108 results on '"Sela H"'
Search Results
2. Abnormal shape of the cavum septi pellucidi: an indirect sign of partial agenesis of the corpus callosum
- Author
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Shen, O., Gelot, A. B., Moutard, M. L., Jouannic, J. M., Sela, H. Y., and Garel, C.
- Published
- 2015
- Full Text
- View/download PDF
3. Trace Element Concentration in Hair Samples as an Indicator of Exposure of Population in the Negev, Israel
- Author
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Sela, H., Karpas, Z., Cohen, H., Tal, A., and Zeiri, Y.
- Published
- 2013
- Full Text
- View/download PDF
4. Biomonitoring of hair samples by laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS)
- Author
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Sela, H., Karpas, Z., Zoriy, M., Pickhardt, C., and Becker, J.S.
- Published
- 2007
- Full Text
- View/download PDF
5. Intraoperative sonographic detection of ureteral jet during uncomplicated Cesarean delivery is feasible and safe
- Author
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Shen, O., primary, Mazaki, E., additional, Ioscovich, A., additional, Sela, H. Y., additional, Samueloff, A., additional, and Reichman, O., additional
- Published
- 2020
- Full Text
- View/download PDF
6. Randomized controlled trial of external cephalic version in term multiparae with or without spinal analgesia†
- Author
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Weiniger, C. F., Ginosar, Y., Elchalal, U., Sela, H. Y., Weissman, C., and Ezra, Y.
- Published
- 2010
- Full Text
- View/download PDF
7. Diversity of virulence phenotypes among annual populations of Puccinia triticina originating from common wheat in Israel during the period 2000–15
- Author
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Kosman, E., primary, Ben‐Yehuda, P., additional, Manisterski, J., additional, and Sela, H., additional
- Published
- 2019
- Full Text
- View/download PDF
8. Wheat domestication in light of haplotype analyses of the Brittle rachis 1 genes (BTR1-A and BTR1-B)
- Author
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Nave, M, Avni, R, Cakir, E, Portnoy, V, Sela, H, Pourkheirandish, M, Ozkan, H, Hale, I, Komatsuda, T, Dvorak, J, Distelfeld, A, Nave, M, Avni, R, Cakir, E, Portnoy, V, Sela, H, Pourkheirandish, M, Ozkan, H, Hale, I, Komatsuda, T, Dvorak, J, and Distelfeld, A
- Abstract
Wheat domestication was a milestone in the rise of agrarian societies in the Fertile Crescent. As opposed to the freely dispersing seeds of its tetraploid progenitor wild emmer, the hallmark trait of domesticated wheat is intact, harvestable spikes. During domestication, wheat acquired recessive loss-of-function mutations in the Brittle Rachis 1 genes, both in the A genome (BTR1-A) and B genome (BTR1-B). In this study, we probe the geographical provenances of these mutations via haplotype analyses of a collection of wild and domesticated accessions. Our results show that the precursor of the domesticated haplotype of BTR1-A was detected in 32% of the wild accessions gathered throughout the Levant, from central Israel to central Turkey. In contrast, the precursor of the domesticated haplotype of BTR1-B, which carries a distinct 11 bp deletion in the promoter region, was found in only 10% of the tested wild accessions, all from the Southern Levant. Moreover, we identified of a single wild emmer accession in Southern Levant that carries the progenitor haplotypes for both BTR1-A and BTR1-B genes. These observations suggest that at least part of the emmer domestication process occurred in Southern Levant, contrary to the widely held view that the northern part of the Fertile Crescent was the center of wheat domestication.
- Published
- 2019
9. EP18.02: The association between elastogram of the cervix and preterm delivery among parturients at risk for preterm delivery: a prospective study
- Author
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Boldes, R., primary, Reichman, O., additional, Sela, H., additional, and Lafi, F., additional
- Published
- 2017
- Full Text
- View/download PDF
10. Wild emmer genome architecture and diversity elucidate wheat evolution and domestication
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Avni, R, Nave, M, Barad, O, Baruch, K, Twardziok, SO, Gundlach, H, Hale, I, Mascher, M, Spannagl, M, Wiebe, K, Jordan, KW, Golan, G, Deek, J, Ben-Zvi, B, Ben-Zvi, G, Himmelbach, A, MacLachlan, RP, Sharpe, AG, Fritz, A, Ben-David, R, Budak, H, Fahima, T, Korol, A, Faris, JD, Hernandez, A, Mikel, MA, Levy, AA, Steffenson, B, Maccaferri, M, Tuberosa, R, Cattivelli, L, Faccioli, P, Ceriotti, A, Kashkush, K, Pourkheirandish, M, Komatsuda, T, Eilam, T, Sela, H, Sharon, A, Ohad, N, Chamovitz, DA, Mayer, KFX, Stein, N, Ronen, G, Peleg, Z, Pozniak, CJ, Akhunov, ED, Distelfeld, A, Avni, R, Nave, M, Barad, O, Baruch, K, Twardziok, SO, Gundlach, H, Hale, I, Mascher, M, Spannagl, M, Wiebe, K, Jordan, KW, Golan, G, Deek, J, Ben-Zvi, B, Ben-Zvi, G, Himmelbach, A, MacLachlan, RP, Sharpe, AG, Fritz, A, Ben-David, R, Budak, H, Fahima, T, Korol, A, Faris, JD, Hernandez, A, Mikel, MA, Levy, AA, Steffenson, B, Maccaferri, M, Tuberosa, R, Cattivelli, L, Faccioli, P, Ceriotti, A, Kashkush, K, Pourkheirandish, M, Komatsuda, T, Eilam, T, Sela, H, Sharon, A, Ohad, N, Chamovitz, DA, Mayer, KFX, Stein, N, Ronen, G, Peleg, Z, Pozniak, CJ, Akhunov, ED, and Distelfeld, A
- Abstract
Wheat (Triticum spp.) is one of the founder crops that likely drove the Neolithic transition to sedentary agrarian societies in the Fertile Crescent more than 10,000 years ago. Identifying genetic modifications underlying wheat's domestication requires knowledge about the genome of its allo-tetraploid progenitor, wild emmer (T. turgidum ssp. dicoccoides). We report a 10.1-gigabase assembly of the 14 chromosomes of wild tetraploid wheat, as well as analyses of gene content, genome architecture, and genetic diversity. With this fully assembled polyploid wheat genome, we identified the causal mutations in Brittle Rachis 1 (TtBtr1) genes controlling shattering, a key domestication trait. A study of genomic diversity among wild and domesticated accessions revealed genomic regions bearing the signature of selection under domestication. This reference assembly will serve as a resource for accelerating the genome-assisted improvement of modern wheat varieties.
- Published
- 2017
11. Ancient diversity of splicing motifs and protein surfaces in the wild emmer wheat (Triticum dicoccoides) LR10 coiled coil (CC) and leucine-rich repeat (LRR) domains
- Author
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Sela, H, Spiridon, L N, Petrescu, A J, Akerman, M, Mandel-Gutfreund, Y, Nevo, E, Loutre, C, Keller, B, Schulman, A H, Fahima, T, University of Zurich, and Fahima, T
- Subjects
10126 Department of Plant and Microbial Biology ,1110 Plant Science ,1312 Molecular Biology ,1102 Agronomy and Crop Science ,580 Plants (Botany) ,1111 Soil Science - Published
- 2012
- Full Text
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12. Rapid linkage disequilibrium decay in the Lr10 gene in wild emmer wheat (Triticum dicoccoides) populations
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Sela, H, Loutre, C, Keller, B, Nevo, E, Korol, A, Fahima, T, University of Zurich, and Fahima, T
- Subjects
10126 Department of Plant and Microbial Biology ,1311 Genetics ,1305 Biotechnology ,1102 Agronomy and Crop Science ,580 Plants (Botany) - Published
- 2011
- Full Text
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13. Isolation, cohesion and contingent network effects: the case of school attachment and engagement
- Author
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G. Robin Gauthier, Jeffrey A. Smith, Sela Harcey, and Kelly Markowski
- Subjects
Adolescence ,Social networks ,Cohesion ,Isolation ,Attachment ,Engagement ,Mathematics ,QA1-939 ,Social Sciences - Published
- 2022
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14. Population-genetic analysis of HvABCG31 promoter sequence in wild barley (Hordeum vulgare ssp spontaneum)
- Author
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Ma, X, Sela, H, Jiao, G, Li, C, Wang, A, Pourkheirandish, M, Weiner, D, Sakuma, S, Krugman, T, Nevo, E, Komatsuda, T, Korol, A, Chen, G, Ma, X, Sela, H, Jiao, G, Li, C, Wang, A, Pourkheirandish, M, Weiner, D, Sakuma, S, Krugman, T, Nevo, E, Komatsuda, T, Korol, A, and Chen, G
- Abstract
BACKGROUND: The cuticle is an important adaptive structure whose origin played a crucial role in the transition of plants from aqueous to terrestrial conditions. HvABCG31/Eibi1 is an ABCG transporter gene, involved in cuticle formation that was recently identified in wild barley (Hordeum vulgare ssp. spontaneum). To study the genetic variation of HvABCG31 in different habitats, its 2 kb promoter region was sequenced from 112 wild barley accessions collected from five natural populations from southern and northern Israel. The sites included three mesic and two xeric habitats, and differed in annual rainfall, soil type, and soil water capacity. RESULTS: Phylogenetic analysis of the aligned HvABCG31 promoter sequences clustered the majority of accessions (69 out of 71) from the three northern mesic populations into one cluster, while all 21 accessions from the Dead Sea area, a xeric southern population, and two isolated accessions (one from a xeric population at Mitzpe Ramon and one from the xeric 'African Slope' of "Evolution Canyon") formed the second cluster. The southern arid populations included six haplotypes, but they differed from the consensus sequence at a large number of positions, while the northern mesic populations included 15 haplotypes that were, on average, more similar to the consensus sequence. Most of the haplotypes (20 of 22) were unique to a population. Interestingly, higher genetic variation occurred within populations (54.2%) than among populations (45.8%). Analysis of the promoter region detected a large number of transcription factor binding sites: 121-128 and 121-134 sites in the two southern arid populations, and 123-128,125-128, and 123-125 sites in the three northern mesic populations. Three types of TFBSs were significantly enriched: those related to GA (gibberellin), Dof (DNA binding with one finger), and light. CONCLUSIONS: Drought stress and adaptive natural selection may have been important determinants in the observed sequence variat
- Published
- 2012
15. OP05.08: Abnormal placental cord insertion in monochorionic-diamniotic twins: an ominous finding
- Author
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Simpson, L., primary, Fuchs, K., additional, Vink, J., additional, Montero, F. J., additional, Sela, H., additional, Miller, R. S., additional, and D'Alton, M., additional
- Published
- 2011
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16. MEASUREMENT OF THE 234U/238U RATIO BY MC-ICPMS IN DRINKING WATER, HAIR, NAILS, AND URINE AS AN INDICATOR OF URANIUM EXPOSURE SOURCE
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Karpas, Z, primary, Lorber, A, additional, Sela, H, additional, Paz-Tal, O, additional, Hagag, Y, additional, Kurttio, P, additional, and Salonen, L, additional
- Published
- 2005
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17. Determination of 234U/238U ratio: comparison of multi-collector ICPMS and ICP-QMS for water, hair and nails samples, and comparison with alpha-spectrometry for water samples
- Author
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Karpas, Z., primary, Lorber, A., additional, Sela, H., additional, Paz-Tal, O., additional, Hagag, Y., additional, Kurttio, P., additional, and Salonen, L., additional
- Published
- 2005
- Full Text
- View/download PDF
18. OC139: Rudimentary horn pregnancy: early sonographic diagnosis confirmed by Magnetic Resonance Imaging
- Author
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Tsafrir, A., primary, Rojansky, N., additional, Sela, H. Y., additional, Gomori, M., additional, and Nadjari, M., additional
- Published
- 2003
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19. Soldiers to Scientists: Military Service, Gender, and STEM Degree Earning
- Author
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Christina Steidl, Regina Werum, Sela Harcey, Jacob Absalon, and Alice MillerMacPhee
- Subjects
Social Sciences ,Sociology (General) ,HM401-1281 - Abstract
The authors use 2014–2018 data from the American Community Survey to answer two questions: To what extent is military service associated with higher rates of earning a bachelor’s degree in a science, technology, engineering, and mathematics (STEM) field (vs. a non-STEM field)? To what extent is this relationship gendered? The findings suggest that military service is associated with higher odds of completing a STEM degree and that this association is particularly strong for female veterans. Comparison across multiple STEM definitions suggests that military service does not simply channel women into traditionally female-dominated STEM fields. Instead, the findings show the biggest boost for women earning degrees in traditionally male-dominated STEM fields. The authors situate these findings in light of extant empirical and theoretical research on gender gaps in STEM and discuss implications for policy and research.
- Published
- 2020
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20. DETERMINATION OF 234U/238U RATIO: COMPARISON OF MULTI-COLLECTOR ICPMS AND ICP-QMS FOR WATER, HAIR AND NAILS SAMPLES, AND COMPARISON WITH ALPHA-SPECTROMETRY FOR WATER SAMPLES.
- Author
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Karpas, Z., Lorber, A., Sela, H., Paz-Tal, O., Hagag, Y., Kurttio, P., and Salonen, L.
- Subjects
INDUCTIVELY coupled plasma mass spectrometry ,URANIUM isotopes ,WATER ,HAIR ,NAILS (Anatomy) ,DILUTION ,MINERALS ,HUMAN beings - Abstract
The
234 U/238 U ratio in water, hair and nails samples was determined by multi-collector inductively coupled plasma mass spectrometry (MC-ICPMS) and inductively coupled plasma quadrupole mass spectrometry (ICP-QMS) and by alpha-spectrometry for the water samples only. A correlation of 0.99 was found between the two ICPMS methods and of 0.98 with alpha-spectrometry. The range of activity ratios was between 0.9 and 2.6 according to the MC-ICPMS measurements. The reproducibility of both ICPMS techniques was better than 4% for water samples containing 1 µg l-1 of uranium and a U/234 238 U atom ratio of 54.9 × 10-6 . Sample preparation for the ICPMS consisted of dilution of water samples containing >10 µg l-1 of uranium and measurement time was ~1 mm, while alpha-spectrometry involved pre-concentration and separation of the uranium and counting times of 1000 mm. [ABSTRACT FROM AUTHOR]- Published
- 2006
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21. MEASUREMENT OF THE 234U/238U RATIO BY MC-ICPMS IN DRINKING WATER, HAIR, NAILS, AND URINE AS AN INDICATOR OF URANIUM EXPOSURE SOURCE.
- Author
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Karpas, Z., Lorber, A., Sela, H., Paz-Tal, O., Hagag, Y., Kurttio, P., and Salonen, L.
- Subjects
CONTAMINATION of drinking water ,URANIUM ,BIOLOGICAL assay ,WATER analysis ,INDUCTIVELY coupled plasma mass spectrometry ,STATISTICAL correlation - Abstract
The isotopic ratio
234 U/238 U in drinking water and in hair, toenail, and urine samples from 45 individuals who consumed 0.2-2775 μg d-1 of uranium in their drinking water was determined using a multi-collector inductively coupled plasma mass spectrometer (MC-ICPMS). The234 U/238 U atom ratio in the water samples varied from 51 × 10-6 to 252 × 10-6 whereas in secular equilibrium (i.e., unity activity ratio) the ratio is 54.9 × 10-6 . The correlation of the234 U/238 U ratio between hair and nail samples was 0.98, and between hair and nails and urine the ratio was 0.91 and 0.89, respectively. The correlation of the ratio between water and the hair or nails was 0.97 but only 0.72 for water and urine, possibly due to spectral interferences. These results conclusively demonstrated that the uranium found in the bioassays can be traced to the drinking water, thus providing a direct link to the source of exposure. Hair may serve as an excellent indicator of occupational or environmental exposure to uranium and provide information regarding its source. Bioassay of hair is attractive as it is an effective bio-concentrator, samples can be easily stored, the concentration reflects an integrated value, and, finally, the measurement of the234 U/238 U isotopic ratio in digested hair samples by MC-ICPMS is feasible and highly informative. Hair bioassay can also be used to assess exposure to depleted uranium long after the subjects have left the area suspected of contamination. [ABSTRACT FROM AUTHOR]- Published
- 2005
- Full Text
- View/download PDF
22. High prevalence of personality disorders among circadian rhythm sleep disorders (CRSD) patients
- Author
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Dagan, Y., Sela, H., Omer, H., Hallis, D., and Dar, R.
- Published
- 1996
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23. Stability and change in personal fertility ideals among U.S. women in heterosexual relationships
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Colleen Ray, Sela Harcey, Arthur Greil, Stacy Tiemeyer, and Julia McQuillan
- Subjects
fertility desires ,fertility intentions ,United States ,Demography. Population. Vital events ,HB848-3697 - Abstract
Background: Demographers typically ask about societal, not personal, fertility ideals. Societal ideals are probably more stable than personal ideals. Assessing whether personal fertility ideals are as stable as societal ideals could inform models of population fertility change and models of well-being associated with fertility outcomes. Methods: We use the two-wave National Survey of Fertility Barriers (NSFB) to model stability and change in fertility ideals among 879 women in heterosexual couples that persisted for both waves. Results: Personal fertility ideals are stable for most (69Š) women, but roughly one-third adjust their ideal number between waves. Of the women who changed their personal fertility ideal, approximately half increase and half decrease their personal fertility ideal over time. Multinomial logistic regression indicates that women with a higher fertility ideal at Wave 1 had higher odds of increasing and lower odds of decreasing their fertility ideal by Wave 2. Higher education was associated with lower likelihood of increasing fertility ideals. In addition, full-time employment at the initial interview was associated with higher likelihood of decreasing fertility ideals. Conclusions: Individual characteristics, attitudes, life course, and social cues are associated with changes in personal fertility ideals. More characteristics were associated with decreases than increases in personal fertility ideals. Contribution: By demonstrating that many women change personal fertility ideals over three years, the current study advances understanding of variations in fertility experiences. Importantly, these findings can also inform policies and interventions designed to support child and maternal health.
- Published
- 2018
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- View/download PDF
24. Impact of Surgeon Annual Volume on Short-term Maternal Outcome in Cesarean Delivery.
- Author
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Drukker, L., Hants, Y., Farkash, R., Grisaru-Granovsky, S., Shen, O., Samueloff, A., and Sela, H. Y.
- Published
- 2017
- Full Text
- View/download PDF
25. Population-genetic analysis of HvABCG31 promoter sequence in wild barley (Hordeum vulgare ssp. spontaneum)
- Author
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Ma Xiaoying, Sela Hanan, Jiao Genlin, Li Chao, Wang Aidong, Pourkheirandish Mohammad, Weiner Dmitry, Sakuma Shun, Krugman Tamar, Nevo Eviatar, Komatsuda Takao, Korol Abraham, and Chen Guoxiong
- Subjects
Wild barley ,HvABCG31 ,Promoter ,Phylogenetic ,TFBSs ,Evolution ,QH359-425 - Abstract
Abstract Background The cuticle is an important adaptive structure whose origin played a crucial role in the transition of plants from aqueous to terrestrial conditions. HvABCG31/Eibi1 is an ABCG transporter gene, involved in cuticle formation that was recently identified in wild barley (Hordeum vulgare ssp. spontaneum). To study the genetic variation of HvABCG31 in different habitats, its 2 kb promoter region was sequenced from 112 wild barley accessions collected from five natural populations from southern and northern Israel. The sites included three mesic and two xeric habitats, and differed in annual rainfall, soil type, and soil water capacity. Results Phylogenetic analysis of the aligned HvABCG31 promoter sequences clustered the majority of accessions (69 out of 71) from the three northern mesic populations into one cluster, while all 21 accessions from the Dead Sea area, a xeric southern population, and two isolated accessions (one from a xeric population at Mitzpe Ramon and one from the xeric ‘African Slope’ of “Evolution Canyon”) formed the second cluster. The southern arid populations included six haplotypes, but they differed from the consensus sequence at a large number of positions, while the northern mesic populations included 15 haplotypes that were, on average, more similar to the consensus sequence. Most of the haplotypes (20 of 22) were unique to a population. Interestingly, higher genetic variation occurred within populations (54.2%) than among populations (45.8%). Analysis of the promoter region detected a large number of transcription factor binding sites: 121–128 and 121–134 sites in the two southern arid populations, and 123–128,125–128, and 123–125 sites in the three northern mesic populations. Three types of TFBSs were significantly enriched: those related to GA (gibberellin), Dof (DNA binding with one finger), and light. Conclusions Drought stress and adaptive natural selection may have been important determinants in the observed sequence variation of HvABCG31 promoter. Abiotic stresses may be involved in the HvABCG31 gene transcription regulations, generating more protective cuticles in plants under stresses.
- Published
- 2012
- Full Text
- View/download PDF
26. Tandem kinase proteins across the plant kingdom.
- Author
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Reveguk T, Fatiukha A, Potapenko E, Reveguk I, Sela H, Klymiuk V, Li Y, Pozniak C, Wicker T, Coaker G, and Fahima T
- Abstract
Plant pathogens pose a continuous threat to global food production. Recent discoveries in plant immunity research unveiled a unique protein family characterized by an unusual resistance protein structure that combines two kinase domains. This study demonstrates the widespread occurrence of tandem kinase proteins (TKPs) across the plant kingdom. An examination of 104 plant species' genomes uncovered 2,682 TKPs. The majority (95.6%) of these kinase domains are part of the receptor-like kinase-Pelle family, which is crucial for cell surface responses in plant immunity. Notably, 90% of TKPs comprise dual kinase domains, with over 50% being pseudokinases. Over 56% of these proteins harbor 127 different integrated domains, and over 47% include a transmembrane domain. TKP pseudokinases and/or integrated domains probably serve as decoys, engaging with pathogen effectors to trigger plant immunity. The TKP Atlas we created sheds light on the mechanisms of TKP convergent molecular evolution and potential function., Competing Interests: Competing interests: The authors declare no competing interests., (© 2025. The Author(s), under exclusive licence to Springer Nature America, Inc.)
- Published
- 2025
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- View/download PDF
27. A single NLR gene confers resistance to leaf and stripe rust in wheat.
- Author
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Sharma D, Avni R, Gutierrez-Gonzalez J, Kumar R, Sela H, Prusty MR, Shatil-Cohen A, Molnár I, Holušová K, Said M, Doležel J, Millet E, Khazan-Kost S, Landau U, Bethke G, Sharon O, Ezrati S, Ronen M, Maatuk O, Eilam T, Manisterski J, Ben-Yehuda P, Anikster Y, Matny O, Steffenson BJ, Mascher M, Brabham HJ, Moscou MJ, Liang Y, Yu G, Wulff BBH, Muehlbauer G, Minz-Dub A, and Sharon A
- Subjects
- Aegilops genetics, Aegilops microbiology, Plants, Genetically Modified genetics, Genes, Plant, Alleles, Triticum genetics, Triticum microbiology, Triticum immunology, Plant Diseases microbiology, Plant Diseases genetics, Plant Diseases immunology, Disease Resistance genetics, Puccinia pathogenicity, Basidiomycota pathogenicity, Basidiomycota physiology, NLR Proteins genetics, Phylogeny, Plant Proteins genetics, Plant Proteins metabolism, Plant Leaves microbiology, Plant Leaves genetics
- Abstract
Nucleotide-binding leucine-rich repeat (NLR) disease resistance genes typically confer resistance against races of a single pathogen. Here, we report that Yr87/Lr85, an NLR gene from Aegilops sharonensis and Aegilops longissima, confers resistance against both P. striiformis tritici (Pst) and Puccinia triticina (Pt) that cause stripe and leaf rust, respectively. Yr87/Lr85 confers resistance against Pst and Pt in wheat introgression as well as transgenic lines. Comparative analysis of Yr87/Lr85 and the cloned Triticeae NLR disease resistance genes shows that Yr87/Lr85 contains two distinct LRR domains and that the gene is only found in Ae. sharonensis and Ae. longissima. Allele mining and phylogenetic analysis indicate multiple events of Yr87/Lr85 gene flow between the two species and presence/absence variation explaining the majority of resistance to wheat leaf rust in both species. The confinement of Yr87/Lr85 to Ae. sharonensis and Ae. longissima and the resistance in wheat against Pst and Pt highlight the potential of these species as valuable sources of disease resistance genes for wheat improvement., Competing Interests: Competing interests The authors declare the following competing interests: D.S., R.A., R.K, E.M., A.M-D., and A.S. are inventors on the US patent application 63/250,413 filed by Ramot (Tel Aviv University) and relating to the use of Yr87/Lr85 for leaf and stripe rust resistance in transgenic wheat. All other authors claim no competing interests., (© 2024. The Author(s).)
- Published
- 2024
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28. 36-year study reveals stability of a wild wheat population across microhabitats.
- Author
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Dahan-Meir T, Ellis TJ, Mafessoni F, Sela H, Rudich O, Manisterski J, Avivi-Ragolsky N, Raz A, Feldman M, Anikster Y, Nordborg M, and Levy AA
- Subjects
- Phenotype, Microsatellite Repeats genetics, Models, Genetic, Genetic Variation, Triticum genetics, Genetics, Population, Genotype, Ecosystem
- Abstract
Long-term genetic studies of wild populations are very scarce, but are essential for connecting ecological and population genetics models, and for understanding the dynamics of biodiversity. We present a study of a wild wheat population sampled over a 36-year period at high spatial resolution. We genotyped 832 individuals from regular sampling along transects during the course of the experiment. Genotypes were clustered into ecological microhabitats over scales of tens of metres, and this clustering was remarkably stable over the 36 generations of the study. Simulations show that it is difficult to determine whether this spatial and temporal stability reflects extremely limited dispersal or fine-scale local adaptation to ecological parameters. Using a common-garden experiment, we showed that the genotypes found in distinct microhabitats differ phenotypically. Our results provide a rare insight into the population genetics of a natural population over a long monitoring period., (© 2024 The Author(s). Molecular Ecology published by John Wiley & Sons Ltd.)
- Published
- 2024
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29. Exploring interspecific hybridization dynamics in artificial forests of Pinus brutia and P. halepensis: Implications for sustainable afforestation.
- Author
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Houminer N, Osem Y, Riov J, Sherman A, Rozen A, Sela H, and David-Schwartz R
- Subjects
- Israel, Conservation of Natural Resources, Seeds genetics, Seeds growth & development, Genetic Variation, Hybridization, Genetic, Pinus genetics, Pinus growth & development, Seedlings genetics, Seedlings growth & development, Forests, Polymorphism, Single Nucleotide genetics
- Abstract
Interspecific hybridization increases genetic diversity, which is essential for coping with changing environments. Hybrid zones, occurring naturally in overlapping habitats of closely related species, can be artificially established during afforestation. The resulting interspecific hybridization may promote sustainability in artificial forests, particularly in regions facing degradation due to climate change. Currently, there is limited evidence of hybridization during regeneration of artificial forests. Here, we studied the frequency of Pinus brutia Ten. × P. halepensis Mill. hybridization in five planted forests in Israel in three stages of forest regeneration: seeds before dispersal, emerged seedlings and recruited seedlings at the end of the dry season. We found hybrids on P. brutia, but not on P. halepensis trees due to asynchronous cone production phenology. Using 94 single-nucleotide polymorphism (SNP) markers, we found hybrids at all stages, most of which were hybrids of advanced generations. The hybrid proportions increased from 4.7 ± 2.1 to 8.2 ± 1.4 and 21.6 ± 6.4 per cent, from seeds to emerged seedlings and to recruited seedlings stages, respectively. The increased hybrid ratio implies an advantage of hybrids over P. brutia during forest regeneration. To test this hypothesis, we measured seedling growth rate and morphological traits under controlled conditions and found that the hybrid seedlings exhibited selected traits of the two parental species, which likely contributed to the fitness and survival of the hybrids during the dry season. This study highlights the potential contribution of hybrids to sustainable-planted forests and contributes to the understanding of genetic changes that occur during the regeneration of artificial forests., (© 2024 The Author(s). Molecular Ecology published by John Wiley & Sons Ltd.)
- Published
- 2024
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30. Dissection of a rapidly evolving wheat resistance gene cluster by long-read genome sequencing accelerated the cloning of Pm69.
- Author
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Li Y, Wei ZZ, Sela H, Govta L, Klymiuk V, Roychowdhury R, Chawla HS, Ens J, Wiebe K, Bocharova V, Ben-David R, Pawar PB, Zhang Y, Jaiwar S, Molnár I, Doležel J, Coaker G, Pozniak CJ, and Fahima T
- Subjects
- Chromosome Mapping, Cloning, Molecular, Multigene Family, Triticum genetics, Genes, Plant genetics
- Abstract
Gene cloning in repeat-rich polyploid genomes remains challenging. Here, we describe a strategy for overcoming major bottlenecks in cloning of the powdery mildew resistance gene (R-gene) Pm69 derived from tetraploid wild emmer wheat. A conventional positional cloning approach was not effective owing to suppressed recombination. Chromosome sorting was compromised by insufficient purity. A Pm69 physical map, constructed by assembling Oxford Nanopore Technology (ONT) long-read genome sequences, revealed a rapidly evolving nucleotide-binding leucine-rich repeat (NLR) R-gene cluster with structural variations. A single candidate NLR was identified by anchoring RNA sequencing reads from susceptible mutants to ONT contigs and was validated by virus-induced gene silencing. Pm69 is likely a newly evolved NLR and was discovered in only one location across the wild emmer wheat distribution range in Israel. Pm69 was successfully introgressed into cultivated wheat, and a diagnostic molecular marker was used to accelerate its deployment and pyramiding with other R-genes., (Copyright © 2023 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2024
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31. Genome-wide association mapping of rust resistance in Aegilops longissima .
- Author
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Page R, Huang S, Ronen M, Sela H, Sharon A, Shrestha S, Poland J, and Steffenson BJ
- Abstract
The rust diseases, including leaf rust caused by Puccinia triticina ( Pt ), stem rust caused by P. graminis f. sp. tritici ( Pgt ), and stripe rust caused by P. striiformis f. sp. tritici ( Pst ), are major limiting factors in wheat production worldwide. Identification of novel sources of rust resistance genes is key to developing cultivars resistant to rapidly evolving pathogen populations. Aegilops longissima is a diploid wild grass native to the Levant and closely related to the modern bread wheat D subgenome. To explore resistance genes in the species, we evaluated a large panel of Ae. longissima for resistance to several races of Pt , Pgt , and Pst , and conducted a genome-wide association study (GWAS) to map rust resistance loci in the species. A panel of 404 Ae. longissima accessions, mostly collected from Israel, were screened for seedling-stage resistance to four races of Pt , four races of Pgt , and three races of Pst . Out of the 404 accessions screened, two were found that were resistant to all 11 races of the three rust pathogens screened. The percentage of all accessions screened that were resistant to a given rust pathogen race ranged from 18.5% to 99.7%. Genotyping-by-sequencing (GBS) was performed on 381 accessions of the Ae. longissima panel, wherein 125,343 single nucleotide polymorphisms (SNPs) were obtained after alignment to the Ae. longissima reference genome assembly and quality control filtering. Genetic diversity analysis revealed the presence of two distinct subpopulations, which followed a geographic pattern of a northern and a southern subpopulation. Association mapping was performed in the genotyped portion of the collection (n = 381) and in each subpopulation (n = 204 and 174) independently via a single-locus mixed-linear model, and two multi-locus models, FarmCPU, and BLINK. A large number (195) of markers were significantly associated with resistance to at least one of 10 rust pathogen races evaluated, nine of which are key candidate markers for further investigation due to their detection via multiple models and/or their association with resistance to more than one pathogen race. The novel resistance loci identified will provide additional diversity available for use in wheat breeding., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Page, Huang, Ronen, Sela, Sharon, Shrestha, Poland and Steffenson.)
- Published
- 2023
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32. Prospective evaluation of clinical characteristics and maternal outcomes of women with pathologically confirmed postpartum retained placental fragments.
- Author
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Rottenstreich M, Atia O, Greifner N, Rotem R, Grisaru-Granovsky S, Vernea F, Reichman O, and Y Sela H
- Subjects
- Female, Pregnancy, Humans, Placenta, Prospective Studies, Postpartum Period, Hemoglobins, Placenta, Retained epidemiology, Placenta, Retained etiology, Postpartum Hemorrhage epidemiology, Postpartum Hemorrhage etiology, Postpartum Hemorrhage prevention & control, Pregnancy Complications
- Abstract
Objective: To determine the incidence, risk factors, and short-term maternal outcomes of women with pathologically confirmed retained products of conception (RPOC) following vaginal delivery., Methods: Prospective cohort study of women with suspicion of RPOC following vaginal delivery, from March 2018 to April 2019. Women were followed for eight weeks postpartum. Women with complete retained placenta were excluded. Women with pathologically confirmed RPOC were compared to those without. Univariate analysis was conducted (ORs; [95% CI]) and was followed by multivariate analysis (aOR; [95% CI])., Results: During the study period, there were 16,583 vaginal deliveries. A total of 96 women (0.58%) with a suspicion of RPOC were enrolled, of these, 53 women (55%) had pathologically confirmed RPOC. The most significant risk factors for pathologically confirmed RPOC were placental abruption (aOR 5.0 [2.29-11.13]) and Oxytocin augmentation of labor (aOR 1.7 [1.07-2.63]). Pathologically confirmed RPOC were associated with higher rates of prolonged hospitalization (OR 9.2 [2.83-30.05]), postpartum hemorrhage (PPH) (OR 6.6 [3.60-11.98]), hemoglobin drop > 3 g/dl (OR 11.4 [5.49-23.49]), and blood transfusion (OR 8.6 [2.07-38.18]). Women who had exploration of uterine cavity without pathological confirmation of RPOC, still had higher rates of perineal laceration (OR 17.6 [4.93-63.08]), PPH (OR 6.1 [3.05-12.21]), and a hemoglobin drop > 3 g/dl (OR 6.0 [2.13-16.95])., Conclusions: Pathologically confirmed RPOC following vaginal delivery has unique characteristics and is associated with significantly higher rates of PPH and blood transfusions. These findings may assist in the development of better criteria for selecting women for manual exploration and for preventive measures to reduce PPH and complications.
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- 2022
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33. Thinning of specific retinal layers as a novel biomarker for adverse outcomes in high-risk pregnancy.
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Hanhart J, Weill Y, Wasser LM, Zadok D, Glick A, Farkash R, Grisaro-Granovsky S, Sela HY, and Avitan T
- Subjects
- Pregnancy, Infant, Newborn, Female, Humans, Adolescent, Young Adult, Adult, Middle Aged, Tomography, Optical Coherence methods, Pregnancy, High-Risk, Retina diagnostic imaging, Biomarkers, Nerve Fibers, Retinal Ganglion Cells
- Abstract
Purpose: To investigate a potential association between retinal layer thinning and pregnancy-related adverse outcomes., Methods: A prospective observational study included 32 pregnant women between the ages of 18 and 45. Seventeen had uneventful pregnancies, and 15 experienced an adverse obstetrical outcome. Macular swept-source ocular coherence tomography was performed, and selective layers of the retina were evaluated. Adverse obstetrical outcome was defined as any of the following: preterm delivery, preeclampsia, pregnancy-induced hypertension, elevated liver function tests, thrombocytopenia and need for magnesium., Results: The inner superior ganglion cell layer (GCL) was found to be thinner in the cohort with composite adverse obstetrical outcomes than in the cohort without complications (84.5±6.9 vs. 89.5±6.1μm respectively; P=0.04). Total inner superior (295.5±39.1 vs. 302.5±12.7μm; P=0.03) and inferior retinal thickness (289.0±13.9 vs. 301.0±17.1μm; P=0.03) as well as total macular volume (7.5±0.3 vs. 7.7±0.3 mm
3 ; P=0.02) were also lower in women with adverse obstetrical outcomes., Conclusion: Thinning of the macular ganglion cell layer was associated with adverse outcomes in pregnancy. Larger studies are necessary to assess the potential role of macular GCL analysis in pregnancy., (Copyright © 2022 Elsevier Masson SAS. All rights reserved.)- Published
- 2022
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34. Secundiparas following a failed vacuum delivery-factors associated with a successful vaginal delivery: a historical prospective cohort.
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Reichman O, Ehrlich Z, Suday R, Sela H, Gold G, Samueloff A, and Grisaru-Granovsky S
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- Female, Humans, Infant, Newborn, Pregnancy, Birth Weight, Prospective Studies, Trial of Labor, Delivery, Obstetric, Vacuum Extraction, Obstetrical adverse effects
- Abstract
Background: Few studies have focused on the delivery subsequent to a failed vacuum delivery (failed-VD) in secundiparas. The objective of the current study was to examine the factors associated with a vaginal delivery following a failed-VD., Methods: An historical prospective cohort. Obstetric characteristics of secundiparas who underwent a planned caesarean delivery (CD) were compared to those who elected a trial of labour (TOLAC) at single medical-centre, throughout 2006-2019. The latter were further analysed to study for factures associated with successful vaginal birth (VBAC)., Results: Among the 115 secundiparas included, 89 (77%) underwent TOLAC. Compared to women who underwent an elective CD, those who underwent TOLAC were younger by a mean of 4 years, were more likely to have conceived spontaneously, and had a more advanced gestation by a mean of 10 days. VBAC was achieved in 62 women (70%). New-borns of women with VBAC had in average a lower birth weight compared to those with failed TOLAC, (-)195 g ± 396 g versus ( +)197 g ± 454 g respectively, P < 0.01. Having a higher neonatal birthweight at P2 by increments of 500 g, 400 g or 300 g was associated with a failed TOLAC; OR of 9.7 (95%CI; 2.3, 40.0), 11.5 (95%CI; 2.8, 46.7) and 4.5 (95%CI; 1.4, 13.9), respectively., Conclusions: Among secundiparas with a previous CD due to a failed-VD, the absolute difference of neonatal BW was found to be significantly associated with achieving VBAC., (© 2022. The Author(s).)
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- 2022
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35. Virulence Survey of Puccinia striiformis in Israel Revealed Considerable Changes in the Pathogen Population During the Period 2001 to 2019.
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Kosman E, Ben-Yehuda P, Manisterski J, Anikster Y, and Sela H
- Subjects
- Virulence genetics, Israel, Genotype, Triticum genetics, Plant Diseases genetics, Basidiomycota genetics
- Abstract
A total of 353 urediniospore isolates of Puccinia striiformis f. sp. tritici ( Pst ) collected in Israel during 2001 to 2019 were analyzed. Pst pathogenicity was studied with a set of 20 differentials (17 Avocet and 3 other lines). Three periods were compared: 2001 to 2007, 2009 to 2016, and 2017 to 2019. No virulence to Yr5 or Yr15 was detected. Virulence frequencies on Yr4 , Yr10 , Yr24 , and YrSp genes rose to the moderate level (0.28 to 0.44) in 2017 to 2019. Virulence frequencies to Yr2 and Yr9 decreased. One Pst phenotype was identified in all three periods, but its frequency drastically decreased from 0.74 in 2001 to 2016 to 0.21 in 2017 to 2019. The most probable scenario of emergence of wheat yellow rust in Israel is wind dissemination of Pst urediniospores from the Horn of Africa. Variability of the Pst population increased amid considerable evolution with two major transformations in 2009 and 2017. The first modification can be attributed to changes in wheat genetic background in Israel due to deployment of new cultivars resistant to yellow rust since 2004. The second shift in 2017 can be primarily explained by intensive deployment of wheat cultivars resistant to the stem rust race Ug99 in the 2010s in the Horn of Africa. This led to changing genetic backgrounds of the cultivated wheats in the donor region and development and long-distance spread of new Pst phenotypes to Israel. Two singular multivirulent Pst phenotypes were identified in 2019, one of them being closely related to the aggressive Warrior race. Such phenotypes may potentially defeat existing resistances.
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- 2022
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36. Genome-Wide Association Study in Bread Wheat Identifies Genomic Regions Associated with Grain Yield and Quality under Contrasting Water Availability.
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Govta N, Polda I, Sela H, Cohen Y, Beckles DM, Korol AB, Fahima T, Saranga Y, and Krugman T
- Subjects
- Bread, Edible Grain genetics, Genomics, Phenotype, Quantitative Trait Loci, Genome-Wide Association Study, Triticum genetics
- Abstract
The objectives of this study were to identify genetic loci in the bread wheat genome that would influence yield stability and quality under water stress, and to identify accessions that can be recommended for cultivation in dry and hot regions. We performed a genome-wide association study (GWAS) using a panel of 232 wheat accessions spanning diverse ecogeographic regions. Plants were evaluated in the Israeli Northern Negev, under two environments: water-limited (D; 250 mm) and well-watered (W; 450 mm) conditions; they were genotyped with ~71,500 SNPs derived from exome capture sequencing. Of the 14 phenotypic traits evaluated, 12 had significantly lower values under D compared to W conditions, while the values for two traits were higher under D. High heritability ( H
2 = 0.5-0.9) was observed for grain yield, spike weight, number of grains per spike, peduncle length, and plant height. Days to heading and grain yield could be partitioned based on accession origins. GWAS identified 154 marker-trait associations (MTAs) for yield and quality-related traits, 82 under D and 72 under W, and identified potential candidate genes. We identified 24 accessions showing high and/or stable yields under D conditions that can be recommended for cultivation in regions under the threat of global climate change., Competing Interests: The authors declare no conflicts of interest.- Published
- 2022
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37. Genome sequences of three Aegilops species of the section Sitopsis reveal phylogenetic relationships and provide resources for wheat improvement.
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Avni R, Lux T, Minz-Dub A, Millet E, Sela H, Distelfeld A, Deek J, Yu G, Steuernagel B, Pozniak C, Ens J, Gundlach H, Mayer KFX, Himmelbach A, Stein N, Mascher M, Spannagl M, Wulff BBH, and Sharon A
- Subjects
- Genome, Plant genetics, Phylogeny, Poaceae genetics, Triticum genetics, Aegilops genetics
- Abstract
Aegilops is a close relative of wheat (Triticum spp.), and Aegilops species in the section Sitopsis represent a rich reservoir of genetic diversity for the improvement of wheat. To understand their diversity and advance their utilization, we produced whole-genome assemblies of Aegilops longissima and Aegilops speltoides. Whole-genome comparative analysis, along with the recently sequenced Aegilops sharonensis genome, showed that the Ae. longissima and Ae. sharonensis genomes are highly similar and are most closely related to the wheat D subgenome. By contrast, the Ae. speltoides genome is more closely related to the B subgenome. Haplotype block analysis supported the idea that Ae. speltoides genome is closest to the wheat B subgenome, and highlighted variable and similar genomic regions between the three Aegilops species and wheat. Genome-wide analysis of nucleotide-binding leucine-rich repeat (NLR) genes revealed species-specific and lineage-specific NLR genes and variants, demonstrating the potential of Aegilops genomes for wheat improvement., (© 2022 The Authors. The Plant Journal published by Society for Experimental Biology and John Wiley & Sons Ltd.)
- Published
- 2022
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38. Covid-19 vaccination during the third trimester of pregnancy: rate of vaccination and maternal and neonatal outcomes, a multicentre retrospective cohort study.
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Rottenstreich M, Sela HY, Rotem R, Kadish E, Wiener-Well Y, and Grisaru-Granovsky S
- Subjects
- COVID-19 Vaccines administration & dosage, COVID-19 Vaccines adverse effects, Cohort Studies, Female, Humans, Infant, Newborn, Israel epidemiology, Patient Safety, Pregnancy, Pregnancy Outcome epidemiology, Pregnancy Trimester, Third, Retrospective Studies, SARS-CoV-2, Treatment Outcome, BNT162 Vaccine administration & dosage, BNT162 Vaccine adverse effects, COVID-19 epidemiology, COVID-19 prevention & control, Vaccination methods, Vaccination statistics & numerical data
- Abstract
Objective: To evaluate the impact of Covid-19 vaccination (Pfizer-BioNTech BNT162b2) during the third trimester of pregnancy on maternal and neonatal outcomes., Design: A multicentre, retrospective computerised database., Population: Women who gave birth at >24 weeks of gestation in Israel, between January and April 2021, with full records of Covid-19 disease and vaccination status., Methods: Women who received two doses of the vaccine were compared with unvaccinated women. Women who were recorded as having disease or a positive Covid-19 polymerase chain reaction (PCR) swab during pregnancy or delivery were excluded from both study groups. Univariate analysis was followed by multivariate logistic regression., Main Outcome Measures: Composite adverse maternal outcomes. Secondary outcomes were vaccination rate and composite adverse neonatal outcomes., Results: The overall uptake of one or both vaccines was 40.2%; 712 women who received two doses of the Covid-19 vaccine were compared with 1063 unvaccinated women. Maternal composite outcomes were comparable between the groups; however, women who received the vaccine had higher rates of elective caesarean deliveries (CDs) and lower rates of vacuum deliveries. An adjusted multivariable logistic regression analysis demonstrated that Covid-19 vaccination was not associated with maternal composite adverse outcome (aOR 0.8, 95% CI 0.61-1.03); a significant reduction in the risk for neonatal composite adverse outcomes was observed (aOR 0.5, 95% CI 0.36-0.74)., Conclusions: In a motivated population covered by a National Health Insurance Plan, we found a 40.2% rate of vaccination for the Covid-19 vaccine during the third trimester of pregnancy, which was not associated with adverse maternal outcomes and, moreover, decreased the risk for neonatal adverse outcomes., Tweetable Abstract: Covid-19 vaccine during pregnancy is safe for both mother and fetus., (© 2021 John Wiley & Sons Ltd.)
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- 2022
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39. Efficient maternal to neonatal transfer of antibodies against SARS-CoV-2 and BNT162b2 mRNA COVID-19 vaccine.
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Beharier O, Plitman Mayo R, Raz T, Nahum Sacks K, Schreiber L, Suissa-Cohen Y, Chen R, Gomez-Tolub R, Hadar E, Gabbay-Benziv R, Moshkovich YJ, Biron-Shental T, Shechter-Maor G, Farladansky-Gershnabel S, Yitzhak Sela H, Benyamini-Raischer H, Sela ND, Goldman-Wohl D, Shulman Z, Many A, Barr H, Yagel S, Neeman M, and Kovo M
- Published
- 2021
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40. Correction to: TdPm60 identified in wild emmer wheat is an ortholog of Pm60 and constitutes a strong candidate for PmG16 powdery mildew resistance.
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Li Y, Wei ZZ, Fatiukha A, Jaiwar S, Wang H, Hasan S, Liu Z, Sela H, Krugman T, and Fahima T
- Published
- 2021
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41. TdPm60 identified in wild emmer wheat is an ortholog of Pm60 and constitutes a strong candidate for PmG16 powdery mildew resistance.
- Author
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Li Y, Wei ZZ, Fatiukha A, Jaiwar S, Wang H, Hasan S, Liu Z, Sela H, Krugman T, and Fahima T
- Subjects
- Disease Resistance genetics, Gene Expression Regulation, Plant, Plant Diseases genetics, Plant Diseases microbiology, Plant Proteins genetics, Triticum growth & development, Triticum microbiology, Ascomycota physiology, Chromosome Mapping methods, Chromosomes, Plant genetics, Disease Resistance immunology, Plant Diseases immunology, Plant Proteins metabolism, Triticum genetics
- Abstract
Key Message: We identified TdPm60 alleles from wild emmer wheat (WEW), an ortholog of Pm60 from T. urartu, which constitutes a strong candidate for PmG16 mildew resistance. Deployment of PmG16 in Israeli modern bread wheat cultivar Ruta improved the resistance to several local Bgt isolates. Wild emmer wheat (WEW), the tetraploid progenitor of durum and bread wheat, is a valuable genetic resource for resistance to powdery mildew fungal disease caused by Blumeria graminis f. sp. tritici (Bgt). PmG16 gene, derived from WEW, confers high resistance to most tested Bgt isolates. We mapped PmG16 to a 1.4-cM interval between the flanking markers uhw386 and uhw390 on Chromosome 7AL. Based on gene annotation of WEW reference genome Zavitan_V1, 34 predicted genes were identified within the ~ 3.48-Mb target region. Six genes were annotated as associated with disease resistance, of which TRIDC7AG077150.1 was found to be highly similar to Pm60, previously cloned from Triticum urartu, and resides in the same syntenic region. The functional molecular marker (FMM) for Pm60 (M-Pm60-S1) co-segregated with PmG16, suggesting the Pm60 ortholog from WEW (designated here as TdPm60) as a strong candidate for PmG16. Sequence alignment identified only eight SNPs that differentiate between TdPm60 and TuPm60. Furthermore, TdPm60 was found to be present also in the WEW donor lines of the powdery mildew resistance genes MlIW172 and MlIW72, mapped to the same region of Chromosome 7AL as PmG16, suggesting that TdPm60 constitutes a candidate also for these genes. Furthermore, screening of additional 230 WEW accessions with Pm60 specific markers revealed 58 resistant accessions from the Southern Levant that harbored TdPm60, while none of the susceptible accessions showed the presence of this gene. Deployment of PmG16 in Israeli modern bread wheat cultivar Ruta conferred resistance against several local Bgt isolates., (© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
- Published
- 2021
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42. The Effectiveness of Physical and Chemical Defense Responses of Wild Emmer Wheat Against Aphids Depends on Leaf Position and Genotype.
- Author
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Singh A, Dilkes B, Sela H, and Tzin V
- Abstract
The bird cherry-oat aphid ( Rhopalosiphum padi ) is one of the most destructive insect pests in wheat production. To reduce aphid damage, wheat plants have evolved various chemical and physical defense mechanisms. Although these mechanisms have been frequently reported, much less is known about their effectiveness. The tetraploid wild emmer wheat (WEW; Triticum turgidum ssp. dicoccoides ), one of the progenitors of domesticated wheat, possesses untapped resources from its numerous desirable traits, including insect resistance. The goal of this research was to determine the effectiveness of trichomes (physical defense) and benzoxazinoids (BXDs; chemical defense) in aphid resistance by exploiting the natural diversity of WEW. We integrated a large dataset composed of trichome density and BXD abundance across wheat genotypes, different leaf positions, conditions (constitutive and aphid-induced), and tissues (whole leaf and phloem sap). First, we evaluated aphid reproduction on 203 wheat accessions and found large variation in this trait. Then, we chose eight WEW genotypes and one domesticated durum wheat cultivar for detailed quantification of the defense mechanisms across three leaves. We discovered that these defense mechanisms are influenced by both leaf position and genotype, where aphid reproduction was the highest on leaf-1 (the oldest), and trichome density was the lowest. We compared the changes in trichome density and BXD levels upon aphid infestation and found only minor changes relative to untreated plants. This suggests that the defense mechanisms in the whole leaf are primarily anticipatory and unlikely to contribute to aphid-induced defense. Next, we quantified BXD levels in the phloem sap and detected a significant induction of two compounds upon aphid infestation. Moreover, evaluating aphid feeding patterns showed that aphids prefer to feed on the oldest leaf. These findings revealed the dynamic response at the whole leaf and phloem levels that altered aphid feeding and reproduction. Overall, they suggested that trichomes and the BXD 2,4-dihydroxy-7- methoxy-1,4-benzoxazin-3-one (DIMBOA) levels are the main factors determining aphid resistance, while trichomes are more effective than BXDs. Accessions from the WEW germplasm, rich with trichomes and BXDs, can be used as new genetic sources to improve the resistance of elite wheat cultivars., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Singh, Dilkes, Sela and Tzin.)
- Published
- 2021
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43. Genome-Wide Mapping of Loci for Adult-Plant Resistance to Stripe Rust in Durum Wheat Svevo Using the 90K SNP Array.
- Author
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Zhou X, Zhong X, Roter J, Li X, Yao Q, Yan J, Yang S, Guo Q, Distelfeld A, Sela H, and Kang Z
- Subjects
- China, Humans, Israel, Polymorphism, Single Nucleotide genetics, Disease Resistance genetics, Triticum genetics
- Abstract
Stripe rust is a foliar disease in wheat caused by Puccinia striiformis f. tritici . The best way to protect wheat from this disease is by growing resistant cultivars. Tetraploid wheat can serve as a good source of valuable genetic diversity for various traits. Here, we report the mapping of nine stripe rust resistance quantitative trait loci (QTL) effective against P. striiformis f. tritici in China and Israel. We used recombinant inbred lines (RILs) developed from a cross between the durum wheat cultivar Svevo and Triticum dicoccoides accession Zavitan. By genotyping the RIL population of 137 lines using the wheat 90K single-nucleotide polymorphism array, we mapped an adult-plant resistance locus QYrsv.swust-1BL.1 , the most effective QTL, within a 0.75-centimorgan region in T. turgidum subsp. durum 'Svevo' on chromosome arm 1BL, corresponding to the region of 670.7 to 671.5 Mb on the Chinese Spring chromosome arm 1BL. Of the other eight minor-effect stripe rust QTL, seven were from Svevo and mapped on chromosomes 1A, 1B, 2B, 3A, 4A, and 5A, and one was from Zavitan and mapped on chromosome 2A. Several QTL with epistatic effects were identified as well. The markers linked to the resistance QTL can be useful in marker-assisted selection for incorporation of these resistance QTL into both durum and common wheat cultivars.
- Published
- 2021
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44. The Israeli-Palestinian wheat landraces collection: restoration and characterization of lost genetic diversity.
- Author
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Frankin S, Kunta S, Abbo S, Sela H, Goldberg BZ, Bonfil DJ, Levy AA, Avivi-Ragolsky N, Nashef K, Roychowdhury R, Faraj T, Lifshitz D, Mayzlish-Gati E, and Ben-David R
- Subjects
- Agriculture history, Alleles, Genotype, History, 20th Century, History, 21st Century, Israel, Plant Breeding, Triticum chemistry, Genetic Variation, Triticum classification, Triticum genetics
- Abstract
Background: For over a century, genetic diversity of wheat worldwide was eroded by continual selection for high yields and industrial demands. Wheat landraces cultivated in Israel and Palestine demonstrate high genetic diversity and a potentially wide repertoire of adaptive alleles. While most Israeli-Palestinian wheat landraces were lost in the transition to 'Green Revolution' semi-dwarf varieties, some germplasm collections made at the beginning of the 20th century survived in gene banks and private collections worldwide. However, fragmentation and poor conservation place this unique genetic resource at a high risk of genetic erosion. Herein, we describe a long-term initiative to restore, conserve, and characterize a collection of Israeli and Palestinian wheat landraces (IPLR)., Results: We report on (i) the IPLR construction (n = 932), (ii) the historical and agronomic context to this collection, (iii) the characterization and assessment of the IPLR's genetic diversity, and (iv) a data comparison from two distinct subcollections within IPLR: a collection made by N. Vavilov in 1926 (IPLR-VIR) and a later one (1979-1981) made by Y. Mattatia (IPLR-M). Though conducted in the same eco-geographic space, these two collections were subjected to considerably different conservation pathways. IPLR-M, which underwent only one propagation cycle, demonstrated marked genetic and phenotypic variability (within and between accessions) in comparison with IPLR-VIR, which had been regularly regenerated over ∼90 years., Conclusion: We postulate that long-term ex situ conservation involving human and genotype × environment selection may significantly reduce accession heterogeneity and allelic diversity. Results are further discussed in a broader context of pre-breeding and conservation. © 2019 Society of Chemical Industry., (© 2019 Society of Chemical Industry.)
- Published
- 2020
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45. Reducing the size of an alien segment carrying leaf rust and stripe rust resistance in wheat.
- Author
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Khazan S, Minz-Dub A, Sela H, Manisterski J, Ben-Yehuda P, Sharon A, and Millet E
- Subjects
- Aegilops metabolism, Disease Resistance genetics, Genetic Markers, Plant Diseases microbiology, Polymerase Chain Reaction, Triticum metabolism, Aegilops genetics, Plant Breeding, Plant Diseases genetics, Polymorphism, Single Nucleotide, Triticum genetics
- Abstract
Background: Leaf and stripe rusts are two major wheat diseases, causing significant yield losses. The preferred way for protecting wheat from rust pathogens is by introgression of rust resistance traits from wheat-related wild species. To avoid genetic drag due to replacement of large wheat chromosomal segments by the alien chromatin, it is necessary to shorten the alien chromosome segment in primary recombinants., Results: Here we report on shortening of an alien chromosome segment in wheat that carries leaf and stripe rust resistance from Sharon goatgrass (Aegilops sharonensis). Rust resistant wheat introgression lines were selected and the alien region was mapped using genotyping by sequencing. Single polymorphic nucleotides (SNP) were identified and used to generate diagnostic PCR markers. Shortening of the alien fragment was achieved by induced homoeologous pairing and lines with shortened alien chromosome were identified using the PCR markers. Further reduction of the segment was achieved in tertiary recombinants without losing the rust resistance., Conclusions: Alien chromatin in wheat with novel rust resistance genes was characterized by SNP markers and shortened by homoeologous recombination to avoid deleterious traits. The resulting wheat lines are resistant to highly virulent races of leaf and stripe rust pathogens and can be used as both resistant wheat in the field and source for gene transfer to other wheat lines/species.
- Published
- 2020
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46. Characterization of the Barley Net Blotch Pathosystem at the Center of Origin of Host and Pathogen.
- Author
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Ronen M, Sela H, Fridman E, Perl-Treves R, Kopahnke D, Moreau A, Ben-David R, and Harel A
- Abstract
Net blotch (NB) is a major disease of barley caused by the fungus Pyrenophora teres f. teres ( Ptt ), and P. teres f. maculata ( Ptm ). Ptt and Ptm infect the cultivated crop ( Hordeum vulgare ) and its wild relatives ( H. vulgare ssp. spontaneum and H. murinum ssp. glaucum ). The main goal of this research was to study the NB-causing pathogen in the crop center of origin. To address this, we have constructed a Ptt (n = 15) and Ptm (n = 12) collection isolated from three barley species across Israel. Isolates were characterized genetically and phenotypically. Aggressiveness of the isolates was determined based on necrotrophic growth rate on detached leaves of barley. In addition, isolates were genetically characterized by the mating type, followed by phylogenetic analysis, clustering them into seven groups. The analysis showed no significant differentiation of isolates based on either geographic origin, host of origin or form ( Ptt vs. Ptm ). Nevertheless, there was a significant difference in aggressiveness among the isolates regardless of host species, geographic location or sampling site. Moreover, it was apparent that the isolates derived from wild hosts were more variable in their necrotrophic growth rate, compared to isolates sampled from cultivated hosts, thereby suggesting that NB plays a major role in epidemiology at the center of barley origin where most of the diversity lies. Ptm has significantly higher necrotrophic and saprotrophic growth rates than Ptt , and for both a significant negative correlation was found between light intensity exposure and growth rates.
- Published
- 2019
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47. Wheat domestication in light of haplotype analyses of the Brittle rachis 1 genes (BTR1-A and BTR1-B).
- Author
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Nave M, Avni R, Çakır E, Portnoy V, Sela H, Pourkheirandish M, Ozkan H, Hale I, Komatsuda T, Dvorak J, and Distelfeld A
- Subjects
- Genes, Plant physiology, Haplotypes genetics, Mutation, Plant Proteins physiology, Promoter Regions, Genetic, Domestication, Genes, Plant genetics, Plant Proteins genetics, Triticum genetics
- Abstract
Wheat domestication was a milestone in the rise of agrarian societies in the Fertile Crescent. As opposed to the freely dispersing seeds of its tetraploid progenitor wild emmer, the hallmark trait of domesticated wheat is intact, harvestable spikes. During domestication, wheat acquired recessive loss-of-function mutations in the Brittle Rachis 1 genes, both in the A genome (BTR1-A) and B genome (BTR1-B). In this study, we probe the geographical provenances of these mutations via haplotype analyses of a collection of wild and domesticated accessions. Our results show that the precursor of the domesticated haplotype of BTR1-A was detected in 32% of the wild accessions gathered throughout the Levant, from central Israel to central Turkey. In contrast, the precursor of the domesticated haplotype of BTR1-B, which carries a distinct 11 bp deletion in the promoter region, was found in only 10% of the tested wild accessions, all from the Southern Levant. Moreover, we identified of a single wild emmer accession in Southern Levant that carries the progenitor haplotypes for both BTR1-A and BTR1-B genes. These observations suggest that at least part of the emmer domestication process occurred in Southern Levant, contrary to the widely held view that the northern part of the Fertile Crescent was the center of wheat domestication., (Copyright © 2019 Elsevier B.V. All rights reserved.)
- Published
- 2019
- Full Text
- View/download PDF
48. Retrospective study to investigate fresh frozen plasma and packed cell ratios when administered for women with postpartum hemorrhage, before and after introduction of a massive transfusion protocol.
- Author
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Weiniger CF, Yakirevich-Amir N, Sela HY, Gural A, Ioscovich A, and Einav S
- Subjects
- Adult, Cohort Studies, Erythrocyte Transfusion methods, Female, Humans, Pregnancy, Retrospective Studies, Treatment Outcome, Blood Transfusion methods, Plasma, Postpartum Hemorrhage therapy, Practice Guidelines as Topic
- Abstract
Background: Administration of packed red blood cells (PRBC) and fresh frozen plasma (FFP) to women with postpartum hemorrhage (PPH) before and after introduction of a massive transfusion protocol., Methods: The retrospective PPH study cohort of two tertiary centers was identified using blood bank records, verified by patient electronic medical records. We identified women transfused with ≥3 units PRBC in a short time period within 24 hours of delivery. Since 2010, both centers have used a protocol using 1:1 FFP:PRBC ratios. Demographic, obstetric, and blood management data were retrieved from medical records. Outcome measures included estimated blood loss, blood product administration, and hematologic variables., Results: 273 women were included, 112 (41.0%) prior to introduction of the protocol (2004-2009) and 161 (59.0%) afterwards (2010-2014). The frequency of women managed with 1:1 FFP:PRBC ratios was similar before 55/112 (49.1%) and after 83/161 (51.6%) introduction of the protocol (P=0.69). There was strong correlation between PRBC units transfused and the FFP:PRBC transfusion ratio (R-square 0.866, P <0.0001), demonstrating that as the number of transfused PRBC units increased, FFP:PRBC ratios became closer to 1:1. There were no outcome differences between women managed before and after introduction of the protocol., Conclusions: Among women with PPH receiving ≥3 PRBC units within a short period of time, it appears that factors other than the existence of our massive transfusion protocol influence the number and ratio of PRBC and FFP units transfused. Blood products were not transfused according to exact ratios, even when guided by a protocol., (Copyright © 2018 Elsevier Ltd. All rights reserved.)
- Published
- 2018
- Full Text
- View/download PDF
49. Cloning of the wheat Yr15 resistance gene sheds light on the plant tandem kinase-pseudokinase family.
- Author
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Klymiuk V, Yaniv E, Huang L, Raats D, Fatiukha A, Chen S, Feng L, Frenkel Z, Krugman T, Lidzbarsky G, Chang W, Jääskeläinen MJ, Schudoma C, Paulin L, Laine P, Bariana H, Sela H, Saleem K, Sørensen CK, Hovmøller MS, Distelfeld A, Chalhoub B, Dubcovsky J, Korol AB, Schulman AH, and Fahima T
- Subjects
- Animals, Chromosome Mapping, Evolution, Molecular, Hordeum genetics, Janus Kinases genetics, Mutagenesis, Plant Diseases microbiology, Plants, Genetically Modified, Protein Domains genetics, Protein Domains physiology, Triticum microbiology, Basidiomycota pathogenicity, Disease Resistance genetics, Genes, Plant physiology, Plant Diseases immunology, Plant Proteins genetics, Triticum physiology
- Abstract
Yellow rust, caused by Puccinia striiformis f. sp. tritici (Pst), is a devastating fungal disease threatening much of global wheat production. Race-specific resistance (R)-genes are used to control rust diseases, but the rapid emergence of virulent Pst races has prompted the search for a more durable resistance. Here, we report the cloning of Yr15, a broad-spectrum R-gene derived from wild emmer wheat, which encodes a putative kinase-pseudokinase protein, designated as wheat tandem kinase 1, comprising a unique R-gene structure in wheat. The existence of a similar gene architecture in 92 putative proteins across the plant kingdom, including the barley RPG1 and a candidate for Ug8, suggests that they are members of a distinct family of plant proteins, termed here tandem kinase-pseudokinases (TKPs). The presence of kinase-pseudokinase structure in both plant TKPs and the animal Janus kinases sheds light on the molecular evolution of immune responses across these two kingdoms.
- Published
- 2018
- Full Text
- View/download PDF
50. Correction to: Landraces of snake melon, an ancient Middle Eastern crop, reveal extensive morphological and DNA diversity for potential genetic improvement.
- Author
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Omari S, Kamenir Y, Benichou JIC, Pariente S, Sela H, and Perl-Treves R
- Abstract
Following publication of the original article [1], the authors reported the need for a more detailed acknowledgement of the source of the samples that were analyzed and their coordinates, which are discussed in the 'Methods' section of the article. This Correction provides an addition to the 'Methods' section, and a subsequently revised 'Acknowledgements' and 'Availability of data and materials' section.
- Published
- 2018
- Full Text
- View/download PDF
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