45 results on '"Santa-Catarina C"'
Search Results
2. Polyamines, amino acids, IAA and ABA contents during Ocotea catharinensis seed germination
- Author
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Dias, L.L.C., primary, Santa-Catarina, C., additional, Silveira, V., additional, Pieruzzi, F.P., additional, and Floh, E.I.S., additional
- Published
- 2009
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3. In vitro morphogenesis and cell suspension culture establishment in Piper solmsianum C. DC. (Piperaceae) | Morfogênese in vitro e estabelecimento de culturas de suspensão celular em Piper solmsianum C. DC. (Piperaceae)
- Author
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Balbuena, T. S., Santa-Catarina, C., Silveira, V., Massuo Kato, and Floh, E. I. S.
4. Encapsulation of Beauveria bassiana conidia as a new strategy for the biological control of Aedes aegypti larvae.
- Author
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Bitencourt ROB, de Sousa Queiroz RR, Ribeiro A, de Souza Ribeiro YR, Boechat MSB, Carolino AT, Santa-Catarina C, and Samuels RI
- Subjects
- Animals, Mosquito Control methods, Aedes microbiology, Larva microbiology, Beauveria pathogenicity, Beauveria physiology, Spores, Fungal, Pest Control, Biological methods
- Abstract
The virulence of encapsulated fungal conidia against Aedes aegypti larvae was investigated. Molecular studies confirmed that the fungal isolate used here was Beauveria bassiana. Different conidial concentrations were tested. A concentration of 1 × 10
8 conidia mL- 1 was the most effective, resulting in 7% larval survival after 7 days. Next, alginate capsules (0.65%) containing conidia were prepared with different densities of calcium chloride (0.01 M, 0.009 M, and 0.008 M CaCl₂) and tested against larvae. Furthermore, groups of capsules were prepared with bird diet to act as an attractant. All capsule densities tested reduced larval survival (ranging from 22 to 67%). However, capsules with 0.008 M CaCl₂ were the most effective. Furthermore, fungus-only capsules were more efficient when compared to those containing bird diet. Laboratory and semi-field bioassays were conducted using mixtures of capsules with different densities. In the laboratory, survival ranged from 26 to 53%, whereas in semi-field conditions, 35%, and 80% survival was observed for groups exposed to fungus-only capsules or capsules containing diet, respectively. Histopathological studies of larvae exposed to capsules showed the presence of the fungus in the digestive tract and visible damage to enterocytes. These findings offer new insights into the biological control of Ae. aegypti larvae., Competing Interests: Declarations. Competing interests: The authors declare no competing interests., (© 2024. The Author(s).)- Published
- 2024
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5. In vitro micropropagation and tiliroside production in Paratecoma peroba (Record) Kuhlm, an endemic and endangered Brazilian tree.
- Author
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Pinheiro LZ, Ramos CC, Oliveira DB, Nunes CDR, Bernardes NR, Glória LL, Lemos CO, Santa-Catarina C, and Pereira SMF
- Subjects
- Brazil, Seeds chemistry, Germination drug effects, Plant Leaves chemistry, Plant Extracts chemistry, Flavonoids analysis, Plant Shoots chemistry, Plant Shoots drug effects, Plant Shoots growth & development, Trees, Gibberellins pharmacology, Gibberellins chemistry, Chromatography, High Pressure Liquid, Tissue Culture Techniques methods, Endangered Species, Bignoniaceae chemistry
- Abstract
In vitro tissue culture can be an alternative method for endangered species propagation, biodiversity conservation and secondary metabolite studies. Paratecoma peroba (Record) Kuhlm. (Bignoniaceae) is an endemic and endangered Brazilian species. This work aimed to establish in vitro morphogenesis and callus induction and to perform a phytochemical analysis of P. peroba callus extract. Higher seed germination (43%) was obtained in Wood Plant Medium culture without activated charcoal (AC). Combination of 5 µM benzyladenine + 10 µM gibberellic acid, without AC, resulted in a higher number of shoots (2 shoots/explant). A callus culture was stabilised from zygotic embryos using 2,4-dichlorophenoxyacetic acid. A callus methanolic extract was used for phytochemical analysis. The isolated substance was identified as tiliroside (kaempferol 3- O-β-D -(6''- O-E-p -coumaroyl)-glucopyranoside) by NMR and quantified in callus and leaf extracts by HPLC. This study adds to the chemical knowledge of this species and it is the first report of a flavonol in Paratecoma .
- Published
- 2024
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6. Plant regeneration capacity in seeds of three species of Miconia (Melastomataceae) may be related to endogenous polyamine profiles.
- Author
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Ziemmer JK, Dos Reis de Oliveira T, Santa-Catarina C, do Nascimento Vieira L, Goldenberg R, and Pacheco de Freitas Fraga H
- Subjects
- Seeds physiology, Melastomataceae physiology, Melastomataceae metabolism, Melastomataceae chemistry, Polyamines metabolism, Regeneration physiology
- Abstract
In plant tissue culture, differences in endogenous levels of species-specific plant growth regulators (PGRs) may explain differences in regenerative capacity. In the case of polyamines (PAs), their dynamics and distribution may vary between species, genotypes, tissues, and developmental pathways, such as sexual reproduction and apomixis. In this study, for the first time, we aimed to assess the impact of varying endogenous PAs levels in seeds from distinct reproductive modes in Miconia spp. (Melastomataceae), on their in vitro regenerative capacity. We quantified the free PAs endogenous content in seeds of Miconia australis (obligate apomictic), Miconia hyemalis (facultative apomictic), and Miconia sellowiana (sexual) and evaluated their in vitro regenerative potential in WPM culture medium supplemented with a combination of 2,4-dichlorophenoxyacetic acid (2,4-D) and 6-benzylaminopurine (BAP). The morphogenic responses were characterized by light microscopy and scanning electron microscopy and discussed regarding the endogenous PAs profiles found. Seeds of M. sellowiana presented approximately eight times more putrescine than M. australis, which was associated with a higher percentage of regenerated calluses (76.67%) than M. australis (5.56%). On the other hand, spermine levels were significantly higher in M. australis. Spermine is indicated as an inhibitor of auxin-carrying gene expression, which may have contributed to its lower regenerative capacity under the tested conditions. These findings provide important insights into in vitro morphogenesis mechanisms in Miconia and highlight the significance of endogenous PA levels in plant regeneration. These discoveries can potentially optimize future regeneration protocols in Miconia, a plant group still underexplored in this area., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.)
- Published
- 2024
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7. DNA methylation impacts soybean early development by modulating hormones and metabolic pathways.
- Author
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Coelho FS, Miranda SS, Moraes JL, Hemerly AS, Ballesteros HGF, Santa-Catarina C, Dos Santos RC, de Almeida FA, Silveira V, Macedo A, Floh EIS, de Oliveira Alves Sena E, de Oliveira JG, Viccini LF, de Matos EM, and Grativol C
- Subjects
- Gene Expression Regulation, Plant drug effects, Seedlings genetics, Seedlings growth & development, Seedlings metabolism, Plant Roots genetics, Plant Roots metabolism, Plant Roots growth & development, Epigenesis, Genetic, Plant Proteins metabolism, Plant Proteins genetics, DNA Methylation genetics, Glycine max genetics, Glycine max metabolism, Glycine max growth & development, Plant Growth Regulators metabolism, Metabolic Networks and Pathways genetics, Metabolic Networks and Pathways drug effects
- Abstract
Genomic DNA methylation patterns play a crucial role in the developmental processes of plants and mammals. In this study, we aimed to investigate the significant effects of epigenetic mechanisms on the development of soybean seedlings and metabolic pathways. Our analyses show that 5-azaC-treatment affects radicle development from two Days After Imbibition (DAI), as well as both shoot and root development. We examined the expression levels of key genes related to DNA methylation and demethylation pathways, such as DRM2, which encodes RNA-directed DNA Methylation (RdDM) pathway, SAM synthase, responsible for methyl group donation, and ROS1, a DNA demethylase. In treated seedling roots, we observed an increase in DRM2 expression and a decrease in ROS1 expression. Additionally, 5-azaC treatment altered protein accumulation, indicating epigenetic control over stress response while inhibiting nitrogen assimilation, urea cycle, and glycolysis-related proteins. Furthermore, it influenced the levels of various phytohormones and metabolites crucial for seedling growth, such as ABA, IAA, ethylene, polyamines (PUT and Cad), and free amino acids, suggesting that epigenetic changes may shape soybean responses to pathogens, abiotic stress, and nutrient absorption. Our results assist in understanding how hypomethylation shapes soybean responses to pathogens, abiotic stress, and nutrient absorption crucial for seedling growth, suggesting that the plant's assimilation of carbon and nitrogen, along with hormone pathways, may be influenced by epigenetic changes., (© 2024 Scandinavian Plant Physiology Society.)
- Published
- 2024
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8. Plant age-dependent dynamics of annatto pigment (bixin) biosynthesis in Bixa orellana.
- Author
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Machado KLG, Faria DV, Duarte MBS, Silva LAS, de Oliveira TDR, Falcão TCA, Batista DS, Costa MGC, Santa-Catarina C, Silveira V, Romanel E, Otoni WC, and Nogueira FTS
- Subjects
- Proteomics, Plant Breeding, Carotenoids metabolism, Bixaceae genetics, Bixaceae metabolism, Abscisic Acid metabolism, Plant Extracts
- Abstract
Age affects the production of secondary metabolites, but how developmental cues regulate secondary metabolism remains poorly understood. The achiote tree (Bixa orellana L.) is a source of bixin, an apocarotenoid used in diverse industries worldwide. Understanding how age-dependent mechanisms control bixin biosynthesis is of great interest for plant biology and for economic reasons. Here we overexpressed miRNA156 (miR156) in B. orellana to comprehensively study the effects of the miR156-SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) module on age-dependent bixin biosynthesis in leaves. Overexpression of miR156 in annatto plants (miR156ox) reduced BoSPL transcript levels, impacted leaf ontogeny, lessened bixin production, and increased abscisic acid levels. Modulation of expression of BoCCD4-4 and BoCCD1, key genes in carotenoid biosynthesis, was associated with diverting the carbon flux from bixin to abscisic acid in miR156ox leaves. Proteomic analyses revealed an overall low accumulation of most secondary metabolite-related enzymes in miR156ox leaves, suggesting that miR156-targeted BoSPLs may be required to activate several secondary metabolic pathways. Our findings suggest that the conserved BomiR156-BoSPL module is deployed to regulate leaf dynamics of bixin biosynthesis, and may create novel opportunities to fine-tune bixin output in B. orellana breeding programs., (© The Author(s) 2023. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.)
- Published
- 2024
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9. Salacia spp.: recent insights on biotechnological interventions and future perspectives.
- Author
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Chavan J, Patil P, Patil A, Deshmukh A, Panari P, Mohite A, Lawand P, Yadav P, Bodhe M, Kadam A, Namdas D, Pawar B, Jadhav A, Shekhawat M, and Santa-Catarina C
- Subjects
- Humans, Biotechnology, Plants, Cell Culture Techniques, Endophytes, Salacia
- Abstract
The plants of the genus Salacia L. are the storehouse of several bioactive compounds, and are involved in treating human diseases and disorders. Hitherto, a number of reports have been published on in vitro biotechnology as well as microbial involvement in the improvement of Salacia spp. The present review provides comprehensive insights into biotechnological interventions such as tissue culture for plant propagation, in vitro cultures, and endophytic microbes for up-scaling the secondary metabolites and biological potential of Salacia spp. Other biotechnological interventions such as molecular markers and bio-nanomaterials for up-grading the prospective of Salacia spp. are also considered. The in vitro biotechnology of Salacia spp. is largely focused on plant regeneration, callus culture, cell suspension culture, somatic embryogenesis, and subsequent ex vitro establishment of the in vitro-raised plantlets. The compiled information on tissue cultural strategies, involvement of endophytes, molecular markers, and nanomaterials will assist the advanced research related to in vitro manipulation, domestication, and commercial cultivation of elite clones of Salacia spp. Moreover, the genetic diversity and other molecular-marker based assessments will aid in designing conservation policies as well as support upgrading and breeding initiatives for Salacia spp. KEY POINTS: • Salacia spp. plays a multifaceted role in human health and disease management. • Critical and updated assessment of tissue culture, endophytic microbes, metabolites, molecular markers, and bio-nanomaterials of Salacia spp. • Key shortcomings and future research directions for Salacia biotechnology., (© 2024. The Author(s).)
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- 2024
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10. Time-Dependent Proteomic Signatures Associated with Embryogenic Callus Induction in Carica papaya L.
- Author
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Xavier LR, Corrêa CCG, da Paschoa RP, Vieira KDS, Pacheco DDR, Gomes LDES, Duncan BC, da Conceição LDS, Pinto VB, Santa-Catarina C, and Silveira V
- Abstract
Sex segregation increases the cost of Carica papaya production through seed-based propagation. Therefore, in vitro techniques are an attractive option for clonal propagation, especially of hermaphroditic plants. Here, we performed a temporal analysis of the proteome of C. papaya calli aiming to identify the key players involved in embryogenic callus formation. Mature zygotic embryos used as explants were treated with 20 μM 2,4-dichlorophenoxyacetic acid to induce embryogenic callus. Total proteins were extracted from explants at 0 (zygotic embryo) and after 7, 14, and 21 days of induction. A total of 1407 proteins were identified using a bottom-up proteomic approach. The clustering analysis revealed four distinct patterns of protein accumulation throughout callus induction. Proteins related to seed maturation and storage are abundant in the explant before induction, decreasing as callus formation progresses. Carbohydrate and amino acid metabolisms, aerobic respiration, and protein catabolic processes were enriched throughout days of callus induction. Protein kinases associated with auxin responses, such as SKP1-like proteins 1B, accumulated in response to callus induction. Additionally, regulatory proteins, including histone deacetylase (HD2C) and argonaute 1 (AGO1), were more abundant at 7 days, suggesting their role in the acquisition of embryogenic competence. Predicted protein-protein networks revealed the regulatory role of proteins 14-3-3 accumulated during callus induction and the association of proteins involved in oxidative phosphorylation and hormone response. Our findings emphasize the modulation of the proteome during embryogenic callus initiation and identify regulatory proteins that might be involved in the activation of this process.
- Published
- 2023
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11. Omics analyses in citrus reveal a possible role of RNA translation pathways and Unfolded Protein Response regulators in the tolerance to combined drought, high irradiance, and heat stress.
- Author
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Balfagón D, Zandalinas SI, Dos Reis de Oliveira T, Santa-Catarina C, and Gómez-Cadenas A
- Abstract
Environmental changes derived from global warming and human activities increase the intensity and frequency of stressful conditions for plants. Multiple abiotic factors acting simultaneously enhance stress pressure and drastically reduce plant growth, yield, and survival. Stress combination causes a specific stress situation that induces a particular plant response different to the sum of responses to the individual stresses. Here, by comparing transcriptomic and proteomic profiles to different abiotic stress combinations in two citrus genotypes, Carrizo citrange ( Citrus sinensis × Poncirus trifoliata ) and Cleopatra mandarin ( Citrus reshni ), with contrasting tolerance to different abiotic stresses, we revealed key responses to the triple combination of heat stress, high irradiance and drought. The specific transcriptomic response to this stress combination in Carrizo was directed to regulate RNA metabolic pathways and translation processes, potentially conferring an advantage with respect to Cleopatra. In addition, we found endoplasmic reticulum stress response as common to all individual and combined stress conditions in both genotypes and identified the accumulation of specific groups of heat shock proteins (HSPs), such as small HSPs and HSP70s, and regulators of the unfolded protein response, BiP2 and PDIL2-2, as possible factors involved in citrus tolerance to triple stress combination. Taken together, our findings provide new insights into the acclimation process of citrus plants to multiple stress combination, necessary for increasing crop tolerance to the changing climatic conditions., Competing Interests: None declared., (© The Author(s) 2023. Published by Oxford University Press on behalf of Nanjing Agricultural University.)
- Published
- 2023
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12. Physiological, epigenetic, and proteomic responses in Pfaffia glomerata growth in vitro under salt stress and 5-azacytidine.
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Fortini EA, Batista DS, Felipe SHS, Silva TD, Correia LNF, Farias LM, Faria DV, Pinto VB, Santa-Catarina C, Silveira V, De-la-Peña C, Castillo-Castro E, and Otoni WC
- Subjects
- Azacitidine pharmacology, Sodium Chloride pharmacology, Salt Tolerance genetics, Epigenesis, Genetic, Plant Proteins metabolism, Stress, Physiological, Proteomics, Amaranthaceae
- Abstract
Plants adjust their complex molecular, biochemical, and metabolic processes to overcome salt stress. Here, we investigated the proteomic and epigenetic alterations involved in the morphophysiological responses of Pfaffia glomerata, a medicinal plant, to salt stress and the demethylating agent 5-azacytidine (5-azaC). Moreover, we investigated how these changes affected the biosynthesis of 20-hydroxyecdysone (20-E), a pharmacologically important specialized metabolite. Plants were cultivated in vitro for 40 days in Murashige and Skoog medium supplemented with NaCl (50 mM), 5-azaC (25 μM), and NaCl + 5-azaC. Compared with the control (medium only), the treatments reduced growth, photosynthetic rates, and photosynthetic pigment content, with increase in sucrose, total amino acids, and proline contents, but a reduction in starch and protein. Comparative proteomic analysis revealed 282 common differentially accumulated proteins involved in 87 metabolic pathways, most of them related to amino acid and carbohydrate metabolism, and specialized metabolism. 5-azaC and NaCl + 5-azaC lowered global DNA methylation levels and 20-E content, suggesting that 20-E biosynthesis may be regulated by epigenetic mechanisms. Moreover, downregulation of a key protein in jasmonate biosynthesis indicates the fundamental role of this hormone in the 20-E biosynthesis. Taken together, our results highlight possible regulatory proteins and epigenetic changes related to salt stress tolerance and 20-E biosynthesis in P. glomerata, paving the way for future studies of the mechanisms involved in this regulation., (© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.)
- Published
- 2023
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13. Reduction of heat stress pressure and activation of photosystem II repairing system are crucial for citrus tolerance to multiple abiotic stress combination.
- Author
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Balfagón D, Zandalinas SI, Dos Reis de Oliveira T, Santa-Catarina C, and Gómez-Cadenas A
- Subjects
- Photosystem II Protein Complex metabolism, Proteomics, Heat-Shock Response, Stress, Physiological, Droughts, Citrus genetics
- Abstract
Drought, heat and high irradiance are abiotic stresses that negatively affect plant development and reduce crop productivity. The confluence of these three factors is common in nature, causing extreme situations for plants that compromise their viability. Drought and heat stresses increase the saturation of the photosystem reaction centers, increasing sensitivity to high irradiance. In addition, these stress conditions affect photosystem II (PSII) integrity, alter redox balance of the electron transport chain and decrease the photosynthetic rate. Here, we studied the effect of the stress combinations on the photosynthetic apparatus of two citrus genotypes, Carrizo citrange (Citrus sinensis × Poncirus trifoliata) and Cleopatra mandarin (Citrus reshni). Results obtained showed that physiological responses, such as modulation of stomatal aperture and transpiration rate, aimed to reduce leaf temperature, are key to diminishing heat impact on photosynthetic apparatus and increasing tolerance to double and triple combinations of drought, high irradiance and high temperatures. By using transcriptomic and proteomic analyses, we have demonstrated that under these abiotic stress combinations, Carrizo plants were able to increase expression of genes and proteins related to the photosystem repairing machinery (which better maintained the integrity of PSII) and other components of the photosynthetic apparatus. Our findings reveal crucial physiological and genetic responses in citrus to increase tolerance to the combination of multiple abiotic stresses that could be the basis for breeding programs that ensure a sustainable citrus production., (© 2022 The Authors. Physiologia Plantarum published by John Wiley & Sons Ltd on behalf of Scandinavian Plant Physiology Society.)
- Published
- 2022
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14. Citrus rootstocks modify scion antioxidant system under drought and heat stress combination.
- Author
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Balfagón D, Terán F, de Oliveira TDR, Santa-Catarina C, and Gómez-Cadenas A
- Subjects
- Antioxidants metabolism, Droughts, Heat-Shock Response, Hydrogen Peroxide metabolism, Superoxide Dismutase-1 metabolism, Citrus metabolism
- Abstract
Key Message: The activation of the antioxidant system under stress combination is a transmissible trait from the rootstock to the scion. Therefore, rootstock selection is key to improve crop performance and a sustainable production under changing climate conditions. Climate change is altering weather conditions such as mean temperatures and precipitation patterns. Rising temperatures, especially in certain regions, accelerates soil water depletion and increases drought risk, which affects agriculture yield. Previously, our research demonstrated that the citrus rootstock Carrizo citrange (Citrus sinensis × Poncirus trifoliata) is more tolerant than Cleopatra mandarin (C. reshni) to drought and heat stress combination, in part, due to a higher activation of the antioxidant system that alleviated damage produced by oxidative stress. Here, by using reciprocal grafts of both genotypes, we studied the importance of the rootstock on scion performance and antioxidant response under this stress combination. Carrizo rootstock, under stress combination, positively influenced Cleopatra scion by reducing H
2 O2 accumulation, increasing superoxide dismutase (SOD) and ascorbate peroxidase (APX) enzymatic activities and inducing SOD1, APX2 and catalase (CAT) protein accumulations. On the contrary, Cleopatra rootstock induced decreases in APX2 expression, CAT activity and SOD1, APX2 and CAT contents on Carrizo scion. Taken together, our findings indicate that the activation of the antioxidant system under stress combination is a transmissible trait from the rootstock to the scion and highlight the importance of the rootstock selection to improve crop performance and maintain citrus yield under the current scenario of climate change., (© 2021. The Author(s).)- Published
- 2022
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15. Mitochondrial proteomics reveals new insights into embryogenic competence acquisition in Carica papaya L. callus.
- Author
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Vale EM, Santana DB, Reis RS, Sousa KR, de Souza Filho GA, Oliveira JG, Santa-Catarina C, and Silveira V
- Subjects
- Embryonic Development, Hydrogen Peroxide, Carica, Proteomics methods
- Abstract
Understanding the mechanisms that endow a somatic cell with the ability to differentiate into a somatic embryo, which could result in numerous biotechnological applications, is still a challenge. The objective of this work was to identify some of the molecular and physiological mechanisms responsible for the acquisition of embryogenic competence during somatic embryogenesis in Carica papaya L. We performed a broad characterization of embryogenic (EC) and nonembryogenic calli (NEC) of using global and mitochondrial proteomic approaches, histomorphology, histochemistry, respiratory activity, and endogenous hormonal and hydrogen peroxide (H
2 O2 ) contents. EC and NEC presented remarkable differences in anatomical and histochemical characteristics, with EC showing a higher reactivity for the presence of proteins and neutral polysaccharides. Our results demonstrate that mitochondrial metabolism affects the embryogenic competence of C. papaya callus. The EC presented higher participation of alternative oxidase (AOX) enzymes, higher total cell respiration and presented a stronger accumulation of mitochondrial stress response proteins. Differential accumulation of auxin-responsive Gretchen Hagen 3 (GH3) family proteins in EC was related to a decrease in the content of free 2,4-dichlorophenoxyacetic acid (2,4-D). EC also showed higher endogenous H2 O2 contents. H2 O2 is a promising molecule for further investigation in differentiation protocols for C. papaya somatic embryos. SIGNIFICANCE: To further advance the understanding of somatic embryogenesis, we performed a broad characterization of embryogenic and nonembryogenic callus, through global and mitochondrial proteomic approaches, histomorphology, histochemistry, respiratory activity, and endogenous hormonal and hydrogen peroxide contents. Based on these results, we propose a working model for the competence of papaya callus. This model suggests that GH3 proteins play an important role in the regulation of auxins. In addition, embryogenic callus showed a greater abundance of stress response proteins and folding proteins. Embryogenic callus respiration occurs predominantly via AOX, and the inhibition of its activity is capable of inhibiting callus differentiation. Although the embryogenic callus presented greater total respiration and a greater abundance of oxidative phosphorylation proteins, they had less COX participation and less coupling efficiency, indicating less ATP production., (Copyright © 2021 Elsevier B.V. All rights reserved.)- Published
- 2022
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16. Somatic Embryogenesis in Sugarcane (Saccharum spp.).
- Author
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Almeida FA, Santa-Catarina C, and Silveira V
- Subjects
- Edible Grain, Embryonic Development genetics, Seeds genetics, Saccharum genetics
- Abstract
Somatic embryogenesis is the process by which embryos are formed from a single or small group of somatic cells in response to specific stimuli. Somatic embryogenesis has been applied to achieve mass clonal propagation on an industrial scale and to increase the agronomic performance of species of economic interest, including sugarcane. The use of somatic embryogenesis in sugarcane stands out as a biotechnological tool with a high potential for application in the clonal propagation of disease-free elite varieties, as an essential part of genetic transformation protocols, and in the production of synthetic seeds. A better understanding of each phase of somatic embryogenesis can help to optimize the process to enhance yields and produce high-quality emblings. In this chapter, we describe a detailed protocol for somatic embryogenesis in sugarcane (Saccharum sp.) to be used in research projects for small-scale production. This protocol comprises all steps from explant preparation to the establishment of sugarcane emblings., (© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.)
- Published
- 2022
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17. Integrative proteomics and phosphoproteomics reveals phosphorylation networks involved in the maintenance and expression of embryogenic competence in sugarcane callus.
- Author
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Xavier LR, Almeida FA, Pinto VB, Passamani LZ, Santa-Catarina C, de Souza Filho GA, Mooney BP, Thelen JJ, and Silveira V
- Subjects
- Plant Proteins genetics, Plant Proteins metabolism, Plant Somatic Embryogenesis Techniques, Seeds, Phosphorylation, Proteomics, Saccharum genetics, Saccharum metabolism
- Abstract
Plant embryogenic cell culture allows mass propagation and genetic manipulation, but the mechanisms that determine the fate of these totipotent cells in somatic embryos have not yet been elucidated. Here, we performed label-free quantitative proteomics and phosphoproteomics analyses to determine signaling events related to sugarcane somatic embryo differentiation, especially those related to protein phosphorylation. Embryogenic calli were compared at multiplication (EC0, dedifferentiated cells) and after 14 days of maturation (EC14, onset of embryo differentiation). Metabolic pathway analysis showed enriched lysine degradation and starch/sucrose metabolism proteins during multiplication, whereas the differentiation of somatic embryos was found to involve the enrichment of energy metabolism, including the TCA cycle and oxidative phosphorylation. Multiplication-related phosphoproteins were associated with transcriptional regulation, including SNF1 kinase homolog 10 (KIN10), SEUSS (SEU), and LEUNIG_HOMOLOG (LUH). The regulation of multiple light harvesting complex photosystem II proteins and phytochrome interacting factor 3-LIKE 5 were predicted to promote bioenergetic metabolism and carbon fixation during the maturation stage. A motif analysis revealed 15 phosphorylation motifs. The [D-pS/T-x-D] motif was overrepresented during somatic embryo differentiation. A protein-protein network analysis predicted interactions among SNF1-related protein kinase 2 (SnRK2), abscisic acid-responsive element-binding factor 2 (ABF2), and KIN10, which indicated the role of these proteins in embryogenic competence. The predicted interactions between TOPLESS (TPL) and histone deacetylase 19 (HD19) may be involved in posttranslational protein regulation during somatic embryo differentiation. These results reveal the protein regulation dynamics of somatic embryogenesis and new players in somatic embryo differentiation, including their predicted phosphorylation motifs and phosphosites., (Copyright © 2021 Elsevier GmbH. All rights reserved.)
- Published
- 2022
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18. Stage-specific protein regulation during somatic embryo development of Carica papaya L. 'Golden'.
- Author
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Botini N, Almeida FA, Cruz KZCM, Reis RS, Vale EM, Garcia AB, Santa-Catarina C, and Silveira V
- Subjects
- Carica genetics, Gene Expression Regulation, Plant genetics, Seeds genetics, Seeds growth & development, Carica growth & development, Embryonic Development genetics, Plant Development genetics, Proteomics
- Abstract
Somatic embryogenesis is an important biotechnological technique for large-scale propagation of elite genotypes. Identifying stage-specific compounds associated with somatic embryo development can help elucidate the ontogenesis of Carica papaya L. somatic embryos and improve tissue culture protocols. To identify the stage-specific proteins that are present during the differentiation of C. papaya somatic embryos, proteomic analyses of embryos at the globular, heart, torpedo and cotyledonary developmental stages were performed. Mass spectrometry data have been deposited in the ProteomeXchange with the dataset identifier PXD021107. Comparative proteomic analyses revealed a total of 801 proteins, with 392 classified as differentially accumulated proteins in at least one of the developmental stages. The globular-staged presented a higher number of unique proteins (16), and 7 were isoforms of 60S ribosomal proteins, suggesting high translational activity at the beginning of somatic embryogenesis. Proteins related to mitochondrial metabolism accumulated to a high degree at the early developmental stages and then decreased with increasing development, and they contributed to cell homeostasis in early somatic embryos. A progressive increase in the accumulation of vicilin, late embryogenesis abundant proteins and chloroplastic proteins that lead to somatic embryo maturation was also observed. The differential accumulation of acetylornithine deacetylase and S-adenosylmethionine synthase 2 proteins was correlated with increases in putrescine and spermidine contents, which suggests that both polyamines should be tested to determine whether they increase the conversion rates of globular- to cotyledonary-staged somatic embryos. Taken together, the results showed that somatic embryo development in C. papaya is regulated by the differential accumulation of proteins, with ribosomal and mitochondrial proteins more abundant during the early somatic embryo stages and seed maturation proteins more abundant during the late stages., (Copyright © 2020 Elsevier B.V. All rights reserved.)
- Published
- 2021
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19. Light spectra affect the in vitro shoot development of Cedrela fissilis Vell. (Meliaceae) by changing the protein profile and polyamine contents.
- Author
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Oliveira TDR, Aragão VPM, Moharana KC, Fedosejevs E, do Amaral FP, Sousa KR, Thelen JJ, Venâncio TM, Silveira V, and Santa-Catarina C
- Subjects
- Cedrela growth & development, Germination, Mass Spectrometry, Plant Development radiation effects, Plant Shoots growth & development, Proteomics methods, Cedrela physiology, Cedrela radiation effects, Light, Plant Shoots physiology, Plant Shoots radiation effects, Polyamines metabolism, Proteome radiation effects
- Abstract
The light spectrum quality is an important signal for plant growth and development. We evaluated the effects of different light spectra on the in vitro shoot development of Cedrela fissilis and its proteomic and polyamine (PA) profiles. Cotyledonary and apical nodal segments were grown under different light emitting diodes (LED) and fluorescent lamps. Shoots from cotyledonary nodal segments cultured with 6-benzyladenine (BA) that were grown under W
m Bd R LED showed increased length and higher fresh and dry matter compared to shoots grown under fluorescent lamps. A nonredundant protein databank generated by transcriptome sequencing and the de novo assembly of C. fissilis improved, and almost doubled, the protein identification compared to a Citrus sinensis databank. A total of 616 proteins were identified, with 23 up- and 103 down-accumulated in the shoots under Wm Bd R LEDs compared to fluorescent lamps. Most differentially accumulated proteins in shoots grown under the WmBdR LED lamp treatment compared to the fluorescent lamp treatment are involved in responding to metabolic processes, stress, biosynthetic and cellular protein modifications, and light stimulus processes. Among the proteins, the up-accumulation of argininosuccinate synthase was associated with an increase in the free putrescine content and, consequently, with higher shoot elongation under Wm Bd R LED. The down-accumulation of calreticulin, heat shock proteins, plastid-lipid-associated protein, ubiquitin-conjugating enzymes, and ultraviolet-B receptor UVR8 isoform X1 could be related to the longer shoot length noted under LED treatment. This study provides important data related to the effects of the light spectrum quality on in vitro morphogenesis through the modulation of specific proteins and free putrescine biosynthesis in C. fissilis, an endangered wood species from the Brazilian Atlantic Forest of economic and ecological relevance. The nonredundant protein databank of C. fissilis is available via ProteomeXchange under identifier PXD018020., Competing Interests: Declaration of Competing Interest None. Conflict of interest The authors declare that they have no conflicts of interest to report. Author contribution statement. CSC, VS and TRO: conceptualization, methodology, writing-reviewing and editing. TRO and VPMA: methodology, in vitro culture; PA analysis; data analysis. TRO, KRS, JJT, and VS: proteomic analyses. CSC and FPA: RNA sample preparation for RNA-seq analysis. EF, KCM and TMV: RNA-seq data analysis. All the authors read and approved the final manuscript. Credit Author Statement. CSC, VS and TRO: conceptualization, methodology, writing-reviewing and editing. TRO and VPMA: methodology, in vitro culture; PA analysis; data analysis. TRO, KRS, JJT, and VS: proteomic analyses. CSC and FPA: RNA sample preparation for RNA-seq analysis. EF, KCM and TMV: RNA-seq data analysis. All the authors read and approved the final manuscript. Declaration of interests The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier B.V. All rights reserved.)- Published
- 2020
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20. Label-Free Quantitative Phosphoproteomics Reveals Signaling Dynamics Involved in Embryogenic Competence Acquisition in Sugarcane.
- Author
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Almeida FA, Passamani LZ, Santa-Catarina C, Mooney BP, Thelen JJ, and Silveira V
- Subjects
- Abscisic Acid, Edible Grain, Embryonic Development, Plant Proteins genetics, Saccharum genetics
- Abstract
In this study, a label-free quantitative phosphoproteomic analysis was performed to identify and quantify signaling events related to the acquisition of embryogenic competence in sugarcane. Embryogenic and nonembryogenic calli were compared at the multiplication phase, resulting in the identification of 163 phosphoproteins unique to embryogenic calli, 9 unique to nonembryogenic calli, and 51 upregulated and 40 downregulated in embryogenic calli compared to nonembryogenic calli. Data are available via ProteomeXchange with identifier PXD018054. Motif-x analysis revealed the enrichment of [xxxpSPxxx], [RxxpSxxx], and [xxxpSDxxx] motifs, which are predicted phosphorylation sites for several kinases related to stress responses. The embryogenic-related phosphoproteins (those unique and upregulated in embryogenic calli) identified in the present study are related to abscisic acid-induced signaling and abiotic stress response; they include OSK3, ABF1, LEAs, and RD29Bs. On the other hand, the nonembryogenic-related phosphoproteins EDR1 and PP2Ac-2 are negative regulators of abscisic acid signaling, suggesting a relationship between phosphoproteins involved in the abscisic acid and stress responses in the acquisition of embryogenic competence. Moreover, embryogenic-related phosphoproteins associated with epigenetic modifications, such as HDA6, HDA19, and TOPLESS, and with RNA metabolism, including AGO1, DEAH5, SCL30, UB2C, and SR45, were identified to play potential roles in embryogenic competence. These results reveal novel phosphorylation sites for several proteins and identify potential candidate biomarkers for the acquisition of embryogenic competence in sugarcane.
- Published
- 2020
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21. LED lamps enhance somatic embryo maturation in association with the differential accumulation of proteins in the Carica papaya L. 'Golden' embryogenic callus.
- Author
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Almeida FA, Vale EM, Reis RS, Santa-Catarina C, and Silveira V
- Subjects
- Carica genetics, Indoleacetic Acids metabolism, Plant Proteins genetics, Plant Proteins metabolism, Plant Somatic Embryogenesis Techniques, Carica metabolism, Proteomics methods
- Abstract
The use of light-emitting diode (LED) lamps has been shown to be a promising approach for improving somatic embryo maturation during somatic embryogenesis. The aim of this work was to study the influence of the light source on somatic embryo differentiation and its relationship with the differential abundance of proteins in the Carica papaya L. 'Golden' embryogenic callus at 14 days of maturation. The white plus medium-blue (W
m B) LED and fluorescent lamp treatments produced an average of 82.4 and 47.6 cotyledonary somatic embryos per callus, respectively. A shotgun proteomics analysis revealed 28 upaccumulated and 7 downaccumulated proteins. The proteins upaccumulated in the embryogenic callus matured under the Wm B LED lamp compared with that matured under the fluorescent lamp included indole-3-acetic acid-amido synthetase (GH3) and actin-depolymerizing factor 2 (ADF2), which are involved in the regulation of auxin levels by auxin conjugation and transport. Additionally, proteins related to energy production (aconitate, ADH1, GAPCp, PKp and TPI), cell wall remodeling (PG and GLPs), and intracellular trafficking (NUP50A, IST1, small GTPases and H+ -PPase) showed significantly higher abundance in the embryogenic callus incubated under the Wm B LED lamp than in that incubated under the fluorescent lamp. The results showed that the Wm B LED lamp improved somatic embryo maturation in association with the differential accumulation of proteins in the C. papaya 'Golden' embryogenic callus., (Copyright © 2019 Elsevier Masson SAS. All rights reserved.)- Published
- 2019
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22. Embryogenic Competence Acquisition in Sugar Cane Callus Is Associated with Differential H + -Pump Abundance and Activity.
- Author
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Passamani LZ, Bertolazi AA, Ramos AC, Santa-Catarina C, Thelen JJ, and Silveira V
- Subjects
- Adenosine Triphosphatases metabolism, Gene Expression Regulation, Plant, Microsomes metabolism, Phosphatidylinositol Phosphates metabolism, Plant Proteins metabolism, Proteomics, Protons, Vacuoles metabolism, Plant Proteins analysis, Proton Pumps metabolism, Saccharum growth & development
- Abstract
Somatic embryogenesis is an important biological process in several plant species, including sugar cane. Proteomics approaches have shown that H
+ pumps are differentially regulated during somatic embryogenesis; however, the relationship between H+ flux and embryogenic competence is still unclear. This work aimed to elucidate the association between extracellular H+ flux and somatic embryo maturation in sugar cane. We performed a microsomal proteomics analysis and analyzed changes in extracellular H+ -flux and H+ -pump (P-H+ -ATPase, V-H+ -ATPase, and H+ -PPase) activity in embryogenic and non-embryogenic callus. A total of 657 proteins were identified, 16 of which were H+ pumps. We observed that P-H+ -ATPase and H+ -PPase were more abundant in embryogenic callus. Compared to non-embryogenic callus, embryogenic callus showed higher H+ influx, especially on maturation day 14, as well as higher H+ -pump activity (mainly, P-H+ -ATPase and H+ -PPase activity). H+ -PPase appears to be the major H+ pump in embryogenic callus during somatic embryo formation, functioning in both vacuole acidification and PPi homeostasis. These results provide evidence for an association between higher H+ -pump protein abundance and, consequently, higher H+ flux and embryogenic competence acquisition in the callus of sugar cane, allowing for the optimization of the somatic embryo conversion process by modulating the activities of these H+ pumps.- Published
- 2018
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23. Differentially abundant proteins associated with heterosis in the primary roots of popcorn.
- Author
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Rockenbach MF, Corrêa CCG, Heringer AS, Freitas ILJ, Santa-Catarina C, do Amaral-Júnior AT, and Silveira V
- Subjects
- Energy Metabolism genetics, Gene Expression Regulation, Plant genetics, Up-Regulation genetics, Chimera genetics, Chimera growth & development, Hybrid Vigor physiology, Plant Proteins biosynthesis, Plant Proteins genetics, Plant Roots genetics, Plant Roots growth & development, Proteome biosynthesis, Proteome genetics, Seedlings genetics, Seedlings growth & development, Zea mays genetics, Zea mays growth & development
- Abstract
Although heterosis has significantly contributed to increases in worldwide crop production, the molecular mechanisms regulating this phenomenon are still unknown. In the present study, we used a comparative proteomic approach to explore hybrid vigor via the proteome of both the popcorn L54 ♀ and P8 ♂ genotypes and the resultant UENF/UEM01 hybrid cross. To analyze the differentially abundant proteins involved in heterosis, we used the primary roots of these genotypes to analyze growth parameters and extract proteins. The results of the growth parameter analysis showed that the mid- and best-parent heterosis were positive for root length and root dry matter but negative for root fresh matter, seedling fresh matter, and protein content. The comparative proteomic analysis identified 1343 proteins in the primary roots of hybrid UENF/UEM01 and its parental lines; 220 proteins were differentially regulated in terms of protein abundance. The mass spectrometry proteomic data are available via ProteomeXchange with identifier "PXD009436". A total of 62 regulated proteins were classified as nonadditive, of which 53.2% were classified as high parent abundance (+), 17.8% as above-high parent abundance (+ +), 16.1% as below-low parent abundance (- -), and 12.9% as low parent abundance (-). A total of 22 biological processes were associated with nonadditive proteins; processes involving translation, ribosome biogenesis, and energy-related metabolism represented 45.2% of the nonadditive proteins. Our results suggest that heterosis in the popcorn hybrid UENF/UEM01 at an early stage of plant development is associated with an up-regulation of proteins related to synthesis and energy metabolism.
- Published
- 2018
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24. Dark Septate Endophytic Fungi Increase Green Manure- 15 N Recovery Efficiency, N Contents, and Micronutrients in Rice Grains.
- Author
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Vergara C, Araujo KEC, Urquiaga S, Santa-Catarina C, Schultz N, da Silva Araújo E, de Carvalho Balieiro F, Xavier GR, and Zilli JÉ
- Abstract
An understanding of the interaction between rice and dark septate endophytic (DSE) fungi, under green fertilization, may lead to sustainable agricultural practices. Nevertheless, this interaction is still poorly understood. Therefore, in this study, we aimed to evaluate the accumulation of macro- and micronutrients, dry matter, and protein and N recovery efficiency from Canavalia ensiformis (L.)-
15 N in rice inoculated with DSE fungi. An experiment under greenhouse conditions was conducted in a randomized complete block design comprising split-plots, with five replicates of rice plants potted in non-sterilized soil. Rice (Piauí variety) seedlings were inoculated with DSE fungi, A101 and A103, or left uninoculated (control) and transplanted into pots containing 12 kg of soil, which had previously been supplemented with dry, finely ground shoot biomass of C. ensiformis enriched with 2.15 atom %15 N. Two collections were performed in the experiment: one at 54 days after transplanting (DAT) and one at 130 DAT (at maturation). Growth indicators (at 54 DAT), grain yield, nutrient content, recovery efficiency, and the amount of N derived from C. ensiformis were quantified. At 54 DAT, the N content, chlorophyll content, and plant height of inoculated plants had increased significantly compared with the control, and these plants were more proficient in the use of N derived from C. ensiformis . At maturation, plants inoculated with A103 were distinguished by the recovery efficiency and amount of N derived from C. ensiformis and N content in the grain and shoot being equal to that in A101 inoculation and higher than that in the control, resulting in a higher accumulation of crude protein and dry matter in the full grain and panicle of DSE-rice interaction. In addition, Fe and Ni contents in the grains of rice inoculated with these fungi doubled with respect to the control, and in A103 inoculation, we observed Mn accumulation that was three times higher than in the other treatments. Our results suggest that the inoculation of rice with DSE fungi represents a strategy to improve green manure-N recovery, grain yield per plant, and grain quality in terms of micronutrients contents in cropping systems with a low N input.- Published
- 2018
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25. Insights from Proteomic Studies into Plant Somatic Embryogenesis.
- Author
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Heringer AS, Santa-Catarina C, and Silveira V
- Subjects
- Seeds chemistry, Plant Proteins analysis, Plant Somatic Embryogenesis Techniques, Plants embryology, Plants metabolism, Proteome analysis
- Abstract
Somatic embryogenesis is a biotechnological approach mainly used for the clonal propagation of different plants worldwide. In somatic embryogenesis, embryos arise from somatic cells under appropriate culture conditions. This plasticity in plants is a demonstration of true cellular totipotency and is the best approach among the genetic transformation protocols used for plant regeneration. Despite the importance of somatic embryogenesis, knowledge regarding the control of the somatic embryogenesis process is limited. Therefore, the elucidation of both the biochemical and molecular processes is important for understanding the mechanisms by which a single somatic cell becomes a whole plant. Modern proteomic techniques rely on an alternative method for the identification and quantification of proteins with different abundances in embryogenic cell cultures or somatic embryos and enable the identification of specific proteins related to somatic embryogenesis development. This review focuses on somatic embryogenesis studies that use gel-free shotgun proteomic analyses to categorize proteins that could enhance our understanding of particular aspects of the somatic embryogenesis process and identify possible targets for future studies., (© 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2018
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26. Morphological analyses and variation in carbohydrate content during the maturation of somatic embryos of Carica papaya .
- Author
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Vale EM, Reis RS, Passamani LZ, Santa-Catarina C, and Silveira V
- Abstract
Efficient protocols for somatic embryogenesis of papaya ( Carica papaya L.) have great potential for selecting elite hybrid genotypes. Addition of polyethylene glycol (PEG), a nonplasmolyzing osmotic agent, to a maturation medium increases the production of somatic embryos in C . papaya . To study the effects of PEG on somatic embryogenesis of C . papaya , we analyzed somatic embryo development and carbohydrate profile changes during maturation treatments with PEG (6%) or without PEG (control). PEG treatment (6%) increased the number of normal mature somatic embryos followed by somatic plantlet production. In both control and PEG treatments, pro-embryogenic differentiation to the cotyledonary stage was observed and was significantly higher with PEG treatment. Histomorphological analysis of embryonic cultures with PEG revealed meristematic centers containing small isodiametric cells with dense cytoplasm and evident nuclei. Concomitant with the increase in the differentiation of somatic embryos in PEG cultures, there was an increase in the endogenous content of sucrose and starch, which appears to be related to a rising demand for energy, a key point in the conversion of C . papaya somatic embryos. The endogenous carbohydrate profile may be a valuable parameter for developing optimized protocols for the maturation of somatic embryos in papaya., Competing Interests: Compliance with ethical standardsThe authors of the manuscript have no conflict of interest to declare.
- Published
- 2018
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27. Contribution of dark septate fungi to the nutrient uptake and growth of rice plants.
- Author
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Vergara C, Araujo KEC, Alves LS, Souza SR, Santos LA, Santa-Catarina C, Silva KD, Pereira GMD, Xavier GR, and Zilli JÉ
- Subjects
- Ascomycota classification, Ascomycota genetics, Ascomycota isolation & purification, Ascomycota physiology, Biomass, Fungi classification, Fungi genetics, Fungi isolation & purification, Nitrogen metabolism, Oryza metabolism, Phosphates metabolism, Phylogeny, Plant Roots growth & development, Plant Roots metabolism, Plant Roots microbiology, Potassium metabolism, Fungi physiology, Oryza growth & development, Oryza microbiology
- Abstract
The use of dark septate fungi (DSE) to promote plant growth can be beneficial to agriculture, and these organisms are important allies in the search for sustainable agriculture practices. This study investigates the contribution of dark septate fungi to the absorption of nutrients by rice plants and their ensuing growth. Four dark septate fungi isolates that were identified by Internal transcribed spacer phylogeny were inoculated in rice seeds (Cv. Piauí). The resulting root colonization was estimated and the kinetic parameters V
max and Km were calculated from the nitrate contents of the nutrient solution. The macronutrient levels in the shoots, and the NO3 - -N, NH4 + -N, free amino-N and soluble sugars in the roots, sheathes and leaves were measured. The rice roots were significantly colonized by all of the fungi, but in particular, isolate A103 increased the fresh and dry biomass of the shoots and the number of tillers per plant, amino-N, and soluble sugars as well as the N, P, K, Mg and S contents in comparison with the control treatment. When inoculated with isolates A103 and A101, the plants presented lower Km values, indicating affinity increases for NO3 - -N absorption. Therefore, the A103 Pleosporales fungus presented the highest potential for the promotion of rice plant growth, increasing the tillering and nutrients uptake, especially N (due to an enhanced affinity for N uptake) and P., (Published by Elsevier Editora Ltda.)- Published
- 2018
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28. Proteomics as a Tool to Study Molecular Changes During Plant Morphogenesis In Vitro.
- Author
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Wendt Dos Santos AL, Souza Reis R, Schuabb Heringer A, Segal Floh EI, Santa-Catarina C, and Silveira V
- Subjects
- Computational Biology, Electrophoresis, Gel, Two-Dimensional, Mass Spectrometry, Plant Proteins isolation & purification, Plant Development genetics, Proteomics methods
- Abstract
Proteome analysis represents a promising approach for plant tissue culture since it is now possible to identify and quantify proteins on a large scale. Biomarker discovery and the study of the molecular events associated with in vitro plant morphogenesis are considered potential targets for application of proteomics technologies. This chapter describes a protocol for application in in vitro plant material using two proteomics approaches: 2-DE coupled to mass spectrometry and liquid chromatography-linked tandem mass spectrometry.
- Published
- 2018
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29. Salt stress induces changes in the proteomic profile of micropropagated sugarcane shoots.
- Author
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Passamani LZ, Barbosa RR, Reis RS, Heringer AS, Rangel PL, Santa-Catarina C, Grativol C, Veiga CFM, Souza-Filho GA, and Silveira V
- Subjects
- Plant Proteins analysis, Plant Shoots growth & development, Proteome analysis, Proteome metabolism, Proteomics, Saccharum growth & development, Plant Proteins metabolism, Plant Shoots physiology, Saccharum physiology, Salt Tolerance, Stress, Physiological
- Abstract
Salt stress is one of the most common stresses in agricultural regions worldwide. In particular, sugarcane is affected by salt stress conditions, and no sugarcane cultivar presently show high productivity accompanied by a tolerance to salt stress. Proteomic analysis allows elucidation of the important pathways involved in responses to various abiotic stresses at the biochemical and molecular levels. Thus, this study aimed to analyse the proteomic effects of salt stress in micropropagated shoots of two sugarcane cultivars (CB38-22 and RB855536) using a label-free proteomic approach. The mass spectrometry proteomics data are available via ProteomeXchange with identifier PXD006075. The RB855536 cultivar is more tolerant to salt stress than CB38-22. A quantitative label-free shotgun proteomic analysis identified 1172 non-redundant proteins, and 1160 of these were observed in both cultivars in the presence or absence of NaCl. Compared with CB38-22, the RB855536 cultivar showed a greater abundance of proteins involved in non-enzymatic antioxidant mechanisms, ion transport, and photosynthesis. Some proteins, such as calcium-dependent protein kinase, photosystem I, phospholipase D, and glyceraldehyde-3-phosphate dehydrogenase, were more abundant in the RB855536 cultivar under salt stress. Our results provide new insights into the response of sugarcane to salt stress, and the changes in the abundance of these proteins might be important for the acquisition of ionic and osmotic homeostasis during exposure to salt stress.
- Published
- 2017
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30. Mps1 (Monopolar Spindle 1) Protein Inhibition Affects Cellular Growth and Pro-Embryogenic Masses Morphology in Embryogenic Cultures of Araucaria angustifolia (Araucariaceae).
- Author
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Douétts-Peres JC, Cruz MA, Reis RS, Heringer AS, de Oliveira EA, Elbl PM, Floh EI, Silveira V, and Santa-Catarina C
- Subjects
- Cell Culture Techniques, Plant Proteins genetics, Plant Proteins metabolism, Tracheophyta chemistry, Transcriptome, Cell Proliferation, Plant Proteins antagonists & inhibitors, Plant Somatic Embryogenesis Techniques, Tracheophyta embryology, Tracheophyta metabolism
- Abstract
Somatic embryogenesis has been shown to be an efficient tool for studying processes based on cell growth and development. The fine regulation of the cell cycle is essential for proper embryo formation during the process of somatic embryogenesis. The aims of the present work were to identify and perform a structural and functional characterization of Mps1 and to analyze the effects of the inhibition of this protein on cellular growth and pro-embryogenic mass (PEM) morphology in embryogenic cultures of A. angustifolia. A single-copy Mps1 gene named AaMps1 was retrieved from the A. angustifolia transcriptome database, and through a mass spectrometry approach, AaMps1 was identified and quantified in embryogenic cultures. The Mps1 inhibitor SP600125 (10 μM) inhibited cellular growth and changed PEMs, and these effects were accompanied by a reduction in AaMps1 protein levels in embryogenic cultures. Our work has identified the Mps1 protein in a gymnosperm species for the first time, and we have shown that inhibiting Mps1 affects cellular growth and PEM differentiation during A. angustifolia somatic embryogenesis. These data will be useful for better understanding cell cycle control during somatic embryogenesis in plants.
- Published
- 2016
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31. Putrescine induces somatic embryo development and proteomic changes in embryogenic callus of sugarcane.
- Author
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Reis RS, Vale Ede M, Heringer AS, Santa-Catarina C, and Silveira V
- Subjects
- Computational Biology, Culture Media chemistry, Glutathione Transferase chemistry, Mucoproteins chemistry, Plant Somatic Embryogenesis Techniques, Polyamines chemistry, Proteomics, Spectrometry, Mass, Electrospray Ionization, Spermidine chemistry, Spermine chemistry, Tandem Mass Spectrometry, Plant Proteins chemistry, Proteome chemistry, Putrescine chemistry, Saccharum chemistry
- Abstract
Somatic embryogenesis, an important biotechnological technique, has great potential for application in sugarcane breeding and micropropagation. Polyamines have been associated with the regulation of several physiological processes, including the acquisition of embryogenic competence and somatic embryogenesis. In this study, we used a proteomic approach to evaluate the effects of exogenous polyamine on sugarcane somatic embryo development to better understand this process. Embryogenic cultures were treated with different concentrations of putrescine, spermidine, and spermine. Proteomic analyses combined the shotgun method and the nanoESI-HDMS(E) technology. Among polyamines, 500 μM putrescine gave rise to the highest number of somatic embryos; however, no differences in the amount of fresh matter were observed between polyamines and control. Differences in protein abundance profiles resulting from the effect of 500 μM putrescine on sugarcane somatic embryo maturation were observed. Proteomic analyses of putrescine and control treatment showed differences in the abundances of proteins related to somatic embryogenesis, such as arabinogalactan proteins, peroxidases, heat shock proteins, glutathione s-transferases, late embryogenesis abundant proteins, and 14-3-3 proteins. These results show that putrescine and the identified proteins play important roles in protecting the cells against an in vitro stress environment, contributing to the formation of somatic embryos during the maturation treatment., Biological Significance: Despite all studies with somatic embryogenesis, the molecular mechanisms controlling the process have not been completely understood. In this study, we highlighted the effects of the polyamine putrescine on somatic embryogenesis of sugarcane and the differentially abundant proteins related to somatic embryo development. We identified six groups of important stress related proteins that are involved in the adaptation of cells to the stress environment of in vitro culture and may also be part of the mechanisms associated to the somatic embryogenesis process. Therefore, our research is trying to understand the complexity of how one single somatic cell becomes a whole plant., (Copyright © 2015 Elsevier B.V. All rights reserved.)
- Published
- 2016
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32. Label-Free Quantitative Proteomics of Embryogenic and Non-Embryogenic Callus during Sugarcane Somatic Embryogenesis.
- Author
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Heringer AS, Barroso T, Macedo AF, Santa-Catarina C, Souza GH, Floh EI, de Souza-Filho GA, and Silveira V
- Subjects
- Seeds growth & development, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Plant Proteins metabolism, Plant Somatic Embryogenesis Techniques methods, Proteome analysis, Proteomics methods, Saccharum embryology, Saccharum metabolism, Seeds metabolism
- Abstract
The development of somatic cells in to embryogenic cells occurs in several stages and ends in somatic embryo formation, though most of these biochemical and molecular changes have yet to be elucidated. Somatic embryogenesis coupled with genetic transformation could be a biotechnological tool to improve potential crop yields potential in sugarcane cultivars. The objective of this study was to observe somatic embryo development and to identify differentially expressed proteins in embryogenic (E) and non-embryogenic (NE) callus during maturation treatment. E and NE callus were cultured on maturation culture medium supplemented with different concentrations (0.0, 0.75, 1.5 and 2.0 g L(-1)) of activated charcoal (AC). Somatic embryo formation and differential protein expression were evaluated at days 0 and 21 using shotgun proteomic analyses. Treatment with 1.5 g L(-1) AC resulted in higher somatic embryo maturation rates (158 somatic embryos in 14 days) in E callus but has no effect in NE callus. A total of 752 co-expressed proteins were identified through the SUCEST (The Sugarcane EST Project), including many housekeeping proteins. E callus showed 65 exclusive proteins on day 0, including dehydrogenase, desiccation-related protein, callose synthase 1 and nitric oxide synthase. After 21 days on maturation treatment, 14 exclusive proteins were identified in E callus, including catalase and secreted protein. NE callus showed 23 exclusive proteins on day 0 and 10 exclusive proteins after 21 days on maturation treatment, including many proteins related to protein degradation. The induction of maturation leads to somatic embryo development, which likely depends on the expression of specific proteins throughout the process, as seen in E callus under maturation treatment. On the other hand, some exclusive proteins can also specifically prevent of somatic embryos development, as seen in the NE callus.
- Published
- 2015
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33. Comparative proteomic analysis of somatic embryo maturation in Carica papaya L.
- Author
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Vale Ede M, Heringer AS, Barroso T, Ferreira AT, da Costa MN, Perales JE, Santa-Catarina C, and Silveira V
- Abstract
Background: Somatic embryogenesis is a complex process regulated by numerous factors. The identification of proteins that are differentially expressed during plant development could result in the development of molecular markers of plant metabolism and provide information contributing to the monitoring and understanding of different biological responses. In addition, the identification of molecular markers could lead to the optimization of protocols allowing the use of biotechnology for papaya propagation and reproduction. This work aimed to investigate the effects of polyethylene glycol (PEG) on somatic embryo development and the protein expression profile during somatic embryo maturation in papaya (Carica papaya L.)., Results: The maturation treatment supplemented with 6% PEG (PEG6) resulted in the greatest number of somatic embryos and induced differential protein expression compared with cultures grown under the control treatment. Among 135 spots selected for MS/MS analysis, 76 spots were successfully identified, 38 of which were common to both treatments, while 14 spots were unique to the control treatment, and 24 spots were unique to the PEG6 treatment. The identified proteins were assigned to seven categories or were unclassified. The most representative class of proteins observed in the control treatment was associated with the stress response (25.8%), while those under PEG6 treatment were carbohydrate and energy metabolism (18.4%) and the stress response (18.4%)., Conclusions: The differential expression of three proteins (enolase, esterase and ADH3) induced by PEG6 treatment could play an important role in maturation, and these proteins could be characterized as candidate biomarkers of somatic embryogenesis in papaya.
- Published
- 2014
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34. Polyamines affect the cellular growth and structure of pro-embryogenic masses in Araucaria angustifolia embryogenic cultures through the modulation of proton pump activities and endogenous levels of polyamines.
- Author
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Dutra NT, Silveira V, de Azevedo IG, Gomes-Neto LR, Façanha AR, Steiner N, Guerra MP, Floh EI, and Santa-Catarina C
- Subjects
- Tracheophyta cytology, Plant Somatic Embryogenesis Techniques, Polyamines metabolism, Proton Pumps metabolism, Tracheophyta embryology, Tracheophyta metabolism
- Abstract
Polyamines (PAs) are abundant polycationic compounds involved in many physiological processes in plants, including somatic embryogenesis. This study investigates the role of PAs on cellular growth and structure of pro-embryogenic masses (PEMs), endogenous PA and proton pump activities in embryogenic suspension cultures of Araucaria angustifolia. The embryogenic suspension cultures were incubated with putrescine (Put), spermidine (Spd), spermine (Spm) and the inhibitor methylglyoxal-bis(guanylhydrazone) (MGBG), respectively (1 mM). After 24 h and 21 days, the cellular growth and structure of PEMs, endogenous PA contents and proton pump activities were analyzed. The addition of Spm reduced the cellular growth and promoted the development of PEMs in embryogenic cultures, which could be associated with a reduction in the activities of proton pumps, such as H(+) -ATPase P- and V-types and H(+) -PPases, and alterations in the endogenous PA contents. Spm significantly affected the physiology of the A. angustifolia somatic embryogenesis suspension, as it potentially affects cellular growth and structure of PEMs through the modulation of proton pump activities. This work demonstrates the involvement of exogenous PAs in the modulation of cellular growth and structure of PEMs, endogenous PA levels and proton pump activities during somatic embryogenesis. To our knowledge, this study is the first to report a relationship between PAs and proton pump activities in these processes. The results obtained in this study offer new perspectives for studies addressing the role of PAs and proton pump on somatic embryogenesis in this species., (Copyright © Physiologia Plantarum 2012.)
- Published
- 2013
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35. Glutathione improves early somatic embryogenesis in Araucaria angustifolia (Bert) O. Kuntze by alteration in nitric oxide emission.
- Author
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Vieira Ldo N, Santa-Catarina C, de Freitas Fraga HP, Dos Santos AL, Steinmacher DA, Schlogl PS, Silveira V, Steiner N, Floh EI, and Guerra MP
- Subjects
- Brazil, Cell Division, Endangered Species, Oxidation-Reduction, Seeds metabolism, Tracheophyta metabolism, Glutathione metabolism, Glutathione Disulfide metabolism, Nitric Oxide metabolism, Plant Development, Plant Somatic Embryogenesis Techniques methods, Seeds growth & development, Tracheophyta embryology
- Abstract
In this work, it was observed a straight relationship between the manipulation of the reduced glutathione (GSH)/glutathione disulfide (GSSG) ratio, nitric oxide emission and quality and number of early somatic embryos in Araucaria angustifolia, a Brazilian endangered native conifer. In low concentrations GSH (0.01 and 0.1mM) is a potential NO scavenger in the culture medium. Furthermore, it can increase the number of early SE formed in cell suspension culture media in a few days. However, the maintenance in this low redox state lead to a loss of early somatic embryos polarization. In gelled culture medium, high levels of GSH (5mM) allows the development of globular embryos presenting a high NO emission on embryo apex, stressing its importance in the differentiation and cell division. Taken together these results indicate that the modification of the embryogenic cultures redox state might be an effective strategy to develop more efficient embryogenic systems in A. angustifolia., (Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.)
- Published
- 2012
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36. Capsicum annuum L. trypsin inhibitor as a template scaffold for new drug development against pathogenic yeast.
- Author
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Ribeiro SF, Silva MS, Da Cunha M, Carvalho AO, Dias GB, Rabelo G, Mello EO, Santa-Catarina C, Rodrigues R, and Gomes VM
- Subjects
- Antifungal Agents pharmacology, Candida albicans growth & development, Candida albicans ultrastructure, Candida tropicalis growth & development, Candida tropicalis ultrastructure, Cell Membrane Permeability drug effects, Culture Media, Conditioned, Dose-Response Relationship, Drug, Drug Design, Drug Evaluation, Preclinical, Fungal Proteins antagonists & inhibitors, Glucose pharmacology, Kluyveromyces growth & development, Kluyveromyces ultrastructure, Microbial Sensitivity Tests, Microscopy, Electron, Scanning, Nitric Oxide biosynthesis, Plant Proteins chemistry, Plant Proteins isolation & purification, Proton-Translocating ATPases antagonists & inhibitors, Saccharomyces cerevisiae growth & development, Saccharomyces cerevisiae ultrastructure, Trypsin Inhibitors chemistry, Trypsin Inhibitors isolation & purification, Antifungal Agents isolation & purification, Candida albicans drug effects, Candida tropicalis drug effects, Capsicum enzymology, Kluyveromyces drug effects, Plant Proteins pharmacology, Saccharomyces cerevisiae drug effects, Trypsin Inhibitors pharmacology
- Abstract
A 6,000 Da peptide, named CaTI, was isolated from Capsicum annuum L. seeds and showed potent inhibitory activity against trypsin and chymotrypsin. The aim of this study was to determine the effect of CaTI on Saccharomyces cerevisiae, Candida albicans, Candida tropicalis and Kluyveromyces marxiannus cells. We observed that CaTI inhibited the growth of S. cerevisiae, K. marxiannus as well as C. albicans and induced cellular agglomeration and the release of cytoplasmic content. No effect on growth was observed in C. tropicalis but morphological changes were noted. In the spot assay, different degrees of sensitivity were shown among the strains and concentrations tested. Scanning electron microscopy showed that S. cerevisiae, K. marxiannus and C. albicans, in the presence of CaTI, exhibited morphological alterations, such as the formation of pseudohyphae, cellular aggregates and elongated forms. We also show that CaTI induces the generation of nitric oxide and interferes in a dose-dependent manner with glucose-stimulated acidification of the medium mediated by H(+)-ATPase of S. cerevisiae cells.
- Published
- 2012
- Full Text
- View/download PDF
37. Antifungal and other biological activities of two 2S albumin-homologous proteins against pathogenic fungi.
- Author
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Ribeiro SF, Taveira GB, Carvalho AO, Dias GB, Da Cunha M, Santa-Catarina C, Rodrigues R, and Gomes VM
- Subjects
- Albumins chemistry, Antifungal Agents chemistry, Fungi growth & development, Plant Proteins chemistry, Seeds chemistry, Albumins pharmacology, Antifungal Agents pharmacology, Capsicum chemistry, Fungi drug effects, Passiflora chemistry, Plant Proteins pharmacology
- Abstract
The aim of this study was to determine whether 2S albumins from Passiflora edulis f. flavicarpa and Capsicum annuum seeds inhibit growth, induce plasma membrane permeabilization and induce endogenous production of nitric oxide in different pathogenic and non-pathogenic yeasts. The 2S albumin from P. flavicarpa (Pf-Alb) inhibited the growth of Kluyveromyces marxiannus, Candida albicans and Candida parapsilosis. The membranes of these yeast strains were permeabilized in the presence of Pf-Alb. The Pf-Alb also inhibited the glucose-stimulated acidification of the medium by Saccharomyces cerevisiae and C. albicans cells, which indicates a probable impairment of fungal metabolism because the inhibition of acidification occurred at various Pf-Alb concentrations and pre-incubation times. The 2S albumin from C. annuum (Ca-Alb) inhibited the growth of the yeasts K. marxiannus, C. tropicalis, C. albicans and S. cerevisiae. These yeast strains exhibited NO induction in the presence of Ca-Alb and displayed cellular agglomeration, elongated cells and the induction of pseudohyphae. Pf-Alb and Ca-Alb at various concentrations also inhibited the glucose-stimulated acidification of the medium by S. cerevisiae cells. Our results indicate that the ability of antimicrobial plant proteins such as 2S albumins to induce microbial inhibition could be an important factor in determining pathogen virulence. Therefore, 2S albumins might be targets for the design of new antifungal drugs.
- Published
- 2012
- Full Text
- View/download PDF
38. Structural and functional characterization of the protein kinase Mps1 in Arabidopsis thaliana.
- Author
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de Oliveira EA, Romeiro NC, Ribeiro Eda S, Santa-Catarina C, Oliveira AE, Silveira V, de Souza Filho GA, Venancio TM, and Cruz MA
- Subjects
- Amino Acid Motifs, Amino Acid Sequence, Catalysis, Enzyme Inhibitors pharmacology, Evolution, Molecular, Genome, Plant, Molecular Conformation, Molecular Sequence Data, Phosphorylation, Phylogeny, Plant Roots metabolism, Sequence Homology, Amino Acid, Signal Transduction, Arabidopsis metabolism, Arabidopsis Proteins chemistry, Cell Cycle Proteins chemistry, Gene Expression Regulation, Plant, Protein Kinases chemistry, Protein Serine-Threonine Kinases chemistry, Protein-Tyrosine Kinases chemistry
- Abstract
In eukaryotes, protein kinases catalyze the transfer of a gamma-phosphate from ATP (or GTP) to specific amino acids in protein targets. In plants, protein kinases have been shown to participate in signaling cascades driving responses to environmental stimuli and developmental processes. Plant meristems are undifferentiated tissues that provide the major source of cells that will form organs throughout development. However, non-dividing specialized cells can also dedifferentiate and re-initiate cell division if exposed to appropriate conditions. Mps1 (Monopolar spindle) is a dual-specificity protein kinase that plays a critical role in monitoring the accuracy of chromosome segregation in the mitotic checkpoint mechanism. Although Mps1 functions have been clearly demonstrated in animals and fungi, its role in plants is so far unclear. Here, using structural and biochemical analyses here we show that Mps1 has highly similar homologs in many plant genomes across distinct lineages (e.g. AtMps1 in Arabidopsis thaliana). Several structural features (i.e. catalytic site, DFG motif and threonine triad) are clearly conserved in plant Mps1 kinases. Structural and sequence analysis also suggest that AtMps1 interact with other cell cycle proteins, such as Mad2 and MAPK1. By using a very specific Mps1 inhibitor (SP600125) we show that compromised AtMps1 activity hampers the development of A. thaliana seedlings in a dose-dependent manner, especially in secondary roots. Moreover, concomitant administration of the auxin IAA neutralizes the AtMps1 inhibition phenotype, allowing secondary root development. These observations let us to hypothesize that AtMps1 might be a downstream regulator of IAA signaling in the formation of secondary roots. Our results indicate that Mps1 might be a universal component of the Spindle Assembly Checkpoint machinery across very distant lineages of eukaryotes.
- Published
- 2012
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39. Polyamines, IAA and ABA during germination in two recalcitrant seeds: Araucaria angustifolia (Gymnosperm) and Ocotea odorifera (Angiosperm).
- Author
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Pieruzzi FP, Dias LL, Balbuena TS, Santa-Catarina C, dos Santos AL, and Floh EI
- Subjects
- Brazil, Endangered Species, Ocotea growth & development, Plant Growth Regulators metabolism, Seeds growth & development, Tracheophyta growth & development, Abscisic Acid metabolism, Germination physiology, Indoleacetic Acids metabolism, Ocotea metabolism, Seeds metabolism, Tracheophyta metabolism
- Abstract
Background and Aims: Plant growth regulators play an important role in seed germination. However, much of the current knowledge about their function during seed germination was obtained using orthodox seeds as model systems, and there is a paucity of information about the role of plant growth regulators during germination of recalcitrant seeds. In the present work, two endangered woody species with recalcitrant seeds, Araucaria angustifolia (Gymnosperm) and Ocotea odorifera (Angiosperm), native to the Atlantic Rain Forest, Brazil, were used to study the mobilization of polyamines (PAs), indole-acetic acid (IAA) and abscisic acid (ABA) during seed germination., Methods: Data were sampled from embryos of O. odorifera and embryos and megagametophytes of A. angustifolia throughout the germination process. Biochemical analyses were carried out in HPLC., Key Results: During seed germination, an increase in the (Spd + Spm) : Put ratio was recorded in embryos in both species. An increase in IAA and PA levels was also observed during seed germination in both embryos, while ABA levels showed a decrease in O. odorifera and an increase in A. angustifolia embryos throughout the period studied., Conclusions: The (Spd + Spm) : Put ratio could be used as a marker for germination completion. The increase in IAA levels, prior to germination, could be associated with variations in PA content. The ABA mobilization observed in the embryos could represent a greater resistance to this hormone in recalcitrant seeds, in comparison to orthodox seeds, opening a new perspective for studies on the effects of this regulator in recalcitrant seeds. The gymnosperm seed, though without a connective tissue between megagametophyte and embryo, seems to be able to maintain communication between the tissues, based on the likely transport of plant growth regulators.
- Published
- 2011
- Full Text
- View/download PDF
40. Antifungal activity of PvD1 defensin involves plasma membrane permeabilization, inhibition of medium acidification, and induction of ROS in fungi cells.
- Author
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Mello EO, Ribeiro SF, Carvalho AO, Santos IS, Da Cunha M, Santa-Catarina C, and Gomes VM
- Subjects
- Culture Media chemistry, Fungi metabolism, Antifungal Agents pharmacology, Cell Membrane Permeability drug effects, Defensins pharmacology, Fungi drug effects, Phaseolus chemistry, Plant Proteins pharmacology, Reactive Oxygen Species metabolism
- Abstract
In recent years, studies have demonstrated the function of many antimicrobial peptides against an extensive number of microorganisms that have been isolated from different plant species and that have been used as models for the study of various cellular processes linked to these peptides' activities. Recently, a new defensin from Phaseolus vulgaris (L.) seeds, named PvD(1,) was isolated and characterized. PvD(1) was purified through anion exchange and phase-reverse chromatography. PvD(1)'s antifungal activity was tested. A SYTOX Green uptake assay revealed that the defensin PvD(1) is capable of causing membrane permeabilization in the filamentous fungi Fusarium oxysporum, Fusarium solani, and Fusarium laterithium and in yeast strains Candida parapsilosis, Pichia membranifaciens, Candida tropicalis, Candida albicans, Kluyveromyces marxiannus, and Saccharomyces cerevisiae at a concentration of 100 μg/ml. Ultrastructural analysis of C. albicans and C. guilliermondii cells treated with this defensin revealed disorganization of both cytoplasmic content and the plasma membrane. PvD(1) is also able to inhibit glucose-stimulated acidification of the medium by yeast cells and filamentous fungi, as well as to induce the production of reactive oxygen species and nitric oxide in C. albicans and F. oxysporum cells.
- Published
- 2011
- Full Text
- View/download PDF
41. Differential proteome analysis of mature and germinated embryos of Araucaria angustifolia.
- Author
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Balbuena TS, Jo L, Pieruzzi FP, Dias LL, Silveira V, Santa-Catarina C, Junqueira M, Thelen JJ, Shevchenko A, and Floh EI
- Subjects
- Brazil, Databases, Genetic, Electrophoresis, Gel, Two-Dimensional, Germination physiology, Seeds chemistry, Seeds genetics, Seeds metabolism, Tracheophyta genetics, Tracheophyta growth & development, Plant Proteins genetics, Plant Proteins isolation & purification, Plant Proteins metabolism, Proteomics methods, Tracheophyta embryology
- Abstract
Araucaria angustifolia is an endangered Brazilian native conifer tree. The aim of the present work was to identify differentially expressed proteins between mature and germinated embryos of A. angustifolia, using one and two dimensional gel electrophoresis approaches followed by protein identification by tandem mass spectrometry. The identities of 32 differentially expressed protein spots from two dimensional gel maps were successfully determined, including proteins and enzymes involved in storage mobilization such as the vicilin-like storage protein and proteases. A label free approach, based on spectral counts, resulted in detection of 10 and 14 mature and germinated enriched proteins, respectively. Identified proteins were mainly related to energetic metabolism pathways, translational processes, oxidative stress regulation and cellular signaling. The integrated use of both strategies permitted a comprehensive protein expression overview of changes in germinated embryos in relation to matures, providing insights into the this process in a recalcitrant seed species. Applications of the data generated on the monitoring and control of in vitro somatic embryos were discussed., (Published by Elsevier Ltd.)
- Published
- 2011
- Full Text
- View/download PDF
42. Humic acid effect on catalase activity and the generation of reactive oxygen species in corn (Zea mays).
- Author
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Cordeiro FC, Santa-Catarina C, Silveira V, and de Souza SR
- Subjects
- Nitrates pharmacology, Nitric Oxide metabolism, Plant Roots drug effects, Plant Roots enzymology, Plant Roots growth & development, Plant Roots metabolism, Zea mays enzymology, Zea mays growth & development, Catalase metabolism, Humic Substances, Reactive Oxygen Species metabolism, Zea mays drug effects, Zea mays metabolism
- Abstract
Humic acids (HAs) have positive effects on plant physiology, but the molecular mechanisms underlying these events are only partially understood. The induction of root growth and emission of lateral roots (LRs) promoted by exogenous auxin is a natural phenomenon. Exogenous auxins are also associated with HA. Gas nitric oxide (NO) is a secondary messenger produced endogenously in plants. It is associated with metabolic events dependent on auxin. With the application of auxin, NO production is significantly increased, resulting in positive effects on plant physiology. Thus it is possible to evaluate the beneficial effects of the application of HA as an effect of auxin. To investigate the effects of HA the parameters of root growth, Zea mays was studied by evaluating the application of 3 mM C L⁻¹ of HA extracted from Oxisol and 100 µM SNP (sodium nitroprusside) and the NO donor, subject to two N-NO₃⁻, high dose (5.0 mM N-NO₃⁻) and low dose (5.0 mM N-NO₃⁻). Treatments with HA and NO were positively increased, regardless of the N-NO₃⁻ taken, as assessed by fresh weight and dry root, issue of LRs. The effects were more pronounced in the treatment with a lower dose of N-NO₃⁻. Detection of reactive oxygen species (ROS) in vivo and catalase activity were evaluated; these tests were associated with root growth. Under application of the bioactive substances tested, detection of ROS and catalase activity increased, especially in treatments with lower doses of N-NO₃⁻. The results of this experiment indicate that the effects of HA are dependent on ROS generation, which act as a messenger that induces root growth and the emission of LRs.
- Published
- 2011
- Full Text
- View/download PDF
43. Changes in the 2-DE protein profile during zygotic embryogenesis in the Brazilian Pine (Araucaria angustifolia).
- Author
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Balbuena TS, Silveira V, Junqueira M, Dias LL, Santa-Catarina C, Shevchenko A, and Floh EI
- Subjects
- Brazil, Electrophoresis, Gel, Two-Dimensional, Hydrogen-Ion Concentration, Plant Proteins chemistry, Plant Proteins classification, Plant Proteins metabolism, Proteomics, Seeds chemistry, Seeds growth & development, Seeds metabolism, Tandem Mass Spectrometry, Pinus embryology, Pinus metabolism
- Abstract
Araucaria angustifolia is the only native conifer of economic importance in the Brazilian Atlantic Rainforest. Due to a clear-cutting form of exploitation this species has received the status of vulnerable. The aim of this work was to investigate and characterize changes in protein expression profile during seed development of this endangered species. For this, the proteome of developing seeds was characterized by 2-DE and LC-MS/MS. Ninety six proteins were confidently identified and classified according to their biological function and expression profile. Overaccumulated proteins in early seed development indicated a higher control on oxidative stress metabolism during this phase. In contrast, highly expressed proteins in late stages revealed an active metabolism, leading to carbon assimilation and storage compounds accumulation. Comprehensive protein expression profiles and identification of overaccumulated proteins provide new insights into the process of embryogenesis in this recalcitrant species. Considerations on the improvement and control of somatic embryogenesis through medium manipulation and protein markers screening using data generated are also discussed.
- Published
- 2009
- Full Text
- View/download PDF
44. Polyamines induce rapid biosynthesis of nitric oxide (NO) in Arabidopsis thaliana seedlings.
- Author
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Tun NN, Santa-Catarina C, Begum T, Silveira V, Handro W, Floh EI, and Scherer GF
- Subjects
- Arginine pharmacology, Cyclic N-Oxides pharmacology, Fluorescence, Imidazoles pharmacology, Microscopy, Fluorescence, Nitric Oxide antagonists & inhibitors, Nitric Oxide metabolism, Plant Leaves cytology, Plant Leaves drug effects, Putrescine pharmacology, Rhodamines pharmacology, Spermine pharmacology, beta-Aminoethyl Isothiourea pharmacology, Arabidopsis drug effects, Arabidopsis metabolism, Nitric Oxide biosynthesis, Polyamines pharmacology, Seedlings drug effects, Seedlings metabolism
- Abstract
In this study, we examined the regulation by putrescine, spermidine and spermine of nitric oxide (NO) biosynthesis in Arabidopsis thaliana seedlings. Using a fluorimetric method employing the cell-impermeable NO-binding dye diaminorhodamine-4M (DAR-4M), we observed that the polyamines (PAs) spermidine and spermine greatly increased NO release in the seedlings, whereas arginine and putrescine had little or no effect. Spermine, the most active PA, stimulated NO release with no apparent lag phase. The response was quenched by addition of 2-aminoethyl-2-thiopseudourea (AET), an inhibitor of the animal nitric oxide synthase (NOS) and plant NO biosynthesis, and by 2-(4-carboxyphenyl)-4,4,5,5-tetramethylimidazoline-1-1-oxy-3-oxide (PTIO), an NO scavenger. By fluorescence microscopy, using the cell-permeable NO-binding dye diaminorhodamine-4M acetoxymethyl ester (DAR-4M AM), we observed that PAs induced NO biosynthesis in specific tissues in Arabidopsis seedlings. Spermine and spermidine increased NO biosynthesis in the elongation zone of the Arabidopsis root tip and in primary leaves, especially in the veins and trichomes, while in cotyledons little or no effect of PAs beyond the endogenous levels of NO-induced fluorescence was observed. We conclude that PAs induce NO biosynthesis in plants.
- Published
- 2006
- Full Text
- View/download PDF
45. [Public figures on trial: an assessment of the use of the "jury court" technique for city officials in Santa Catarina, Brazil].
- Author
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Conill EM, Pieralisi CA, Peres MA, Castilhos C, Ortiga AB, Li TT, and Nascimento S
- Subjects
- Brazil, Ethics, Professional education, Humans, Jurisprudence, Public Health Administration education, Social Responsibility, Workforce, Local Government, Public Health Administration legislation & jurisprudence
- Abstract
This study describes the 'Law Court' technique as applied to City Health Departments in the State of Santa Catarina, in dealing with the issue of obligations on the part of public officials. The project was the first part of a training course for public administrators held in 1997. The article presents the technique's components and results. Some 98% of the 156 participants had a positive opinion of the training course, considering it dynamic/participatory (31%), educational/stimulating reflection (27%), and realistic (24%). The technique fostered the discussion of the main subjects pertaining to the country's Unified Health System (SUS). Although all five juries acquitted the defendants, the issue of ethics was reported by 58% of the participants as the main prerequisite for a public administrator.
- Published
- 1998
- Full Text
- View/download PDF
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