31 results on '"Samoilys, M."'
Search Results
2. Key climate change stressors of marine ecosystems along the path of the East African coastal current
- Author
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Jacobs, Z.L., primary, Yool, A., additional, Jebri, F., additional, Srokosz, M., additional, van Gennip, S., additional, Kelly, S.J., additional, Roberts, M., additional, Sauer, W., additional, Queirós, A.M., additional, Osuka, K.E., additional, Samoilys, M., additional, Becker, A.E., additional, and Popova, E., additional
- Published
- 2021
- Full Text
- View/download PDF
3. Reply to: Shark mortality cannot be assessed by fishery overlap alone
- Author
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Queiroz, N., Humphries, N.E., Couto, A., Vedor, M., da Costa, I., Sequeira, A.M.M., Mucientes, G., Santos, A.M., Abascal, F.J., Abercrombie, D.L., Abrantes, K., Acuña-Marrero, D., Afonso, A.S., Afonso, P., Anders, D., Araujo, G., Arauz, R., Bach, P., Barnett, A., Bernal, D., Berumen, M.L., Lion, S.B., Bezerra, N.P.A., Blaison, A.V., Block, B.A., Bond, M.E., Bonfil, R., Bradford, R.W., Braun, C.D., Brooks, E.J., Brooks, A., Brown, J., Bruce, B.D., Byrne, M.E., Campana, S.E., Carlisle, A.B., Chapman, D.D., Chapple, T.K., Chisholm, J., Clarke, C.R., Clua, E.G., Cochran, J.E.M., Crochelet, E.C., Dagorn, L., Daly, R., Cortés, D.D., Doyle, T.K., Drew, M., Duffy, C.A.J., Erikson, T., Espinoza, E., Ferreira, L.C., Ferretti, F., Filmalter, J.D., Fischer, G.C., Fitzpatrick, R., Fontes, J., Forget, F., Fowler, M., Francis, M.P., Gallagher, A.J., Gennari, E., Goldsworthy, S.D., Gollock, M.J., Green, J.R., Gustafson, J.A., Guttridge, T.L., Guzman, H.M., Hammerschlag, N., Harman, L., Hazin, F.H.V., Heard, M., Hearn, A.R., Holdsworth, J.C., Holmes, B.J., Howey, L.A., Hoyos, M., Hueter, R.E., Hussey, N.E., Huveneers, C., Irion, D.T., Jacoby, D.M.P., Jewell, O.J.D., Johnson, R., Jordan, L.K.B., Joyce, W., Keating Daly, C.A., Ketchum, J.T., Klimley, A.P., Kock, A.A., Koen, P., Ladino, F., Lana, F.O., Lea, J.S.E., Llewellyn, F., Lyon, W.S., MacDonnell, A., Macena, B.C.L., Marshall, H., McAllister, J.D., Meÿer, M.A., Morris, J.J., Nelson, E.R., Papastamatiou, Y.P., Peñaherrera-Palma, C., Pierce, S.J., Poisson, F., Quintero, L.M., Richardson, A.J., Rogers, P.J., Rohner, C.A., Rowat, D.R.L., Samoilys, M., Semmens, J.M., Sheaves, M., Shillinger, G., Shivji, M., Singh, S., Skomal, G.B., Smale, M.J., Snyders, L.B., Soler, G., Soria, M., Stehfest, K.M., Thorrold, S.R., Tolotti, M.T., Towner, A., Travassos, P., Tyminski, J.P., Vandeperre, F., Vaudo, J.J., Watanabe, Y.Y., Weber, S.B., Wetherbee, B.M., White, T.D., Williams, S., Zárate, P.M., Harcourt, R., Hays, G.C., Meekan, M.G., Thums, M., Irigoien, X., Eguíluz, V.M., Duarte, C.M., Sousa, L.L., Simpson, S.J., Southall, E.J., Sims, D.W., Queiroz, N., Humphries, N.E., Couto, A., Vedor, M., da Costa, I., Sequeira, A.M.M., Mucientes, G., Santos, A.M., Abascal, F.J., Abercrombie, D.L., Abrantes, K., Acuña-Marrero, D., Afonso, A.S., Afonso, P., Anders, D., Araujo, G., Arauz, R., Bach, P., Barnett, A., Bernal, D., Berumen, M.L., Lion, S.B., Bezerra, N.P.A., Blaison, A.V., Block, B.A., Bond, M.E., Bonfil, R., Bradford, R.W., Braun, C.D., Brooks, E.J., Brooks, A., Brown, J., Bruce, B.D., Byrne, M.E., Campana, S.E., Carlisle, A.B., Chapman, D.D., Chapple, T.K., Chisholm, J., Clarke, C.R., Clua, E.G., Cochran, J.E.M., Crochelet, E.C., Dagorn, L., Daly, R., Cortés, D.D., Doyle, T.K., Drew, M., Duffy, C.A.J., Erikson, T., Espinoza, E., Ferreira, L.C., Ferretti, F., Filmalter, J.D., Fischer, G.C., Fitzpatrick, R., Fontes, J., Forget, F., Fowler, M., Francis, M.P., Gallagher, A.J., Gennari, E., Goldsworthy, S.D., Gollock, M.J., Green, J.R., Gustafson, J.A., Guttridge, T.L., Guzman, H.M., Hammerschlag, N., Harman, L., Hazin, F.H.V., Heard, M., Hearn, A.R., Holdsworth, J.C., Holmes, B.J., Howey, L.A., Hoyos, M., Hueter, R.E., Hussey, N.E., Huveneers, C., Irion, D.T., Jacoby, D.M.P., Jewell, O.J.D., Johnson, R., Jordan, L.K.B., Joyce, W., Keating Daly, C.A., Ketchum, J.T., Klimley, A.P., Kock, A.A., Koen, P., Ladino, F., Lana, F.O., Lea, J.S.E., Llewellyn, F., Lyon, W.S., MacDonnell, A., Macena, B.C.L., Marshall, H., McAllister, J.D., Meÿer, M.A., Morris, J.J., Nelson, E.R., Papastamatiou, Y.P., Peñaherrera-Palma, C., Pierce, S.J., Poisson, F., Quintero, L.M., Richardson, A.J., Rogers, P.J., Rohner, C.A., Rowat, D.R.L., Samoilys, M., Semmens, J.M., Sheaves, M., Shillinger, G., Shivji, M., Singh, S., Skomal, G.B., Smale, M.J., Snyders, L.B., Soler, G., Soria, M., Stehfest, K.M., Thorrold, S.R., Tolotti, M.T., Towner, A., Travassos, P., Tyminski, J.P., Vandeperre, F., Vaudo, J.J., Watanabe, Y.Y., Weber, S.B., Wetherbee, B.M., White, T.D., Williams, S., Zárate, P.M., Harcourt, R., Hays, G.C., Meekan, M.G., Thums, M., Irigoien, X., Eguíluz, V.M., Duarte, C.M., Sousa, L.L., Simpson, S.J., Southall, E.J., and Sims, D.W.
- Published
- 2021
4. Reply to: Caution over the use of ecological big data for conservation
- Author
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Queiroz, N., Humphries, N.E., Couto, A., Vedor, M., da Costa, I., Sequeira, A.M.M., Mucientes, G., Santos, A.M., Abascal, F.J., Abercrombie, D.L., Abrantes, K., Acuña-Marrero, D., Afonso, A.S., Afonso, P., Anders, D., Araujo, G., Arauz, R., Bach, P., Barnett, A., Bernal, D., Berumen, M.L., Lion, S.B., Bezerra, N.P.A., Blaison, A.V., Block, B.A., Bond, M.E., Bonfil, R., Braun, C.D., Brooks, E.J., Brooks, A., Brown, J., Byrne, M.E., Campana, S.E., Carlisle, A.B., Chapman, D.D., Chapple, T.K., Chisholm, J., Clarke, C.R., Clua, E.G., Cochran, J.E.M., Crochelet, E.C., Dagorn, L., Daly, R., Cortés, D.D., Doyle, T.K., Drew, M., Duffy, C.A.J., Erikson, T., Espinoza, E., Ferreira, L.C., Ferretti, F., Filmalter, J.D., Fischer, G.C., Fitzpatrick, R., Fontes, J., Forget, F., Fowler, M., Francis, M.P., Gallagher, A.J., Gennari, E., Goldsworthy, S.D., Gollock, M.J., Green, J.R., Gustafson, J.A., Guttridge, T.L., Guzman, H.M., Hammerschlag, N., Harman, L., Hazin, F. H.V., Heard, M., Hearn, A.R., Holdsworth, J.C., Holmes, B.J., Howey, L.A., Hoyos, M., Hueter, R.E., Hussey, N.E., Huveneers, C., Irion, D.T., Jacoby, D.M.P., Jewell, O.J.D., Johnson, R., Jordan, L.K.B., Joyce, W., Keating Daly, C.A., Ketchum, J.T., Klimley, A.P., Kock, A.A., Koen, P., Ladino, F., Lana, F.O., Lea, J.S.E., Llewellyn, F., Lyon, W.S., MacDonnell, A., Macena, B.C.L., Marshall, H., McAllister, J.D., Meÿer, M.A., Morris, J.J., Nelson, E.R., Papastamatiou, Y.P., Peñaherrera-Palma, C., Pierce, S.J., Poisson, F., Quintero, L.M., Richardson, A.J., Rogers, P.J., Rohner, C.A., Rowat, D.R.L., Samoilys, M., Semmens, J.M., Sheaves, M., Shillinger, G., Shivji, M., Singh, S., Skomal, G.B., Smale, M.J., Snyders, L.B., Soler, G., Soria, M., Stehfest, K.M., Thorrold, S.R., Tolotti, M.T., Towner, A., Travassos, P., Tyminski, J.P., Vandeperre, F., Vaudo, J.J., Watanabe, Y.Y., Weber, S.B., Wetherbee, B.M., White, T.D., Williams, S., Zárate, P.M., Harcourt, R., Hays, G.C., Meekan, M.G., Thums, M., Irigoien, X., Eguiluz, V.M., Duarte, C.M., Sousa, L.L., Simpson, S.J., Southall, E.J., Sims, D.W., Queiroz, N., Humphries, N.E., Couto, A., Vedor, M., da Costa, I., Sequeira, A.M.M., Mucientes, G., Santos, A.M., Abascal, F.J., Abercrombie, D.L., Abrantes, K., Acuña-Marrero, D., Afonso, A.S., Afonso, P., Anders, D., Araujo, G., Arauz, R., Bach, P., Barnett, A., Bernal, D., Berumen, M.L., Lion, S.B., Bezerra, N.P.A., Blaison, A.V., Block, B.A., Bond, M.E., Bonfil, R., Braun, C.D., Brooks, E.J., Brooks, A., Brown, J., Byrne, M.E., Campana, S.E., Carlisle, A.B., Chapman, D.D., Chapple, T.K., Chisholm, J., Clarke, C.R., Clua, E.G., Cochran, J.E.M., Crochelet, E.C., Dagorn, L., Daly, R., Cortés, D.D., Doyle, T.K., Drew, M., Duffy, C.A.J., Erikson, T., Espinoza, E., Ferreira, L.C., Ferretti, F., Filmalter, J.D., Fischer, G.C., Fitzpatrick, R., Fontes, J., Forget, F., Fowler, M., Francis, M.P., Gallagher, A.J., Gennari, E., Goldsworthy, S.D., Gollock, M.J., Green, J.R., Gustafson, J.A., Guttridge, T.L., Guzman, H.M., Hammerschlag, N., Harman, L., Hazin, F. H.V., Heard, M., Hearn, A.R., Holdsworth, J.C., Holmes, B.J., Howey, L.A., Hoyos, M., Hueter, R.E., Hussey, N.E., Huveneers, C., Irion, D.T., Jacoby, D.M.P., Jewell, O.J.D., Johnson, R., Jordan, L.K.B., Joyce, W., Keating Daly, C.A., Ketchum, J.T., Klimley, A.P., Kock, A.A., Koen, P., Ladino, F., Lana, F.O., Lea, J.S.E., Llewellyn, F., Lyon, W.S., MacDonnell, A., Macena, B.C.L., Marshall, H., McAllister, J.D., Meÿer, M.A., Morris, J.J., Nelson, E.R., Papastamatiou, Y.P., Peñaherrera-Palma, C., Pierce, S.J., Poisson, F., Quintero, L.M., Richardson, A.J., Rogers, P.J., Rohner, C.A., Rowat, D.R.L., Samoilys, M., Semmens, J.M., Sheaves, M., Shillinger, G., Shivji, M., Singh, S., Skomal, G.B., Smale, M.J., Snyders, L.B., Soler, G., Soria, M., Stehfest, K.M., Thorrold, S.R., Tolotti, M.T., Towner, A., Travassos, P., Tyminski, J.P., Vandeperre, F., Vaudo, J.J., Watanabe, Y.Y., Weber, S.B., Wetherbee, B.M., White, T.D., Williams, S., Zárate, P.M., Harcourt, R., Hays, G.C., Meekan, M.G., Thums, M., Irigoien, X., Eguiluz, V.M., Duarte, C.M., Sousa, L.L., Simpson, S.J., Southall, E.J., and Sims, D.W.
- Abstract
Our global analysis1 estimated the overlap and fishing exposure risk (FEI) using the space use of satellite-tracked sharks and longline fishing effort monitored by the automatic identification system (AIS)...
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- 2021
5. Key climate change stressors of marine ecosystems along the path of the east african coastal current
- Author
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Jacobs, Z.L., Yool, A., Jebri, F., Srokosz, M., van Gennip, S., Kelly, S.J., Roberts, M., Sauer, W., Queirós, A.M., Osuka, K.E., Samoilys, M., Becker, A.E., Popova, E., Jacobs, Z.L., Yool, A., Jebri, F., Srokosz, M., van Gennip, S., Kelly, S.J., Roberts, M., Sauer, W., Queirós, A.M., Osuka, K.E., Samoilys, M., Becker, A.E., and Popova, E.
- Abstract
For the countries bordering the tropical Western Indian Ocean (TWIO), living marine resources are vital for food security. However, this region has largely escaped the attention of studies investigating potential impacts of future climate change on the marine environment. Understanding how marine ecosystems in coastal East Africa may respond to various climatic stressors is vital for the development of conservation and other ocean management policies that can help to adapt to climate change impacts on natural and associated human systems. Here, we use a high-resolution (1/4°) ocean model, run under a high emission scenario (RCP 8.5) until the end of the 21st century, to identify key regionally important climate change stressors over the East African Coastal Current (EACC) that flows along the coasts of Kenya and Tanzania. We also discuss these stressors in the context of projections from lower resolution CMIP5 models. Our results indicate that the main drivers of dynamics and the associated ecosystem response in the TWIO are different between the two monsoon seasons. Our high resolution model projects weakening of the Northeast monsoon (December–February) winds and slight strengthening of the Southeast monsoon (May–September) winds throughout the course of the 21st century, consistent with CMIP5 models. The projected shallower mixed layers and weaker upwelling during the Northeast Monsoon considerably reduce the availability of surface nutrients and primary production. Meanwhile, primary production during the Southeast monsoon is projected to be relatively stable until the end of the century. In parallel, a widespread warming of up to 5 °C is projected year-round with extreme events such as marine heatwaves becoming more intense and prolonged, with the first year-long event projected to occur as early as the 2030s. This extreme warming will have significant consequences for both marine ecosystems and the coastal populations dependent on these marine resources. These
- Published
- 2021
6. The small pelagic fishery of the Pemba Channel, Tanzania: What we know and what we need to know for management under climate change
- Author
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Sekadende, B. Scott, L. Anderson, J. Aswani, S. Francis, J. Jacobs, Z. Jebri, F. Jiddawi, N. Kamukuru, A.T. Kelly, S. Kizenga, H. Kuguru, B. Kyewalyanga, M. Noyon, M. Nyandwi, N. Painter, S.C. Palmer, M. Raitsos, D.E. Roberts, M. Sailley, S.F. Samoilys, M. Sauer, W.H.H. Shayo, S. Shaghude, Y. Taylor, S.F.W. Wihsgott, J. Popova, E.
- Abstract
Small pelagic fish, including anchovies, sardines and sardinellas, mackerels, capelin, hilsa, sprats and herrings, are distributed widely, from the tropics to the far north Atlantic Ocean and to the southern oceans off Chile and South Africa. They are most abundant in the highly productive major eastern boundary upwelling systems and are characterised by significant natural variations in biomass. Overall, small pelagic fisheries represent about one third of global fish landings although a large proportion of the catch is processed into animal feeds. Nonetheless, in some developing countries in addition to their economic value, small pelagic fisheries also make an important contribution to human diets and the food security of many low-income households. Such is the case for many communities in the Zanzibar Archipelago and on mainland Tanzania in the Western Indian Ocean. Of great concern in this region, as elsewhere, is the potential impact of climate change on marine and coastal ecosystems in general, and on small pelagic fisheries in particular. This paper describes data and information available on Tanzania's small pelagic fisheries, including catch and effort, management protocols and socio-economic significance. Then, incorporating the rapidly improving understanding of the region's oceanography resulting from the application of remote sensing and oceanographic modelling, the paper undertakes the most complete assessment to date of the potential impacts of climate change on the small pelagic fishery of the Pemba Channel. Pathways of climate change impact are explored and crucial knowledge gaps, both in terms of the fishery itself and the wider ecosystem, are identified in order to guide future research activities. Although we analyse small pelagics in the specific context of the Pemba Channel, the key challenges identified in the analysis are likely to be relevant to many small pelagic fisheries in coastal nations heavily dependent on living marine resources. © 2020 The Authors
- Published
- 2020
7. A major ecosystem shift in coastal east African waters during the 1997/98 Super El Niño as detected using remote sensing data
- Author
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Jacobs, Z.L. Jebri, F. Srokosz, M. Raitsos, D.E. Painter, S.C. Nencioli, F. Osuka, K. Samoilys, M. Sauer, W. Roberts, M. Taylor, S.F.W. Scott, L. Kizenga, H. Popova, E.
- Abstract
Under the impact of natural and anthropogenic climate variability, upwelling systems are known to change their properties leading to associated regime shifts in marine ecosystems. These often impact commercial fisheries and societies dependent on them. In a region where in situ hydrographic and biological marine data are scarce, this study uses a combination of remote sensing and ocean modelling to show how a stable seasonal upwelling off the Kenyan coast shifted into the territorial waters of neighboring Tanzania under the influence of the unique 1997/98 El Niño and positive Indian Ocean Dipole event. The formation of an anticyclonic gyre adjacent to the Kenyan/Tanzanian coast led to a reorganization of the surface currents and caused the southward migration of the Somali-Zanzibar confluence zone and is attributed to anomalous wind stress curl over the central Indian Ocean. This caused the lowest observed chlorophyll-a over the North Kenya banks (Kenya), while it reached its historical maximum off Dar Es Salaam (Tanzanian waters). We demonstrate that this situation is specific to the 1997/98 El Niño when compared with other the super El-Niño events of 1972,73, 1982-83 and 2015-16. Despite the lack of available fishery data in the region, the local ecosystem changes that the shift of this upwelling may have caused are discussed based on the literature. The likely negative impacts on local fish stocks in Kenya, affecting fishers' livelihoods and food security, and the temporary increase in pelagic fishery species' productivity in Tanzania are highlighted. Finally, we discuss how satellite observations may assist fisheries management bodies to anticipate low productivity periods, and mitigate their potentially negative economic impacts. © 2020 by the authors.
- Published
- 2020
8. Movement in a large predatory fish: coral trout, Plectropomus leopardus (Pisces: Serranidae), on Heron Reef, Australia
- Author
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Samoilys, M. A.
- Published
- 1997
- Full Text
- View/download PDF
9. Global spatial risk assessment of sharks under the footprint of fisheries
- Author
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Queiroz, N., Humphries, N.E., Couto, A., Vedor, M., da Costa, I., Sequeira, A.M.M., Mucientes, G., Santos, A.M., Abascal, F.J., Abercrombie, D.L., Abrantes, K., Acuña-Marrero, D., Afonso, A.S., Afonso, P., Anders, D., Araujo, G., Arauz, R., Bach, P., Barnett, A., Bernal, D., Berumen, M.L., Bessudo Lion, S., Bezerra, N.P.A., Blaison, A.V., Block, B.A., Bond, M.E., Bonfil, R., Bradford, R.W., Braun, C.D., Brooks, E.J., Brooks, A., Brown, J., Bruce, B.D., Byrne, M.E., Campana, S.E., Carlisle, A.B., Chapman, D.D., Chapple, T.K., Chisholm, J., Clarke, C.R., Clua, E.G., Cochran, J.E.M., Crochelet, E.C., Dagorn, L., Daly, R., Cortés, D.D., Doyle, T.K., Drew, M., Duffy, C.A.J., Erikson, T., Espinoza, E., Ferreira, L.C., Ferretti, F., Filmalter, J.D., Fischer, G.C., Fitzpatrick, R., Fontes, J., Forget, F., Fowler, M., Francis, M.P., Gallagher, A.J., Gennari, E., Goldsworthy, S.D., Gollock, M.J., Green, J.R., Gustafson, J.A., Guttridge, T.L., Guzman, H.M., Hammerschlag, N., Harman, L., Hazin, F.H.V., Heard, M., Hearn, A.R., Holdsworth, J.C., Holmes, B.J., Howey, L.A., Hoyos, M., Hueter, R.E., Hussey, N.E., Huveneers, C., Irion, D.T., Jacoby, D.M.P., Jewell, O.J.D., Johnson, R., Jordan, L.K.B., Jorgensen, S.J., Joyce, W., Keating Daly, C.A., Ketchum, J.T., Klimley, A.P., Kock, A.A., Koen, P., Ladino, F., Lana, F.O., Lea, J.S.E., Llewellyn, F., Lyon, W.S., MacDonnell, A., Macena, B.C.L., Marshall, H., McAllister, J.D., McAuley, R., Meÿer, M.A., Morris, J.J., Nelson, E.R., Papastamatiou, Y.P., Patterson, T.A., Peñaherrera-Palma, C., Pepperell, J.G., Pierce, S.J., Poisson, F., Quintero, L.M., Richardson, A.J., Rogers, P.J., Rohner, C.A., Rowat, D.R.L., Samoilys, M., Semmens, J.M., Sheaves, M., Shillinger, G., Shivji, M., Singh, S., Skomal, G.B., Smale, M.J., Snyders, L.B., Soler, G., Soria, M., Stehfest, K.M., Stevens, J.D., Thorrold, S.R., Tolotti, M.T., Towner, A., Travassos, P., Tyminski, J.P., Vandeperre, F., Vaudo, J.J., Watanabe, Y.Y., Weber, S.B., Wetherbee, B.M., White, T.D., Williams, S., Zárate, P.M., Harcourt, R., Hays, G.C., Meekan, M.G., Thums, M., Irigoien, X., Eguíluz, V.M., Duarte, C.M., Sousa, L.L., Simpson, S.J., Southall, E.J., Sims, D.W., Queiroz, N., Humphries, N.E., Couto, A., Vedor, M., da Costa, I., Sequeira, A.M.M., Mucientes, G., Santos, A.M., Abascal, F.J., Abercrombie, D.L., Abrantes, K., Acuña-Marrero, D., Afonso, A.S., Afonso, P., Anders, D., Araujo, G., Arauz, R., Bach, P., Barnett, A., Bernal, D., Berumen, M.L., Bessudo Lion, S., Bezerra, N.P.A., Blaison, A.V., Block, B.A., Bond, M.E., Bonfil, R., Bradford, R.W., Braun, C.D., Brooks, E.J., Brooks, A., Brown, J., Bruce, B.D., Byrne, M.E., Campana, S.E., Carlisle, A.B., Chapman, D.D., Chapple, T.K., Chisholm, J., Clarke, C.R., Clua, E.G., Cochran, J.E.M., Crochelet, E.C., Dagorn, L., Daly, R., Cortés, D.D., Doyle, T.K., Drew, M., Duffy, C.A.J., Erikson, T., Espinoza, E., Ferreira, L.C., Ferretti, F., Filmalter, J.D., Fischer, G.C., Fitzpatrick, R., Fontes, J., Forget, F., Fowler, M., Francis, M.P., Gallagher, A.J., Gennari, E., Goldsworthy, S.D., Gollock, M.J., Green, J.R., Gustafson, J.A., Guttridge, T.L., Guzman, H.M., Hammerschlag, N., Harman, L., Hazin, F.H.V., Heard, M., Hearn, A.R., Holdsworth, J.C., Holmes, B.J., Howey, L.A., Hoyos, M., Hueter, R.E., Hussey, N.E., Huveneers, C., Irion, D.T., Jacoby, D.M.P., Jewell, O.J.D., Johnson, R., Jordan, L.K.B., Jorgensen, S.J., Joyce, W., Keating Daly, C.A., Ketchum, J.T., Klimley, A.P., Kock, A.A., Koen, P., Ladino, F., Lana, F.O., Lea, J.S.E., Llewellyn, F., Lyon, W.S., MacDonnell, A., Macena, B.C.L., Marshall, H., McAllister, J.D., McAuley, R., Meÿer, M.A., Morris, J.J., Nelson, E.R., Papastamatiou, Y.P., Patterson, T.A., Peñaherrera-Palma, C., Pepperell, J.G., Pierce, S.J., Poisson, F., Quintero, L.M., Richardson, A.J., Rogers, P.J., Rohner, C.A., Rowat, D.R.L., Samoilys, M., Semmens, J.M., Sheaves, M., Shillinger, G., Shivji, M., Singh, S., Skomal, G.B., Smale, M.J., Snyders, L.B., Soler, G., Soria, M., Stehfest, K.M., Stevens, J.D., Thorrold, S.R., Tolotti, M.T., Towner, A., Travassos, P., Tyminski, J.P., Vandeperre, F., Vaudo, J.J., Watanabe, Y.Y., Weber, S.B., Wetherbee, B.M., White, T.D., Williams, S., Zárate, P.M., Harcourt, R., Hays, G.C., Meekan, M.G., Thums, M., Irigoien, X., Eguíluz, V.M., Duarte, C.M., Sousa, L.L., Simpson, S.J., Southall, E.J., and Sims, D.W.
- Abstract
Brucellosis is a highly contagious zoonosis affecting humans and a wide range of domesticated and wild animal species. An important element for effective disease containment is to improve knowledge, attitudes and practices (KAP) of afflicted communities. This study aimed to assess the KAP related to brucellosis at the human–animal interface in an endemic area of Egypt and to identify the risk factors for human infection. A matched case–control study was conducted at the central fever hospitals located in six governorates in northern Egypt. Face‐to‐face interviews with cases and controls were conducted using a structured questionnaire. In total, 40.7% of the participants owned farm animals in their households. The overall mean practice score regarding animal husbandry, processing and consumption of milk and dairy products were significantly lower among cases compared with controls (−12.7 ± 18.1 vs. 0.68 ± 14.2, respectively; p < .001). Perceived barriers for notification of animal infection/abortion were predominate among cases and positively correlated with participants’ education. The predictors of having brucellosis infection were consumption of unpasteurized milk or raw dairy products and practicing animal husbandry. Applying protective measures against infection significantly reduced its risk. A model predicting risk factors for brucellosis among those who own animal showed that frequent abortions per animal increased the chance for brucellosis infection among human cases by 50‐fold (95% CI: 8.8–276.9), whereas the use of protective measures in animal care reduced the odds (OR = 0.11 [95% CI: 0.03–0.45]). In conclusion, consumption of unprocessed dairy products was equally important as contact with infected/aborted animals as major risk factors for Brucella spp. infection among humans in Egypt. There is poor knowledge, negative attitudes and risky behaviours among villagers which can perpetuate the risk of brucellosis transmission at the human–animal interface.
- Published
- 2019
10. Coral Reef Monitoring, Reef Assessment Technologies, and Ecosystem-Based Management
- Author
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Obura, David O, Aeby, Greta, Amornthammarong, Natchanon, Appeltans, Ward, Bax, Nicholas, Bishop, Joe, Brainard, Russell E, Chan, Samuel, Fletcher, Pamela, Gordon, Timothy A C, Gramer, L, Gudka, M, Halas, J, Hendee, J, Hodgson, G, Huang, D, Jankulak, M, Jones, A, Kimura, T, Levy, J, Miloslavich, P, Chou, L M, Muller-Karger, F, Osuka, K, Samoilys, M, Simpson, S D, Tun, K, Wongbusarakum, S, Obura, David O, Aeby, Greta, Amornthammarong, Natchanon, Appeltans, Ward, Bax, Nicholas, Bishop, Joe, Brainard, Russell E, Chan, Samuel, Fletcher, Pamela, Gordon, Timothy A C, Gramer, L, Gudka, M, Halas, J, Hendee, J, Hodgson, G, Huang, D, Jankulak, M, Jones, A, Kimura, T, Levy, J, Miloslavich, P, Chou, L M, Muller-Karger, F, Osuka, K, Samoilys, M, Simpson, S D, Tun, K, and Wongbusarakum, S
- Abstract
Coral reefs are exceptionally biodiverse and human dependence on their ecosystem services is high. Reefs experience significant direct and indirect anthropogenic pressures, and provide a sensitive indicator of coastal ocean health, climate change, and ocean acidification, with associated implications for society. Monitoring coral reef status and trends is essential to better inform science, management and policy, but the projected collapse of reef systems within a few decades makes the provision of accurate and actionable monitoring data urgent. The Global Coral Reef Monitoring Network has been the foundation for global reporting on coral reefs for two decades, and is entering into a new phase with improved operational and data standards incorporating the Essential Ocean Variables (EOVs) (www.goosocean.org/eov) and Framework for Ocean Observing developed by the Global Ocean Observing System. Three EOVs provide a robust description of reef health: hard coral cover and composition, macro-algal canopy cover, and fish diversity and abundance. A data quality model based on comprehensive metadata has been designed to facilitate maximum global coverage of coral reef data, and tangible steps to track capacity building. Improved monitoring of events such as mass bleaching and disease outbreaks, citizen science, and socio-economic monitoring have the potential to greatly improve the relevance of monitoring to managers and stakeholders, and to address the complex and multi- dimensional interactions between reefs and people. A new generation of autonomous vehicles (underwater, surface, and aerial) and satellites are set to revolutionize and vastly expand our understanding of coral reefs. Promising approaches include Structure from Motion image processing, and acoustic techniques. Across all systems, curation of data in linked and open online databases, with an open data culture to maximize benefits from data integration, and empowering users to take action, are priorities. Acti
- Published
- 2019
11. Complex transboundary movements of marine megafauna in the Western Indian Ocean
- Author
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Barkley, A. N., primary, Gollock, M., additional, Samoilys, M., additional, Llewellyn, F., additional, Shivji, M., additional, Wetherbee, B., additional, and Hussey, N. E., additional
- Published
- 2019
- Full Text
- View/download PDF
12. Linking the densities of fish functional groups and developmental stages to benthic structure
- Author
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Osuka, K., Samoilys, M., Obura, D., Kochzius, M., and Vanreusel, A.
- Published
- 2014
13. Linking the densities of coral associated fish functional groups to the benthic structure
- Author
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Osuka, K., Kochzius, M., Vanreusel, A., Obura, D., and Samoilys, M.
- Published
- 2014
14. Mahe, Seychelles
- Author
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Samoilys, M., Maina, G., Church, J., Mibei, B., Monjane, M., Shah, A., Mutta, D., and Pabari, M.
- Subjects
Surface temperature ,Sea level changes ,Global warming ,Mangroves ,Greenhouse effect - Abstract
Global change is defined here for this review as changes caused by increasing greenhouse gas emissions resulting in a high CO2 world and the direct and indirect changes that ensue. Increasing green house gas emissions are causing three major impacts on the ocean: warming sea surface temperature (SST), ocean acidification and deoxygenation (Turley et al 2011). The latter two are poorly understood at present, particularly in Eastern Africa. Secondary impacts include sea level rise due to melting polar ice caps. Coral bleaching and death caused by SST rise has been extensively studied and measured (HoeghGuldberg 1999; Hughes et al. 2003), including in the WIO (Obura 2005, McClanahan 2009), with likely ecosystem phase shifts as coral reefs become dominated by macroalgae (brown algae such as Turbinaria, Sargassum spp.) (Bellwood et al. 2004; Hughes et al. 2005). Ocean acidification is likely to have enormous impacts on marine resources and hence fisheries (Turley et al. 2011), as ocean chemistry is changed and thus any marine organisms that rely on Ph sensitive chemical reactions will be affected. This field is still relatively new and early reports predict trophic level shifts as organisms with calcium carbonate skeletons, e.g molluscs, corals, are compromised. Deoxygenation is caused by ocean warming (oxygen becomes less soluble) which will result in less growth of most marine organisms and a shift to low oxygen tolerant organisms, often microorganisms. Coastal environments and people are also undergoing changes that are directly related to human pressures caused by development and other activities. These include increasing population, mechanisation (eg in fisheries), industrialisation (eg ports and coastal cities), pollution, and extraction of oil and gas. Published
- Published
- 2013
15. Social, Economic and Environmental Impacts of Beach Seining In Kenya - an Information Review and Field Study - Final Report
- Author
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Signa, D., Tuda, P., and Samoilys, M.
- Subjects
Fishery surveys ,Stock assessment ,Fishery management ,Fishery economics ,Socioeconomic aspects ,Coastal Oceans Research and Development in Indian Ocean - East Africa (CORDIO EA) ,Seining ,Environment management ,Landing statistics - Abstract
In Kenya beach seines were prohibited through Fisheries Department legislation in 2001. Despite this ban, and the authorities’ attempts to enforce it, the beach seine fishery is still commonly used both at the Coast and in Lake Victoria; at the Coast the use of beach seines is increasing. Attempts to replace the beach seines with other gear have proved to be not as effective as hoped. In order to gain a better understanding of beach seining in the country, the root causes for its continued use and the difficulties in enforcing the ban, the newly established Ministry of Fisheries Development has requested FAO to include Kenya in the Global Study on Beach Seining currently being conducted by the Fisheries and Aquaculture Department of Rome Headquarters. From January to May 2008, the NGO Coastal Oceans Research and Development – Indian Ocean (CORDIO) East Africa has carried out the study with the financial support of the FAO Sub Regional Office for Eastern Africa based in Addis Ababa. In line with the term of reference of the study, a field survey has been undertaken in five landing sites (four in Coast Province and two in Nyanza Province) using participatory rural appraisal techniques and with the direct involvement of the local staff of the Fisheries Department. The follwing summarises the key findings and recommendations. Fishers from both Lake Victoria and the Coast were well aware of the negative impacts caused by beach seining operations. The most notable examples cited by both groups of fishers was the destruction of fish breeding ground habitats and the capture of juveniles. These were caused by the bottom dragging deployment method used to haul the nets, and the fine mesh, respectively. The most important positive impact of beach seining in both locations was income generation and employment leading also to food security from the consumption of part of the catches. In fact the catch sharing arrangements ensured that most of the fishing community benefit from the beach seine fishery. In addition, in both locations, the role of youth and women, the first especially during beach seining operations, the second more in marketing and processing of the catches was found to be very important. Within the scope of the present study it was not possible to measure the total number of households involved in beach seining, but for the Coast the total number of fishers was estimated to be anywhere between 11,000 and 18,000 out of a total 65,000 artisanal fishers. At Lake Victoria there are estimated to be 4,676 beach seine fishers in Suba District where the field study was done. This District accounts for around 51% of beach seine fishers in the Lake, therefore a total of around 9,400 beach seine fishers may be operating in Lake Victoria (Kenyan waters). Dependency on this gear extends further if the following figures are used: 186,336 people are enumerated to depend on fishing and fishery related activities for their livelihood in Suba District. Using the rough calculation of 30% are beach seine related, this gives an overall figure of 112,000 for the whole Lake. Thus in total, in Kenya, probably around 20,000 fishers are using beach seines, and at least a further 200,000 people may be dependent on this gear for their food and livelihoods. The use of the beach seine has persisted in both locations, despite the ban and despite the level of enforcement being higher in Lake Victoria than at the Coast. Beach seine use has increased over the last two years at the Coast. The major difference among the two case studies is that the majority of fishers at the Coast were driven to the beach seine fishery due to a lack of alternatives, while fishers in Lake Victoria are attracted to the beach seine gear due to the rich Nile perch fishery associated with the gear and the ready market that is readily available for the landed fish. The following management recommendations are proposed as temporary measures for the immediate term to address the difficulties in enforcement. They are put forward for discussion and consultation, particularly with the policy and management agency (FiD) and also the fishers themselves. We propose an iterative approach whereby options are put forward by different stakeholders and are then discussed and consensus reached on the most appropriate way forward. Published
- Published
- 2008
16. Comparisons of abundance of coral reef fish: catch and effort surveys vs visual census.
- Author
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Leqata, J., Samoilys, M. A., Connell, S. D., and Lincoln Smith, M. P.
- Subjects
- *
FISHERY management , *SAMPLING (Process) , *ICHTHYOLOGY , *BIOMASS , *CORAL reefs & islands - Abstract
Catch per unit effort (CPUE) in fisheries science and visual counts in marine ecology are widely used to provide estimates of relative abundance. Concurrent use of these techniques therefore offers an opportunity for cross-validation. This study compares CPUE to underwater visual census (UVC) estimates of relative species abundance in a multispecies fishery: coral-reef fish in the Solomon Islands. Multivariateanalyses showed large differences between CPUE and UVC estimates of abundance. The families Acanthuridae and Scaridae tended to be the primary cause of differences between the techniques when the full assemblage of fish was analysed. However, the relationship between CPUE and UVC did not improve when these families were excluded from the dataset and the analyses repeated on families (Serranidae, Lutjanidae, Lethrinidae) caught by the predominant gear type, handlining. This result highlights the point that the choice and use of particular methods require careful consideration in conjunction with the nature of factors being investigated. Many problems of sampling are specific to particular methods and some investigations may benefit from a more pluralistic approach. [ABSTRACT FROM AUTHOR]
- Published
- 1998
17. A Survey of the Coral Reef Fish Communities on the Kenyan Coast
- Author
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Samoilys, M.
- Subjects
Coral reefs ,fungi ,technology, industry, and agriculture ,Reef fish ,population characteristics ,Fishery surveys ,social sciences ,Sedimentation ,geographic locations - Abstract
Underwater censuses were used to measure species richness, abundance, and biomass of coral reef fish at nineteen reef slope study sites on the Kenyan coast, in 1987/1988. The survey was designed to examine the structure of the coral reef fish communities in relation to protection, fishing, sediment run-off from rivers, sea urchins, and collecting for the aquarium trade. A further twelve reefs were studied, but no censuses were carried out due to poor visibility or a lack of coral substrate. While species richness was highest in Marine National Parks where no fishing or collecting is allowed, the same was not true for fish abundance, or for biomass of commercially important fish. Some of the highest densities and weights of fish were recorded from the Marine National Reserves where traditional fishing methods are allowed. Standing stocks (biomass) of commercially important fish were negatively correlated with fishing intensity, and localized overfishing was evident near centres of high human populations. On the sparsely populated northern coastline, non-coralline reefs support exceptionally high standing stocks, due to minimal fishing pressure, and possibly a greater input of nutrients. Areas with higher fishing intensities had smaller standing stocks but not comparably smaller abundances. This suggests that more intense fishing is reducing average fish size. In genera] the results indicate that overfishing is not a major problem on Kenya's reef slopes. Two factors, siltation from rivers and dynamite "fishing" have a major impact on the fish communities. Reefs badly damaged from dynamiting in the Shimoni area, including Mako Kokwe in the Kisite Marine National Park, have negligible amounts of living hard coral and are characterised by a low species richness of fish, and exceptionally low densities of fish. For example the biomass of commercially important fish at Mwamba Midjira, which has been severely damaged by dynamiting, was only one tenth of the biomass recorded at Kisite, a neighbouring reef where no dynamiting occurs. Malindi Marine National Park has been subjected to a heavy influx of sediment from the Sabaki river since the early seventies. Coral die-off was evident, and densities and biomass of fish were of a similar magnitude to dynamited reefs, despite the prohibition of all fishing and collecting for the last 20 years. Similarly, coral die-off and sedimentation was apparent at survey sites close to the Tana river mouth, where fish censuses were not possible due to high silt content in the water. No correlation between sea urchin densities and predatory fish (15 species) densities was detected, suggesting that high fishing pressure is not responsible for high densities of sea urchins. High densities of sea urchins were observed on damaged (e.g. from dynamiting) reefs; possibly urchin survival is enhanced in the absence of corals. The total abundance of fish collected for the aquarium trade (48 species) did not differ significantly between a protected site and a site where collecting occurs, suggesting that collecting aquaria fish is not depleting stocks. However, several collectors use methods that are destructive to the reef substrate. In summary, it is clear that the effects of sediment offload from rivers and the use of dynamite far outweigh the effects of protective management and fishing on Kenya's coral reef fish communities. In the face of these impacts, marine park status is no guarantee that a high abundance and biomass of reef fish will be maintained, as exemplified by Malindi and Mako Kokwe Marine National Park sites. Standing stock estimates of commercially important reef fish are high in several reef areas where fishing pressure is low, except where sedimentation and dynamiting occurs. These two major problems have long been recognised (IUCN/UNEP 1985), but no policies have arrested their destructive effects. For the future of Kenya's coral reef fish, conservation action must address these issues. Published
- Published
- 1988
18. MONITORING THE REPLENISHMENT OF CORAL TROUT (PISCES, SERRANIDAE) POPULATIONS
- Author
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Peter Doherty, Fowler, A. J., Samoilys, M. A., and Harris, D. A.
19. Overfishing and climate change elevate extinction risk of endemic sharks and rays in the southwest Indian Ocean hotspot.
- Author
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Pollom RA, Cheok J, Pacoureau N, Gledhill KS, Kyne PM, Ebert DA, Jabado RW, Herman KB, Bennett RH, da Silva C, Fernando S, Kuguru B, Leslie RW, McCord ME, Samoilys M, Winker H, Fennessy ST, Pollock CM, Rigby CL, and Dulvy NK
- Subjects
- Animals, Indian Ocean, Fisheries, Ecosystem, Sharks physiology, Climate Change, Extinction, Biological, Conservation of Natural Resources, Endangered Species, Skates, Fish
- Abstract
Here, we summarise the extinction risk of the sharks and rays endemic to coastal, shelf, and slope waters of the southwest Indian Ocean and adjacent waters (SWIO+, Namibia to Kenya, including SWIO islands). This region is a hotspot of endemic and evolutionarily distinct sharks and rays. Nearly one-fifth (n = 13 of 70, 18.6%) of endemic sharks and rays are threatened, of these: one is Critically Endangered, five are Endangered, and seven are Vulnerable. A further seven (10.0%) are Near Threatened, 33 (47.1%) are Least Concern, and 17 (24.3%) are Data Deficient. While the primary threat is overfishing, there are the first signs that climate change is contributing to elevated extinction risk through habitat reduction and inshore distributional shifts. By backcasting their status, few endemic species were threatened in 1980, but this changed soon after the emergence of targeted shark and ray fisheries. South Africa has the highest national conservation responsibility, followed by Mozambique and Madagascar. Yet, while fisheries management and enforcement have improved in South Africa over recent decades, substantial improvements are urgently needed elsewhere. To avoid extinction and ensure robust populations of the region's endemic sharks and rays and maintain ecosystem functionality, there is an urgent need for the strict protection of Critically Endangered and Endangered species and sustainable management of Vulnerable, Near Threatened, and Least Concern species, underpinned by species-level data collection and reduction of incidental catch., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2024 Pollom et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
- Published
- 2024
- Full Text
- View/download PDF
20. Depth and habitat are important drivers of abundance for predatory reef fish off Pemba Island, Tanzania.
- Author
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Osuka KE, Stewart BD, Samoilys M, McClean CJ, Musembi P, Yahya S, Hamad AR, and Mbugua J
- Subjects
- Animals, Coral Reefs, Fishes, Tanzania, Water, Anthozoa, Ecosystem
- Abstract
Coral reefs across the world face significant threats from fishing and climate change, which tends to be most acute in shallower waters. This is the case off Pemba Island, Tanzania, yet the effects of these anthropogenic stressors on the distribution and abundance of economically and ecologically important predatory reef fish, including how they vary with depth and habitat type, is poorly understood. Thus, we deployed 79 baited remote underwater videos (BRUVs) in variable water depths and habitats off Pemba Island, and modeled the effects of depth and habitat on abundance of predatory reef fish. Predatory reef fish types/taxa were significantly predicted by depth and habitat types. Habitats in relatively deeper waters and dominated by hard and soft corals hosted high species richness and abundance of predatory reef fish types/taxa compared to mixed sandy and rubble habitats. The findings add to the growing evidence that deep waters around coral reefs are important habitats for predatory reef fish. Thus, careful management, through effective area and species protection measures, is needed to prevent further depletion of predatory reef-associated fish populations and to conserve this biologically important area., (Copyright © 2022 Elsevier Ltd. All rights reserved.)
- Published
- 2022
- Full Text
- View/download PDF
21. Integrate biodiversity targets from local to global levels.
- Author
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Obura DO, Katerere Y, Mayet M, Kaelo D, Msweli S, Mather K, Harris J, Louis M, Kramer R, Teferi T, Samoilys M, Lewis L, Bennie A, Kumah F, Isaacs M, and Nantongo P
- Published
- 2021
- Full Text
- View/download PDF
22. Reply to: Caution over the use of ecological big data for conservation.
- Author
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Queiroz N, Humphries NE, Couto A, Vedor M, da Costa I, Sequeira AMM, Mucientes G, Santos AM, Abascal FJ, Abercrombie DL, Abrantes K, Acuña-Marrero D, Afonso AS, Afonso P, Anders D, Araujo G, Arauz R, Bach P, Barnett A, Bernal D, Berumen ML, Lion SB, Bezerra NPA, Blaison AV, Block BA, Bond ME, Bonfil R, Braun CD, Brooks EJ, Brooks A, Brown J, Byrne ME, Campana SE, Carlisle AB, Chapman DD, Chapple TK, Chisholm J, Clarke CR, Clua EG, Cochran JEM, Crochelet EC, Dagorn L, Daly R, Cortés DD, Doyle TK, Drew M, Duffy CAJ, Erikson T, Espinoza E, Ferreira LC, Ferretti F, Filmalter JD, Fischer GC, Fitzpatrick R, Fontes J, Forget F, Fowler M, Francis MP, Gallagher AJ, Gennari E, Goldsworthy SD, Gollock MJ, Green JR, Gustafson JA, Guttridge TL, Guzman HM, Hammerschlag N, Harman L, Hazin FHV, Heard M, Hearn AR, Holdsworth JC, Holmes BJ, Howey LA, Hoyos M, Hueter RE, Hussey NE, Huveneers C, Irion DT, Jacoby DMP, Jewell OJD, Johnson R, Jordan LKB, Joyce W, Keating Daly CA, Ketchum JT, Klimley AP, Kock AA, Koen P, Ladino F, Lana FO, Lea JSE, Llewellyn F, Lyon WS, MacDonnell A, Macena BCL, Marshall H, McAllister JD, Meÿer MA, Morris JJ, Nelson ER, Papastamatiou YP, Peñaherrera-Palma C, Pierce SJ, Poisson F, Quintero LM, Richardson AJ, Rogers PJ, Rohner CA, Rowat DRL, Samoilys M, Semmens JM, Sheaves M, Shillinger G, Shivji M, Singh S, Skomal GB, Smale MJ, Snyders LB, Soler G, Soria M, Stehfest KM, Thorrold SR, Tolotti MT, Towner A, Travassos P, Tyminski JP, Vandeperre F, Vaudo JJ, Watanabe YY, Weber SB, Wetherbee BM, White TD, Williams S, Zárate PM, Harcourt R, Hays GC, Meekan MG, Thums M, Irigoien X, Eguiluz VM, Duarte CM, Sousa LL, Simpson SJ, Southall EJ, and Sims DW
- Subjects
- Conservation of Natural Resources, Big Data, Ecology
- Published
- 2021
- Full Text
- View/download PDF
23. Reply to: Shark mortality cannot be assessed by fishery overlap alone.
- Author
-
Queiroz N, Humphries NE, Couto A, Vedor M, da Costa I, Sequeira AMM, Mucientes G, Santos AM, Abascal FJ, Abercrombie DL, Abrantes K, Acuña-Marrero D, Afonso AS, Afonso P, Anders D, Araujo G, Arauz R, Bach P, Barnett A, Bernal D, Berumen ML, Lion SB, Bezerra NPA, Blaison AV, Block BA, Bond ME, Bonfil R, Bradford RW, Braun CD, Brooks EJ, Brooks A, Brown J, Bruce BD, Byrne ME, Campana SE, Carlisle AB, Chapman DD, Chapple TK, Chisholm J, Clarke CR, Clua EG, Cochran JEM, Crochelet EC, Dagorn L, Daly R, Cortés DD, Doyle TK, Drew M, Duffy CAJ, Erikson T, Espinoza E, Ferreira LC, Ferretti F, Filmalter JD, Fischer GC, Fitzpatrick R, Fontes J, Forget F, Fowler M, Francis MP, Gallagher AJ, Gennari E, Goldsworthy SD, Gollock MJ, Green JR, Gustafson JA, Guttridge TL, Guzman HM, Hammerschlag N, Harman L, Hazin FHV, Heard M, Hearn AR, Holdsworth JC, Holmes BJ, Howey LA, Hoyos M, Hueter RE, Hussey NE, Huveneers C, Irion DT, Jacoby DMP, Jewell OJD, Johnson R, Jordan LKB, Joyce W, Keating Daly CA, Ketchum JT, Klimley AP, Kock AA, Koen P, Ladino F, Lana FO, Lea JSE, Llewellyn F, Lyon WS, MacDonnell A, Macena BCL, Marshall H, McAllister JD, Meÿer MA, Morris JJ, Nelson ER, Papastamatiou YP, Peñaherrera-Palma C, Pierce SJ, Poisson F, Quintero LM, Richardson AJ, Rogers PJ, Rohner CA, Rowat DRL, Samoilys M, Semmens JM, Sheaves M, Shillinger G, Shivji M, Singh S, Skomal GB, Smale MJ, Snyders LB, Soler G, Soria M, Stehfest KM, Thorrold SR, Tolotti MT, Towner A, Travassos P, Tyminski JP, Vandeperre F, Vaudo JJ, Watanabe YY, Weber SB, Wetherbee BM, White TD, Williams S, Zárate PM, Harcourt R, Hays GC, Meekan MG, Thums M, Irigoien X, Eguiluz VM, Duarte CM, Sousa LL, Simpson SJ, Southall EJ, and Sims DW
- Subjects
- Animals, Conservation of Natural Resources, Seafood, Fisheries, Sharks
- Published
- 2021
- Full Text
- View/download PDF
24. Author Correction: Global status and conservation potential of reef sharks.
- Author
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MacNeil MA, Chapman DD, Heupel M, Simpfendorfer CA, Heithaus M, Meekan M, Harvey E, Goetze J, Kiszka J, Bond ME, Currey-Randall LM, Speed CW, Sherman CS, Rees MJ, Udyawer V, Flowers KI, Clementi G, Valentin-Albanese J, Gorham T, Adam MS, Ali K, Pina-Amargós F, Angulo-Valdés JA, Asher J, Barcia LG, Beaufort O, Benjamin C, Bernard ATF, Berumen ML, Bierwagen S, Bonnema E, Bown RMK, Bradley D, Brooks E, Brown JJ, Buddo D, Burke P, Cáceres C, Cardeñosa D, Carrier JC, Caselle JE, Charloo V, Claverie T, Clua E, Cochran JEM, Cook N, Cramp J, D'Alberto B, de Graaf M, Dornhege M, Estep A, Fanovich L, Farabaugh NF, Fernando D, Flam AL, Floros C, Fourqurean V, Garla R, Gastrich K, George L, Graham R, Guttridge T, Hardenstine RS, Heck S, Henderson AC, Hertler H, Hueter R, Johnson M, Jupiter S, Kasana D, Kessel ST, Kiilu B, Kirata T, Kuguru B, Kyne F, Langlois T, Lédée EJI, Lindfield S, Luna-Acosta A, Maggs J, Manjaji-Matsumoto BM, Marshall A, Matich P, McCombs E, McLean D, Meggs L, Moore S, Mukherji S, Murray R, Kaimuddin M, Newman SJ, Nogués J, Obota C, O'Shea O, Osuka K, Papastamatiou YP, Perera N, Peterson B, Ponzo A, Prasetyo A, Quamar LMS, Quinlan J, Ruiz-Abierno A, Sala E, Samoilys M, Schärer-Umpierre M, Schlaff A, Simpson N, Smith ANH, Sparks L, Tanna A, Torres R, Travers MJ, van Zinnicq Bergmann M, Vigliola L, Ward J, Watts AM, Wen C, Whitman E, Wirsing AJ, Wothke A, Zarza-Gonzâlez E, and Cinner JE
- Abstract
An Amendment to this paper has been published and can be accessed via a link at the top of the paper.
- Published
- 2020
- Full Text
- View/download PDF
25. Global status and conservation potential of reef sharks.
- Author
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MacNeil MA, Chapman DD, Heupel M, Simpfendorfer CA, Heithaus M, Meekan M, Harvey E, Goetze J, Kiszka J, Bond ME, Currey-Randall LM, Speed CW, Sherman CS, Rees MJ, Udyawer V, Flowers KI, Clementi G, Valentin-Albanese J, Gorham T, Adam MS, Ali K, Pina-Amargós F, Angulo-Valdés JA, Asher J, Barcia LG, Beaufort O, Benjamin C, Bernard ATF, Berumen ML, Bierwagen S, Bonnema E, Bown RMK, Bradley D, Brooks E, Brown JJ, Buddo D, Burke P, Cáceres C, Cardeñosa D, Carrier JC, Caselle JE, Charloo V, Claverie T, Clua E, Cochran JEM, Cook N, Cramp J, D'Alberto B, de Graaf M, Dornhege M, Estep A, Fanovich L, Farabaugh NF, Fernando D, Flam AL, Floros C, Fourqurean V, Garla R, Gastrich K, George L, Graham R, Guttridge T, Hardenstine RS, Heck S, Henderson AC, Hertler H, Hueter R, Johnson M, Jupiter S, Kasana D, Kessel ST, Kiilu B, Kirata T, Kuguru B, Kyne F, Langlois T, Lédée EJI, Lindfield S, Luna-Acosta A, Maggs J, Manjaji-Matsumoto BM, Marshall A, Matich P, McCombs E, McLean D, Meggs L, Moore S, Mukherji S, Murray R, Kaimuddin M, Newman SJ, Nogués J, Obota C, O'Shea O, Osuka K, Papastamatiou YP, Perera N, Peterson B, Ponzo A, Prasetyo A, Quamar LMS, Quinlan J, Ruiz-Abierno A, Sala E, Samoilys M, Schärer-Umpierre M, Schlaff A, Simpson N, Smith ANH, Sparks L, Tanna A, Torres R, Travers MJ, van Zinnicq Bergmann M, Vigliola L, Ward J, Watts AM, Wen C, Whitman E, Wirsing AJ, Wothke A, Zarza-Gonzâlez E, and Cinner JE
- Subjects
- Animals, Geographic Mapping, Population Density, Socioeconomic Factors, Conservation of Natural Resources statistics & numerical data, Coral Reefs, Ecosystem, Fisheries economics, Fisheries statistics & numerical data, Sharks physiology
- Abstract
Decades of overexploitation have devastated shark populations, leaving considerable doubt as to their ecological status
1,2 . Yet much of what is known about sharks has been inferred from catch records in industrial fisheries, whereas far less information is available about sharks that live in coastal habitats3 . Here we address this knowledge gap using data from more than 15,000 standardized baited remote underwater video stations that were deployed on 371 reefs in 58 nations to estimate the conservation status of reef sharks globally. Our results reveal the profound impact that fishing has had on reef shark populations: we observed no sharks on almost 20% of the surveyed reefs. Reef sharks were almost completely absent from reefs in several nations, and shark depletion was strongly related to socio-economic conditions such as the size and proximity of the nearest market, poor governance and the density of the human population. However, opportunities for the conservation of reef sharks remain: shark sanctuaries, closed areas, catch limits and an absence of gillnets and longlines were associated with a substantially higher relative abundance of reef sharks. These results reveal several policy pathways for the restoration and management of reef shark populations, from direct top-down management of fishing to indirect improvement of governance conditions. Reef shark populations will only have a high chance of recovery by engaging key socio-economic aspects of tropical fisheries.- Published
- 2020
- Full Text
- View/download PDF
26. Healthy and diverse coral reefs in Djibouti - A resilient reef system or few anthropogenic threats?
- Author
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Cowburn B, Samoilys MA, Osuka K, Klaus R, Newman C, Gudka M, and Obura D
- Subjects
- Animals, Anthozoa classification, Coral Reefs, Djibouti, Fisheries, Herbivory classification, Human Activities, Humans, Anthozoa growth & development, Ecosystem
- Abstract
Djiboutian coral reefs are poorly studied, but are of critical importance to tourism and artisanal fishing in this small developing nation. In 2014 and 2016 we carried out the most comprehensive survey of Djiboutian reefs to date, and present data on their ecology, health and estimate their vulnerability to future coral bleaching and anthropogenic impacts. Reef type varied from complex reef formations exposed to wind and waves along the Gulf of Aden, to narrow fringing reefs adjacent to the deep sheltered waters of the Gulf of Tadjoura. Evidence suggests that in the past 35 years the reefs have not previously experienced severe coral bleaching or significant human impacts, with many reefs having healthy and diverse coral and fish populations. Mean coral cover was high (52%) and fish assemblages were dominated by fishery target species and herbivores. However, rising sea surface temperatures (SSTs) and rapid recent coastal development activities in Djibouti are likely future threats to these relatively untouched reefs., (Copyright © 2019 Elsevier Ltd. All rights reserved.)
- Published
- 2019
- Full Text
- View/download PDF
27. Global spatial risk assessment of sharks under the footprint of fisheries.
- Author
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Queiroz N, Humphries NE, Couto A, Vedor M, da Costa I, Sequeira AMM, Mucientes G, Santos AM, Abascal FJ, Abercrombie DL, Abrantes K, Acuña-Marrero D, Afonso AS, Afonso P, Anders D, Araujo G, Arauz R, Bach P, Barnett A, Bernal D, Berumen ML, Bessudo Lion S, Bezerra NPA, Blaison AV, Block BA, Bond ME, Bonfil R, Bradford RW, Braun CD, Brooks EJ, Brooks A, Brown J, Bruce BD, Byrne ME, Campana SE, Carlisle AB, Chapman DD, Chapple TK, Chisholm J, Clarke CR, Clua EG, Cochran JEM, Crochelet EC, Dagorn L, Daly R, Cortés DD, Doyle TK, Drew M, Duffy CAJ, Erikson T, Espinoza E, Ferreira LC, Ferretti F, Filmalter JD, Fischer GC, Fitzpatrick R, Fontes J, Forget F, Fowler M, Francis MP, Gallagher AJ, Gennari E, Goldsworthy SD, Gollock MJ, Green JR, Gustafson JA, Guttridge TL, Guzman HM, Hammerschlag N, Harman L, Hazin FHV, Heard M, Hearn AR, Holdsworth JC, Holmes BJ, Howey LA, Hoyos M, Hueter RE, Hussey NE, Huveneers C, Irion DT, Jacoby DMP, Jewell OJD, Johnson R, Jordan LKB, Jorgensen SJ, Joyce W, Keating Daly CA, Ketchum JT, Klimley AP, Kock AA, Koen P, Ladino F, Lana FO, Lea JSE, Llewellyn F, Lyon WS, MacDonnell A, Macena BCL, Marshall H, McAllister JD, McAuley R, Meÿer MA, Morris JJ, Nelson ER, Papastamatiou YP, Patterson TA, Peñaherrera-Palma C, Pepperell JG, Pierce SJ, Poisson F, Quintero LM, Richardson AJ, Rogers PJ, Rohner CA, Rowat DRL, Samoilys M, Semmens JM, Sheaves M, Shillinger G, Shivji M, Singh S, Skomal GB, Smale MJ, Snyders LB, Soler G, Soria M, Stehfest KM, Stevens JD, Thorrold SR, Tolotti MT, Towner A, Travassos P, Tyminski JP, Vandeperre F, Vaudo JJ, Watanabe YY, Weber SB, Wetherbee BM, White TD, Williams S, Zárate PM, Harcourt R, Hays GC, Meekan MG, Thums M, Irigoien X, Eguiluz VM, Duarte CM, Sousa LL, Simpson SJ, Southall EJ, and Sims DW
- Subjects
- Animals, Population Density, Risk Assessment, Sharks classification, Ships, Time Factors, Animal Migration, Fisheries statistics & numerical data, Geographic Mapping, Oceans and Seas, Sharks physiology, Spatio-Temporal Analysis
- Abstract
Effective ocean management and the conservation of highly migratory species depend on resolving the overlap between animal movements and distributions, and fishing effort. However, this information is lacking at a global scale. Here we show, using a big-data approach that combines satellite-tracked movements of pelagic sharks and global fishing fleets, that 24% of the mean monthly space used by sharks falls under the footprint of pelagic longline fisheries. Space-use hotspots of commercially valuable sharks and of internationally protected species had the highest overlap with longlines (up to 76% and 64%, respectively), and were also associated with significant increases in fishing effort. We conclude that pelagic sharks have limited spatial refuge from current levels of fishing effort in marine areas beyond national jurisdictions (the high seas). Our results demonstrate an urgent need for conservation and management measures at high-seas hotspots of shark space use, and highlight the potential of simultaneous satellite surveillance of megafauna and fishers as a tool for near-real-time, dynamic management.
- Published
- 2019
- Full Text
- View/download PDF
28. The current status of coral reefs and their vulnerability to climate change and multiple human stresses in the Comoros Archipelago, Western Indian Ocean.
- Author
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Cowburn B, Samoilys MA, and Obura D
- Subjects
- Animals, Anthozoa classification, Climate Change, Comoros, Conservation of Natural Resources, Coral Reefs, Ecosystem, Environmental Pollution, Fisheries, Humans, Indian Ocean, Anthozoa growth & development, Human Activities
- Abstract
Coral bleaching and various human stressors have degraded the coral reefs of the Comoros Archipelago in the past 40 years and rising atmospheric CO
2 levels are predicted to further impact marine habitats. The condition of reefs in the Comoros is poorly known; using SCUBA based methods we surveyed reef condition and resilience to bleaching at sites in Grande Comore and Mohéli in 2010 and 2016. The condition of reefs was highly variable, with a range in live coral cover between 6% and 60% and target fishery species biomass between 20 and 500 kg per ha. The vulnerability assessment of reefs to future coral bleaching and their exposure to fishing, soil erosion and river pollution in Mohéli Marine Park found that offshore sites around the islets south of the island were least likely to be impacted by these negative pressures. The high variability in both reef condition and vulnerability across reefs in the Park lends itself to spatially explicit conservation actions. However, it is noteworthy that climate impacts to date appear moderate and that local human pressures are not having a major impact on components of reef health and recovery, suggesting these reefs are relatively resilient to the current anthropogenic stresses that they are experiencing., (Copyright © 2018 Elsevier Ltd. All rights reserved.)- Published
- 2018
- Full Text
- View/download PDF
29. Patterns in reef fish assemblages: Insights from the Chagos Archipelago.
- Author
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Samoilys M, Roche R, Koldewey H, and Turner J
- Subjects
- Animals, Anthozoa, Biodiversity, Biomass, Climate Change, Conservation of Natural Resources, Feeding Behavior, Fisheries, Herbivory, Indian Ocean, Indian Ocean Islands, Population Density, Species Specificity, Coral Reefs, Fishes classification, Fishes physiology
- Abstract
Understanding the drivers of variability in the composition of fish assemblages across the Indo-Pacific region is crucial to support coral reef ecosystem resilience. Whilst numerous relationships and feedback mechanisms between the functional roles of coral reef fishes and reef benthic composition have been investigated, certain key groups, such as the herbivores, are widely suggested to maintain reefs in a coral-dominated state. Examining links between fishes and reef benthos is complicated by the interactions between natural processes, disturbance events and anthropogenic impacts, particularly fishing pressure. This study examined fish assemblages and associated benthic variables across five atolls within the Chagos Archipelago, where fishing pressure is largely absent, to better understand these relationships. We found high variability in fish assemblages among atolls and sites across the archipelago, especially for key groups such as a suite of grazer-detritivore surgeonfish, and the parrotfishes which varied in density over 40-fold between sites. Differences in fish assemblages were significantly associated with variable levels of both live and recently dead coral cover and rugosity. We suggest these results reflect differing coral recovery trajectories following coral bleaching events and a strong influence of 'bottom-up' control mechanisms on fish assemblages. Species level analyses revealed that Scarus niger, Acanthurus nigrofuscus and Chlorurus strongylocephalos were key species driving differences in fish assemblage structure. Clarifying the trophic roles of herbivorous and detritivorous reef fishes will require species-level studies, which also examine feeding behaviour, to fully understand their contribution in maintaining reef resilience to climate change and fishing impacts.
- Published
- 2018
- Full Text
- View/download PDF
30. Towards a network of locally managed marine areas (LMMAs) in the Western Indian Ocean.
- Author
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Rocliffe S, Peabody S, Samoilys M, and Hawkins JP
- Subjects
- Indian Ocean, Biodiversity, Conservation of Natural Resources, Ecosystem
- Abstract
In the Western Indian Ocean (WIO), local communities are increasingly assuming responsibility for inshore marine resources either on their own or through collaborative management arrangements with governments or non-state actors. In this paper, we trace the evolution and expansion of community management in the WIO and present the first ever inventory and assessment of the region's locally managed marine areas (LMMAs). We compare the key attributes of these areas to those under government stewardship and assess their relative contributions to progress towards the Convention on Biodiversity (CBD) target of 10% of marine and coastal ecological regions to be effectively conserved by 2020. We also explore the legal frameworks that underpin locally managed marine initiatives in Kenya, Madagascar, Mozambique and Tanzania to assess the potential for future expansion. A principal finding is that whilst LMMAs protect more than 11,000 square kilometres of marine resource in the WIO, they are hampered by underdeveloped local and national legal structures and enforcement mechanisms. In our recommendations to improve local management, we suggest establishing a network of LMMA practitioners in the WIO region to share experiences and best practice.
- Published
- 2014
- Full Text
- View/download PDF
31. Benthic status of near-shore fishing grounds in the central Philippines and associated seahorse densities.
- Author
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Marcus JE, Samoilys MA, Meeuwig JJ, Villongco ZA, and Vincent AC
- Subjects
- Animals, Anthozoa, Eukaryota, Philippines, Population Density, Porifera, Ecosystem, Fisheries, Smegmamorpha
- Abstract
Benthic status of 28 near-shore, artisanal, coral reef fishing grounds in the central Philippines was assessed (2000-2002) together with surveys of the seahorse, Hippocampus comes. Our measures of benthic quality and seahorse densities reveal some of the most degraded coral reefs in the world. Abiotic structure dominated the fishing grounds: 69% of the benthos comprised rubble (32%), sand/silt (28%) and dead coral (9%). Predominant biotic structure included live coral (12%) and Sargassum (11%). Rubble cover increased with increasing distance from municipal enforcement centers and coincided with substantial blast fishing in this region of the Philippines. Over 2 years, we measured a significant decrease in benthic 'heterogeneity' and a 16% increase in rubble cover. Poor benthic quality was concomitant with extremely low seahorse densities (524 fish per km(2)). Spatial management, such as marine reserves, may help to minimize habitat damage and to rebuild depleted populations of seahorses and other reef fauna.
- Published
- 2007
- Full Text
- View/download PDF
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