79 results on '"Schneider NR"'
Search Results
2. Determination of Nitrate in Forages by Using Selective Ion Electrode: Collaborative Study
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Carlson Mp and Schneider Nr
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Reproducibility ,chemistry.chemical_compound ,Aqueous solution ,Chromatography ,Nitrate ,chemistry ,Electrode ,Analytical chemistry ,Electroanalytical method ,Forage ,General Chemistry ,Repeatability ,Diluent - Abstract
Each of 10 collaborating laboratories analyzed 4 blind duplicate pairs of forage samples for nitrate, by using a potentiometric method. Two forage controls and a 100 000 mg KNO3/L standard were also provided. Nitrate was extracted into an aqueous Al2(SO4)3 solution containing 70 mg KNO3/L and quantitated with a nitrate-selective electrode. Standards were prepared using extracting solution as diluent. Nitrate concentrations in forage samples ranged from
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- 1986
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3. A 45,XY,−22 primitive neuroectodermal tumor (PNET) of the brain and a 46,XY malignant rhabdoid tumor (MRT) of the kidney in a 6-month-old child
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Tonk, VS, Fort, DW, Timmons, CF, Tomlinson, GE, and Schneider, NR
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- 1993
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4. [Clamshell thoracotomy after thoracic knife wounds].
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Rudolph M, Schneider NR, and Popp E
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- Algorithms, Humans, Multiple Trauma diagnosis, Thoracic Injuries diagnosis, Treatment Outcome, Wounds, Penetrating diagnosis, Critical Care methods, Multiple Trauma surgery, Resuscitation methods, Thoracic Injuries surgery, Thoracotomy methods, Wounds, Penetrating surgery
- Abstract
Resuscitation in the event of traumatic cardiac arrest was for a long time considered to be a less than promising technique to employ; however, current data indicate that the prospects of success need not be any poorer than for resuscitation due to cardiac distress. The targeted and rapid remedying of reversible causes can re-establish the circulatory function and the European Resuscitation Council (ERC) algorithm for traumatic cardiac arrest is a helpful guide in this respect. This case report illustrates the resolute implementation of this algorithm in the prehospital environment in the case of an attempted suicide by a thoracic knife wound.
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- 2017
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5. Specific extra chromosomes occur in a modal number dependent pattern in pediatric acute lymphoblastic leukemia.
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Heerema NA, Raimondi SC, Anderson JR, Biegel J, Camitta BM, Cooley LD, Gaynon PS, Hirsch B, Magenis RE, McGavran L, Patil S, Pettenati MJ, Pullen J, Rao K, Roulston D, Schneider NR, Shuster JJ, Sanger W, Sutcliffe MJ, van Tuinen P, Watson MS, and Carroll AJ
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- Child, Cluster Analysis, Humans, Chromosome Aberrations, Chromosomes, Human, Precursor Cell Lymphoblastic Leukemia-Lymphoma genetics
- Abstract
Children with acute lymphoblastic leukemia (ALL) and high hyperdiploidy (>50 chromosomes) are considered to have a relatively good prognosis. The specific extra chromosomes are not random; extra copies of some chromosomes occur more frequently than those of others. We examined the extra chromosomes present in high hyperdiploid ALL to determine if there were a relation of the specific extra chromosomes and modal number (MN) and if the extra chromosomes present could differentiate high hyperdiploid from near-triploid and near-tetraploid cases. Karyotypes of 2,339 children with ALL and high hyperdiploidy at diagnosis showed a distinct nonrandom sequential pattern of gain for each chromosome as MN increased, with four groups of gain: chromosomes 21, X, 14, 6, 18, 4, 17, and 10 at MN 51-54; chromosomes 8, 5, 11, and 12 at MN 57-60; chromosomes 2, 3, 9,16, and 22 at MN 63-67; chromosomes 1, 7 13, 15, 19, and 20 at MN 68-79, and Y only at MN >or=80. Chromosomes gained at lower MN were retained as the MN increased. High hyperdiploid pediatric ALL results from a single abnormal mitotic division. Our results suggest that the abnormal mitosis involves specific chromosomes dependent on the number of chromosomes aberrantly distributed, raising provocative questions regarding the mitotic mechanism. The patterns of frequencies of tetrasomy of specific chromosomes differs from that of trisomies with the exception of chromosome 21, which is tetrasomic in a high frequency of cases at all MN. These results are consistent with different origins of high hyperdiploidy, near-trisomy, and near-tetrasomy.
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- 2007
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6. Cytogenetic evaluation of a large series of hepatoblastomas: numerical abnormalities with recurring aberrations involving 1q12-q21.
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Tomlinson GE, Douglass EC, Pollock BH, Finegold MJ, and Schneider NR
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- Humans, Karyotyping, Chromosome Aberrations, Chromosome Mapping, Chromosomes, Human, Pair 1, Hepatoblastoma genetics, Liver Neoplasms genetics
- Abstract
Hepatoblastoma is a malignant embryonal liver tumor that occurs almost exclusively in infants and very young children. Previous cytogenetic studies of hepatoblastoma have investigated small series or individual cases. This report is on the cytogenetics of a large series of 111 hepatoblastoma specimens, with cytogenetic results consecutively karyotyped over a 12-year period. Abnormal karyotypes were observed in 55 cases (approximately 50% of the total). Numerical aberrations were observed in 41 cases (36% of the total), particularly trisomies of chromosomes 2, 8, and 20. Chromosome losses were less common than chromosome gains. Structural abnormalities were observed in 43 cases (39% of the total). Unbalanced translocations resulting in trisomy 1q and involving breakpoints at 1q12-21 were the most common structural abnormality, observed in 20 tumors (18% of total cases); the corresponding translocated chromosome was highly varied. The previously reported t(1;4) was observed in seven cases. Most tumors with translocations involving 1q12-21 also displayed numerical chromosome aberrations, the most common of which were chromosomal trisomies, whereas tumors with other structural rearrangements had fewer numerical abnormalities.
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- 2005
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7. Translocation (10;17)(q22;p13): a recurring translocation in clear cell sarcoma of kidney.
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Rakheja D, Weinberg AG, Tomlinson GE, Partridge K, and Schneider NR
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- Chromosomes, Human, Pair 10, Chromosomes, Human, Pair 17, Humans, Infant, Karyotyping, Male, Sarcoma, Clear Cell pathology, Kidney Neoplasms genetics, Sarcoma, Clear Cell genetics, Translocation, Genetic
- Abstract
A clear cell sarcoma from the kidney of a 12-month-old male child manifested a balanced translocation, t(10;17)(q22;p13). This is the second report of this cytogenetic abnormality in renal clear cell sarcoma.
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- 2004
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8. Hepatic mesenchymal hamartoma with translocation involving chromosome band 19q13.4: a recurrent abnormality.
- Author
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Rakheja D, Margraf LR, Tomlinson GE, and Schneider NR
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- Chromosome Banding, Chromosomes, Human, Pair 11 ultrastructure, Chromosomes, Human, Pair 19 ultrastructure, Hamartoma pathology, Hamartoma surgery, Hepatectomy, Humans, Infant, Liver Neoplasms pathology, Liver Neoplasms surgery, Male, Mesoderm pathology, Chromosomes, Human, Pair 11 genetics, Chromosomes, Human, Pair 19 genetics, Hamartoma genetics, Liver Neoplasms genetics, Translocation, Genetic genetics
- Abstract
We report a case of mesenchymal hamartoma of the liver in an 8-month-old male child, in which the cytogenetic analysis revealed a balanced translocation, t(11;19)(q13;q13.4). This is the fifth description of a cytogenetic abnormality in mesenchymal hamartoma and is similar to the four cases reported previously in that one of the breakpoints involved chromosome band 19q13.4.
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- 2004
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9. Problems with ISCN FISH Nomenclature make it not practical for use in clinical test reports or cytogenetic databases [corrected].
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Mascarello JT, Cooley LD, Davison K, Dewald GW, Brothman AR, Herrman M, Park JP, Persons DL, Rao KW, Schneider NR, and Vance GH
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- Data Collection, Quality Control, Cytogenetic Analysis standards, In Situ Hybridization, Fluorescence standards, Laboratories standards, Terminology as Topic
- Abstract
Purpose: To assess the extent and the sources of variation in ISCN nomenclature used by participants in CAP/ACMG surveys dealing with fluorescence in situ hybridization (FISH)., Methods: Over 1600 nomenclature strings from 15 challenges in seven surveys were evaluated for the contributions of diagnostic errors, syntax errors, methodological differences, and technical factors not foreseen by ISCN 1995., Results: Although diagnostic errors were uncommon, syntax errors were numerous, approaching 50% of the responses for several challenges. Their frequency varied with the complexity of the nomenclature required to describe a test condition. Variation attributable to probe selection and band designation correlated with the number of probes available for addressing the diagnostic issue at hand. In the most dramatic example of this effect, a survey simulating diagnosis of trisomy 21 in uncultured amniocytes, there were 66 participants (of 99) who used the same general form for their nomenclature, but only 8 of the 66 had exactly the same nomenclature string. Participants used proprietary names, created their own nomenclature, or ignored the true complexity of probe systems when trying to describe conditions not foreseen by ISCN 1995., Conclusion: The use of current ISCN FISH nomenclature resulted in survey participants describing unique biological conditions in a multitude of different ways. In addition to making the nomenclature unsuitable for proficiency test purposes, this heterogeneity makes it impractical for clinical test reporting and for cytogenetic database management. Because methodological information contributes a large amount of variability, adds complexity, and increases opportunities for syntax errors, a system that excludes such information would be more effective.
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- 2003
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10. Proficiency testing for laboratories performing fluorescence in situ hybridization with chromosome-specific DNA probes.
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Mascarello JT, Brothman AR, Davison K, Dewald GW, Herrman M, McCandless D, Park JP, Persons DL, Rao KW, Schneider NR, Vance GH, and Cooley LD
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- Chromosome Aberrations, Genes, erbB-2, Humans, Quality Control, DNA Probes, In Situ Hybridization, Fluorescence standards, Laboratories standards
- Abstract
Objective: To assess laboratory performance, use, and limitations in the joint College of American Pathologists and American College of Medical Genetics proficiency testing program for laboratories performing cytogenetic tests based on fluorescence in situ hybridization (FISH)., Data Sources: Eight proficiency surveys dealing with FISH detection of microdeletions or microduplications, aneuploidy in interphase cells, gene amplification, and neoplasm-specific translocations. Participating laboratories used their own DNA probes (commercial or home-brew), hybridization methods, and analytic criteria to answer clinical questions about cases represented by slides included in the survey materials. They also described their test results according to the International System for Human Cytogenetic Nomenclature (ISCN) and answered supplementary questions relating to their experience with the subject test systems., Data Extraction: In addition to evaluating diagnostic accuracy, we evaluated survey use, laboratory experience, variation in methodologic approach, and the practicality of using ISCN nomenclature for describing test results., Synthesis and Conclusions: With the exception of one challenge, at least 80% of the participants reached the correct diagnostic conclusion. In the sole exception, there was still a consensus of 91.7% of participants with the same (albeit erroneous) diagnostic conclusion. The overall outstanding performance of participating laboratories clearly shows the reliability of current FISH methods. Despite the fact that a large number of laboratories reported little or no experience with the specific test systems, the overwhelming majority performed very well. This result shows that the program's strategy of targeting classes of abnormalities (vs a single abnormality associated with a specific disease) did not put at a disadvantage participants who did not routinely perform all of the potential tests in the class. The extraordinary variation in ISCN descriptions submitted by participants showed that the existing system for human cytogenetic nomenclature is not suitable for facile communication of FISH test results.
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- 2002
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11. Primary effusion lymphomas exhibit complex and recurrent cytogenetic abnormalities.
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Wilson KS, McKenna RW, Kroft SH, Dawson DB, Ansari Q, and Schneider NR
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- Adult, Antigens, CD analysis, Ascitic Fluid immunology, Biomarkers analysis, Genotype, Herpesvirus 8, Human, Humans, Immunophenotyping, Karyotyping, Lymphoma, AIDS-Related immunology, Lymphoma, AIDS-Related virology, Lymphoma, B-Cell immunology, Lymphoma, B-Cell virology, Male, Middle Aged, Chromosomes, Human, Pair 1, Chromosomes, Human, Pair 7, Lymphoma, AIDS-Related genetics, Lymphoma, B-Cell genetics, Trisomy
- Abstract
Cytogenetic findings in a few primary effusion lymphoma (PEL) cell lines have been reported, but only three complete karyotypes of primary specimens from patients with this neoplasm have been published. In this study, cytogenetic analysis was performed on 11 effusion specimens from 10 patients with PEL. We corroborate data obtained from the cell line studies that trisomy 7, trisomy 12 and aberrations in the proximal long arm of chromosome 1 (1q) are recurring cytogenetic aberrations in PEL and also identify breakpoints at 3q23, 7p22, 7q22, 10q24, 12q24, 13q22, 14q24, 14q32, 15p11.2 and Xq22 as well as +8, +15, +19, +X and -Y as recurring chromosome abnormalities. The identification of recurring cytogenetic aberrations may lead to delineation of the genetic events in PEL.
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- 2002
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12. Minimal prophylactic concentration of dietary zinc compounds in a mouse model of swine dysentery.
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Zhang P, Carlson MP, Schneider NR, and Duhamel GE
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- Animal Feed, Animals, Brachyspira hyodysenteriae drug effects, Dietary Supplements, Disease Models, Animal, Dysentery microbiology, Dysentery prevention & control, Female, Iron antagonists & inhibitors, Mice, Mice, Inbred C3H, Random Allocation, Spirochaetales Infections prevention & control, Swine, Swine Diseases microbiology, Weight Gain drug effects, Zinc pharmacology, Brachyspira hyodysenteriae growth & development, Dysentery veterinary, Spirochaetales Infections veterinary, Swine Diseases prevention & control, Zinc administration & dosage
- Abstract
Dietary supplementation with 6000 mg of Zn2+/kg of feed has been shown to modify the clinicopathologic expression of Brachyspira hyodysenteriae infection in a laboratory mouse model of swine dysentery. However, this concentration impaired the body weight gain of the mice. The purpose of the present study was to determine a minimal prophylactic concentration of feed-grade zinc compounds that would not affect the growth of mice challenge-exposed with B. hyodysenteriae. A total of 440, 6- to 8-week-old, C3H/HeN mice were allocated randomly to groups and fed either a defined diet or a defined diet containing either 1000, 2000 or 4000 mg/kg ZnO, ZnSO4 or zinc-methionine for 7 days before intragastric inoculation with B. hyodysenteriae. From days 7 to 35 after inoculation, mice in each group were necropsied at weekly intervals for determination of body weight, presence of B. hyodysenteriae in the cecum, and histological assessment of cecal lesions. Only ZnO fed at 2000 mg/kg had a prophylactic effect against B. hyodysenteriae infection without affecting the body weight gain of the mice. The prophylactic effect of Zn2+ against infection with B. hyodysenteriae was also affected by the relative concentration of Fe2+ and Zn2+/Fe2+ ratio of the diet.
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- 2001
13. Precursor B-cell lymphoblastic lymphoma. A study of nine cases lacking blood and bone marrow involvement and review of the literature.
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Maitra A, McKenna RW, Weinberg AG, Schneider NR, and Kroft SH
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- Adult, Aged, Antigens, Differentiation, B-Lymphocyte analysis, B-Lymphocytes classification, Bone Marrow Neoplasms diagnosis, Burkitt Lymphoma diagnosis, Child, Child, Preschool, Diagnosis, Differential, Female, Humans, Immunohistochemistry, Immunophenotyping, Karyotyping, Lymphoma, B-Cell blood, Lymphoma, B-Cell classification, Lymphoma, B-Cell genetics, Male, Precursor Cell Lymphoblastic Leukemia-Lymphoma blood, Precursor Cell Lymphoblastic Leukemia-Lymphoma classification, Precursor Cell Lymphoblastic Leukemia-Lymphoma genetics, Retrospective Studies, Stem Cells classification, Treatment Outcome, Lymphoma, B-Cell diagnosis, Precursor Cell Lymphoblastic Leukemia-Lymphoma diagnosis
- Abstract
We describe 9 cases of precursor B-cell lymphoblastic lymphoma (LYL) without evidence of marrow or blood involvement. Four patients had superficial nodal disease, 2 cutaneous involvement, and 1 each ovarian, retroperitoneal, or tonsillar primary tumor. Six patients had limited disease; 3 patients were stage III. Immunophenotyping revealed a terminal deoxynucleotidyl transferase (TdT)-positive, immature B-cell population with variable expression of CD10, CD20, and CD45. All patients are in complete clinical remission (median follow-up, 14 months). A literature review yielded 105 patients with a diagnosis of precursor B-cell LYL based on less than 25% marrow involvement. Of these, 64% were younger than 18 years. Skin, lymph nodes, and bone were the most common sites of disease. Mediastinal involvement was uncommon. TdT, CD19, CD79a, CD10, and HLA-DR were the most frequently expressed antigens, while CD45 and CD20 were expressed in only two thirds of the cases. Cytogenetic analysis showed additional 21q material as a recurring karyotypic abnormality. At a median follow-up of 26 months, 74% of patients were alive; the median survival was 19 months for patients dying of disease. Comparison with precursor B-cell acute lymphoblastic leukemia showed several overlapping features, although distinct differences were identified.
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- 2001
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14. Secondary myelodysplasia with monosomy 7 arising after treatment for acute lymphoblastic leukemia in childhood.
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Aquino VM, Schneider NR, and Sandler ES
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- Child, Humans, In Situ Hybridization, Fluorescence, Male, Neural Tube Defects genetics, Antineoplastic Combined Chemotherapy Protocols adverse effects, Chromosomes, Human, Pair 7, Monosomy, Neural Tube Defects chemically induced, Precursor Cell Lymphoblastic Leukemia-Lymphoma drug therapy, Precursor Cell Lymphoblastic Leukemia-Lymphoma genetics
- Abstract
Monosomy 7 is recognized as a characteristic, clonal abnormality associated with acquired myelodysplasia (MDS) or acute myeloid leukemia (AML). It can occur as a late complication of cytotoxic therapy and is usually associated with exposure to alkylating agents or radiation therapy. We report two patients with therapy-related myelodysplasia (t-MDS) associated with monosomy 7 occurring in children after completion of therapy for acute lymphoblastic leukemia (ALL). Both children were noted to have t-MDS with monosomy 7 at the time of cessation of chemotherapy. Neither child had received an alkylating agent or radiation therapy during treatment. One child had a unique dicentric marker chromosome that was shown by fluorescent in situ hybridization to be derived from chromosome 7. This report emphasizes the need to identify and minimize therapy-related side effects without compromising cure rates.
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- 2001
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15. New recurring cytogenetic abnormalities and association of blast cell karyotypes with prognosis in childhood T-cell acute lymphoblastic leukemia: a pediatric oncology group report of 343 cases.
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Schneider NR, Carroll AJ, Shuster JJ, Pullen DJ, Link MP, Borowitz MJ, Camitta BM, Katz JA, and Amylon MD
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- Adolescent, Adult, Aneuploidy, Burkitt Lymphoma genetics, Child, Child, Preschool, Chromosomes, Human, Pair 10, Chromosomes, Human, Pair 14, Female, Humans, Infant, Leukemia-Lymphoma, Adult T-Cell mortality, Male, Prognosis, Survival Rate, Translocation, Genetic, Chromosome Aberrations, Karyotyping, Leukemia-Lymphoma, Adult T-Cell genetics, Leukemia-Lymphoma, Adult T-Cell pathology
- Abstract
To further define the cytogenetic differences between B-cell lineage (B-lineage) acute lymphoblastic leukemia (ALL) and T-cell lineage ALL (T-ALL) and to determine the prognostic value of cytogenetics in childhood T-ALL, the blast cell karyotypes of 343 cases of pediatric T-ALL, the largest series reported to date, were evaluated. Cytogenetics were performed in a single central laboratory, and the children were treated using a single Pediatric Oncology Group protocol. Clear differences between the karyotypic characteristics of B-lineage ALL and T-ALL were confirmed. This study suggests that there may be survival differences associated with some T-ALL blast cell karyotypes. Better survival is associated with only normal karyotypes and with t(10;14) (translocation of chromosomes 10 and 14); worse survival is associated with the presence of any derivative chromosome. Two new recurring chromosome aberrations previously not reported in T-ALL were found: del(1)(p22) and t(8;12)(q13;p13). Ten aberrations found in this series, which were reported only once previously in T-ALL, can now be considered recurring abnormalities in T-ALL. All 12 of these new recurring aberrations are targets for discovery and characterization of new genes that are important in T-cell development and leukemogenesis.
- Published
- 2000
16. Mutations of the hSNF5/INI1 gene in renal rhabdoid tumors with second primary brain tumors.
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Savla J, Chen TT, Schneider NR, Timmons CF, Delattre O, and Tomlinson GE
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- Child, Preschool, Chromosomal Proteins, Non-Histone, Humans, Infant, Male, Neoplasms, Second Primary, SMARCB1 Protein, Transcription Factors, Brain Neoplasms genetics, DNA-Binding Proteins genetics, Kidney Neoplasms genetics, Mutation, Rhabdoid Tumor genetics
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- 2000
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17. Gas chromatography/mass spectrometry identification and quantification of isazophos in a famphur pour-on and in bovine tissues after a toxic exposure.
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Braselton WE, Johnson JL, Carlson MP, and Schneider NR
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- Animals, Brain enzymology, Cattle, Cattle Diseases etiology, Female, Gas Chromatography-Mass Spectrometry veterinary, Insecticides analysis, Organothiophosphorus Compounds analysis, Cattle Diseases chemically induced, Insecticides poisoning, Organothiophosphates chemistry, Organothiophosphorus Compounds poisoning
- Abstract
A sample identified as "Warbex pour-on," expected to contain 13.2% famphur, and bovine tissue samples from 2 heifers that died after exhibiting signs of organophosphate intoxication were analyzed by gas chromatography/mass spectrometry (GC/MS). A product formulation problem was suspected because brain cholinesterase activities were depressed in both animals. Electron impact (EI) GC/MS of the pour-on revealed 9.7% famphur and an unidentified peak with approximately 76% of the peak area of the famphur. The unidentified peak showed a molecular ion at m/z 313, with a single Cl isotope cluster. Methane chemical ionization (MeCI) MS confirmed the molecular weight at 313 (1 Cl). A search on the molecular formula C9H17N3O3PSCl yielded a single match, isazophos. EI and MeCI GC/MS of reference isazophos confirmed the identity of the suspect peak. The concentration of isazophos in the pour-on was determined to be 6.0%. Famphur and isazophos were identified by their EI spectra and GC retention times in extracts of liver and brain from the 2 deceased animals. A GC/MS procedure utilizing selected ion monitoring (SIM) was developed for quantification of isazophos in liver, kidney, muscle, and fat of additional affected animals sacrificed at various times after exposure. Isazophos remained in animal tissues for as long as 94 days after topical exposure. Isazophos was present in fetal liver 70 days after exposure of the dam. High levels (6-3,500 ppm) of isazophos and famphur remained on the skin at 39 days postexposure.
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- 2000
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18. Extensive analysis of mosaicism in a case of Turner syndrome: the experience of 287 cytogenetic laboratories. College of American Pathologists/American College of Medical Genetics Cytogenetics Resource Committee.
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Park JP, Brothman AR, Butler MG, Cooley LD, Dewald GW, Lundquist KF, Palmer CG, Patil SR, Rao KW, Saikevych IA, Schneider NR, and Vance GH
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- Adult, Female, Humans, In Situ Hybridization, Fluorescence, Karyotyping, Mosaicism genetics, Turner Syndrome genetics, Turner Syndrome pathology, X Chromosome
- Abstract
Objective: To assemble and interpret karyotype data provided as part of the College of American Pathologists/American College of Medical Genetics Cytogenetics Proficiency Testing Program., Data Sources, Extraction, and Synthesis: The Cytogenetics Resource Committee requested data on all cells analyzed in a 1994 whole-blood specimen challenge. In that study, 287 participating laboratories analyzed a total of 14297 cells derived from a sample drawn from an adult donor with Turner syndrome. This individual had previously been found to have mosaicism, including cell lines with X structural anomalies along with monosomy X, making this an excellent challenge for a multicenter cytogenetic survey., Results and Conclusions: Analysis of the data from this extensive study revealed mosaicism of up to 10 different sex chromosome complements involving the X chromosome with and without a small ring X or a derivative X chromosome. In the routine cytogenetic analysis performed by the participating laboratories, cell lines observed, in decreasing order of prevalence, included 45,X (n = 8357 cells), 46,X,r(X) (n = 3597), 46,X,der(X)t(X;X) (n = 2237), 46,XX (n = 93), 47,X,r(X),r(X) (n = 5), 47,X,der (X)t(X;X),der(X)t(X;X) (n = 3), 47,XX,r(X) (n = 2), and one observation each of 47,XX,der(X)t(X;X), 47,X,der(X)t (X;X),r(X), and 47,XXX. Our molecular cytogenetic data, as well as detailed analysis of G-banded chromosomes, suggest the nomenclature for these 2 abnormal X chromosomes as r(X)(p11.3q21.3) and der(X)t(X;X)(p11.3;q21.3), and we discuss models for the concomitant formation of these 2 entities. Both the degree of analysis and the extensive mosaicism that was discovered in this study are exceptional, and similar reported cases as well as possible mechanisms for the observed X chromosome instability are reviewed.
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- 1999
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19. Effects of supplementation of organic and inorganic combinations of copper, cobalt, manganese, and zinc above nutrient requirement levels on postpartum two-year-old cows.
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Olson PA, Brink DR, Hickok DT, Carlson MP, Schneider NR, Deutscher GH, Adams DC, Colburn DJ, and Johnson AB
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- Animals, Cobalt administration & dosage, Copper administration & dosage, Eating, Feces chemistry, Female, Liver metabolism, Manganese administration & dosage, Nutritional Requirements, Poaceae, Postpartum Period, Pregnancy, Pregnancy Rate, Weight Gain, Zinc administration & dosage, Animal Feed, Animal Husbandry methods, Animal Nutritional Physiological Phenomena, Cattle growth & development, Dietary Supplements, Nutritional Status, Trace Elements administration & dosage
- Abstract
The objective of this study was to determine whether a combination of Cu, Co, Mn, and Zn in an organic or inorganic form fed at higher than nutrient recommendations for 2-yr-old cows from calving to breeding would affect pregnancy rate, calving date, calf performance, and cow liver and serum mineral concentrations. Crossbred 2-yr-old cows were used after calving in 1994 (n = 127) and 1995 (n = 109). Cows were blocked by calving date to one of three treatments: 1) no supplemental minerals (CTL), 2) organic minerals (ORG), or 3) inorganic minerals (ING). Minerals were fed for the same daily intake for both organic and inorganic treatments: Cu (125 mg), Co (25 mg), Mn (200 mg), and Zn (360 mg). Cows were individually fed a mineral-protein supplement with grass hay from calving (February-March) to before breeding (May 15). Hay intakes were calculated using chromium oxide boluses to determine fecal output. Fecal excretion of minerals was calculated following trace element analysis of feces. Liver biopsies were obtained before calving, after calving (start of supplementation), at the end of supplementation, and in midsummer. Over 2 yr, more cows did not become pregnant (P < .01) in ORG (11/78) and ING (11/78) treatments than in CTL (0/80) treatments. A treatment x year interaction was found for day of conception. Cows in the ORG group conceived later (P < .01) than cows in the ING or CTL groups in 1994. In 1995, there was no difference (P > .10) in day of conception among groups. Liver Zn and Mn concentrations were not different (P > .10) and Cu concentrations increased (P < .01) for the ORG and ING groups. Cows in the ORG and ING groups had higher (P < .01) concentrations of Cu, Mn, and Zn in the feces than the CTL cows. Trace elements in the feces did not differ for ORG and ING groups. Results indicate that combinations of Cu, Co, Mn, and Zn fed at higher levels than are required reduced reproductive performance.
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- 1999
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20. Case report of a 22-week fetus with 47,XXX karyotype and multiple lower mesodermal defects.
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Hoang MP, Wilson KS, Schneider NR, and Timmons CF
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- Abnormalities, Multiple pathology, Adult, Fetal Death pathology, Gestational Age, Humans, Karyotyping, Sex Chromosome Aberrations pathology, Abnormalities, Multiple genetics, Fetal Death genetics, Mesoderm pathology, Sex Chromosome Aberrations genetics, Trisomy, X Chromosome
- Abstract
A 22-week stillborn fetus with 47,XXX karyotype had lower mesodermal defects consisting of irregular fusion of the sacral vertebrae, anal agenesis, multicystic dysplasia of a horseshoe kidney, a single umbilical artery, dysplastic ovaries, and uterine hypoplasia. This case provides additional evidence for an association between trisomy X and genitourinary defects including lower mesodermal defects sequence.
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- 1999
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21. Characterization of a breast cancer cell line derived from a germ-line BRCA1 mutation carrier.
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Tomlinson GE, Chen TT, Stastny VA, Virmani AK, Spillman MA, Tonk V, Blum JL, Schneider NR, Wistuba II, Shay JW, Minna JD, and Gazdar AF
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- Adult, Alleles, DNA, Neoplasm genetics, Exons, Female, Humans, Karyotyping, Pedigree, Polymorphism, Single-Stranded Conformational, Breast Neoplasms genetics, Breast Neoplasms pathology, Genes, BRCA1, Germ-Line Mutation, Heterozygote, Tumor Cells, Cultured
- Abstract
A tumor cell line, HCC1937, was established from a primary breast carcinoma from a 24-year-old patient with a germ-line BRCA1 mutation. A corresponding B-lymphoblastoid cell line was established from the patient's peripheral blood lymphocytes. BRCA1 analysis revealed that the tumor cell line is homozygous for the BRCA1 5382insC mutation, whereas the patient's lymphocyte DNA is heterozygous for the same mutation, as are at least two other family members' lymphocyte DNA. The tumor cell line is marked by multiple additional genetic changes including a high degree of aneuploidy, an acquired mutation of TP53 with wild-type allele loss, an acquired homozygous deletion of the PTEN gene, and loss of heterozygosity at multiple loci known to be involved in the pathogenesis of breast cancer. Comparison of the primary tumor with the cell line revealed the same BRCA1 mutation and an identical pattern of allele loss at multiple loci, indicating that the cell line had maintained many of the properties of the original tumor. This breast tumor-derived cell line may provide a useful model system for the study of familial breast cancer pathogenesis and for elucidating BRCA1 function and localization.
- Published
- 1998
22. The first recurring chromosome translocation in hepatoblastoma: der(4)t(1;4)(q12;q34).
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Schneider NR, Cooley LD, Finegold MJ, Douglass EC, and Tomlinson GE
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- Chromosome Banding, Gene Deletion, Hepatoblastoma pathology, Humans, Infant, Karyotyping, Liver Neoplasms pathology, Male, Chromosomes, Human, Pair 1 genetics, Chromosomes, Human, Pair 4 genetics, Hepatoblastoma genetics, Liver Neoplasms genetics, Translocation, Genetic genetics
- Abstract
We report four cases of hepatoblastoma with a derivative chromosome 4 from an unbalanced translocation between the long arms of chromosomes 1 and 4, an aberration reported only rarely in isolated cases of other types of neoplasms. The abnormality in three hepatoblastomas was der(4)t(1;4)(q12;q34), whereas the fourth case appeared to have a der(4)t(q25;q32). All had hyperdiploid tumor karyotypes; however, in the case with t(q25;q32), the der(4) was the only abnormality in the stemline. We speculate that the oncogenetic event in our cases may be the loss of a gene on distal 4q or their alteration by juxtaposition to 1q12 heterochromatin.
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- 1997
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23. All patients with the T(11;16)(q23;p13.3) that involves MLL and CBP have treatment-related hematologic disorders.
- Author
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Rowley JD, Reshmi S, Sobulo O, Musvee T, Anastasi J, Raimondi S, Schneider NR, Barredo JC, Cantu ES, Schlegelberger B, Behm F, Doggett NA, Borrow J, and Zeleznik-Le N
- Subjects
- Adolescent, Adult, CREB-Binding Protein, Child, Child, Preschool, Chromosome Mapping, Female, Histone-Lysine N-Methyltransferase, Humans, In Situ Hybridization, Fluorescence, Leukemia chemically induced, Leukemia pathology, Male, Middle Aged, Myelodysplastic Syndromes chemically induced, Myelodysplastic Syndromes pathology, Myeloid-Lymphoid Leukemia Protein, Neoplasms radiotherapy, Neoplasms, Second Primary chemically induced, Topoisomerase II Inhibitors, Zinc Fingers, Antineoplastic Agents adverse effects, Chromosomes, Human, Pair 11, Chromosomes, Human, Pair 16, DNA-Binding Proteins genetics, Leukemia drug therapy, Leukemia genetics, Myelodysplastic Syndromes genetics, Neoplasms drug therapy, Neoplasms, Second Primary genetics, Nuclear Proteins genetics, Proto-Oncogenes, Trans-Activators, Transcription Factors genetics, Translocation, Genetic
- Abstract
The involvement of 11q23-balanced translocations in acute leukemia after treatment with drugs that inhibit the function of DNA topoisomerase II (topo II) is being recognized with increasing frequency. We and others have shown that the gene at 11q23 that is involved in all of these treatment-related leukemias is MLL (also called ALL1, Htrx, and HRX). In general, the translocations in these leukemias are the same as those occurring in de novo leukemia [eg, t(9;11), t(11;19), and t(4;11)], with the treatment-related leukemias accounting for no more than 5% to 10% of any particular translocation type. We have cloned the t(11;16)(q23;p13.3) and have shown that it involves MLL and CBP (CREB binding protein). The CBP gene was recently identified as a partner gene in the t(8;16) that occurs in acute myelomonocytic leukemia (AML-M4) de novo and rarely in treatment-related acute myeloid leukemia. We have studied eight t(11;16) patients, all of whom had prior therapy with drugs targetting topo II with fluorescence in situ hybridization (FISH) using a probe for MLL and a cosmid contig covering the CBP gene. Both probes were split in all eight patients and the two derivative (der) chromosomes were each labeled with both probes. Use of an approximately 100-kb PAC located at the breakpoint of chromosome 16 from one patient revealed some variability in the breakpoint because it was on the der(16) in three patients, on the der(11) in another, and split in four others. We assume that the critical fusion gene is 5'MLL/3'CBP. Our series of patients is unusual because three of them presented with a myelodysplastic syndrome (MDS) most similar to chronic myelomonocytic leukemia (CMMoL) and one other had dyserythropoiesis; MDS is rarely seen in 11q23 translocations either de novo or with t-AML. Using FISH and these same probes to analyze the lineage of bone marrow cells from one patient with CMMoL, we showed that all the mature monocytes contained the fusion genes as did some of the granulocytes and erythroblasts; none of the lymphocytes contained the fusion gene. The function of MLL is not well understood, but many domains could target the MLL protein to particular chromatin complexes. CBP is an adapter protein that is involved in regulating transcription. It is also involved in histone acetylation, which is thought to contribute to an increased level of gene expression. The fusion gene could alter the CBP protein such that it is constitutively active; alternatively, it could modify the chromatin-association functions of MLL.
- Published
- 1997
24. Cytogenetics as an adjunct in establishing a definitive diagnosis of synovial sarcoma by fine-needle aspiration.
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Saboorian MH, Ashfaq R, Vandersteenhoven JJ, and Schneider NR
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- Adult, Biopsy, Needle, Cytogenetics, DNA, Neoplasm analysis, Diagnosis, Differential, Humans, Ifosfamide therapeutic use, Karyotyping, Male, Middle Aged, Sarcoma, Synovial genetics, Soft Tissue Neoplasms genetics, Sarcoma, Synovial diagnosis, Soft Tissue Neoplasms diagnosis
- Abstract
Background: Synovial sarcomas account for up to 10% of all soft tissue sarcomas and are characterized by a specific chromosomal abnormality, t(X; 18)(p11.2; q11.2), that is observed in both monophasic and biphasic variants., Methods: A 9-cm suprascapular mass in a 43-year-old man and a 10-cm leg mass in a 45-year-old man were aspirated. Rapid evaluation of air-dried Diff-Quick-stained smears in both cases showed a malignant spindle cell lesion. Cytogenetic material was collected in RPMI 1640 tissue culture medium. Additional alcohol-fixed slides and cell blocks were prepared on both cases. Immunohistochemical studies were performed on paraffin embedded cell block sections in both cases whereas electron microscopic examination was performed in one case. G-banded chromosome preparations from tumor cells were made after short term culture using standard cytogenetic techniques., Results: Evaluation of the smears showed densely cellular and tightly cohesive malignant spindle cells without discernible epithelial differentiation. A differential diagnosis of synovial sarcoma, leiomyosarcoma, malignant schwannoma, and fibrosarcoma was considered. Immunohistochemical stains and electron microscopy were noncharacteristic and noncontributory in establishing a diagnosis. However, cytogenetic results revealed a t(X; 18)(p11.2; q11.2) translocation, thus establishing the diagnosis of synovial sarcoma. Both patients were offered definitive therapy based on fine-needle aspiration (FNA) diagnosis only., Conclusions: FNA can be used effectively to obtain karyotypes of sarcomas. The specific cytogenetic abnormality associated with synovial sarcoma provides an opportunity to make definitive diagnoses using a combination of FNA and cytogenetics, obviating open surgical biopsy preceding therapy.
- Published
- 1997
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25. Prune-belly syndrome and other anomalies in a stillborn fetus with a ring X chromosome lacking XIST.
- Author
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Guillén DR, Lowichik A, Schneider NR, Cohen DS, Garcia S, and Zinn AR
- Subjects
- Adolescent, Chromosome Banding, Female, Fetal Death, Humans, In Situ Hybridization, Fluorescence, Infant, Newborn, Karyotyping, RNA, Long Noncoding, Transcription Factors deficiency, Abnormalities, Multiple genetics, Gene Deletion, Prune Belly Syndrome genetics, RNA, Untranslated, Ring Chromosomes, Transcription Factors genetics, X Chromosome
- Abstract
Ring X chromosomes that lack the X inactivation center and fail to be inactivated have been implicated as a cause of mental retardation and multiple congenital anomalies. We report on a stillborn fetus with karyotype mos45,X/46,X,r(X) and early urethral obstruction or prune-belly sequence, single umbilical artery, limb deficiency, horseshoe kidney, cardiac hypertrophy, persistent left superior vena cava, and axial skeleton abnormalities. Fluorescent in situ hydridization (FISH) studies confirmed that the ring chromosome is X-derived and demonstrated that it lacks the XIST locus. The findings in this fetus are discussed with regard to the spectrum of phenotypes associated with monosomy X and small ring X chromosomes.
- Published
- 1997
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26. Pilot studies for proficiency testing using fluorescence in situ hybridization with chromosome-specific DNA probes: a College of American Pathologists/American College of Medical Genetics Program.
- Author
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Dewald GW, Brothman AR, Butler MG, Cooley LD, Patil SR, Saikevych IA, and Schneider NR
- Subjects
- Humans, Pathology, Clinical methods, Pathology, Clinical standards, Pilot Projects, Quality Control, Reproducibility of Results, Sensitivity and Specificity, Societies, Medical, United States, Chromosome Mapping methods, DNA Probes, In Situ Hybridization, Fluorescence methods
- Abstract
Fluorescence in situ hybridization using chromosome-specific DNA probes is rapidly becoming part of clinical laboratory practice for certain congenital and neoplastic disorders. Current legislation requires proficiency testing for clinical laboratory studies. To evaluate the efficacy of fluorescence in situ hybridization proficiency testing, we invited 19 representative institutions to participate in three pilot studies. One study used probes for the X and Y chromosomes to evaluate metaphase spreads and interphase nuclei. Another study used probes for bcr and abl to detect bcr/abl fusion in interphase nuclei in chronic myelogenous leukemia. The third study used a D22S75 probe to detect microdeletions in metaphase spreads from a patient with velocardiofacial syndrome. The results of these studies demonstrate that proficiency testing with fluorescence in situ hybridization is attainable using either metaphase or interphase preparations, and that either microscope slides or fixed cell pellets are suitable.
- Published
- 1997
27. Hepatitis and increased copper levels in a dalmatian.
- Author
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Cooper VL, Carlson MP, Jacobson J, and Schneider NR
- Subjects
- Animals, Copper analysis, Dogs, Female, Hepatitis, Animal pathology, Hysterectomy, Leukocyte Count, Macrophages pathology, Necrosis, Neutrophils pathology, Ovariectomy, Copper metabolism, Dog Diseases, Hepatitis, Animal metabolism
- Published
- 1997
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28. Report of a complex karyotype in recurrent metastatic fibrolamellar hepatocellular carcinoma and a review of hepatocellular carcinoma cytogenetics.
- Author
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Lowichik A, Schneider NR, Tonk V, Ansari MQ, and Timmons CF
- Subjects
- Adolescent, Carcinoma, Hepatocellular pathology, Chromosome Aberrations genetics, Chromosome Disorders, Humans, Karyotyping, Liver Neoplasms pathology, Male, Carcinoma, Hepatocellular genetics, Liver Neoplasms genetics
- Abstract
Metastatic fibrolamellar hepatocellular carcinoma (HCC) was detected in the abdominal lymph nodes of an adolescent male after resection of the primary tumor. No dividing cells were isolated from attempted cytogenetic studies of the primary tumor. However, cytogenetic analysis of lymph node metastases detected 9 and 12 months after partial hepatectomy revealed abnormal hypertriploid karyotypes, with a suggestion of clonal evolution: 62-92 < 3n >,XX, -Y, +3, +6, +6, +7, +7, +8, +10, +13, +15, +16, +20, -21, -22, +mar1 x 2, +mar[cp6]/46,XY[8] and 78 < 3n >,XX, -Y,der(1)t(1;1)(p36.1;q21), +4, +6, +6, +7, +7,i(8)(q10), +10, +15, +20, -21, -22, +mar1 x 2, +mar2[3]/46, XY[17], respectively. Karyotypes of this variant of HCC have not been reported previously. The cytogenetics of HCC are reviewed.
- Published
- 1996
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29. Primary body cavity-based AIDS-related lymphomas.
- Author
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Ansari MQ, Dawson DB, Nador R, Rutherford C, Schneider NR, Latimer MJ, Picker L, Knowles DM, and McKenna RW
- Subjects
- Adult, Ascitic Fluid pathology, Ascitic Fluid virology, Chromosome Aberrations, Electrophoresis, Polyacrylamide Gel, Flow Cytometry, Herpesvirus 4, Human genetics, Herpesvirus 4, Human isolation & purification, Homosexuality, Male, Humans, Immunophenotyping, Karyotyping, Lymphoma, AIDS-Related genetics, Lymphoma, AIDS-Related immunology, Male, Middle Aged, Pleural Effusion, Malignant pathology, Pleural Effusion, Malignant virology, Polymerase Chain Reaction, Sarcoma, Kaposi virology, Herpesviridae isolation & purification, Lymphoma, AIDS-Related pathology, Lymphoma, AIDS-Related virology
- Abstract
Five patients with advanced AIDS developed a unique type of high grade primary body cavity-based non-Hodgkin's lymphoma (NHL). The lymphomas were exclusively in serous effusions with no detectable mass disease in the body cavities and no lymphadenopathy or organomegaly. All of the lymphomas exhibited virtually identical morphology, which could not be precisely classified, but appeared to bridge features of large cell immunoblastic and anaplastic large cell lymphomas. Immunophenotypically the lymphoma cells lacked expression of any B- or T-lymphocyte antigens, but expressed CD45 and the activation antigens CD30, CD38, CD71, and HLA-DR. Clonally rearranged immunoglobulin heavy chain and kappa light chain genes were identified by Southern blot analysis. Molecular studies also revealed Epstein-Barr virus (EBV) and Kaposi's sarcoma-associated herpesvirus (KSHV) genomes and germline configuration of the c-myc protooncogene. In two cases studied cytogenetically, the lymphoma cells manifested complex chromosome abnormalities. These lymphomas are clinically and biologically unique and found predominantly in patients with advanced AIDS, in many cases with pre-existing Kaposi's sarcoma.
- Published
- 1996
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30. Identification and molecular confirmation of a small chromosome 10q duplication [dir dup(10)(q24.2-->q24.3)] inherited from a mother mosaic for the abnormality.
- Author
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Tonk V, Schneider NR, Delgado MR, Mao J, and Schultz RA
- Subjects
- Child, Child, Preschool, Chromosome Banding, Chromosome Mapping, Cosmids, Female, Humans, In Situ Hybridization, Fluorescence, Intelligence Tests, Karyotyping, Male, Mosaicism, Mothers, Trisomy, Chromosome Aberrations, Chromosomes, Human, Pair 10, Developmental Disabilities genetics, Genomic Imprinting
- Abstract
We describe a family in which two siblings exhibited developmental delay, reduced muscle tone and mild muscle weakness. Cytogenetic evaluation demonstrated that both children had a tandem duplication of a small portion of the long arm of chromosome 10 [46,XX or XY,dir dup(10)(q24.2-->q24.3)], inherited from their clinically normal mother, who was found to be mosaic for the duplicated chromosome 10. Fluorescence in situ hybridization approaches, including total chromosome painting and the use of regional specific cosmid probes, were used to confirm the chromosome 10q origin of the duplicated material. This is the smallest confirmed duplication of this portion of chromosome 10 reported to date.
- Published
- 1996
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31. Risk of chromosomal abnormalities, with emphasis on live-born offspring of young mothers.
- Author
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Little BB, Ramin SM, Cambridge BS, Schneider NR, Cohen DS, Snell LM, Harrod MJ, and Johnston WL
- Subjects
- Adolescent, Adult, Amniocentesis, Child, Chromosomes, Human, Pair 13, Chromosomes, Human, Pair 18, Down Syndrome genetics, Humans, Karyotyping, Maternal Age, Middle Aged, Risk Factors, Chromosome Aberrations genetics, Mothers
- Abstract
In a large public urban hospital obstetrics service with > 123,000 deliveries in a 10-year period (1980-89), the frequencies (0.12%) of any type of chromosomal abnormality and of trisomy syndromes were analyzed for maternal age-related risk, by logistic regression. Focusing on very young gravidas, we found that in the study period there were 9,332 births (7.5% of all deliveries) to mothers < or = 16 years old. Estimated risks of chromosomal abnormalities among offspring associated with very young maternal age (9-16 years) were similar to those age-associated risks of mothers 20-29 years old. Risks of chromosomal abnormalities increase with advancing maternal age and are independent of ethnicity.
- Published
- 1995
32. Renal cell carcinoma with translocation (X;1). Further evidence for a cytogenetically defined subtype.
- Author
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Tonk V, Wilson KS, Timmons CF, Schneider NR, and Tomlinson GE
- Subjects
- Adolescent, Carcinoma, Renal Cell pathology, Chromosome Aberrations genetics, Humans, Karyotyping, Kidney Neoplasms pathology, Male, Carcinoma, Renal Cell genetics, Chromosomes, Human, Pair 1, Kidney Neoplasms genetics, Translocation, Genetic genetics, X Chromosome
- Abstract
A renal cell carcinoma from a 15-year-old male had a 49,Y,t(X;1)(p11.2;q21), +der(X)t(X;1) (p11.2;q21), +5, -16, +17, +18 karyotype. This is the third report of a translocation involving a breakpoint at Xp11.2 in a renal cell carcinoma in a child. A total of nine cases of renal cell carcinoma involving Xp11, including this case, have been reported. Of the eight cases for which there are genetics reports, all are male. Patients with renal cell carcinoma with abnormalities at Xp11 appear to be younger than renal cell carcinoma patients overall.
- Published
- 1995
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33. Prophylactic effect of dietary zinc in a laboratory mouse model of swine dysentery.
- Author
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Zhang P, Duhamel GE, Mysore JV, Carlson MP, and Schneider NR
- Subjects
- Animal Feed, Animals, Dysentery microbiology, Dysentery prevention & control, Female, Mice, Spirochaetales Infections prevention & control, Swine, Brachyspira hyodysenteriae drug effects, Dysentery veterinary, Spirochaetales Infections veterinary, Swine Diseases prevention & control, Zinc pharmacology
- Abstract
Reduced prevalence of diarrhea and mortality has been reported after dietary supplementation with zinc compounds in swine with naturally acquired colibacillosis and those challenge-exposed with Serpulina hyodysenteriae; however, the usefulness of this approach for control of enteric diseases of swine remains to be determined. To examine the effect of dietary zinc-containing compounds on the colonization and development of cecal lesions associated with S hyodysenteriae infection, a defined diet alone or with added ZnO, ZnSO4, or Zn-methionine complex to a final concentration of approximately 6,000 mg of Zn2+/kg of complete feed was fed ad libitum to 156 female mice (strain C3H/HeN) for 10 days prior to oral inoculation either with S hyodysenteriae or sterile trypticase soy broth. Rations were continued for 42 days, while at weekly intervals, 3 mice/group were necropsied for determination of body weight, cecal weight, liver zinc concentration, presence of S hyodysenteriae in the cecum, and gross and histologic assessments of cecal lesions. From postinoculation day 0 to 42, the liver zinc concentration of mice fed the zinc-supplemented diets was approximately twice that of mice fed the basal diet, irrespective of the source of zinc. From postinoculation day 7 through 42, the overall recovery rate of S hyodysenteriae in infected mice fed the basal diet was 77.8%. In contrast, recovery rates of S hyodysenteriae from S hyodysenteriae-inoculated mice fed the zinc-supplemented diets were 0% for Zn-methionine and ZnO and 16.7% for ZnSO4. Mice fed the basal diet had significantly (P < 0.05) higher weight gain than mice fed the zinc-supplemented diets.(ABSTRACT TRUNCATED AT 250 WORDS)
- Published
- 1995
34. Interstitial deletions 4q21.1q25 and 4q25q27: phenotypic variability and relation to Rieger anomaly.
- Author
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Kulharya AS, Maberry M, Kukolich MK, Day DW, Schneider NR, Wilson GN, and Tonk V
- Subjects
- Bone and Bones abnormalities, Facial Bones abnormalities, Female, Humans, Infant, Male, Phenotype, Syndrome, Abnormalities, Multiple genetics, Chromosome Deletion, Chromosomes, Human, Pair 4
- Abstract
We describe clinical and chromosomal findings in two patients with del(4q). Patient 1, with interstitial deletion (4)(q21.1q25), had craniofacial and skeletal anomalies and died at 8 months of hydrocephalus. Patient 2, with interstitial deletion (4)(q25q27), had craniofacial and skeletal anomalies with congenital hypotonia and developmental delay. These patients shared certain manifestations with other del(4q) patients but did not have Rieger anomaly. Clinical variability among patients with interstitial deletions of 4q may be related to variable expression, variable deletion, or imprinting of genes within the 4q region.
- Published
- 1995
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35. Rhabdoid tumor of the kidney with primitive neuroectodermal tumor of the central nervous system: associated tumors with different histologic, cytogenetic, and molecular findings.
- Author
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Fort DW, Tonk VS, Tomlinson GE, Timmons CF, and Schneider NR
- Subjects
- Brain Neoplasms pathology, Cytogenetics, Humans, Immunohistochemistry, In Situ Hybridization, Fluorescence, Infant, Kidney Neoplasms pathology, Male, Neoplasms, Multiple Primary pathology, Neuroectodermal Tumors, Primitive pathology, Rhabdoid Tumor pathology, Brain Neoplasms genetics, Kidney Neoplasms genetics, Neoplasms, Multiple Primary genetics, Neuroectodermal Tumors, Primitive genetics, Rhabdoid Tumor genetics
- Abstract
Rhabdoid tumor of the kidney (RTK) is associated with tumors of the central nervous system (CNS) in approximately 15% of cases. We describe the clinical features, histologic and cytogenetic findings, and molecular analysis of renal and CNS tumors from the same patient. The histology of the renal tumor was consistent with rhabdoid tumor. The CNS tumor was a primitive neuroectodermal tumor (PNET). The karyotype of the RTK was normal male. The PNET of the brain demonstrated monosomy 22 as the only cytogenetic abnormality, similar to reported cases of malignant rhabdoid tumor of the brain, but dissimilar to nonrandom cytogenetic findings in other CNS PNETs. Molecular cytogenetic and DNA marker studies confirmed loss of chromosome 22 in this patient's brain tumor. DNA allelotyping showed retention of both parental chromosome 22 alleles in the RTK and loss of the maternal allele in the PNET. Evaluation of additional RTKs and brain tumors occurring in the same patient may provide insight into the origins and relationships of these enigmatic tumors.
- Published
- 1994
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36. Trisomy 2, trisomy 20, and del(17p) as sole chromosomal abnormalities in three cases of hepatoblastoma.
- Author
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Tonk VS, Wilson KS, Timmons CF, and Schneider NR
- Subjects
- Female, Humans, Infant, Karyotyping, Male, Chromosome Deletion, Chromosomes, Human, Pair 17, Chromosomes, Human, Pair 2, Chromosomes, Human, Pair 20, Hepatoblastoma genetics, Liver Neoplasms genetics, Trisomy genetics
- Abstract
Short-term cultures of three hepatoblastomas were analyzed cytogenetically. Trisomy 2, trisomy 20, and a deletion of 17p were found as the sole abnormalities, yielding the karyotypes 47,XY, + 2; 47,XX, + 20; and 46,XX,del(17)(p12)/46,XX. This is the first reported case of deletion of 17p as the sole chromosomal abnormality in a hepatoblastoma and the first reported case of trisomy 20 without double minute chromosomes as a sole chromosomal abnormality in hepatoblastoma.
- Published
- 1994
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37. Cytogenetic evaluation of childhood neoplasms.
- Author
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Schneider NR
- Subjects
- Child, Humans, Karyotyping, Chromosome Aberrations, Leukemia genetics, Neoplasms genetics
- Abstract
The cytogenetics of childhood neoplasms are reviewed. Chromosome abnormalities specific for various pediatric neoplasms can provide diagnostic, prognostic, and scientific information of value to the pathologist, clinician, and molecular biologist. Karyotypes of acute leukemia have independent prognostic significance. Chromosome aberrations associated with several of the small round blue-cell tumors of childhood can clarify the diagnosis. Recurring abnormalities in several tumors, such as hepatoblastomas, primitive neuroectodermal tumors, fibrosarcomas, and other tumor types, suggest interesting questions about pathogenesis and histogenetic relationships. Several tumor-specific chromosome aberrations, mostly in the acute leukemias, have been characterized at a molecular level.
- Published
- 1993
38. Three cases of dup(10p)/del(10q) syndrome resulting from maternal pericentric inversion.
- Author
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Kulharya AS, Schneider NR, and Wilson GN
- Subjects
- Child, Preschool, Female, Fetal Death, Gene Rearrangement, Humans, Infant, Newborn, Karyotyping, Male, Polycystic Kidney Diseases genetics, Syndrome, Translocation, Genetic, Abnormalities, Multiple genetics, Chromosome Inversion, Chromosomes, Human, Pair 10, Gene Deletion
- Abstract
Two families and 3 patients with dup(10p)/del(10q) syndrome segregating from a maternal pericentric inversion are described, including a stillborn female with Potter sequence and multicystic renal dysplasia. Comparison of 32 dup(10p) patients to 11 del(10)(q25) patients emphasized dolichocephaly, wide sutures, frontal bossing, micrognathia, and renal defects as distinguishing characteristics of the dup(10p) syndrome. The 3 new and 6 previously reported dup(10p)/del(10q) patients had several manifestations in common with the dup(10p) and del(10q) syndromes, but were more typical of dup(10p) syndrome with respect to all 5 distinguishing characters.
- Published
- 1993
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39. Proficiency testing in clinical cytogenetics. A 6-year experience with photographs, fixed cells, and fresh blood.
- Author
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Hoeltge GA, Dewald G, Palmer CG, David-Nelson MA, Saikevych I, Patil S, Schwartz S, Schneider NR, and Herrmann M
- Subjects
- Chromosome Aberrations diagnosis, Chromosome Disorders, Humans, Karyotyping, Clinical Competence, Cytogenetics, Pathology, Clinical standards
- Abstract
The College of American Pathologists and the American Society of Human Genetics offer a proficiency testing program in clinical cytogenetics. Two hundred twenty-five laboratories now provide data for this survey, which was begun in 1986. Challenges have consisted of photographed metaphases, fixed lymphoblastoid cell suspensions, fresh peripheral blood, and disarranged karyotypes. The "correct" response was based on 80% or greater consensus among either the referees or the participants. Referee laboratories performed better than participants. More laboratories were able to report accurate recognition of abnormalities by using a coded list than could write the interpretation in standardized nomenclature. Deletions, unbalanced translocations, and inversions were more difficult challenges than balanced translocations or trisomies. Prenatal and lymphocyte challenges were more likely to result in consensus than were bone marrow challenges. Participants performed best on whole-blood challenges. Fixed cell suspensions were less satisfactory. Excellent quality case material is essential for a successful challenge. A grading system has been devised to separate artifacts of the survey process from proficiency variables.
- Published
- 1993
40. In situ hybridization shows direct evidence of skewed X inactivation in one of monozygotic twin females manifesting Duchenne muscular dystrophy.
- Author
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Zneimer SM, Schneider NR, and Richards CS
- Subjects
- Chromosome Banding, DNA Probes, Dystrophin genetics, Female, Gene Deletion, Genes, Recessive, Genetic Linkage, Humans, In Situ Hybridization, Diseases in Twins genetics, Dosage Compensation, Genetic, Muscular Dystrophies genetics, Twins, Monozygotic
- Abstract
A novel combination of conventional and molecular cytogenetic techniques was used to investigate the expression of an X-linked recessive disorder in one of monozygotic (MZ) twin females. These twins carry a deletion, approximately 300 kb in length, in one of their X chromosomes within the dystrophin gene, which is responsible for Duchenne muscular dystrophy (DMD) in one twin [Richards et al.: Am J Hum Genet 46:672-681, 1990]. A unique DNA fragment generated from an exon within this gene deletion was hybridized in situ to both twins' metaphase chromosomes, a probe which would presumably hybridize only to the normal X chromosome and not to the X chromosome carrying the gene deletion. Chromosomes were identified by reverse-banding (R-banding) and by the addition of 5-bromodeoxyuridine (BrdU) in culture to distinguish early and late replicating X chromosomes, corresponding to active and inactive X chromosomes, respectively. Hybridization experiments showed predominant inactivation of the normal X chromosome in the twin with DMD. This is the first report showing direct evidence at the chromosome level of unequal inactivation of cytogenetically normal X chromosomes resulting in the manifestation of an X-linked recessive disorder in one of monozygotic twin females. This study may now facilitate other research of unequal X inactivation and of females manifesting X-linked recessive disorders.
- Published
- 1993
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41. Molecular and cellular heterogeneity of Wilms' tumor.
- Author
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Velasco S, D'Amico D, Schneider NR, Timmons C, Chappell E, Lee D, and Nisen PD
- Subjects
- Cell Separation, Chromosome Aberrations pathology, Chromosome Disorders, DNA, Neoplasm genetics, DNA-Binding Proteins genetics, Gene Amplification, Gene Rearrangement, Genes, Tumor Suppressor, Genes, myc, Heterozygote, Humans, Immunohistochemistry, Polymorphism, Restriction Fragment Length, Restriction Mapping, Tumor Suppressor Protein p53 genetics, WT1 Proteins, Wilms Tumor genetics, Wilms Tumor pathology
- Abstract
We developed a Wilms' tumor-cell culture system to investigate the molecular basis of nephrogenesis and oncogenesis. Several distinct fractions of cells were isolated and characterized from the same tumor specimen. The cells exhibited striking differences in morphology, immunocytochemical staining profiles and cytogenetics. One fraction contained cells with features of epithelium; other cell fractions resembled partially differentiated mesenchyme (blastema or stroma). While the Wilms' tumor-suppressor gene WT1 was not altered, loss of heterozygosity (LOH) and an insertion in intron I of the p53 tumor-suppressor gene occurred in the tumor and the cultured cell types. LOH for RB was detected only in the cultured cells. These findings are consistent with a model of tumor initiation in a pluripotent cell that is able to undergo subsequent differentiation along multiple different lines and which mimics normal nephrogenesis.
- Published
- 1993
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42. Secondary acute myeloid leukemia in children with acute lymphoblastic leukemia treated with etoposide.
- Author
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Winick NJ, McKenna RW, Shuster JJ, Schneider NR, Borowitz MJ, Bowman WP, Jacaruso D, Kamen BA, and Buchanan GR
- Subjects
- Acute Disease, Adolescent, Bone Marrow pathology, Burkitt Lymphoma pathology, Child, Child, Preschool, Etoposide therapeutic use, Female, Humans, Infant, Leukemia, Myeloid pathology, Male, Precursor Cell Lymphoblastic Leukemia-Lymphoma pathology, Recurrence, Risk, Treatment Outcome, Burkitt Lymphoma drug therapy, Etoposide adverse effects, Leukemia, Myeloid chemically induced, Neoplasms, Second Primary chemically induced, Precursor Cell Lymphoblastic Leukemia-Lymphoma drug therapy
- Abstract
Purpose: To describe the occurrence of secondary acute myeloid leukemia (AML) in children with acute lymphoblastic leukemia (ALL) treated with etoposide (VP-16)., Patients and Methods: Two hundred five consecutive children with early B-lineage ALL were treated according to the Dallas/Fort Worth (DFW) protocol between January 1986 and July 1, 1991. Therapy included a four-drug induction followed by consolidation and continuation phases of nightly oral mercaptopurine (6-MP) and repetitive courses of divided-dose oral methotrexate (dMTX) and asparaginase (L-asp). Three doses of VP-16 and cytarabine (Ara-C) were given during consolidation and later, during continuation, two doses were given 3 to 4 days apart, every 9 weeks. Intrathecal (IT) chemotherapy was given throughout the treatment period., Results: Two hundred three of the 205 patients entered remission. Only eight of these 203 children have had a bone marrow relapse (ALL). However, 10 other children have developed secondary AML 23 to 68 months following the diagnosis of ALL. Overall event-free survival (EFS) at 4 years is 79.3% +/- 5.1%, with a risk of secondary AML at 4 years of 5.9% +/- 3.2%., Conclusion: This experience provides strong evidence for a link between epipodophyllotoxin therapy and secondary AML since none of these children received alkylating agent therapy or irradiation. This serious complication raises concern as to the appropriate use of epipodophyllotoxins in the treatment of childhood ALL.
- Published
- 1993
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43. Aldrin intoxication and clearance of associated dieldrin residues in a group of feedlot cattle.
- Author
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Casteel SW, Satalowich FT, Kendall JD, Rottinghaus GE, Gosser HS, and Schneider NR
- Subjects
- Adipose Tissue chemistry, Adipose Tissue metabolism, Aldrin pharmacokinetics, Animal Feed poisoning, Animals, Cattle, Chromatography, Gas, Dieldrin analysis, Drug Residues analysis, Female, Food Contamination, Gas Chromatography-Mass Spectrometry, Half-Life, Male, Poisoning veterinary, Aldrin poisoning, Cattle Diseases chemically induced, Dieldrin metabolism, Drug Residues pharmacokinetics
- Abstract
A sudden onset of bizarre neurologic dysfunction was found in 8 of 90 mixed-breed feeder calves. Seven other calves were dead, and 3 more died during the next week. A diagnosis of organochlorine toxicosis was made when rumen and abomasal contents from 1 of the calves revealed 22.4 and 20.6 micrograms of aldrin/g of ingesta, respectively. Complete feeds retrieved from self-feeders contained 54 and 528 micrograms of aldrin/g of feed. The initial concentration range in fat from 40 live calves was 6.01 to 42.44 micrograms of dieldrin/g of fat. Additional fat samples were analyzed to verify residue compliance until the entire herd was clear of residue 18 months after removal of the contaminated ration. The range of apparent half-lives for dieldrin in body fat of heifers and steers was 69 to 231 and 53 to 116 days, respectively. These findings demonstrate the considerable variability in apparent half-life of dieldrin in field cases. In cases of dieldrin-contaminated livestock, veterinarians and regulatory personnel must accurately determine the necessary slaughter withholding times so that informed economic decisions are made in the best interest of the producer while enhancing the probability of a safe food supply. Excretion rates of dieldrin from field-contaminated cattle may not be consistent with results obtained under experimental conditions.
- Published
- 1993
44. Acute nonlymphocytic leukemia after treatment of systemic lupus erythematosus with immunosuppressive agents.
- Author
-
Vasquez S, Kavanaugh AF, Schneider NR, Wacholtz MC, and Lipsky PE
- Subjects
- Adult, Azathioprine administration & dosage, Azathioprine adverse effects, Azathioprine therapeutic use, Chromosomes, Human, Pair 16, Cyclophosphamide administration & dosage, Cyclophosphamide adverse effects, Cyclophosphamide therapeutic use, Female, Humans, Immunosuppressive Agents administration & dosage, Injections, Intravenous, Leukemia, Myeloid, Acute genetics, Immunosuppressive Agents adverse effects, Immunosuppressive Agents therapeutic use, Leukemia, Myeloid, Acute chemically induced, Lupus Erythematosus, Systemic drug therapy
- Abstract
We describe a case of acute nonlymphocytic leukemia with inversion of chromosome 16 in a patient with systemic lupus erythematosus treated with immunosuppressive agents including azathioprine and cyclophosphamide. Although the leukemia may have been caused by other factors, it is worth noting the potential association of this malignancy with immunosuppressive therapy.
- Published
- 1992
45. Ultrastructural, immunocytochemical, and cytogenetic characterization of a large congenital fibrosarcoma.
- Author
-
Argyle JC, Tomlinson GE, Stewart D, and Schneider NR
- Subjects
- Calcium blood, Fibrosarcoma chemistry, Fibrosarcoma genetics, Fibrosarcoma ultrastructure, Humans, Immunoenzyme Techniques, Infant, Newborn, Karyotyping, Male, Microscopy, Electron, Soft Tissue Neoplasms chemistry, Soft Tissue Neoplasms genetics, Soft Tissue Neoplasms ultrastructure, Fibrosarcoma congenital, Soft Tissue Neoplasms congenital
- Abstract
Cytogenetic, immunocytochemical, and ultrastructural studies were performed on a large congenital fibrosarcoma. To our knowledge, this is the first report of a congenital fibrosarcoma characterized by all of these techniques. The findings of immunochemical and electron microscopic studies supported the suggestion that the tumor is of fibroblastic origin. The karyotype of the tumor (48,XY,+11,+20) is similar to that observed in previously reported cases and substantiates the hypothesis that congenital fibrosarcoma is characterized by nonrandom gain of chromosomes.
- Published
- 1992
46. Childhood acute lymphoblastic leukemia with both t(1;19) and t(9;22).
- Author
-
Griffin TC, Tomlinson GE, Raimondi SC, Sandoval C, Timmons CF, Rosenfield C, Carroll AJ, and Schneider NR
- Subjects
- Adolescent, Child, Child, Preschool, Chromosomes, Human, Pair 11, Combined Modality Therapy, Female, Humans, Karyotyping, Leukemia, Myelogenous, Chronic, BCR-ABL Positive genetics, Leukemia, Myelogenous, Chronic, BCR-ABL Positive therapy, Leukemia, Myeloid genetics, Male, Neoplasms, Second Primary genetics, Philadelphia Chromosome, Precursor B-Cell Lymphoblastic Leukemia-Lymphoma genetics, Precursor B-Cell Lymphoblastic Leukemia-Lymphoma therapy, Precursor Cell Lymphoblastic Leukemia-Lymphoma therapy, Chromosomes, Human, Pair 1, Chromosomes, Human, Pair 19, Chromosomes, Human, Pair 22, Chromosomes, Human, Pair 9, Precursor Cell Lymphoblastic Leukemia-Lymphoma genetics, Translocation, Genetic
- Abstract
The chromosomal rearrangements t(1;19)(q23;p13.3) and t(9;22) (q34;q11.2) are independent abnormalities commonly observed in the blast cells of children with acute lymphoblastic leukemia (ALL). We report three children whose leukemic cells contained both translocations at diagnosis. The patients, two males aged 3 and 8 years and a female aged 14 years, all presented with central nervous system involvement. One patient exhibited a pre-B leukemic phenotype (cytoplasmic immunoglobulin, cIg, positive), while two had an early pre-B phenotype (cIg negative). All three patients received radiotherapy and multiagent chemotherapy which included an epipodophyllotoxin in two patients. Two patients suffered relapses of ALL, in both cases with disappearance of t(1;19)-containing clones but persistence of t(9;22). The two patients who received an epipodophyllotoxin as part of their chemotherapeutic regimen both developed secondary myeloid leukemia with entirely new cytogenetic findings, including abnormalities of chromosome band 11q23. These patients are the first to be described with this unusual combination of cytogenetic abnormalities.
- Published
- 1992
47. Cytogenetics of a renal cell carcinoma in a 17-month-old child. Evidence for Xp11.2 as a recurring breakpoint.
- Author
-
Tomlinson GE, Nisen PD, Timmons CF, and Schneider NR
- Subjects
- Carcinoma, Renal Cell pathology, Chromosome Disorders, Humans, Infant, Kidney Neoplasms genetics, Male, Polymorphism, Restriction Fragment Length, Translocation, Genetic, X Chromosome, Carcinoma, Renal Cell genetics, Chromosome Aberrations pathology, Kidney Neoplasms pathology
- Abstract
A renal cell carcinoma from a 17-month-old boy with a history of maternal hydrocarbon exposure was found to have a 46,Y,t(X;17)(p11.2;q25) karyotype. Although this translocation has not previously been reported, other translocations involving Xp11.2 have been described, suggesting that this may represent a non-random breakpoint involved in the pathogenesis of childhood renal cell carcinoma. Both chromosomes 3 in the tumor were normal by both karyotype and RFLP analysis.
- Published
- 1991
- Full Text
- View/download PDF
48. Secondary myelodysplastic syndrome complicating therapy for osteogenic sarcoma.
- Author
-
Pappo A, Schneider NR, Sanders JM, and Buchanan GR
- Subjects
- Antineoplastic Combined Chemotherapy Protocols therapeutic use, Bleomycin administration & dosage, Child, Cisplatin administration & dosage, Cyclophosphamide administration & dosage, Dactinomycin administration & dosage, Doxorubicin administration & dosage, Female, Humans, Methotrexate administration & dosage, Antineoplastic Combined Chemotherapy Protocols adverse effects, Myelodysplastic Syndromes chemically induced, Osteosarcoma drug therapy
- Abstract
A 12-year-old girl with nonmetastatic osteogenic sarcoma received treatment with doxorubicin, methotrexate, cisplatin, cyclophosphamide, bleomycin, and dactinomycin. She developed unexplained persistent pancytopenia after completion of chemotherapy. Twenty-three months after the initial diagnosis of osteosarcoma an evaluation revealed a bone marrow pattern consistent with the diagnosis of refractory anemia with excess blasts, and karyotype analysis showed characteristic findings of therapy-related myelodysplasia (loss of chromosomes 5 and 7, as well as 12p and 17p deletions). Bone marrow transplantation from an human leukocyte antigen (HLA)-compatible sibling donor was performed 26 months after the diagnosis of the primary malignancy. Although it is unproven that the alkylating agents administered to this patient were responsible for the myelodysplastic syndrome, careful follow-up of osteosarcoma patients who receive alkylating agents is warranted.
- Published
- 1991
- Full Text
- View/download PDF
49. Gastrointestinal malformation in genetic disorders: a case of partial trisomy 2q with short esophagus and tubular stomach.
- Author
-
Porter J, Klein VR, Wilson GN, and Schneider NR
- Subjects
- Chromosome Aberrations diagnosis, Chromosome Aberrations pathology, Chromosome Disorders, Congenital Abnormalities epidemiology, Genes, Dominant, Genes, Recessive, Genetic Linkage, Humans, Infant, Newborn, Karyotyping, Radiography, Chromosome Aberrations genetics, Chromosomes, Human, Pair 2, Congenital Abnormalities diagnostic imaging, Esophagus abnormalities, Stomach abnormalities, Trisomy
- Published
- 1991
- Full Text
- View/download PDF
50. In vivo mercury and methyl mercury levels in patients at different intervals after amalgam restorations.
- Author
-
Fung YK, Molvar MP, Strom A, Schneider NR, and Carlson MP
- Subjects
- Humans, Mastication, Dental Amalgam adverse effects, Mercury analysis, Methylmercury Compounds analysis
- Published
- 1991
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