and high sensitivity. In this work, samples of Ba2 V2 O7 :Er3+ were synthesized using a sol-gel method aided by citric acid. The luminescence properties of these samples, including upconversion and down-shifting, were investigated using both ultraviolet and 980 nm laser stimulation. When subjected to ultraviolet (UV) light, the sample exhibits a distinct broadband emission that appears pale green. This emission is a distinguishing property of the sample and is attributed to the presence of V2 O7 2- ions. Upon being stimulated by a 980 nm laser, the sample exhibits standard green up-conversion Er3+ emission bands. Concurrently, an assessment was conducted on the phosphor's ability to measure temperature by analysing the LIR between the thermally coupled2 H11/2 ,4 S3/2 energy levels (TCELs) and the non-thermally coupled2 H11/2 ,4 F9/2 energy levels (NTCELs) of the Er3+ ion. The corresponding highest sensitivity of temperature for TCELs and NTCELs can position Ba2 V2 O7 :Er3+ nanosheets as a capable option for materials utilized in temperature-sensing applications.- Published
- 2024
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16. Rapid microwave-assisted synthesis and characterization of a novel CuCoTe nanocomposite material for optoelectronic and dielectric applications.
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Supriya S, Das S, Samal SK, Senapati S, and Naik R
- Abstract
In the realm of nanomaterial research, copper telluride and cobalt telluride have individually attracted considerable attention owing to their unique properties and potential applications. However, there exists a notable gap in the literature when it comes to the exploration of composite materials derived from these elements. From this point of view, a ternary CuCoTe nanocomposite was prepared using the microwave synthesis method. Various characterizations were performed by varying the power and irradiation time. X-Ray diffraction study and transmission electron microscopy analysis confirmed the polycrystalline nature of the material with Cu
2 Te and CoTe hexagonal phases. Field emission scanning electron microscopy images reveal nanoparticle-like morphology, which remains unchanged even when the time of irradiation increases. In addition, the nanoparticle size of the material lies in the range of 30-39 nm. The differential scanning calorimetry inferred various exothermic and endothermic peaks. Meanwhile, the optical analysis from the UV-visible study shows the red-shifted absorbance, enabling the material for semiconductor and photovoltaic devices. Furthermore, the optical bandgap of the material varies in the range from 2.45 to 3.61 eV, which reveals the tuneable bandgap desiring the material for various optoelectronic applications. The frequency-temperature-dependent dielectric study gives results for dielectric parameters, conductivity, and impedance behaviour. The material's dielectric constant, dielectric loss, and AC conductivity enhance with the increase in temperature. This behaviour of the material broadens the area of applicability in energy storage devices.- Published
- 2024
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17. The effect of 5' and 3' non-translated regions on the expression of a transgene from a Newcastle disease virus vector.
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Chowdhury IR, Viktorova E, Samal SK, and Belov GA
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- Animals, Humans, Newcastle disease virus genetics, HeLa Cells, RNA, Messenger genetics, RNA, Messenger metabolism, 3' Untranslated Regions, Transgenes, Chickens, Vaccines metabolism, Newcastle Disease genetics, Viral Vaccines
- Abstract
Newcastle disease virus (NDV) is an avian virus and a promising vector for the development of vaccines for veterinary and human use. The optimal vaccine vector performance requires a stable high-level expression of a transgene. The foreign genes are usually incorporated in the genome of NDV as individual transcription units, whose transcription and subsequent translation of the mRNA are regulated by the 5' and 3' untranslated regions (UTRs) flanking the open reading frame of the transgene. Here, we investigated if the UTRs derived from the cognate NDV genes would increase the expression of a model protective antigene from an NDV vector. Our results show that in chicken DF1 cells, none of the UTRs tested significantly outperformed generic short sequences flanking the transgene, while in human HeLa cells, UTRs derived from the M gene of NDV statistically significantly increased the expression of the transgene. The UTRs derived from the HN gene significantly downregulated the transgene expression in both cell cultures. Further experiments demonstrated that NDV UTRs differently affect the mRNA abundance and translation efficacy. While both M and HN UTRs decreased the level of the transgene mRNA in infected cells compared to the mRNA flanked by generic UTRs, M, and particularly, HN UTRs strongly increased the mRNA translation efficacy. The major determinants of translation enhancement are localized in the 5'UTR of HN. Thus, our data reveal a direct role of NDV UTRs in translational regulation, and inform future optimization of NDV vectors for vaccine and therapeutic use., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024. Published by Elsevier B.V.)
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- 2024
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18. The posterity of Zebrafish in paradigm of in vivo molecular toxicological profiling.
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Verma SK, Nandi A, Sinha A, Patel P, Mohanty S, Jha E, Jena S, Kumari P, Ghosh A, Jerman I, Chouhan RS, Dutt A, Samal SK, Mishra YK, Varma RS, Panda PK, Kaushik NK, Singh D, and Suar M
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- Animals, Humans, Models, Animal, Liver, Mammals, Zebrafish, Nanostructures
- Abstract
The aggrandised advancement in utility of advanced day-to-day materials and nanomaterials has raised serious concern on their biocompatibility with human and other biotic members. In last few decades, understanding of toxicity of these materials has been given the centre stage of research using many in vitro and in vivo models. Zebrafish (Danio rerio), a freshwater fish and a member of the minnow family has garnered much attention due to its distinct features, which make it an important and frequently used animal model in various fields of embryology and toxicological studies. Given that fertilization and development of zebrafish eggs take place externally, they serve as an excellent model organism for studying early developmental stages. Moreover, zebrafish possess a comparable genetic composition to humans and share almost 70% of their genes with mammals. This particular model organism has become increasingly popular, especially for developmental research. Moreover, it serves as a link between in vitro studies and in vivo analysis in mammals. It is an appealing choice for vertebrate research, when employing high-throughput methods, due to their small size, swift development, and relatively affordable laboratory setup. This small vertebrate has enhanced comprehension of pathobiology and drug toxicity. This review emphasizes on the recent developments in toxicity screening and assays, and the new insights gained about the toxicity of drugs through these assays. Specifically, the cardio, neural, and, hepatic toxicology studies inferred by applications of nanoparticles have been highlighted., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier Masson SAS.. All rights reserved.)
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- 2024
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19. Isolation and Enrichment of Major Primary Neuroglial Cells from Neonatal Mouse Brain.
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Samal SK, Sharma M, and Sarma JD
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The central nervous system (CNS) relies on the complex interaction of neuroglial cells to carry out vital physiological functions. To comprehensively understand the structural and functional interplay between these neuroglial cells, it is essential to establish an appropriate in vitro system that can be utilized for thorough investigation. Traditional protocols for establishing primary neuronal and mixed glial cultures from prenatal mice or neural stem cells require sacrificing pregnant mice and have the drawback of yielding only specific types of cells. Our current protocol overcomes these drawbacks by utilizing the brain from day-0 pups to isolate CNS resident neuroglial cells including astrocytes, microglia, oligodendrocytes [oligodendrocyte precursor cells (OPCs) and differentiated oligodendrocytes], and meningeal fibroblasts, as well as hippocampal neurons, avoiding sacrificing pregnant mice, which makes this procedure efficient and cost effective. Furthermore, through this protocol, we aim to provide step-by-step instructions for isolating and establishing different primary neuroglial cells and their characterization using cell-specific markers. This study presents an opportunity to isolate, culture, and establish all major CNS resident cells individually. These cells can be utilized in various cell-based and biochemical assays to comprehensively investigate the cell-specific roles and behaviors of brain resident cells in a reductionist approach. Key features • Efficient isolation of major neuroglial cells like meningeal fibroblasts, neurons, astrocytes, oligodendrocytes, and microglia from a single day-0 neonatal mouse pup's brain. • Circumvents the sacrifice of pregnant female mice. • Acts as a bridging experimental method between secondary cell lines and in vivo systems. • Isolated cells can be used for performing various cell-based and biochemical assays., Competing Interests: Competing interestsThe authors declare no competing interests., (©Copyright : © 2024 The Authors; This is an open access article under the CC BY-NC license.)
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- 2024
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20. Experimental and in silico insights: interaction of dimethyl sulphoxide with 1-hexyl-2-methyl imidazolium bromide/1-octyl-2-methyl imidazolium bromide at different temperatures.
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Panda I, Behera BR, Jena D, Behera SK, Samal SK, and Pradhan S
- Abstract
Ionic liquids have gained attention as 'designer solvents' since they offer a broad spectrum of properties that can be tuned by altering the constituent ions. In this work, 1-alkyl-2-methyl imidazolium-based ionic liquids with two different alkyl chains (alkyl = hexyl and octyl) have been synthesized and characterized. Since the binary mixture of ionic liquids with molecular solvents can give rise to striking physicochemical properties, the interaction of the synthesized room temperature ionic liquids, 1-hexyl-2-methyl imidazolium bromide [HMIM][Br]/1-octyl-2-methyl imidazolium bromide [OMIM][Br] with DMSO has been examined through density and specific conductance at T = (303.15, 308.15, 313.15 and 318.15) K under atmospheric pressure. The obtained molar volume and excess molar volume are fitted to the Redlich-Kister polynomial equation, and the standard deviation is noted. The positive excess molar volume at elevated temperatures indicates volume expansion due to the mutual loss of dipolar association and differences in the sizes and shapes of the constituent molecules. To have a better understanding of the reactivity and efficacy of 1-hexyl-2-methyl imidazolium bromide and 1-octyl-2-methyl imidazolium bromide with DMSO, the Becke, 3-parameter, Lee-Yang-Parr (B3LYP) correlation function of density functional theory (DFT) has been used. The ORCA Program version 4.0 calculates the highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) energy. The effective reactivities of both the compounds that showed an energy band gap (Δ E ), i.e. , the difference between E
LUMO and EHOMO , are 7.147 and 8.037 kcal mol-1 ., Competing Interests: The authors have no conflicts of interest to declare., (This journal is © The Royal Society of Chemistry.)- Published
- 2024
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21. Facile fabrication of plasmonic Ag/ZIF-8: an efficient catalyst for investigation of antibacterial, haemolytic and photocatalytic degradation of antibiotics.
- Author
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Subhadarshini A, Samal SK, Pattnaik A, and Nanda B
- Abstract
Present article represents the fabrication of plasmonic Ag/ZIF-8 composite and its effect on antibacterial, haemolytic and photocatalytic degradation of antibiotics. Ag/ZIF-8 was prepared by varying molar concentrations (1 mM, 2.5 mM, and 5 mM) of AgNO
3 into ZIF-8 using NaBH4 as a reducing agent by the sol-gel process. The material was then characterised using the XRD, XPS, FTIR, SEM, HRTEM, UVDRS, BET and EIS techniques. When it comes to breaking down the antibiotic CIP, the optimised Ag2.5/ZIF-8 exhibits the strongest photocatalytic capability, with a degradation efficiency of 82.3% after 90 minutes. Due to LSPR (Localised Surface Plasmon Resonance) as well as the efficient movement and separation of the interfaces of photo-generated charge carriers in Ag2.5/ZIF-8 may be the causes of this increase in photocatalytic degradation. The effect of several parameters, such as pH, a variety of catalysts, varying dose concentrations, scavenging and sustainability are being investigated. The para benzoquinone (OH˙) and citric acid (h+ ) the primary active species in the photocatalytic breakdown pathway, according to trapping study. Whereas, Ag5/ZIF-8 was optimised for greater antibacterial activity against S. aureus and E. coli due to the synergistic impact of Ag+ and Zn2+ in Ag5/ZIF-8 and in haemolytic experiment, all samples were discovered to be non-toxic to blood cells. Overall, the synthesised compound was discovered to be a reusable, affordable catalyst for water remediation that can also be used in biomedicine., Competing Interests: There are no conflicts to declare., (This journal is © The Royal Society of Chemistry.)- Published
- 2023
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22. Advancement in Biopolymer Assisted Cancer Theranostics.
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Bhattacharya T, Preetam S, Ghosh B, Chakrabarti T, Chakrabarti P, Samal SK, and Thorat N
- Subjects
- Humans, Drug Delivery Systems, Nanotechnology, Biopolymers therapeutic use, Precision Medicine, Neoplasms diagnosis, Neoplasms drug therapy
- Abstract
Applications of nanotechnology have increased the importance of research and nanocarriers, which have revolutionized the method of drug delivery to treat several diseases, including cancer, in the past few years. Cancer, one of the world's fatal diseases, has drawn scientists' attention for its multidrug resistance to various chemotherapeutic drugs. To minimize the side effects of chemotherapeutic agents on healthy cells and to develop technological advancement in drug delivery systems, scientists have developed an alternative approach to delivering chemotherapeutic drugs at the targeted site by integrating it inside the nanocarriers like synthetic polymers, nanotubes, micelles, dendrimers, magnetic nanoparticles, quantum dots (QDs), lipid nanoparticles, nano-biopolymeric substances, etc., which has shown promising results in both preclinical and clinical trials of cancer management. Besides that, nanocarriers, especially biopolymeric nanoparticles, have received much attention from researchers due to their cost-effectiveness, biodegradability, treatment efficacy, and ability to target drug delivery by crossing the blood-brain barrier. This review emphasizes the fabrication processes, the therapeutic and theragnostic applications, and the importance of different biopolymeric nanocarriers in targeting cancer both in vitro and in vivo , which conclude with the challenges and opportunities of future exploration using biopolymeric nanocarriers in onco-therapy with improved availability and reduced toxicity.
- Published
- 2023
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23. Additive Manufacturing of Wet-Spun Polysulfone Medical Implants.
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Puppi D, Braccini S, Battisti A, Manariti A, Pecorini G, and Samal SK
- Subjects
- Animals, Mice, Cell Line, Polymers, Prostheses and Implants, Biomedical Engineering
- Abstract
Research on additive manufacturing (AM) of high-performance polymers provides novel materials and technologies for advanced applications in different sectors, such as aerospace and biomedical engineering. The present article is contextualized in this research trend by describing a novel AM protocol for processing a polysulfone (PSU)/ N -methyl-2-pyrrolidone (NMP) solution into medical implant prototypes. In particular, an AM technique involving the patterned deposition of the PSU/NMP mixture in a coagulation bath was employed to fabricate PSU implants with different predefined shape, fiber diameter, and macropore size. Scanning electron microscopy (SEM) analysis highlighted a fiber transversal cross-section morphology characterized by a dense external skin layer and an inner macroporous/microporous structure, as a consequence of the nonsolvent-induced polymer solidification process. Physical-chemical and thermal characterization of the fabricated samples demonstrated that PSU processing did not affect its macromolecular structure and glass-transition temperature, as well as that after post-processing PSU implants did not contain residual solvent or nonsolvent. Mechanical characterization showed that the developed PSU scaffold tensile and compressive modulus could be changed by varying the macroporous architecture. In addition, PSU scaffolds supported the in vitro adhesion and proliferation of the BALB/3T3 clone A31 mouse embryo cell line. These findings encourage further research on the suitability of the developed processing method for the fabrication of customized PSU implants.
- Published
- 2023
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24. Antibodies against malondialdehyde among 60-year-olds: prediction of cardiovascular disease.
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Samal SK, Leander K, Vikström M, Griesbaum L, de Faire U, and Frostegård J
- Subjects
- Male, Female, Humans, Middle Aged, Malondialdehyde, Immunoglobulin G, Angina Pectoris, Cardiovascular Diseases epidemiology, Diabetes Mellitus, Type 2, Myocardial Infarction epidemiology
- Abstract
Malondialdehyde (MDA) is generated in oxidized LDL. It forms covalent protein adducts, and is recognized by antibodies (anti-MDA). We previously studied IgM anti-MDA, and here we focus on IgG, IgG1 and IgG2 anti-MDA in predicting cardiovascular disease (CVD). We determined, by ELISA, anti-MDA in a 7-year follow-up of 60-year-old men and women from Stockholm County (2039 men, 2193 women). We identified 210 incident CVD cases (defined as new events of myocardial infarction (MI), and hospitalization for angina pectoris) and ischemic stroke, and 620 age- and sex-matched controls. IgG anti-MDA was not associated with CVD. Median values only differed significantly for IgG1 anti-MDA among men, with lower levels among cases than controls (p = 0.039). High IgG1 anti-MDA (above 75th percentile) was inversely associated with CVD risk after adjustment for smoking, body mass index, type 2 diabetes, hyperlipidemia, and hypertension, (OR and 95% CI: 0.59; 0.40-0.89). After stratification by sex, this association emerged in men (OR and 95% CI: 0.46; 0.27-0.77), but not in women. IgG2 anti-MDA were associated with protection in the whole group and among men though weaker than IgG1 anti-MDA. IgG2 anti-MDA above the 75th percentile was associated with an increased risk of MI/angina in women (OR and 95% CI: 2.57; (1.08-6.16)). IgG1 and less so IgG2 anti-MDA are protection markers for CVD and MI/angina in the whole group and among men. However, IgG2 anti-MDA was a risk marker for MI/angina among women. These findings could have implications for both prediction and therapy., (© 2023. Springer Nature Limited.)
- Published
- 2023
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25. Effect of sludge amelioration on yield, accumulation and translocation of heavy metals in soybean grown in acid and alkaline soils.
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Choudhary M, Datta SP, Golui D, Meena MC, Nogiya M, Samal SK, Raza MB, Rahman MM, and Mishra R
- Subjects
- Soil, Sewage, Glycine max, Lead, Plants, Soil Pollutants analysis, Metals, Heavy analysis
- Abstract
A greenhouse pot experiment was conducted with seven different levels of sludge (0, 5, 10, 20, 40, 80, 160 g kg
-1 ) to assess the potential impact of sludge application on soybean (Glycine max (L.) Merr.) productivity, metal accumulation and translocation, and physico-chemical changes in acid and alkaline soils. The outcomes revealed that the application of sludge @ 5.0 to 160 g kg-1 resulted in a significant (p < 0.05) increase in seed and straw yield in both acid and alkaline soils compared to control. All the assessed heavy metals in soybean were within permissible ranges and did not exceed the phytotoxic limit, except for Fe, Zn, and Cu in the roots from the application of sewage sludge. The values of bioaccumulation factor (BFroot/soil ) and translocation factor i.e., TFstraw/root and TFseed/straw were < 1.0 for Ni, Pb and Cr. Overall, for all the sludge application doses the soil pH was observed to increase in the acid soil and decline in alkaline soil when compared to the control. All the investigated heavy metals (Fe, Mn, Zn, Cu, Ni, Cd, Pb, and Cr) in the different plant tissues (root, straw and seed) of soybean were correlated with the soil variables. The study finds that sludge can be a potential organic fertilizer and function as an eco-friendly technique for the recycling of nutrients in the soil while keeping a check on the heavy metals' availability to plants., (© 2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)- Published
- 2023
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26. Biosensing Systems Based on Graphene Oxide Fluorescence Quenching Effect.
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Battisti A, Samal SK, and Puppi D
- Abstract
Graphene oxide (GO) is a versatile material obtained by the strong oxidation of graphite. Among its peculiar properties, there is the outstanding ability to significantly alter the fluorescence of many common fluorophores and dyes. This property has been exploited in the design of novel switch-ON and switch-OFF fluorescence biosensing platforms for the detection of a plethora of biomolecules, especially pathological biomarkers and environmental contaminants. Currently, novel advanced strategies are being developed for therapeutic, diagnostic and theranostic approaches to widespread pathologies caused by viral or bacterial agents, as well as to cancer. This work illustrates an overview of the most recent applications of GO-based sensing systems relying on its fluorescence quenching effect.
- Published
- 2023
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27. Designing of gradient scaffolds and their applications in tissue regeneration.
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Pattnaik A, Sanket AS, Pradhan S, Sahoo R, Das S, Pany S, Douglas TEL, Dandela R, Liu Q, Rajadas J, Pati S, De Smedt SC, Braeckmans K, and Samal SK
- Subjects
- Biocompatible Materials chemistry, Cartilage physiology, Porosity, Bone Regeneration, Tissue Scaffolds chemistry, Tissue Engineering methods
- Abstract
Gradient scaffolds are isotropic/anisotropic three-dimensional structures with gradual transitions in geometry, density, porosity, stiffness, etc., that mimic the biological extracellular matrix. The gradient structures in biological tissues play a major role in various functional and metabolic activities in the body. The designing of gradients in the scaffold can overcome the current challenges in the clinic compared to conventional scaffolds by exhibiting excellent penetration capacity for nutrients & cells, increased cellular adhesion, cell viability & differentiation, improved mechanical stability, and biocompatibility. In this review, the recent advancements in designing gradient scaffolds with desired biomimetic properties, and their implication in tissue regeneration applications have been briefly explained. Furthermore, the gradients in native tissues such as bone, cartilage, neuron, cardiovascular, skin and their specific utility in tissue regeneration have been discussed in detail. The insights from such advances using gradient-based scaffolds can widen the horizon for using gradient biomaterials in tissue regeneration applications., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper, (Copyright © 2023 Elsevier Ltd. All rights reserved.)
- Published
- 2023
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28. Phytoextraction of nickel, lead, and chromium from contaminated soil using sunflower, marigold, and spinach: comparison of efficiency and fractionation study.
- Author
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Samal SK, Datta SP, Dwivedi BS, Meena MC, Nogiya M, Choudhary M, Golui D, and Raza MB
- Subjects
- Humans, Nickel analysis, Chromium metabolism, Spinacia oleracea metabolism, Lead metabolism, Calcium Sulfate, Biodegradation, Environmental, Soil, Plants metabolism, Helianthus, Metals, Heavy analysis, Calendula metabolism, Soil Pollutants analysis
- Abstract
Heavy metals in soil pose a serious threat through their toxic effect on the human food chain. Phytoremediation is a clean and green potentially cost-effective technology in remediating the heavy metal-contaminated soil. However, the efficiency of phytoextraction is very often limited by low phytoavailability of heavy metals in soil, slow growth, and small biomass production of hyper-accumulator plants. To solve these issues, accumulator plant(s) with high biomass production and amendment(s) which can solubilize metals in soil is required for better phytoextraction. A pot experiment was conducted to assess the efficiency of phytoextraction of sunflower, marigold, and spinach as affected by the incorporation of Sesbania (solubilizer) and addition of gypsum (solubilizer) in nickel (Ni)-, lead (Pb)-, and chromium (Cr)-contaminated soil. A fractionation study was conducted to study the bioavailability of the heavy metals in contaminated soil after growing the accumulator plants and as affected by using soil amendments (Sesbania and gypsum). Results showed that marigold was the most efficient among the three accumulator plants in phytoextraction of the heavy metals in the contaminated soil. Both sunflower and marigold were able to reduce the bioavailability of the heavy metals in the post-harvest soil, which was reflected in their (heavy metals) lower concentration in subsequently grown paddy crop (straw). The fractionation study revealed that carbonate and organically bound fractions of the heavy metals control the bioavailability of the heavy metals in the experimental soil. Both Sesbania and gypsum were not effective in solubilizing the heavy metals in the experimental soil. Therefore, the possibility of using Sesbania and gypsum for solubilizing heavy metals in contaminated soil is ruled out., (© 2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
- Published
- 2023
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29. Emerging Trends in Advanced Translational Applications of Silver Nanoparticles: A Progressing Dawn of Nanotechnology.
- Author
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Husain S, Nandi A, Simnani FZ, Saha U, Ghosh A, Sinha A, Sahay A, Samal SK, Panda PK, and Verma SK
- Abstract
Nanoscience has emerged as a fascinating field of science, with its implementation in multiple applications in the form of nanotechnology. Nanotechnology has recently been more impactful in diverse sectors such as the pharmaceutical industry, agriculture sector, and food market. The peculiar properties which make nanoparticles as an asset are their large surface area and their size, which ranges between 1 and 100 nanometers (nm). Various technologies, such as chemical and biological processes, are being used to synthesize nanoparticles. The green chemistry route has become extremely popular due to its use in the synthesis of nanoparticles. Nanomaterials are versatile and impactful in different day to day applications, resulting in their increased utilization and distribution in human cells, tissues, and organs. Owing to the deployment of nanoparticles at a high demand, the need to produce nanoparticles has raised concerns regarding environmentally friendly processes. These processes are meant to produce nanomaterials with improved physiochemical properties that can have significant uses in the fields of medicine, physics, and biochemistry. Among a plethora of nanomaterials, silver nanoparticles have emerged as the most investigated and used nanoparticle. Silver nanoparticles (AgNPs) have become vital entities of study due to their distinctive properties which the scientific society aims to investigate the uses of. The current review addresses the modern expansion of AgNP synthesis, characterization, and mechanism, as well as global applications of AgNPs and their limitations.
- Published
- 2023
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30. Solitary Neurofibroma of Mandible in a 2-Year-Old Child: A Rare Case Report and Review of Literature.
- Author
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Sarkar DF, Mishra N, Pati D, and Samal SK
- Abstract
Solitary intraosseous neurofibromas of mandible are very rare and only 40 cases are documented. This case report presents one of the youngest documented case of solitary neurofibroma of mandible, in a 2-years old male child. The tumour was symptomatic and presented as a swelling over right posterior region of mandible. The patient underwent conservative excision under general anaesthesia. The inferior alveolar nerve was preserved. Histopathology was suggestive of benign nerve sheath tumour. Immunohistochemistry showed moderate S-100 and strong CD34 positivity. Postoperative healing was uneventful. This report also reviews forty previously reported cases of solitary intraosseous neurofibromas of the mandible., (© The Association of Oral and Maxillofacial Surgeons of India 2021.)
- Published
- 2022
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31. Chitosan-Polyphenol Conjugates for Human Health.
- Author
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Pattnaik A, Pati S, and Samal SK
- Abstract
Human health deteriorates due to the generation and accumulation of free radicals that induce oxidative stress, damaging proteins, lipids, and nucleic acids; this has become the leading cause of many deadly diseases such as cardiovascular, cancer, neurodegenerative, diabetes, and inflammation. Naturally occurring polyphenols have tremendous therapeutic potential, but their short biological half-life and rapid metabolism limit their use. Recent advancements in polymer science have provided numerous varieties of natural and synthetic polymers. Chitosan is widely used due to its biomimetic properties which include biodegradability, biocompatibility, inherent antimicrobial activity, and antioxidant properties. However, due to low solubility in water and the non-availability of the H-atom donor, the practical use of chitosan as an antioxidant is limited. Therefore, chitosan has been conjugated with polyphenols to overcome the limitations of both chitosan and polyphenol, along with increasing the potential synergistic effects of their combination for therapeutic applications. Though many methods have been evolved to conjugate chitosan with polyphenol through activated ester-modification, enzyme-mediated, and free radical induced are the most widely used strategies. The therapeutic efficiency of chitosan-polyphenol conjugates has been investigated for various disease treatments caused by ROS that have shown favorable outcomes and tremendous results. Hence, the present review focuses on the recent advancement of different strategies of chitosan-polyphenol conjugate formation with their advantages and limitations. Furthermore, the therapeutic applicability of the combinatorial efficiency of chitosan-based conjugates formed using Gallic Acid, Curcumin, Catechin, and Quercetin in human health has been described in detail.
- Published
- 2022
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32. Bio-Nanohybrid Gelatin/Quantum Dots for Cellular Imaging and Biosensing Applications.
- Author
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Samal SK, Soenen S, Puppi D, De Wael K, Pati S, De Smedt S, Braeckmans K, and Dubruel P
- Subjects
- Amino Acids, Cadmium, Cadmium Compounds, Contrast Media, Gelatin, Hydrogen Peroxide, Sulfides chemistry, Biosensing Techniques methods, Quantum Dots chemistry
- Abstract
The bio-nanohybrid gelatin protein/cadmium sulfide (Gel/CdS) quantum dots (QDs) have been designed via a facile one-pot strategy. The amino acids group of gelatin chelate Cd
2+ and grow CdS QDs without any agglomeration. The1 H NMR spectra indicate that during the above process there are no alterations of the gelatin protein structure conformation and chemical functionalities. The prepared Gel/CdS QDs were characterized and their potential as a system for cellular imaging and the electrochemical sensor for hydrogen peroxide (H2 O2 ) detection applications were investigated. The obtained results demonstrate that the developed Gel/CdS QDs system could offer a simple and convenient operating strategy both for the class of contrast agents for cell labeling and electrochemical sensors purposes.- Published
- 2022
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33. Clinical progress of therapeutics and vaccines: Rising hope against COVID-19 treatment.
- Author
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Bandaru R, Rout SR, Kamble OS, Samal SK, Gorain B, Sahebkar A, Ahmed FJ, Kesharwani P, and Dandela R
- Abstract
Cases of deaths due to COVID-19 (COrona VIrus Disease-19) infection are increasing gradually worldwide. Immense research is ongoing to control this pandemic condition. Continual research outcomes are indicating that therapeutic and prophylactic agents are the possible hope to prevent the pandemic from spreading and to combat this increasing death count. Experience gained from previous coronavirus infections (eg., SARS (Severe Acute Respiratory Syndrome), MERS (Middle Ease Respiratory Syndrome), accumulated clinical knowledge during this pandemic, and research helped to identify a few therapeutic agents for emergency treatment of COVID-19. Thereby, monoclonal antibodies, antivirals, broad-spectrum antimicrobials, immunomodulators, and supplements are being suggested for treatment depending on the stage of the disease. These recommended treatments are authorized under medical supervision in emergency conditions only. Urgent need to control the pandemic condition had resulted in various approaches of repurposing the existing drugs, However, poorly designed clinical trials and associated outcomes do not provide enough evidence to fully approve treatments against COVID-19. So far, World Health Organization (WHO) authorized three vaccines as prophylactic against SARS-CoV-2. Here, we discussed about various therapeutic agents, their clinical trials, and limitations of trials for the management of COVID-19. Further, we have also spotlighted different vaccines in research in combating COVID-19., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2022 Elsevier Ltd. All rights reserved.)
- Published
- 2022
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34. Intranasal immunization with avian paramyxovirus type 3 expressing SARS-CoV-2 spike protein protects hamsters against SARS-CoV-2.
- Author
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Park HS, Matsuoka Y, Luongo C, Yang L, Santos C, Liu X, Ahlers LRH, Moore IN, Afroz S, Johnson RF, Lafont BAP, Dorward DW, Fischer ER, Martens C, Samal SK, Munir S, Buchholz UJ, and Le Nouën C
- Abstract
Current vaccines against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) are administered parenterally and appear to be more protective in the lower versus the upper respiratory tract. Vaccines are needed that directly stimulate immunity in the respiratory tract, as well as systemic immunity. We used avian paramyxovirus type 3 (APMV3) as an intranasal vaccine vector to express the SARS-CoV-2 spike (S) protein. A lack of pre-existing immunity in humans and attenuation by host-range restriction make APMV3 a vector of interest. The SARS-CoV-2 S protein was stabilized in its prefusion conformation by six proline substitutions (S-6P) rather than the two that are used in most vaccine candidates, providing increased stability. APMV3 expressing S-6P (APMV3/S-6P) replicated to high titers in embryonated chicken eggs and was genetically stable, whereas APMV3 expressing non-stabilized S or S-2P were unstable. In hamsters, a single intranasal dose of APMV3/S-6P induced strong serum IgG and IgA responses to the S protein and its receptor-binding domain, and strong serum neutralizing antibody responses to SARS-CoV-2 isolate WA1/2020 (lineage A). Sera from APMV3/S-6P-immunized hamsters also efficiently neutralized Alpha and Beta variants of concern. Immunized hamsters challenged with WA1/2020 did not exhibit the weight loss and lung inflammation observed in empty-vector-immunized controls; SARS-CoV-2 replication in the upper and lower respiratory tract of immunized animals was low or undetectable compared to the substantial replication in controls. Thus, a single intranasal dose of APMV3/S-6P was highly immunogenic and protective against SARS-CoV-2 challenge, suggesting that APMV3/S-6P is suitable for clinical development., (© 2022. This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply.)
- Published
- 2022
- Full Text
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35. Encoding of a transgene in-frame with a Newcastle disease virus protein increases transgene expression and stability.
- Author
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Elbehairy MA, Samal SK, and Belov GA
- Subjects
- Animals, Chickens, Newcastle disease virus genetics, Transgenes, Influenza A Virus, H5N1 Subtype genetics, Influenza in Birds, Newcastle Disease, Viral Vaccines
- Abstract
Newcastle disease virus (NDV) has been extensively explored as a vector for vaccine and oncolytic therapeutic development. In conventional NDV-based vectors, the transgene is arranged as a separate transcription unit in the NDV genome. Here, we expressed haemagglutinin protein (HA) of an avian influenza virus using an NDV vector design in which the transgene ORF is encoded in-frame with the ORF of an NDV gene. This arrangement does not increase the number of transcription units in the NDV genome, and imposes a selection pressure against mutations interrupting the transgene ORF. We placed the HA ORF upstream or downstream of N, M, F and HN ORFs of NDV so that both proteins are encoded in-frame and are separated by either a self-cleaving 2A peptide, furin cleavage site or both. Only constructs in which HA was placed downstream of the NDV HN were viable. These constructs expressed the transgene at a higher level compared to the vector encoding the same transgene in the same position in the NDV genome but as a separate transcription unit. Furthermore, the transgene expressed in one ORF with the NDV protein proved to be more stable over multiple passages. Thus, this design may be useful for applications where the stability of the transgene expression is highly important for a recombinant NDV vector.
- Published
- 2022
- Full Text
- View/download PDF
36. Antibodies Against Phosphorylcholine Among 60-Year-Olds: Clinical Role and Simulated Interactions.
- Author
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Samal SK, Panda PK, Vikström M, Leander K, de Faire U, Ahuja R, and Frostegård J
- Abstract
Aims: Antibodies against phosphorylcholine (anti-PC) are implicated as protection markers in atherosclerosis, cardiovascular disease (CVD), and other chronic inflammatory conditions. Mostly, these studies have been focused on IgM. In this study, we determined IgG, IgG1, and IgG2 anti-PC among 60-year-olds., Methods: Based on a 7-year follow-up of 60-year-olds (2,039 men and 2,193 women) from Stockholm County, we performed a nested case-control study of 209 incident CVD cases with 620 age- and sex-matched controls. Anti-PC was determined using ELISA. We predicted the binding affinity of PC with our fully human, in-house-produced IgG1 anti-PC clones (i.e., A01, D05, and E01) using the molecular docking and molecular dynamics simulation approach, to retrieve information regarding binding properties to PC., Results: After adjustment for confounders, IgG and IgG2 anti-PC showed some significant associations, but IgG1 anti-PC was much stronger as a protection marker. IgG1 anti-PC was associated with an increased risk of CVD below 33rd, 25th, and 10th percentile and of stroke below 33rd and 25th, and of myocardial infarction (MI) below 10th percentile. Among men, a strong association with stroke was determined below the 33rd percentile [HR 9.20, CI (2.22-38.12); p = 0.0022]. D05 clone has higher binding affinity followed by E01 and A01 using molecular docking and further have been confirmed during the course of 100 ns simulation. The stability of the D05 clone with PC was substantially higher., Conclusion: IgG1 anti-PC was a stronger protection marker than IgG anti-PC and IgG2 anti-PC and also separately for men. The molecular modeling approach helps in identifying the intrinsic properties of anti-PC clones and atomistic interactions with PC., Competing Interests: JF was named as inventor on patents related to Phosphorylcholine. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Samal, Panda, Vikström, Leander, de Faire, Ahuja and Frostegård.)
- Published
- 2022
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37. Dynamical modeling of miR-34a, miR-449a, and miR-16 reveals numerous DDR signaling pathways regulating senescence, autophagy, and apoptosis in HeLa cells.
- Author
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Gupta S, Panda PK, Hashimoto RF, Samal SK, Mishra S, Verma SK, Mishra YK, and Ahuja R
- Subjects
- Apoptosis genetics, Autophagy genetics, Cell Line, Tumor, Female, Gene Expression Regulation, Neoplastic, HeLa Cells, Humans, Signal Transduction, MicroRNAs genetics, MicroRNAs metabolism, Uterine Cervical Neoplasms genetics
- Abstract
Transfection of tumor suppressor miRNAs such as miR-34a, miR-449a, and miR-16 with DNA damage can regulate apoptosis and senescence in cancer cells. miR-16 has been shown to influence autophagy in cervical cancer. However, the function of miR-34a and miR-449a in autophagy remains unknown. The functional and persistent G1/S checkpoint signaling pathways in HeLa cells via these three miRNAs, either synergistically or separately, remain a mystery. As a result, we present a synthetic Boolean network of the functional G1/S checkpoint regulation, illustrating the regulatory effects of these three miRNAs. To our knowledge, this is the first synthetic Boolean network that demonstrates the advanced role of these miRNAs in cervical cancer signaling pathways reliant on or independent of p53, such as MAPK or AMPK. We compared our estimated probability to the experimental data and found reasonable agreement. Our findings indicate that miR-34a or miR-16 may control senescence, autophagy, apoptosis, and the functional G1/S checkpoint. Additionally, miR-449a can regulate just senescence and apoptosis on an individual basis. MiR-449a can coordinate autophagy in HeLa cells in a synergistic manner with miR-16 and/or miR-34a., (© 2022. The Author(s).)
- Published
- 2022
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38. Correction: Generation by Reverse Genetics of an Effective, Stable, Live-Attenuated Newcastle Disease Virus Vaccine Based on a Currently Circulating, Highly Virulent Indonesian Strain.
- Author
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Xiao S, Nayak B, Samuel A, Paldurai A, Kanabagattebasavarajappa M, Prajitno TY, Bharoto EE, Collins PL, and Samal SK
- Abstract
[This corrects the article DOI: 10.1371/journal.pone.0052751.].
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- 2022
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39. SARI inhibits growth and reduces survival of oral squamous cell carcinomas (OSCC) by inducing endoplasmic reticulum stress.
- Author
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Priyadarshini M, Maji S, Samal SK, Rath R, Li J, Das SK, Emdad L, Kundu CN, Fisher PB, and Dash R
- Subjects
- Animals, Carcinoma, Squamous Cell pathology, Cell Line, Tumor, Cell Survival physiology, HEK293 Cells, Humans, Male, Mice, Mice, Inbred BALB C, Mice, Nude, Mouth Neoplasms pathology, Squamous Cell Carcinoma of Head and Neck pathology, Xenograft Model Antitumor Assays methods, Basic-Leucine Zipper Transcription Factors biosynthesis, Carcinoma, Squamous Cell metabolism, Endoplasmic Reticulum Stress physiology, Growth Inhibitors biosynthesis, Mouth Neoplasms metabolism, Squamous Cell Carcinoma of Head and Neck metabolism, Tumor Suppressor Proteins biosynthesis
- Abstract
Aims: SARI (suppressor of activator protein (AP)-1, regulated by interferon (IFN) was identified as a novel tumor suppressor by applying subtraction hybridization to terminally differentiating human melanoma cells. The anti-tumor activity of SARI and the correlation between expression and cancer aggression and metastasis has been examined in multiple cancers, but its potential role in oral squamous cell carcinomas (OSCC) has not been explored., Methods: SARI expression was monitored in tumor tissues of OSCC patients by performing immunohistochemistry. Ectopic expression of SARI was achieved using a replication defective adenovirus expressing SARI (Ad.SARI). A nude mouse xenograft model was used to evaluate the in vivo efficacy of SARI. Endoplasmic reticulum (ER) stress was monitored in SARI infected OSCC cells by confocal microscopy., Key Finding: In this study, we demonstrate that SARI expression is significantly lower in OSCC tumor tissue as compared to normal adjacent tissue. Ectopic expression of SARI induces cancer-specific cell death in human OSCC cell lines and in a paclitaxel plus cisplatin non-responder OSCC patient-derived (PDC1) cell line. Mechanistically, SARI inhibits zinc finger protein GLI1 expression through induction of endoplasmic reticulum (ER) stress. Using a nude mouse xenograft model, we show that intratumoral injections of Ad.SARI significantly reduce PDC1 tumor burden, whereas treatment with an ER stress inhibitor efficiently rescues tumors from growth inhibition., Significance: Overall, our data provides a link between induction of ER stress and inhibition of the GLI1/Hedgehog signaling pathway and the tumor suppressive activity of SARI in the context of OSCC., (Copyright © 2021 Elsevier Inc. All rights reserved.)
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- 2021
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40. Healable, Adhesive, and Conductive Nanocomposite Hydrogels with Ultrastretchability for Flexible Sensors.
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Ma W, Cao W, Lu T, Jiang Z, Xiong R, Samal SK, and Huang C
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- Adhesives, Biocompatible Materials chemical synthesis, Electric Conductivity, Humans, Hydrogels chemical synthesis, Materials Testing, Tensile Strength, Biocompatible Materials chemistry, Hydrogels chemistry, Nanocomposites chemistry, Wearable Electronic Devices
- Abstract
In recent years, conductive hydrogels have generated tremendous attention in biomedicals and bioelectronics fields due to their excellent physiochemical properties. In this study, a physically cross-linked conducting hydrogel has been designed in combination with cellulose nanocrystalline (CNC), polyacrylic acid (PAA) chains, laurel methacrylate, and sodium dodecyl sulfate. The obtained result shows that the hydrogel prepared is ultrastretchable, mechanically robust, transparent, biocompatible, conductive, and self-healing. The mechanical property of the prepared hydrogel is optimized through variation of the CNC content. The optimal hydrogel (CNC-1/PAA) exhibits an impressive mechanics, including high stretchability (∼1800%) and compressibility, good elasticity, and fatigue resistance. Furthermore, the conductivity of the hydrogel enables tensile strain- and pressure-sensing capabilities. The CNC/PAA-based flexible sensors are successfully designed, which shows high sensitivity, fast response (290 ms), and excellent cycle stability as well as the pressure sensing capability. As a result, the designed hydrogel has the ability to sense and detect diverse human motion, including elbow/finger/wrist bending and speaking, which demonstrates that the designed self-healing conductive hydrogels have significant potential for applications in flexible electronics.
- Published
- 2021
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41. Explicating the molecular level drug-polymer interactions at the interface of supersaturated solution of the model drug: Albendazole.
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Joshi P, Mallepogu P, Kaur H, Singh R, Sodhi I, Samal SK, Jena KC, and Sangamwar AT
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- Albendazole, Povidone, Solubility, Pharmaceutical Preparations, Polymers
- Abstract
Supersaturation as a formulation principle relates to the aqueous solubility of poorly soluble drugs in solution . However, supersaturation state of drugs tends to crystallize because of its thermodynamic instability thereby compromising the solubility and biopharmaceutical performance of drugs. The present study aims to investigate the supersaturation potential of albendazole (ABZ) and its precipitation via nucleation and crystal growth. We hypothesized the use of polymers will avoid ABZ precipitation by interacting with drug molecules. The drug polymer interactions are characterized using conventional methods of Fourier transform infrared (FTIR), Nuclear magnetic resonance (NMR) and Polarized light microscopy (PLM). We have used a novel approach of sum frequency generation (SFG) vibrational spectroscopic in exploring the drug polymer interactions at air-water interface. Recently we have reported the SFG for e rifaximin-polymer interactions (Singh et al., 2021). The supersaturation assay, saturation solubility studies and nucleation induction time analysis revealed polyvinyl alcohol (PVA) and polyvinyl pyrrolidone (PVP K30) as effective precipitation inhibitors thereby enhancing the ABZ equilibrium solubility and in vitro supersaturation maintenance of ABZ. Further, modification in the solid state of ABZ has confirmed the influence of polymers on its precipitation behaviour. We conclude that PVA and PVP K30 act as nucleation and crystal growth inhibitor, respectively for the precipitation inhibition of ABZ., (Copyright © 2021. Published by Elsevier B.V.)
- Published
- 2021
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42. Ebola vaccine-induced protection in nonhuman primates correlates with antibody specificity and Fc-mediated effects.
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Meyer M, Gunn BM, Malherbe DC, Gangavarapu K, Yoshida A, Pietzsch C, Kuzmina NA, Saphire EO, Collins PL, Crowe JE Jr, Zhu JJ, Suchard MA, Brining DL, Mire CE, Cross RW, Geisbert JB, Samal SK, Andersen KG, Alter G, Geisbert TW, and Bukreyev A
- Subjects
- Animals, Antibodies, Neutralizing, Antibodies, Viral, Antibody Specificity, Humans, Primates, Ebola Vaccines, Ebolavirus, Hemorrhagic Fever, Ebola prevention & control
- Abstract
Although substantial progress has been made with Ebola virus (EBOV) vaccine measures, the immune correlates of vaccine-mediated protection remain uncertain. Here, five mucosal vaccine vectors based on human and avian paramyxoviruses provided nonhuman primates with varying degrees of protection, despite expressing the same EBOV glycoprotein (GP) immunogen. Each vaccine produced antibody responses that differed in Fc-mediated functions and isotype composition, as well as in magnitude and coverage toward GP and its conformational and linear epitopes. Differences in the degree of protection and comprehensive characterization of the response afforded the opportunity to identify which features and functions were elevated in survivors and could therefore serve as vaccine correlates of protection. Pairwise network correlation analysis of 139 immune- and vaccine-related parameters was performed to demonstrate relationships with survival. Total GP-specific antibodies, as measured by biolayer interferometry, but not neutralizing IgG or IgA titers, correlated with survival. Fc-mediated functions and the amount of receptor binding domain antibodies were associated with improved survival outcomes, alluding to the protective mechanisms of these vaccines. Therefore, functional qualities of the antibody response, particularly Fc-mediated effects and GP specificity, rather than simply magnitude of the response, appear central to vaccine-induced protection against EBOV. The heterogeneity of the response profile between the vaccines indicates that each vaccine likely exhibits its own protective signature and the requirements for an efficacious EBOV vaccine are complex., (Copyright © 2021 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)
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- 2021
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43. Combination of Phospholipid Complex and Matrix Dispersion.
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Chakravarti RK, Kaur S, Samal SK, Kashyap MC, and Sangamwar AT
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- Administration, Oral, Animals, Biological Availability, Female, Polyethylene Glycols administration & dosage, Polyethylene Glycols chemistry, Polyethylene Glycols pharmacokinetics, Polyvinyls administration & dosage, Polyvinyls chemistry, Polyvinyls pharmacokinetics, Rats, Rats, Sprague-Dawley, Simvastatin administration & dosage, Solubility, Solvents administration & dosage, Solvents chemistry, Solvents pharmacokinetics, Phospholipids chemistry, Phospholipids pharmacokinetics, Simvastatin chemistry, Simvastatin pharmacokinetics
- Abstract
Phospholipid complexation, despite being a successful, versatile, and burgeoning strategy, stickiness of phospholipids leads to suboptimal dissolution rate of drugs. This work was undertaken to fabricate simvastatin-phospholipid complex (SIM-PLC)-loaded matrix dispersion (SIM-PLC-MD) using Soluplus® as carrier material, to augment dispersibility and dissolution of SIM-PLC without altering complexation between simvastatin (SIM) and phospholipid. SIM-PLC and SIM-PLC-MD were prepared using solvent evaporation and discontinuous solvent evaporation techniques, respectively. The successful complexation was substantiated by FTIR method. Besides, PXRD and SEM studies disclosed the absence of crystallinity of SIM in both SIM-PLC and SIM-PLC-MD. The TEM analysis monitored the self-assembly of SIM-PLC and SIM-PLC-MD into colloidal structures, which could be correlated with redispersion in GIT fluids upon oral administration. The considerable increase in hydrophilicity of SIM-PLC-MD and SIM-PLC as evident from partition coefficient experiment can further be correlated with their remarkably improved solubility profiles in the following pattern: SIM-PLC-MD˃SIM-PLC˃SIM. Correspondingly, improved dispersibility of SIM-PLC-MD in comparison to SIM-PLC can be accountable for accelerated dissolution rate by 2.53-fold and 1.5-fold in pH 1.2 and 6.8 conditions, respectively. The oral pharmacokinetic evaluation in Sprague Dawley (SD) rats revealed 3.19-fold enhancement in oral bioavailability of SIM through SIM-PLC-MD when compared with plain SIM, whereas 1.83-fold increment was observed in the case of SIM-PLC. Finally, the efficacy experimentation in SD rats revealed that SIM-PLC-MD significantly reduced triglycerides and cholesterol levels in comparison to SIM and SIM-PLC. These outcomes suggest that a matrix dispersion strategy improves oral bioavailability and hypolipidemic activity of SIM.
- Published
- 2021
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44. Potential natural immunization against atherosclerosis in hibernating bears.
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Samal SK, Fröbert O, Kindberg J, Stenvinkel P, and Frostegård J
- Subjects
- Animals, Atherosclerosis pathology, Atherosclerosis prevention & control, Hibernation, Seasons, Sweden, Antibodies, Antiphospholipid immunology, Atherosclerosis immunology, Immunity, Innate immunology, Immunoglobulin M immunology, Malondialdehyde immunology, Phosphorylcholine immunology, Ursidae immunology
- Abstract
Brown bears (Ursus arctos) hibernate for 5-6 months during winter, but despite kidney insufficiency, dyslipidemia and inactivity they do not seem to develop atherosclerosis or cardiovascular disease (CVD). IgM antibodies against phosphorylcholine (anti-PC) and malondialdehyde (anti-MDA) are associated with less atherosclerosis, CVD and mortality in uremia in humans and have anti-inflammatory and other potentially protective properties. PC but not MDA is exposed on different types of microorganisms. We determine anti-PC and anti-MDA in brown bears in summer and winter. Paired serum samples from 12 free ranging Swedish brown bears were collected during hibernation in winter and during active state in summer and analyzed for IgM, IgG, IgG1/2 and IgA anti-PC and anti-MDA by enzyme linked immunosorbent assay (ELISA). When determined as arbitrary units (median set at 100 for summer samples), significantly raised levels were observed in winter for anti-PC subclasses and isotypes, and for IgA anti-PC the difference was striking; 100 IQR (85.9-107.9) vs 782.3, IQR (422.8-1586.0; p < 0.001). In contrast, subclasses and isotypes of anti-MDA were significantly lower in winter except IgA anti-MDA, which was not detectable. Anti-PCs are significantly raised during hibernation in brown bears; especially IgA anti-PC was strikingly high. In contrast, anti-MDA titers was decreased during hibernation. Our observation may represent natural immunization with microorganisms during a vulnerable period and could have therapeutic implications for prevention of atherosclerosis.
- Published
- 2021
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45. Factors Influencing Clinical After Effects of Post Orthognathic Surgery - An Observational Clinical Study.
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Nasreen S, Tagala MS, Samal SK, Gupta AR, Sah RP, and Bhattacharjee D
- Abstract
Background: For maintaining the occlusion, screws to anchor bones are needed to be used in transalveolar manner to get the intermaxillary fixation in participants with no preoperative orthodontic treatment or participants with loose or broken appliances., Aims: The present clinical trial was hence aimed to assess the postoperative complications following orthognathic surgical repair of skeletal malocclusion., Materials and Methods: Forty-two participants were divided into two groups ( n = 22). In Group I, predrill was done to create the holes in transalveolar position before screw insertion. For Group II, self-cutting screws were used without the drills. The radiographs were then taken to assess the associated root injuries. To evaluate the effect of different steroid doses on the pain, nerve healing, and swelling, the participants were divided into three groups ( n = 14). Plate removal and associated factors were also evaluated. Collected data were statistically analyzed., Results: In Group where no predrill was done, no root injuries were seen. Considerably less facial edema was observed in Group II and III compared to control Group I. This difference was statistically significant with a P value of 0.2057. At 1 week, 3 months, and 6-month postoperatively in Group II and Group III, no significant difference was seen. No significant difference in the postoperative pain between the groups was seen ( P = 0.85103). Neurosensory Visual Analog Score measurement revealed no significant difference between three groups at 6 months with the P value of 0.81821., Conclusion: The present study concludes that risk for the root injury is possessed by the screws that require predrill, whereas the self-drilling screws had no risk for root injury., Competing Interests: There are no conflicts of interest., (Copyright: © 2021 Journal of Pharmacy and Bioallied Sciences.)
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- 2021
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46. Retraction notice to "Immunogenicity of newcastle disease virus vectors expressing norwalk virus capsid protein in the presence or absence of VP2 protein" [Virology (484) (October 2015) 163-169].
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Kim SH, Chen S, Jiang X, Green KY, and Samal SK
- Published
- 2021
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47. Elucidating the Molecular Mechanism of Drug-Polymer Interplay in a Polymeric Supersaturated System of Rifaximin.
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Singh R, Thorat V, Kaur H, Sodhi I, Samal SK, Jena KC, and Sangamwar AT
- Subjects
- Chemistry, Pharmaceutical, Crystallization, Hydrogen Bonding, Rifaximin administration & dosage, Solubility, Drug Delivery Systems methods, Pharmaceutic Aids chemistry, Polymers chemistry, Rifaximin chemistry
- Abstract
Supersaturated drug delivery system (SDDS) enables the solubility and sustained membrane transport of poorly water-soluble drugs. SDDS provides higher drug concentration in the dispersed phase and equilibrium in the continuous phase, which corresponds to amorphous solubility of the drug. Rifaximin (RFX) is a nonabsorbable BCS class IV drug approved for the treatment of irritable bowel syndrome and effective against Helicobacter pylori. RFX shows slow crystallization and precipitation in an acidic pH of 1.2-2, leading to obliteration of its activity in the gastrointestinal tract. The objective of the present study is to inhibit the precipitation of RFX, involving screening of polymers at different concentrations, using an in-house developed microarray plate method and solubility studies which set forth hydroxypropyl methylcellulose (HPMC) E15, Soluplus, and polyvinyl alcohol to be effective precipitation inhibitors (PIs). Drug-polymer precipitates (PPTS) are examined for surface morphology by scanning electron microscopy, solid-phase transformation by hot stage microscopy, the nature of PPTS by polarized light microscopy, and drug-polymer interactions by Fourier transform infrared and nuclear magnetic resonance spectroscopy. Besides, the unfathomed molecular mechanism of drug-polymer interplay is discerned at the air-water interface using sum-frequency generation spectroscopy to correlate the interfacial hydrogen bonding properties in bulk water. Surprisingly, all studies disseminate HPMC E15 and Soluplus as effective PIs of RFX.
- Published
- 2021
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48. Recovery of Recombinant Avian Paramyxovirus Type-3 Strain Wisconsin by Reverse Genetics and Its Evaluation as a Vaccine Vector for Chickens.
- Author
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Elbehairy MA, Khattar SK, and Samal SK
- Subjects
- Animals, Avulavirus metabolism, Avulavirus Infections prevention & control, Avulavirus Infections virology, Chickens, Genetic Vectors metabolism, Poultry Diseases prevention & control, Reverse Genetics, Specific Pathogen-Free Organisms, Viral Vaccines administration & dosage, Viral Vaccines immunology, Wisconsin, Avulavirus genetics, Avulavirus Infections veterinary, Genetic Vectors genetics, Poultry Diseases virology, Viral Vaccines genetics
- Abstract
A reverse genetic system for avian paramyxovirus type-3 (APMV-3) strain Wisconsin was created and the infectious virus was recovered from a plasmid-based viral antigenomic cDNA. Green fluorescent protein (GFP) gene was cloned into the recombinant APMV-3 genome as a foreign gene. Stable expression of GFP by the recovered virus was confirmed for at least 10 consecutive passages. APMV-3 strain Wisconsin was evaluated against APMV-3 strain Netherlands and APMV-1 strain LaSota as a vaccine vector. The three viral vectors expressing GFP as a foreign protein were compared for level of GFP expression level, growth rate in chicken embryo fibroblast (DF-1) cells, and tissue distribution and immunogenicity in specific pathogen-free (SPF) day-old chickens. APMV-3 strain Netherlands showed highest growth rate and GFP expression level among the three APMV vectors in vitro. APMV-3 strain Wisconsin and APMV-1 strain LaSota vectors were mainly confined to the trachea after vaccination of day-old SPF chickens without any observable pathogenicity, whereas APMV-3 strain Netherlands showed wide tissue distribution in different body organs (brain, lungs, trachea, and spleen) with mild observable pathogenicity. In terms of immunogenicity, both APMV-3 strain-vaccinated groups showed HI titers two to three fold higher than that induced by APMV-1 strain LaSota vaccinated group. This study offers a novel paramyxovirus vector (APMV-3 strain Wisconsin) which can be used safely for vaccination of young chickens as an alternative for APMV-1 strain LaSota vector.
- Published
- 2021
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49. Influence of tillage based crop establishment and residue management practices on soil quality indices and yield sustainability in rice-wheat cropping system of Eastern Indo-Gangetic Plains.
- Author
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Saurabh K, Rao KK, Mishra JS, Kumar R, Poonia SP, Samal SK, Roy HS, Dubey AK, Choubey AK, Mondal S, Bhatt BP, Verma M, and Malik RK
- Abstract
Rice-wheat cropping system (RWCS) is the most important system occupying around 26 M ha spread over the Indo Gangetic Plains in South Asia and China. Many long-term trials were led to assess the agronomic productivity and economic profitability of various combinations of conservation agricultural (CA) practices (zero tillage, residue management and crop establishment) in RWCS of Eastern Indo-Gangetic Plains (EIGP) of India. The purpose of this study was to investigate the best management practices involving different tillage-based crop establishment and residue retention techniques and their contribution to agricultural system sustainability through improvement in soil health by developing soil quality index (SQI). We have used SQI as an instrument based on physical [macro aggregate stability (MAS), available water capacity (AWC) and soil penetration resistance (SPR)], chemical [soil organic carbon (OC), available N, available P and available K] and biological [microbial biomass carbon (MBC), fluorescein diacetate (FDA) and dehydrogenase activity (DHA)] properties of soil, because these are very useful indicators of soil's functions for agronomic productivity and soil fertility. Soil properties like MAS, OC, MBC, FDA and DHA were higher by 47, 18, 56, 48 and 53%, respectively, under ZTDSR-ZTW (T
7 : Zero-till direct seeded rice - Zero-till wheat) than RPTR-CTW (T1 : Random puddled transplanted rice - Conventional till broadcasted wheat), at 0-10 cm. CA based treatment T7 also recorded lower SPR (126 N cm-1 ). SQI for different treatments were calculated by performing principal component analysis based on the total data set method. The higher system rice equivalent yield of 12.41 t ha-1 was observed at SQI value of 0.90 at 0-10 cm and 0.86 at 10-20 cm in T7 . It can be concluded that crop residue retention on the surface with zero tillage is beneficial for the sustainability and productivity of the RWCS in EIGP of India., Competing Interests: The authors report no declarations of interest., (© 2020 The Author(s).)- Published
- 2021
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50. Retraction notice to "Modified Newcastle disease virus vectors expressing the H5 hemagglutinin induce enhanced protection against highly pathogenic H5N1 avian influenza virus in chickens" [Vaccine 32(35) (2014) 4428-4435].
- Author
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Kim SH, Paldurai A, Xiao S, Collins PL, and Samal SK
- Published
- 2021
- Full Text
- View/download PDF
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