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3. In Vitro Techniques in Plant Breeding

Author

Sarma, M. K., Sharma, Anwesha Ananya, Samantara, Kajal, Wani, Shabir H., Raina, Aamir, editor, Wani, Mohammad Rafiq, editor, Laskar, Rafiul Amin, editor, Tomlekova, Nasya, editor, and Khan, Samiullah, editor

Published
2023
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9. Gloriosa superba (Glory Lily)

Author

Dash, Umakanta, primary, Bhardwaj, Ankita, additional, Ashwath, M. N., additional, Vats, Preeti, additional, Mohapatra, Sourav Ranjan, additional, and Samantara, Kajal, additional

Published
2023
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11. Editing genomes to modify plant response to abiotic stress

Author

Kushwaha, Amar Kant, primary, Shiv, Aalok, additional, Samantara, Kajal, additional, Chand, Subhash, additional, Manjhi, Prashant Kumar, additional, Goyal, Lakshya, additional, Kaldate, Supriya, additional, Kumar, Sanjeev, additional, Razzaq, Ali, additional, and Wani, Shabir Hussain, additional

Published
2023
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12. List of contributors

Author

Abbaszadeh-Dahaji, Payman, primary, Abdel-Aziz, Heba Mahmoud Mohammad, additional, Abobatta, Waleed Fouad, additional, Ahmad, Shakeel, additional, Ali, Sajid, additional, Al-taey, Duraid K.A., additional, Anjum, Muhammad Akbar, additional, Asgari Lajayer, Behnam, additional, Astatkie, Tess, additional, Bansal, Monika, additional, Beena, R., additional, Benavides-Mendoza, Adalberto, additional, Borges, Cristine Vanz, additional, Cabrera-De la Fuente, Marcelino, additional, Chakraborti, Dipankar, additional, Chand, Subhash, additional, Chaudhuri, Rituparna Kundu, additional, Chinchmalatpure, Anil, additional, Denaxa, Nikoleta-Kleio, additional, Dilawari, Rahul, additional, Ditta, Allah, additional, Ejaz, Shaghef, additional, Emami, Somayeh, additional, Etesami, Hassan, additional, Farooq, Muhammad, additional, Farooq, Samra, additional, Fatehi, Foad, additional, Fuentes-Lara, Laura Olivia, additional, Ghorbanpour, Mansour, additional, Ghosh, Sanatan, additional, Goyal, Lakshya, additional, Guhey, Arti, additional, Guru, Akankhya, additional, Hasaneen, Mohammed Nagib Abdel-Ghany, additional, Hatami, Mehrnaz, additional, Hazrati, Saeid, additional, Hemati, Arash, additional, Hussain, Sajjad, additional, Jadhao, Kundan Rajpalsingh, additional, Jeong, Byoung Ryong, additional, Kaldate, Supriya, additional, Kapoor, Riti Thapar, additional, Kariman, Khalil, additional, Kazemi Oskuei, Bita, additional, Khalid, Muhammad Fasih, additional, Khaliq, Ghulam, additional, Khan, Rashid Iqbal, additional, Khanum, Rizwana, additional, Khoshmanzar, Elaheh, additional, Khoshru, Bahman, additional, Kumar, Sanjeev, additional, Kushwaha, Amar Kant, additional, Lima, Giuseppina Pace Pereira, additional, López-Sánchez, Raúl Carlos, additional, Maleki, Mahmood, additional, Manasa, R., additional, Manikanta, Ch.L.N., additional, Manjhi, Prashant Kumar, additional, Maraschin, Marcelo, additional, Mehta, Sahil, additional, Mohammadi, Hamid, additional, Mohammadi Alagoz, Soheyla, additional, Nawaz, Aamir, additional, Naz, Misbah, additional, Ntanos, Efstathios, additional, Omidvari, Mahtab, additional, Orsi, Ricardo Oliveira, additional, Panda, Surabhika, additional, Pandey, Brij B., additional, Pandey, Vimal, additional, Prasad, Indivar, additional, Purohit, Arnab, additional, Ramesh, K, additional, Ratnakumar, P., additional, Ravikiran, K.T., additional, Razzaq, Ali, additional, Roussos, Peter A., additional, Rout, Gyana Ranjan, additional, Sabir, Samreen, additional, Sahu, M.P., additional, Saleem, Muhammad Shahzad, additional, Samantara, Kajal, additional, Shafea, Leila, additional, Shahzadi, Asifa, additional, Sharma, Parbodh Chander, additional, Shiv, Aalok, additional, Singh, Baljinder, additional, Singh, Yogeshwar, additional, Sohail, Muhammad, additional, Swain, Rinny, additional, Talebi, Seyed Mehdi, additional, Tsafouros, Athanasios, additional, Ullah, Naseer, additional, Ullah, Sami, additional, Vaikuntapu, P.R., additional, Vibhute, Sagar D., additional, Vineeth, T.V., additional, Wani, Shabir Hussain, additional, Younis, Mahmoud El-Baz, additional, and Zakir, Iqra, additional

Published
2023
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16. Contributors

Author

Agrawal, Nisha, primary, Ajay, B.C., additional, Amrate, Pawan Kumar, additional, Atif, Rana Muhammad, additional, Azhar, Salman, additional, Ratnaparkhe, Milind B., additional, Bera, Sandip Kumar, additional, Bosamia, Tejas C., additional, Chaitanya, Alamuru Krishna, additional, Choudhary, Mukesh, additional, Das, Antara, additional, Das, Samarendra, additional, Desouky, Said E., additional, Devi, Urmila, additional, Devi, Yengkhom Linthoingambi, additional, Dhillon, Guriqbal Singh, additional, Elakhdar, Ammar, additional, Elakhdar, Ibrahim, additional, Farooq, Samra, additional, Gahlaut, Vijay, additional, Gautam, Tinku, additional, Gupta, Sanjay, additional, Jain, Priyanka, additional, Jamedar, Harsha Vardhan Rayudu, additional, Jat, Bahadur Singh, additional, Joshi, Anjali, additional, Kamboj, Disha, additional, Kaniganti, Sirisha, additional, Kaur, Amandeep, additional, Kaur, Manpreet, additional, Kaur, Satinder, additional, Khaidr, Rania, additional, Kona, Praveen, additional, Kumar, Mithlesh, additional, Kumar, Pardeep, additional, Kumar, Pawan, additional, Kumar, Penumajji Ganesh, additional, Kumar, Sanjeev, additional, Kumar, Satish, additional, Kumawat, Giriraj, additional, Lamalakshmi Devi, E., additional, Maheshwari, Hemant S., additional, Malik, Palvi, additional, Mekala, Rudrakshi, additional, Mondal, Kinjal, additional, Mukta, Archana, additional, Nataraj, Vennampally, additional, Noman, Muhammad Usama, additional, Padhy, Ashish Kumar, additional, Padhy, Asish Kumar, additional, Pankaj, Yaswant Kumar, additional, Pitha, Chetariya Chana, additional, Priyadarshini, Parichita, additional, Radhakrishnan, T., additional, Rai, Shesh N., additional, Raigar, Om Prakash, additional, Rajput, Laxman Singh, additional, Rakshit, Sujay, additional, Rani, Kirti, additional, Rashid, Muhammad Abdul Rehman, additional, Raza, Qasim, additional, Razzaq, Ali, additional, Reyes, Vincent P., additional, Sabar, Muhammad, additional, Sahoo, Smrutishree, additional, Sahu, Sarika, additional, Saleem, Fozia, additional, Samantara, Kajal, additional, Sarma, R.N., additional, Savitri, Evika Sandi, additional, Shahzadi, Asifa, additional, Shanmugam, A., additional, Sharma, Achla, additional, Sharma, Himanshu, additional, Sheoran, Seema, additional, Shivakumar, M., additional, Singh, Baljinder, additional, Singh, N.K., additional, Singh, Sangeeta, additional, Sinha, Shruti, additional, Theunuo, Sakuonuo, additional, Tripathi, Rachana, additional, Tufchi, Mahak, additional, Verma, Harendra, additional, Wani, Shabir H., additional, and Zunjare, Rajkumar Uttamrao, additional

Published
2022
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17. Accelerating wheat improvement through trait characterization: advances and perspectives.

Author

Roychowdhury, Rajib, Ghatak, Arindam, Kumar, Manoj, Samantara, Kajal, Weckwerth, Wolfram, and Chaturvedi, Palak

Subjects
SUSTAINABLE agriculture, FUNCTIONAL genomics, WHEAT breeding, GERMPLASM, HAPLOTYPES
Abstract

Wheat (Triticum spp.) is a primary dietary staple food for humanity. Many wheat genetic resources with variable genomes have a record of domestication history and are widespread throughout the world. To develop elite wheat varieties, agronomical and stress‐responsive trait characterization is foremost for evaluating existing germplasm to promote breeding. However, genomic complexity is one of the primary impediments to trait mining and characterization. Multiple reference genomes and cutting‐edge technologies like haplotype mapping, genomic selection, precise gene editing tools, high‐throughput phenotyping platforms, high‐efficiency genetic transformation systems, and speed‐breeding facilities are transforming wheat functional genomics research to understand the genomic diversity of polyploidy. This review focuses on the research achievements in wheat genomics, the available omics approaches, and bioinformatic resources developed in the past decades. Advances in genomics and system biology approaches are highlighted to circumvent bottlenecks in genomic and phenotypic selection, as well as gene transfer. In addition, we propose conducting precise functional genomic studies and developing sustainable breeding strategies for wheat. These developments in understanding wheat traits have speed up the creation of high‐yielding, stress‐resistant, and nutritionally enhanced wheat varieties, which will help in addressing global food security and agricultural sustainability in the era of climate change. [ABSTRACT FROM AUTHOR]

Published
2024
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18. Basal ABA signaling balances transpiration and photosynthesis.

Author

Pizzio, Gaston A., Mayordomo, Cristian, Illescas‐Miranda, Jonatan, Coego, Alberto, Bono, Mar, Sanchez‐Olvera, Mayra, Martin‐Vasquez, Constanza, Samantara, Kajal, Merilo, Ebe, Forment, Javier, Estevez, Juan Carlos, Nebauer, Sergio G., and Rodriguez, Pedro L.

Subjects
WATER efficiency, ABSCISIC acid, MOLECULAR genetics, GENOME editing, PLANT growth, NICOTIANA benthamiana
Abstract

The balance between the CO2 entry for photosynthesis and transpiration water loss is crucial for plant growth, and ABA signaling can affect this equilibrium. To test how ABA balances plant growth and environmental adaptation, we performed molecular genetics studies in the biotech crop Nicotiana benthamiana under well‐watered or drought conditions. Studies on ABA signaling in crops are complicated by the multigenic nature of the PYR/PYL/RCAR ABA receptor family and its functional redundancy, which is particularly challenging in polyploid plants. We have generated a pentuple pyl mutant in the allotetraploid Nicotiana benthamiana through CRISPR/Cas9 gene editing. The pentuple mutant is impaired in 2 NbPYL1‐like and 3 NbPYL8‐like receptors, affecting the regulation of transpiration and several ABA‐dependent transcriptional processes. RNA‐seq and metabolite analysis revealed that the synthesis of galactinol, an essential precursor for the osmoprotective raffinose family of oligosaccharides, is ABA‐dependent and impaired in the mutant under osmotic stress. In contrast, our results show that, under well‐watered conditions, partial inactivation of ABA signaling leads to higher CO2 entry and photosynthesis in the mutant than in WT. Photosynthesis analyses revealed an increased CO2 diffusion capacity mediated by higher stomatal and mesophyll conductances, and higher substomatal CO2 concentration in the pentuple mutant. RNA‐seq analyses revealed that genes associated with cell wall loosening (e.g., expansins) and porosity were strongly downregulated by ABA in WT. In summary, a partial relief of the ABA control on transpiration mediated by ABA receptors positively affects photosynthesis when water is not limited, at the expense of reduced water use efficiency. [ABSTRACT FROM AUTHOR]

Published
2024
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22. Green revolution to genome revolution: driving better resilient crops against environmental instability

Author

Chawla, Rukoo, Chawla, Rukoo, Poonia, Atman, Samantara, Kajal, Mohapatra, Sourav Ranjan, Naik, S. Balaji, Ashwath, M. N., Đalović, Ivica, Prasad, P. V. Vara, Chawla, Rukoo, Chawla, Rukoo, Poonia, Atman, Samantara, Kajal, Mohapatra, Sourav Ranjan, Naik, S. Balaji, Ashwath, M. N., Đalović, Ivica, and Prasad, P. V. Vara

Abstract

Crop improvement programmes began with traditional breeding practices since the inception of agriculture. Farmers and plant breeders continue to use these strategies for crop improvement due to their broad application in modifying crop genetic compositions. Nonetheless, conventional breeding has significant downsides in regard to effort and time. Crop productivity seems to be hitting a plateau as a consequence of environmental issues and the scarcity of agricultural land. Therefore, continuous pursuit of advancement in crop improvement is essential. Recent technical innovations have resulted in a revolutionary shift in the pattern of breeding methods, leaning further towards molecular approaches. Among the promising approaches, marker-assisted selection, QTL mapping, omics-assisted breeding, genome-wide association studies and genome editing have lately gained prominence. Several governments have progressively relaxed their restrictions relating to genome editing. The present review highlights the evolutionary and revolutionary approaches that have been utilized for crop improvement in a bid to produce climate-resilient crops observing the consequence of climate change. Additionally, it will contribute to the comprehension of plant breeding succession so far. Investing in advanced sequencing technologies and bioinformatics will deepen our understanding of genetic variations and their functional implications, contributing to breakthroughs in crop improvement and biodiversity conservation.

Published
2023

26. Orphan legumes: harnessing their potential for food, nutritional and health security through genetic approaches

Author

Chongtham, Sunil Kumar, primary, Devi, Elangbam Lamalakshmi, additional, Samantara, Kajal, additional, Yasin, Jeshima Khan, additional, Wani, Shabir Hussain, additional, Mukherjee, Soumya, additional, Razzaq, Ali, additional, Bhupenchandra, Ingudam, additional, Jat, Aanandi Lal, additional, Singh, Laishram Kanta, additional, and Kumar, Amit, additional

Published
2022
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27. Abscisic Acid: Role in Fruit Development and Ripening

Author

Gupta, Kapil, primary, Wani, Shabir H., additional, Razzaq, Ali, additional, Skalicky, Milan, additional, Samantara, Kajal, additional, Gupta, Shubhra, additional, Pandita, Deepu, additional, Goel, Sonia, additional, Grewal, Sapna, additional, Hejnak, Vaclav, additional, Shiv, Aalok, additional, El-Sabrout, Ahmed M., additional, Elansary, Hosam O., additional, Alaklabi, Abdullah, additional, and Brestic, Marian, additional

Published
2022
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28. Breeding More Crops in Less Time: A Perspective on Speed Breeding

Author

Samantara, Kajal, primary, Bohra, Abhishek, additional, Mohapatra, Sourav Ranjan, additional, Prihatini, Riry, additional, Asibe, Flora, additional, Singh, Lokendra, additional, Reyes, Vincent P., additional, Tiwari, Abha, additional, Maurya, Alok Kumar, additional, Croser, Janine S., additional, Wani, Shabir Hussain, additional, Siddique, Kadambot H. M., additional, and Varshney, Rajeev K., additional

Published
2022
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