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Bioponics has the potential to recover nutrients from organic waste streams, such as chicken manure and digestate with high volatile fatty acid (VFA) contents through crop production. Acetic acid, a dominant VFA, was supplemented weekly (0, 500, 1000, and 1500 mg/L) in a chicken manure-based bioponic system, and its effect on the performance of bioponics (e.g., plant yield and nitrogen and phosphorus availabilities) was examined. Microbial communities were analyzed using 16S rRNA gene sequencing, and the functional gene abundances were predicted using PICRUSt. Although acetic acid negatively affected plant yield, no significant difference (p 0.05) was noted in the average nitrogen or phosphorus concentration. In terms of nutrient recovery, the bioponic systems still functioned well, although higher concentrations of acetic acid decreased plant yield and altered the bacterial communities in plant roots and chicken manure sediments. These data suggest that an acetic acid concentration of 500 mg/L or a longer loading interval is recommended for the effective operation of chicken manure and digestate-based bioponics.

Bioponics integrates the biological treatment of nutrient-rich waste streams with hydroponics. However, there are several challenges of bioponics, especially nutrient availability and qualities, which affect plant yield. In this study, chicken manure based-nutrient film technique bioponics was examined at manure loadings of 200, 300, and 400 g dry wt. per bioponic system (total of 18 plants). Bioponics effectively released nitrogen and phosphorus (total ammonia nitrogen of 5.8–8.0 mgN/L, nitrate of 7.0–11.2 mgN/L, and phosphate of 48.7–74.2 mgP/L) for efficient growth of lettuce (Lactuca sativa; total yield of 1208–2030 g wet wt. per 18 plants). Nitrogen and phosphorus use efficiencies were 35.1–41.8% and 6.8–8.0%, respectively, and were comparable to aquaponics. Next-generation sequencing was used to examine the microbial communities in digested chicken manure and plant roots in bioponics. Results showed that several microbial genera were associated with organic degradation (e.g., Nocardiopsis spp., Cellvibrio spp.), nitrification (Nitrospira spp.), phosphorus solubilization, and plant growth promotion (e.g., WD2101_soil_group, and Bacillus spp.). Nocardiopsis spp., Romboutsia spp. and Saccharomonospora spp. were found at high abundances and a high degree of co-occurrences among the microbiota, suggesting that the microbial organic decomposition to nitrogen and phosphorus release could be the key factors to achieve better nutrient recovery in bioponics.

This document it is established that 2 types of biogas anaerobic digester that usually found in developing country. First type is fixed dome type of anaerobic digester and secondly is floating drum biogas anaerobic digester. Both of this type have draw back that the anaerobic process is not completed with agitation process that yield low rate of biogas production. Other serious problem is the release of slurry cannot optimal. Some of the slurry will still remain stay in the anaerobic digester especially scum. To drain and cleaning the fixed dome or floating drum biogas anaerobic digester is mandatory to be done regularly that consume time and cost. The fixed dome types as well as floating drum type are usually not portable which cause no possibility to relocate in the new site. It is the purpose of this work to introduce portable biogas anaerobic digester that suitable for developing country with volume of digester around 500 liter of slurry. The requirement of agitator is facilitated, and the anaerobic digester is possible to be operated in batch system or continuous system. The material that is used for anaerobic digester is stainless steel 304 with tungsten inert gas welding technology that is used for the manufacturing. With this design the anaerobic digester are easy to be maintenance. The batch system can keep producing biogas until 52 day with total production of biogas around 3320 liters. The continuous system was conducted by releasing for about 5 liters slurry from the outlet and after that filled with new slurry with stirring with agitator was conducted for about 10 minutes for 3 times in a day (morning, noon, and evening). The result for continuous system is a linear biogas production with rate biogas production is around 51.7 liter/day (1550 liter/30days).

While rumen microorganisms are known to facilitate the hydrolysis of lignocellulosic substrates in anaerobic digestion (AD), it is unclear how rumen content can be used to maintain rumen microorgan...

Pharmaceuticalsare a diverse group of chemical compounds widely used for prevention and treatment of infectious diseases in both humans and animals. Pharmaceuticals, either in their original or metabolite form, find way into the wastewater treatment plants (WWTPs) from different sources. Recently, anaerobic membrane bioreactors (AnMBR) has received significant research attention for the treatment of pharmaceuticals in various wastewater streams. This review critically examines the behaviour and removal of a wide array of pharmaceuticals in AnMBR with primary focus on their removal efficiencies and mechanisms, critical influencing factors, and the microbial community structures. Subsequently, the inhibitory effects of pharmaceuticals on the performance of AnMBR and membrane fouling are critically discussed. Furthermore, the imperative role of membrane biofouling layer and its components in pharmaceuticals removal is highlighted. Finally, recent advancements in AnMBR configurations for membrane fouling control and enhanced pharmaceuticals removal are systemically discussed.

Ammonia stress is a commonly encountered issue in anaerobic digestion (AD) process when treating proteinaceous substrates. The enhanced relationship between syntrophic bacteria and methanogens triggered by interspecies electron transfer (IET) stimulation is one of the potential mechanisms for an improved methane yield from the AD plant under ammonia-stressed condition. There is, however, lack of synthesized information on the mechanistic understanding of IET facilitation in the ammonia-stressed AD processes. This review critically discusses recovery of AD system from ammonia-stressed condition, focusing on H

In the past decades, considerable attention has been directed toward anaerobic digestion (AD), which is an effective biological process for converting diverse organic wastes into biogas, volatile fatty acids (VFAs), biohydrogen, etc. The microbial bioprocessing takes part during AD is of substantial significance, and one of the crucial approaches for the deep and adequate understanding and manipulating it toward different products is process microbiology. Due to highly complexity of AD microbiome, it is critically important to study the involved microorganisms in AD. In recent years, in addition to traditional methods, novel molecular techniques and meta-omics approaches have been developed which provide accurate details about microbial communities involved AD. Better understanding of process microbiomes could guide us in identifying and controlling various factors in both improving the AD process and diverting metabolic pathway toward production of selective bio-products. This review covers various platforms of AD process that results in different final products from microbiological point of view. The review also highlights distinctive interactions occurring among microbial communities. Furthermore, assessment of these communities existing in the anaerobic digesters is discussed to provide more insights into their structure, dynamics, and metabolic pathways. Moreover, the important factors affecting microbial communities in each platform of AD are highlighted. Finally, the review provides some recent applications of AD for the production of novel bio-products and deals with challenges and future perspectives of AD.

An increasing attention has been paid to the secure and sustainable management of agricultural wastes, especially lignocellulosic biomass. Nanobubble water (NBW) contains 10

Municipal wastewater treatment which is associated with high energy consumption and excessive greenhouse gas (GHG) emissions, has been facing severe challenges toward carbon emissions. In this study, a high-rate activated sludge-two-stage vertical up-flow constructed wetland (HRAS-TVUCW) system was developed to reduce carbon emissions during municipal wastewater treatment. Through carbon management, optimized mass and energy flows were achieved, resulting in high treatment efficiency and low operational energy consumption. The carbon emission of the HRAS-TVUCW system (i.e., 0.21 kg carbon dioxide equivalent/m

In bioponics, although chicken manure is an efficient substrate for vegetable production and nitrogen recovery, it is often contaminated with high Cu and Zn levels, which could potentially cause bioaccumulation in plants and pose health risks. The objectives of this study were to assess nitrogen recovery in lettuce- and pak choi-based bioponics with Cu (50-150 mg/kg) and Zn (200-600 mg/kg) supplementation, as well as their bioaccumulation in plants, root microbial community, and health risk assessment. The supplementation of Cu and Zn did not affect nitrogen concentrations and plant growth (p 0.05) but reduced nitrogen use efficiency. Pak choi showed higher Cu and Zn bioconcentration factors than lettuce. Bacterial genera Ruminiclostridium and WD2101_soil_group in lettuce roots and Mesorhizobium in pak choi roots from Cu and Zn supplemented conditions were significantly higher (p 0.05) than controls, suggesting microbial biomarkers in plant roots from Cu and Zn exposure bioponics depended on plant type. Health risk assessment herein revealed that consumption of bioponic vegetables with Cu and Zn contamination does not pose long-term health risks (hazard index1) to children or adults, according to the US EPA. This study suggested that vegetable produced from chicken manure-based bioponics has low health risk in terms of Cu and Zn bioaccumulation and could be applied in commercial-scale system for nutrient recovery from organic waste to vegetable production; however, health risk from other heavy metals and xenobiotic compounds must be addressed.

This study investigated organic removal performance, characteristics of the membrane dynamics, membrane fouling and the effects of biological sulfate reduction during high-salinity (1.0%) and high-sulfate (150 mgSO42--S/L) wastewater treatment using a laboratory-scale upflow anaerobic sludge bed reactor integrated with cross-flow dynamic membrane modules. Throughout the operational period, dynamic membrane was formed rapidly (within 5-10 min) following each backwashing cycle (21-16 days), and the permeate turbidity of < 5-7 NTU was achieved with relatively high specific organic conversion (70-100 gTOC/kgVSS·d) and specific sulfate reduction (50-70 gSO42--S/kgVSS·d) rates. The sulfide from sulfate reduction can be reused for downstream autotrophic denitrification. 16S rRNA gene amplicon sequencing revealed that the microbial communities enriched in the sludge were different than those accumulated on the dynamic layer. Overall, this study demonstrates that the anaerobic dynamic membrane bioreactor coupled with sulfate reduction (SrDMBR) shows promising applicability in saline wastewater treatment.

Environmental contamination of heavy metals is now becoming increasingly a concern and a significant problem due to its harmful effects worldwide. The plant-meditated approach is encouraging to eliminate toxins avoiding side effects from polluted wastewater. For the development of appropriate plant species for the mechanisms of heavy metal absorption, transport, detoxification, identification, and signaling pathways would be important facts. Transporter genes like ATP-phosphoribosyl transferase (ATP-PRT), Yellow Stripe-like (YSL), NAS (nicotinamide synthase), SAMS (S-adenosyl-methionine synthetase), FER (ferritin Fe (III) binding), HMA (heavy metal ATPase), IREG (iron-regulated transporter), and proteins like cation diffusion facilitators (CDF), ZRT, IRT-like protein (ZIP), and natural resistance-associated macrophage protein (NRAMP) are active in heavy metal accumulation, translocalisation, sequestration, and resistance. Besides, chelating agents and metabolites can be used either to increase heavy metal bioavailability, which facilitates heavy metal accumulation in plants and further promote plant growth and fitness. This review paper addresses key roles and potential transporter genes and proteins for the remediation of heavy metals from hyperaccumulator plants. This review specifically focuses on the efficacy of transporter genes and proteins in hyperaccumulator plants in metal restoration, discussing the use of these plants for wastewater treatment processes.

Anaerobic mono- and co-digestion of coffee pulp (CP), cattle manure (CM), food waste (FW) and dewatered sewage sludge (DSS), were assessed using biochemical methane potential tests. The effects of two different inocula, anaerobically digested cattle manure (ADCM) and anaerobically digested waste activated sludge (ADWAS), and five different co-feedstock ratios for CP:CM and FW:DSS (1:0, 4:1, 2:1, 4:3, and 0:1) on specific methane yields were also evaluated. Mono-digestions of both CP and FW yielded the highest methane yield compared to the co-digestion ratios examined. Furthermore, no synergistic or antagonistic effect was observed for any of the co-digestion ratios tested. Nine different kinetic models (five conventional mono-digestion models and four co-digestion models) were compared and evaluated for both mono- and co-digestion studies. For CP:CM, cone and modified Gompertz with second order equation models were the best-fit for mono- and co-digestion systems, respectively, while for FW:DSS, superimposed model showed the best-fit for all systems.

In this study, we examined eight typical and widely detected pharmaceuticals (PhAs) removal in an anaerobic sulfate-reducing bacteria (SRB) sludge system (five antibiotics: sulfadiazine (SD), sulfamethoxazole (SMX), trimethoprim (TMP), ciprofloxacin (CIP) and enoxacin (ENO), and three nonsteroidal anti-inflammatory drugs (NSAIDs): ibuprofen (IBU), ketoprofen (KET) and diclofenac (DIC)). The results showed that the SRB sludge had the higher removal efficacy (20 to 90%) for antibiotics (SD, SMX, TMP, CIP and ENO) than NSAIDs (

Anaerobic digestion (AD) of lignocellulosic biomass has received significant attention for bioenergy production in recent years. However, hydrolysis is a rate-limiting in AD of such feedstock. In this study, effects of hydrothermal pretreatment of Napier grass, a model lignocellulosic biomass, on methane yield were examined through series of batch and semi-continuous studies. In batch studies, the highest methane yield of 248.2 ± 5.5 NmL CH4/g volatile solids (VS)added was obtained from the biomass pretreated at 175 °C, which was 35% higher than that from the unpretreated biomass. The biomass pretreated at 200 °C resulted in formation of 5-hydroxymethylfurfural and furfural, which significantly inhibited methanogenesis. In semi-continuous studies, digester fed with the biomass pretreated at 200 °C at organic loading rate (OLR) of 4 g VS/L.d resulted in digester failure. Thus, OLRsoluble/OLRtotal ratio

Antibiotics, the most frequently prescribed drugs of modern medicine, are extensively used for both human and veterinary applications. Antibiotics from different wastewater sources (e.g., municipal, hospitals, animal production, and pharmaceutical industries) ultimately are discharged into wastewater treatment plants. Sorption and biodegradation are the two major removal pathways of antibiotics during biological wastewater treatment processes. This review provides the fundamental insights into sorption mechanisms and biodegradation pathways of different classes of antibiotics with diverse physical-chemical attributes. Important factors affecting sorption and biodegradation behavior of antibiotics are also highlighted. Furthermore, this review also sheds light on the critical role of extracellular polymeric substances on antibiotics adsorption and their removal in engineered biological wastewater treatment systems. Despite major advancements, engineered biological wastewater treatment systems are only moderately effective (48-77%) in the removal of antibiotics. In this review, we systematically summarize the behavior and removal of different antibiotics in various biological treatment systems with discussion on their removal efficiency, removal mechanisms, critical bioreactor operating conditions affecting antibiotics removal, and recent innovative advancements. Besides, relevant background information including antibiotics classification, physical-chemical properties, and their occurrence in the environment from different sources is also briefly covered. This review aims to advance our understanding of the fate of various classes of antibiotics in engineered biological wastewater treatment systems and outlines future research directions.

Anaerobic digestion (AD) is a matured technology for waste (water) remediation/stabilization and bioenergy generation in the form of biogas. AD technology has several inherent benefits ranging from generating renewable energy, remediating waste (water), and reducing greenhouse gas emission to improving health/hygiene and the overall socio-economic status of rural communities in developing nations. In recent years, there has been a paradigm shift in applications of AD technology beyond biogas. This special issue (SI) entitled, “Anaerobic Digestion Beyond Biogas (ADBB-2021),” was conceptualized to incorporate some of the recent advances in AD in which the emphasis is beyond biogas, such as anaerobic biorefinery, chain elongation, treatment of micropollutants, toxicity and system stability, digestate as biofertilizer, bio-electrochemical systems, innovative bioreactors, carbon sequestration, biogas upgrading, microbiomes, waste (water) remediation, residues/waste pre-treatment, promoter addition, and modeling, process control, and automation, among others. This VSI: ADBB-2021 contains 53 manuscripts (14 critical reviews and 39 research). The key findings of each manuscript are briefly summarized here, which can serve as a valuable resource for AD researchers to learn of major advances in AD technology and identify future research directions.

Growing consumption of fossil reserves to meet the rising demand of energy has led to climate deterioration and simultaneous waste generation, urging modern society to find sustainable energy resource that can meet the growing energy demands and reduce greenhouse gas emissions and carbon footprints. In this aspect, hydrogen (H

Nanobubble technology has significant potential to improve the anaerobic digestion (AD) process by ameliorating the rate-limiting steps of hydrolysis and methanogenesis, as well as providing process stability by reducing sulfide and volatile fatty acid (VFA) levels. Nanobubbles (NB) can enhance substrate accessibility, digestibility, and enzymatic activity due to their minuscule size, high electrostatic interaction, and ability to generate reactive oxygen species. Air- and O2-NB can create a microaerobic environment for higher efficiency of the electron transport system, thereby reducing VFAs through enhanced facultative bacterial activity. Additionally, H2- and CO2-NB can improve hydrogenotrophic methanogenesis. Recently, several studies have employed NB technology in the AD process. There is, however, a lack of concise, synthesized information on NB applications to the AD process. This review provides an in-depth discussion on the NB-integrated AD process and the putative mechanisms involved. General discussions on other potential applications and future research directions are also provided.

Azo dye is the most versatile class of dyes used in the textile industry. Although the sulfidogenic process shows superiority in the removal of azo dye, the role of biogenic sulfide produced by sulfate-reducing bacteria (SRB) in the decolorization of azo dye is unclear. This study explored the mechanism of biogenic sulfide for removal of a model azo dye (Direct Red 81 (DR 81)) through biotic and abiotic batch tests with analysis of intermediates of the azo dye degradation. The results showed that biogenic sulfide produced from sulfate reduction directly cleaved two groups of azo bond (-N N-), thereby achieving decolorization. Moreover, the decolorization rate was enhanced by nearly 3-fold (up to 42 ± 1 mg/L-hr; removal efficiency > 99%) by adding an external carbon source or elevating the initial azo dye concentration. This study showed that biogenic sulfide plays an essential role in azo dye decolorization and provides a new avenue for the potential application of biogenic sulfide from the sulfidogenic system for the treatment of azo dye-laden wastewater.

Intermittent (every other day) microaerobic [picomolar oxygen by oxidation-reduction potential (ORP) set at +25 mV above anaerobic baseline] digestion of lignocellulosic biomass showed higher digestibility and better stability at a high organic loading rate (OLR) of 5 g volatile solids (VS)/L/d than that under strict anaerobic conditions. However, the microbial mechanisms supporting the delicate balance under microaeration remain underexplored. On the basis of our previous findings that microbial communities in replicate experiments were dominated by strains of the genus Proteiniphilum but contained diverse taxa of methanogenic archaea, here we recovered related genomes and reconstructed the putative metabolic pathways using a genome-centric metagenomic approach. The highly enriched Proteiniphilum strains were identified as efficient cellulolytic facultative bacterium, which directly degraded lignocellulose to carbon dioxide, formate, and acetate via aerobic respiration and anaerobic fermentation, alternatively. Moreover, high oxygen affinity cytochromes, bd-type terminal oxidases, in Proteiniphilum strains were found to be closely associated with such picomolar oxygen conditions, which has long been overlooked in anaerobic digestion. Furthermore, hydrogenotrophic methanogenesis was the prevalent pathway for methane production while Methanosarcina, Methanobrevibacter, and Methanocorpusculum were the dominant methanogens in the replicate experiments. Importantly, the two functional groups, namely cellulolytic facultative Proteiniphilum strains and methanogens, encoded various antioxidant enzymes. Energy-dependent reactive oxygen species (ROS) scavengers (superoxide reductase (SOR) and rubrerythrin (rbr) were ubiquitously present in different methanogenic taxa in response to replicate-specific ORP levels (-470, -450 and -475 mV). Collectively, cytochrome bd oxidase and ROS defenders may play roles in improving the digestibility and stability observed in intermittent microaerobic digestion.

Ibuprofen (IBU) is one of the frequently detected non-steroidal anti-inflammatory drugs (NSAIDs) in wastewater treatment plants (WWTPs) and aquatic environment. However, little is known about the effect of IBU and its biotransformation products (TPs) on different biological sludge systems and aquatic environment. The effects and toxicity of IBU and TPs on three biological sludge systems (i.e., activated sludge (AS), sulfate-reducing bacteria (SRB)-enriched sludge and anaerobic methanogenic (AnM) sludge systems) and aquatic environment were comprehensively evaluated through a long-term operation of three bioreactors and a series of batch experiments. Both of the SRB-enriched sludge and AnM sludge systems were not affected under a long-term exposure to IBU, based on removing organic carbon and sulfur and producing methane. This could be attributed to the high tolerance of functional microbes in the SRB-enriched sludge (e.g., genus Desulfobacter) and AnM sludge systems (e.g., genus Candidatus Methanomethylicus) for IBU. In contrast, IBU had some apparently inhibitory effects on the AS system, such as reduced organic removal efficiency and poor sludge settling. The analysis on microbial community revealed that IBU significantly inhibited the genera involved in organic degradation (e.g., genus Candidatus Competibacter) and also stimulated those genera (e.g., genus Brachymonas) to secret excess extracellular polymeric substances (EPS), which thus caused sludge bulking in the AS system. The toxicity of IBU and its TPs in the effluent of the AS system was also investigated with Vibrio fischeri bioluminescence inhibition tests and quantitative structure activity relationship (QSAR) analysis by ecological structure-activity relationship (ECOSAR) program. The results indicated that the AS system could effectively eliminate the acute toxicity of both IBU and TPs, but a potential chronic toxicity of IBU could still existed, which could be more harmful to aquatic organisms than that of its TPs. These findings provide an insight into the toxic effects of IBU and its TPs on biological sludge systems and ecosystem.

In recent years, aquaponics has generated significant attention for recovery of resources (vegetables/fruits) from aquaculture effluent. Aquaponics produces organic vegetables by recycling nutrients in aquaculture effluent under a symbiotic environment among fish, plants, and bacteria. Linking the understanding of nutrient recycling processes to the productions is critical for designing and operating an efficient aquaponics. Due to high nitrogen concentration in aquaponics and aquaculture/agriculture systems, nitrogen is a key element to be considered for optimizing aquaponics to maximize nutrient use efficiency and minimize the environmental impact associated with nitrogen release. In this chapter, the background of aquaponic food productions and principle of nitrogen recovery are presented together with the basics of biochemical nitrogen transformations, as applied to aquaponic systems. In this chapter, we link nitrogen transformations to biochemical processes in fish, bacteria, and plants (e.g., ammonification in fish, microbial metabolisms, plant growth, and nitrogen cycle). Furthermore, a design example that is based on the principle of nitrogen transformations is also provided. Modern methods for studying microbial community in aquaponics and growth equations for predicting the aquaponics productions are also briefly presented for further research. Overall, this chapter provides necessary backgrounds for aquaponic growers to start and operate an efficient aquaponics system with brief information for advancing research and development in aquaponics.

Population growth and unprecedented economic growth and urbanization, especially in low- and middle-income countries, coupled with extreme weather patterns, the high-environmental footprint of agricultural practices, and disposal-oriented waste management practices, require significant changes in the ways we produce food, feed and fuel, and manage enormous amounts of organic wastes. Farming insects such as the black soldier fly (BSF) (Hermetia illucens) on diverse organic wastes provides an opportunity for producing nutrient-rich animal feed, fuel, organic fertilizer, and biobased products with concurrent valorization of wastes. Inclusion of BSF larvae/pupae in the diets of poultry, fish, and swine has shown promise as a potential substitute of conventional feed ingredients such as soybean meal and fish meal. Moreover, the bioactive compounds such as antimicrobial peptides, medium chain fatty acids, and chitin and its derivatives present in BSF larvae/pupae, could also add values to the animal diets. However, to realize the full potential of BSF-based biorefining, more research and development efforts are necessary for scaling up the production and processing of BSF biomass using more mechanized and automated systems. More studies are also needed to ensure the safety of the BSF biomass grown on various organic wastes for animal feed (also food) and legalizing the feed application of BSF biomass to wider categories of animals. This critical review presents the current status of the BSF technology, identifies the research gaps, highlights the challenges towards industrial scale production, and provides future perspectives.

A large volume of solid and liquid waste is generated due to industrial and urban/suburban/agricultural activities. Management and handling of waste generated is nowadays burning issue for local authorities not only in urban areas, i.e., municipalities, but also in other regions in any country. With increasing urbanization and industrialization, generation of waste/wastewater appropriate disposal, treatment, and/or recycling are posing more challenges as the treatment and disposal costs huge amount in terms of money. However, conceiving the fact that “waste” word is placed wrongly and that it is a resource, resource recovery from wastes has emerged as thrust area of research and management as it offers huge environment and social sustainability potentials. Current researches globally are focusing on the recovery of various resources such as energy, bioproducts, nutrients, metals from waste/wastewater generated by anthropogenic activities, etc. This information needs to be discussed in the present context, and the future perspectives should be explored; most importantly, it should reveal current status, with state-of-the-art information and possibilities for technological exploitation. This chapter elaborates the recovery of various resources from solid and/or liquid waste.

The mitigation of greenhouse gas (GHG) emission is one of the major focuses of The Glasgow Climate Pact, a global agreement that is believed to accelerate climate action. Following the energy sector, industrial and agro-wastes are the major contributors to global GHG emission. With the rapid growth in population, affluence, and urbanization, the GHG emission from waste sector is likely to be further aggravated if timely measures are not taken to address this burning issue. Thus, a significant research and development efforts are being made in shifting conventional waste treatment approach to resource recovery from waste, incorporating a circular bioeconomy concept. There have been significant advances in technologies such as anaerobic digestion, composting, pyrolysis, algae farming, and microbial fuel cell for recovering resources from organic wastes. This virtual special issue (VSI), "Bioconversion of Waste-to-Resources (BWR-2021)", contains 25 manuscripts covering various aspects of wastes and residual biomass valorization to high value products, including development of new technologies, optimization of current technologies for more efficient utilization of wastes and residues. The key findings of each manuscript are briefly summarized here, which can serve as a valuable resource for researchers in the field of resource recovery from wastes.

Anaerobic digestion (AD) is widely adopted for remediating diverse organic wastes with simultaneous production of renewable energy and nutrient-rich digestate. AD process, however, suffers from instability, thereby adversely affecting biogas production. There have been significant efforts in developing strategies to control the AD process to maintain process stability and predict AD performance. Among these strategies, machine learning (ML) has gained significant interest in recent years in AD process optimization, prediction of uncertain parameters, detection of perturbations, and real-time monitoring. ML uses inductive inference to generalize correlations between input and output data, subsequently used to make informed decisions in new circumstances. This review aims to critically examine ML as applied to the AD process and provides an in-depth assessment of important algorithms (ANN, ANFIS, SVM, RF, GA, and PSO) and their applications in AD modeling. The review also outlines some challenges and perspectives of ML, and highlights future research directions.

Low economic gains from biogas drive research on shifting to volatile fatty acid (VFA) production during anaerobic sludge digestion. pH control and methanogenesis inhibition are widely used strategies for VFA production via anaerobic digestion of sludge. However, these strategies require perpetual dosing of chemicals, increasing cost and operation complexity. Here, we applied electrochemical pretreatment (EPT) (12 V/30 min) for VFA production during anaerobic sludge digestion. The underlying mechanisms of the VFA production induced by EPT were explored systematically through analyses of the changes in the EPT operation parameters, the sludge characteristics, and the microbial community structure and functional enzymes involving in the subsequent sludge digestion. EPT with carbon-based electrodes selectively inhibited methanogenesis by down-regulating heterodisulfide reductase without affecting enzymatic acidogenesis and hydrolysis, resulting in accumulation of VFAs (up to 389 ± 12 mg acetic acid equivalent/L). Propionate and acetate were, respectively enriched to 89 and 75% of the total VFAs after carbon- and graphite- EPT. Titanium-EPT produced lower levels of VFA; instead, biogas yield increased by ∼20%. We anticipate that EPT will advance VFA recovery from diverse organic wastes to meet the global challenge of resource supply and waste management.

Hydrothermal carbonization (HTC) provides a promising alternative to valorize food waste digestate (FWD) and avoid disposal issues. Although hydrochar derived from FWD alone had a low calorific content (HHV of 13.9 MJ kg-1), catalytic co-HTC of FWD with wet lignocellulosic biomass (e.g., wet yard waste; YW) and 0.5 M HCl exhibited overall superior attributes in terms of energy recovery (22.7 MJ kg-1), stable and comprehensive combustion behaviour, potential nutrient recovery from process water (2-fold higher N retention and 129-fold higher P extraction), and a high C utilization efficiency (only 2.4% C loss). In contrast, co-HTC with citric acid provided ∼3-fold higher autogenous pressure, resulting in a superior energy content of 25.0 MJ kg-1, but the high C loss (∼74%) compromised the overall environmental benefits. The results of this study established a foundation to fully utilize FWD and YW hydrochar for bioenergy application and resource recovery from the process water.

Exposure of a small amount of oxygen/air (microaeration) has been reported to benefit the anaerobic digestion (AD) process in enhancing hydrolysis, improving methane yield, stabilizing the process and scavenging hydrogen sulfide among others. The underlying mechanism of enhancing AD process via microaeration is the augmentation of activity and diversity of the microbial consortia that promotes syntrophic interactions among different microbial groups, thereby creating a more stable process. To design and implement a microaeration-based AD process, fundamental insights about the mechanism of the AD system at process, microbial and molecular levels must be fully explored. This review critically examines microaeration-based AD processes through our recent understandings of the effect of oxygen on microbial community structure, enzymatic, energetic, physiological, and biochemical aspects of the microbial-mediated process. Syntrophic interactions between hydrolytic, fermentative, sulfate reducing, syntrophic bacteria and methanogens under microaerobic conditions are examined to reveal putative mechanism and factors that need to be considered when implementing microaeration in AD process. Further studies are needed to better understand the microbial pathways and bioenergetics of the microaerobic AD process by adopting advanced molecular techniques such as metagenomics, transcriptomics, and proteomics.

Coke oven gas is considered as a potential hydrogen source for biogas bio-upgrading. In this study, the effects of CO on biomethanation performance and microbial community structure of hydrogenotrophic mixed cultures were investigated under thermophilic (55 °C) and extreme-thermophilic (70 °C) conditions. 5% (v/v) CO did not inhibit hydrogenotrophic methanogenesis during semi-continuous operation, and 83–97% CO conversion to CH4 was achieved. Methanothermobacter thermoautotrophicus was the dominant methanogen at both temperatures and was the main functional archaea associated with CO biomethanation. Specific methanogenic activity test results showed that long-term 5% CO acclimation shortened the lag phase from 5 h to 1 h at 55 °C and 15 h to 3 h at 70 °C. CO2 was the preferred carbon source over CO for hydrogenotrophic methanogens and CO consumption only started when CO2 was completely depleted. M. thermoautotrophicus dominated mixed cultures showed a great potential in simultaneous hydrogenotrophic methanogenesis and CO biomethanation.

In this study, hydrogenotrophic methanogenesis with respect to methanogenic activity and microbial structures under extreme-thermophilic conditions were examined, and compared with the conventional thermophilic condition. The hydrogenotrophic methanogens were successfully acclimated to the temperatures of 55, 65 and 70 °C. Although acclimation was slower at 65 and 70 °C, hydrogenotrophic methanogenesis remained fairly stable. High-throughput sequencing using 16S rRNA analysis showed that the higher temperatures resulted in single archaea community dominated by hydrogenotrophic Methanothermobacter. Moreover, the syntrophic bacteria changed from Coprothermobacter and Thermodesulfovibrio at 55 °C to Thermodesulfovibrio at 70 °C. Specific hydrogenotrophic methanogenic rate at 70 °C was 98.6 ± 4.2 Nml CH4/g VS/hr, which was over 4-folds higher than that 8at 55 °C. The lag phase under extreme-thermophilic conditions was longer than thermophilic condition, which was probably due to the archaeal structure with low diversity. Extreme-thermophilic condition resulted in a shift in methanogenesis pathway from acetoclastic methanogenesis to hydrogenotrophic methanogenesis with the enrichment of Methanothermobacter thermautotrophicus.

Aquaponics recycles nitrogen from nitrogen-rich aquaculture effluent into organic crops (fish and vegetables/fruits) in hydroponic grow beds. Fundamental understanding of nitrogen transformations in aquaponics is critically important to improve nitrogen use efficiency (NUE) within aquaponics systems and to reduce release of environmentally harmful effluent and gases. This study elucidated nitrogen transformations in floating-raft aquaponic systems using four plant species, namely lettuce (Lactuca sativa longifolia cv. Jericho), pak choi (Brassica rapa L. Chinensis), tomato (Lycopersicum esculentum), and chive (Allium schoenoprasum L.). Using nitrogen mass balance and 15N labeled nitrogen species, it was found that nitrate was the primary form of nitrogen assimilated by plants. Nitrification and denitrification occurred simultaneously in the aquaponic system, resulting in an inevitable nitrogen loss (22.3–29.3% of nitrogen input). Nitrogen loss via nitrifier denitrification (33.7–55.3%), which was stimulated by low dissolved oxygen (DO) levels (∼3.8 mg/L), and denitrification occurred simultaneously. Moreover, nitrogen loss from the aquaponic system in the form of nitrous oxide (N2O), a potent greenhouse gas, accounted up to 0.72–1.03% of the nitrogen input. Aerating biofilters to prevent the formation of anoxic zones reduced total nitrogen loss but did not affect N2O emission. This study suggests that increasing DO concentrations only by aeration does not improve NUE and reduce N2O emission simultaneously.

Aquaponics is a technology for food production (fish and vegetables/fruits) with concomitant remediation of nitrogen-rich aquaculture effluent. There is, however, a critical need to improve the nitrogen use efficiency (NUE) in aquaponics. Here, we employed quantitative polymerase chain reactions and next-generation sequencing to evaluate the bacterial communities and their links to nitrogen transformations for improving NUEs in four bench-scale plant-based floating-raft aquaponics (pak choi, lettuce, chive, and tomato) and three pH levels (7.0, 6.0, and 5.2). Low relative abundance of nitrifiers in plant roots and biofilters suggested nitrogen loss, which decreased NUE in aquaponics. Low pH level was a major factor that shifted the microbial communities and reduced the relative abundance of nitrifiers in aquaponic systems, leading to total ammonia nitrogen accumulation in recirculating water. In plant roots, the abundance of nitrite-oxidizing bacteria (e.g., Nitrospira spp.) did not decrease at low pH levels, suggesting the benefit of growing plants in aquaponics for efficient nitrification and improving NUE. These findings on microbial communities and nitrogen transformations provided complementary strategies to improve the performance of the aquaponics regarding water quality and extent of nutrient recovery from aquaculture effluent.

Extracellular polymeric substances (EPS) of microbial sludge play a crucial role in removal of organic micropollutants during biological wastewater treatment. In this study, we examined ciprofloxacin (CIP) removal in three parallel bench-scale reactors using aerobic sludge (AS), anaerobic sludge (AnS), and sulfate-reducing bacteria (SRB) sludge. The results showed that the SRB sludge had the highest specific CIP removal rate via adsorption and biodegradation. CIP removal by EPS accounted up to 35. 6 ± 1.4%, 23.7 ± 0.6%, and 25.5 ± 0.4% of total removal in AS, AnS, and SRB sludge systems, respectively, at influent CIP concentration of 1000 μg/L, which implied that EPS played a critical role in CIP removal. The binding mechanism of EPS on CIP adsorption in three sludge systems were further investigated using a series of batch tests. The results suggested that EPS of SRB sludge possessed stronger hydrophobicity (proteins/polysaccharides (PN/PS) ratio), higher availability of adsorption sites (binding sites ( n)), and higher binding strength (binding constant ( K

Anaerobic digestion (AD) of lignocellulosic biomass i.e. Napier grass (Pennisetum purpureum), was investigated via a series of batch and bench-scale experiments. Two semi-continuous bench-scale horizontal bioreactors were operated in parallel for nearly 300 days, and the reactors were able to handle the organic loading rate (OLR) up to 6 kg volatile solids (VS)/m3-d, which was among the highest OLR reported in the literature for lignocellulosic biomass. Hemicellulose was the main structural carbohydrate of lignocellulosic biomass per unit respective mass (dry weight) basis contributing to methane production. The cellulose- and lignin-rich digestate was further examined for its bioenergy potential via torrefaction and hydrothermal carbonization, and was found to have higher mass and energy yield compared with those of raw Napier grass. The produced solid char has energy content similar to bituminous coal with low ash content. Thus, this study provided a successful integration of anaerobic digestion with thermochemical conversion representing a biorefinery concept for lignocellulosic feedstocks.