36 results on '"Semprini, Simona"'
Search Results
2. Mutational induction in SARS-CoV-2 major lineages by experimental exposure to neutralising sera
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Brandolini, Martina, Dirani, Giorgio, Taddei, Francesca, Zannoli, Silvia, Denicolò, Agnese, Arfilli, Valentina, Battisti, Arianna, Manera, Martina, Mancini, Andrea, Grumiro, Laura, Marino, Maria Michela, Gatti, Giulia, Fantini, Michela, Semprini, Simona, and Sambri, Vittorio
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- 2022
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3. Evaluation of a rapid Loop Mediated Isothermal Amplification (LAMP) test for the laboratory diagnosis of sexually transmitted infections.
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Brandolini, Martina, Grumiro, Laura, Farabegoli, Patrizia, Dirani, Giorgio, Zannoli, Silvia, Zaghi, Irene, Guerra, Massimiliano, Taddei, Francesca, Gatti, Giulia, Marzucco, Anna, Montanari, Maria Sofia, De Pascali, Alessandra Mistral, Semprini, Simona, Cricca, Monica, and Sambri, Vittorio
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SEXUALLY transmitted diseases ,CLINICAL pathology ,TESTING laboratories ,LABORATORY technicians ,LOOP-mediated isothermal amplification - Abstract
Sexually transmitted infections (STIs) have seen a considerable increase in the last years and given the health burden they may represent from both a personal and community perspective, they require surveillance and prevention programmes based on a timely and decentralized diagnosis. In this context, user-friendly rapid molecular tests may represent a good trade-off between diagnostic accuracy, accessibility and affordability. In this study we evaluated the diagnostic performance of a new real-time LAMP (Loop Mediated Isothermal Amplification) method for the rapid detection and differentiation of 7 major sexually transmissible pathogens by analysing real clinical samples (genital and extra-genital matrices) from individuals with suspected STIs. The assay showed good overall diagnostic performances in terms of sensitivity, specificity and concordance with a gold-standard PCR-based molecular method. This assay, not requiring specialised laboratory technicians or expensive instrumentation, but nonetheless capable of guaranteeing accurate results, is within the reach of outpatient settings, obstetrics, and gynaecology clinic, hence ensuring on-field access to early diagnosis. [ABSTRACT FROM AUTHOR]
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- 2024
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4. No(cebo) Vax: COVID-19 Vaccine Beliefs Are Important Determinants of Both Occurrence and Perceived Severity of Common Vaccines’ Adverse Effects
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Mattarozzi, Katia, primary, Bagnis, Arianna, additional, Kłosowska, Joanna, additional, Bąbel, Przemysław, additional, Cremonini, Valeria, additional, De Palma, Alessandra, additional, Fabbri, Arianna, additional, Farinella, Elisa, additional, Puccini, Lucrezia, additional, Sambri, Vittorio, additional, Semprini, Simona, additional, and Russo, Paolo Maria, additional
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- 2023
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5. Kinetics of dried blood spot-measured anti-SARS-CoV2 Spike IgG in mRNA-vaccinated healthcare workers
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Puccini, Lucrezia, primary, Fantini, Michela, additional, Biagetti, Carlo, additional, Angelini, Raffaella, additional, Dirani, Giorgio, additional, Grumiro, Laura, additional, Schiavone, Pasqua, additional, Sparacino, Monica, additional, Semprini, Simona, additional, Sambri, Vittorio, additional, and Cricca, Monica, additional
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- 2023
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6. sj-docx-1-pss-10.1177_09567976231163875 – Supplemental material for No(cebo) Vax: COVID-19 Vaccine Beliefs Are Important Determinants of Both Occurrence and Perceived Severity of Common Vaccines’ Adverse Effects
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Mattarozzi, Katia, Bagnis, Arianna, Kłosowska, Joanna, Bąbel, Przemysław, Cremonini, Valeria, De Palma, Alessandra, Fabbri, Arianna, Farinella, Elisa, Puccini, Lucrezia, Sambri, Vittorio, Semprini, Simona, and Russo, Paolo Maria
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FOS: Psychology ,FOS: Clinical medicine ,170199 Psychology not elsewhere classified ,110319 Psychiatry (incl. Psychotherapy) ,110904 Neurology and Neuromuscular Diseases ,Neuroscience - Abstract
Supplemental material, sj-docx-1-pss-10.1177_09567976231163875 for No(cebo) Vax: COVID-19 Vaccine Beliefs Are Important Determinants of Both Occurrence and Perceived Severity of Common Vaccines’ Adverse Effects by Katia Mattarozzi, Arianna Bagnis, Joanna Kłosowska, Przemysław Bąbel, Valeria Cremonini, Alessandra De Palma, Arianna Fabbri, Elisa Farinella, Lucrezia Puccini, Vittorio Sambri, Simona Semprini and Paolo Maria Russo in Psychological Science
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- 2023
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7. Viral Population Heterogeneity and Fluctuating Mutational Pattern during a Persistent SARS-CoV-2 Infection in an Immunocompromised Patient
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Brandolini, Martina, primary, Zannoli, Silvia, additional, Gatti, Giulia, additional, Arfilli, Valentina, additional, Cricca, Monica, additional, Dirani, Giorgio, additional, Denicolò, Agnese, additional, Semprini, Simona, additional, Grumiro, Laura, additional, Imola, Manuela, additional, Larne, Damiano, additional, Marino, Maria Michela, additional, Manera, Martina, additional, Mancini, Andrea, additional, Taddei, Francesca, additional, Zagarrigo, Manuel, additional, Biagetti, Carlo, additional, and Sambri, Vittorio, additional
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- 2023
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8. Omicron Sub-Lineage BA.5 and Recombinant XBB Evasion from Antibody Neutralisation in BNT162b2 Vaccine Recipients
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Brandolini, Martina, primary, Gatti, Giulia, additional, Grumiro, Laura, additional, Zannoli, Silvia, additional, Arfilli, Valentina, additional, Cricca, Monica, additional, Dirani, Giorgio, additional, Denicolò, Agnese, additional, Marino, Maria Michela, additional, Manera, Martina, additional, Mancini, Andrea, additional, Taddei, Francesca, additional, Semprini, Simona, additional, and Sambri, Vittorio, additional
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- 2023
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9. Efficacy of SARS-CoV-2 Vaccination in Dialysis Patients: Epidemiological Analysis and Evaluation of the Clinical Progress
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Mosconi, Giovanni, primary, Fantini, Michela, additional, Righini, Matteo, additional, Flachi, Marta, additional, Semprini, Simona, additional, Hu, Lilio, additional, Chiappo, Francesca, additional, Veterani, Barbara, additional, Ambri, Katia, additional, Ferrini, Franca, additional, Milanesi, Catia, additional, Giudicissi, Antonio, additional, La Manna, Gaetano, additional, Rigotti, Angelo, additional, Buscaroli, Andrea, additional, Sambri, Vittorio, additional, and Cappuccilli, Maria, additional
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- 2022
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10. Antibody Responses after Two Doses of COVID-19 mRNA Vaccine in Dialysis and Kidney Transplantation Patients Recovered from SARS-CoV-2 Infection
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Cappuccilli, Maria, primary, Semprini, Simona, additional, Fabbri, Elisabetta, additional, Fantini, Michela, additional, Bruno, Paolo Ferdinando, additional, Spazzoli, Alessandra, additional, Righini, Matteo, additional, Flachi, Marta, additional, La Manna, Gaetano, additional, Sambri, Vittorio, additional, and Mosconi, Giovanni, additional
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- 2022
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11. Kinetics of DBS Measured Anti SARS-CoV2 Spike IgG in mRNA Vaccinated Healthcare Workers
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Puccini, Lucrezia, primary, Fantini, Michela, additional, Biagetti, Carlo, additional, Angelini, Raffaella, additional, Dirani, Giorgio, additional, Grumiro, Laura, additional, Schiavone, Pasqualina, additional, Sparacino, Monica, additional, Semprini, Simona, additional, Sambri, Vittorio, additional, and Cricca, Monica, additional
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- 2022
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12. 126. Magnitude and Dynamics of the T-Cell Response to SARS-CoV-2 Infection and Vaccination
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Snyder, Thomas M, primary, Gittelman, Rachel M, additional, Klinger, Mark, additional, May, Damon H, additional, Osborne, Edward J, additional, Taniguchi, Ruth, additional, Jabran Zahid, H, additional, Elyanow, Rebecca, additional, Dalai, Sudeb C, additional, Kaplan, Ian M, additional, Dines, Jennifer N, additional, Noakes, Matthew T, additional, Pandya, Ravi, additional, Baldo, Lance, additional, Semprini, Simona, additional, Cerchione, Claudio, additional, Nicolini, Fabio, additional, Mazza, Massimiliano, additional, Delmonte, Ottavia M, additional, Dobbs, Kerry, additional, Laguna-Goya, Rocio, additional, Carreño-Tarragona, Gonazalo, additional, Barrio, Santiago, additional, Imberti, Luisa, additional, Sottini, Alessandra, additional, Quiros-Roldan, Eugenia, additional, Rossi, Camillo, additional, Biondi, Andrea, additional, Bettini, Laura Rachele, additional, D’Angio, Mariella, additional, Bonfanti, Paolo, additional, Tompkins, Miranda F, additional, Alba, Camille, additional, Dalgard, Clifton, additional, Sambri, Vittorio, additional, Martinelli, Giovanni, additional, Goldman, Jason D, additional, Heath, James R, additional, Su, Helen C, additional, Notarangelo, Luigi D, additional, Paz-Artal, Estela, additional, Martinez-Lopez, Joaquin, additional, Carlson, Jonathan M, additional, and Robins, Harlan S, additional
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- 2021
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13. Persistence of Antibody Responses to the SARS-CoV-2 in Dialysis Patients and Renal Transplant Recipients Recovered from COVID-19
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Cappuccilli, Maria, primary, Bruno, Paolo Ferdinando, additional, Spazzoli, Alessandra, additional, Righini, Matteo, additional, Flachi, Marta, additional, Semprini, Simona, additional, Grumiro, Laura, additional, Marino, Maria Michela, additional, Schiavone, Pasqua, additional, Fabbri, Elisabetta, additional, Fantini, Michela, additional, Buscaroli, Andrea, additional, Rigotti, Angelo, additional, La Manna, Gaetano, additional, Sambri, Vittorio, additional, and Mosconi, Giovanni, additional
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- 2021
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14. Gli esami Interferon Gamma Release Assays (IGRA) nella diagnostica tubercolare. Le nuove linee guida del Centers for Disease Control and Prevention
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Dorizzi, Romolo M., Billi, Patrizia, Semprini, Simona, and Della Strada, Mara
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- 2011
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15. COVID-19 Infection: Viral Clearance and Antibody Response in Dialysis Patients and Renal Transplant Recipients
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Bruno, Paolo Ferdinando, primary, Cappuccilli, Maria, additional, Spazzoli, Alessandra, additional, De Liberali, Matteo, additional, Sejdiu, Brunilda, additional, Napoli, Marianna, additional, Minerva, Vera, additional, Semprini, Simona, additional, Dirani, Giorgio, additional, Sambri, Vittorio, additional, Buscaroli, Andrea, additional, Rigotti, Angelo, additional, Mancini, Elena, additional, Masperi, Paolo, additional, La Manna, Gaetano, additional, and Mosconi, Giovanni, additional
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- 2021
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16. Magnitude and Dynamics of the T-Cell Response to SARS-CoV-2 Infection at Both Individual and Population Levels
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Snyder, Thomas M., primary, Gittelman, Rachel M., additional, Klinger, Mark, additional, May, Damon H., additional, Osborne, Edward J., additional, Taniguchi, Ruth, additional, Zahid, H. Jabran, additional, Kaplan, Ian M., additional, Dines, Jennifer N., additional, Noakes, Matthew T., additional, Pandya, Ravi, additional, Chen, Xiaoyu, additional, Elasady, Summer, additional, Svejnoha, Emily, additional, Ebert, Peter, additional, Pesesky, Mitchell W., additional, Almeida, Patricia De, additional, O’Donnell, Hope, additional, DeGottardi, Quinn, additional, Keitany, Gladys, additional, Lu, Jennifer, additional, Vong, Allen, additional, Elyanow, Rebecca, additional, Fields, Paul, additional, Greissl, Julia, additional, Baldo, Lance, additional, Semprini, Simona, additional, Cerchione, Claudio, additional, Nicolini, Fabio, additional, Mazza, Massimiliano, additional, Delmonte, Ottavia M., additional, Dobbs, Kerry, additional, Laguna-Goya, Rocio, additional, Carreño-Tarragona, Gonzalo, additional, Barrio, Santiago, additional, Imberti, Luisa, additional, Sottini, Alessandra, additional, Quiros-Roldan, Eugenia, additional, Rossi, Camillo, additional, Biondi, Andrea, additional, Bettini, Laura Rachele, additional, D’Angio, Mariella, additional, Bonfanti, Paolo, additional, Tompkins, Miranda F., additional, Alba, Camille, additional, Dalgard, Clifton, additional, Sambri, Vittorio, additional, Martinelli, Giovanni, additional, Goldman, Jason D., additional, Heath, James R., additional, Su, Helen C., additional, Notarangelo, Luigi D., additional, Paz-Artal, Estela, additional, Martinez-Lopez, Joaquin, additional, Carlson, Jonathan M., additional, and Robins, Harlan S., additional
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- 2020
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17. A large-scale database of T-cell receptor beta (TCRβ) sequences and binding associations from natural and synthetic exposure to SARS-CoV-2.
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Nolan, Sean, primary, Vignali, Marissa, additional, Klinger, Mark, additional, Dines, Jennifer N., additional, Kaplan, Ian M., additional, Svejnoha, Emily, additional, Craft, Tracy, additional, Boland, Katie, additional, Pesesky, Mitch, additional, Gittelman, Rachel M., additional, Snyder, Thomas M., additional, Gooley, Christopher J., additional, Semprini, Simona, additional, Cerchione, Claudio, additional, Mazza, Massimiliano, additional, Delmonte, Ottavia M., additional, Dobbs, Kerry, additional, Carreño-Tarragona, Gonzalo, additional, Barrio, Santiago, additional, Sambri, Vittorio, additional, Martinelli, Giovanni, additional, Goldman, Jason D., additional, Heath, James R., additional, Notarangelo, Luigi D., additional, Carlson, Jonathan M., additional, Martinez-Lopez, Joaquin, additional, and Robins, Harlan S., additional
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- 2020
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18. Multicenter Evaluation of the C6 Lyme ELISA Kit for the Diagnosis of Lyme Disease
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Zannoli, Silvia, primary, Fantini, Michela, additional, Semprini, Simona, additional, Marchini, Barbara, additional, Ceccarelli, Barbara, additional, Sparacino, Monica, additional, Schiavone, Pasqua, additional, Belgrano, Anna, additional, Ruscio, Maurizio, additional, Gobbetti, Martina, additional, Nicoletti, Maira, additional, Robatscher, Eva, additional, Pagani, Elisabetta, additional, and Sambri, Vittorio, additional
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- 2020
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19. The seroprevalence of anti-hepatitis E IgG antibodies in blood donors in the Greater Romagna area, Italy
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Pierro, Anna, primary, Semprini, Simona, additional, Fantini, Michela, additional, Billi, Patrizia, additional, Biguzzi, Rino, additional, Agostini, Vanessa, additional, and Sambri, Vittorio, additional
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- 2019
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20. Epidemiology of cytomegalovirus infection in pregnant women living in the Greater Romagna Area, Italy
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Billi, Patrizia, primary, Della Strada, Mara, additional, Semprini, Simona, additional, and Sambri, Vittorio, additional
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- 2015
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21. Reply to “Better Method for Evaluating a New Laboratory Test for Syphilis”
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Enders, Martin, primary, Gleich, Michael, additional, Mühlbacher, Annelies, additional, Sakuldamrongpanich, Tasanee, additional, Turhan, Ajda, additional, Sertöz, Rüchan, additional, Semprini, Simona, additional, and Sambri, Vittorio, additional
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- 2015
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22. Performance Evaluation of the Elecsys Syphilis Assay for the Detection of Total Antibodies to Treponema pallidum
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Enders, Martin, primary, Hunjet, Andrea, additional, Gleich, Michael, additional, Imdahl, Roland, additional, Mühlbacher, Annelies, additional, Schennach, Harald, additional, Chaiwong, Kriangsak, additional, Sakuldamrongpanich, Tasanee, additional, Turhan, Ajda, additional, Sertöz, Rüchan, additional, Wolf, Eva, additional, Mayer, Wolfgang, additional, Tao, Chuanmin, additional, Wang, Lan Lan, additional, Semprini, Simona, additional, and Sambri, Vittorio, additional
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- 2015
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23. Performance Evaluation of the Elecsys Syphilis Assay for the Detection of Total Antibodies to Treponema pallidum
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Enders, Martin, Hunjet, Andrea, Gleich, Michael, Imdahl, Roland, Mühlbacher, Annelies, Schennach, Harald, Chaiwong, Kriangsak, Sakuldamrongpanich, Tasanee, Turhan, Ajda, Sertöz, Rüchan, Wolf, Eva, Mayer, Wolfgang, Tao, Chuanmin, Wang, Lan Lan, Semprini, Simona, and Sambri, Vittorio
- Abstract
ABSTRACTSyphilis is a health problem of increasing incidence in recent years that may have severe complications if not diagnosed and treated at an early stage. There are many diagnostic tests available for syphilis, but there is no gold standard, and diagnosis therefore usually relies upon a combination of tests. In this multicenter study, we evaluated the treponemal Elecsys syphilis assay for use in the diagnosis of syphilis in routine samples, i.e., when syphilis is suspected or during antenatal or blood donation screening. The sensitivity and specificity of the Elecsys syphilis assay were compared head to head with those of other treponemal assays used in routine clinical practice and were assessed in potentially cross-reactive samples from patients with Epstein-Barr virus, HIV, and Lyme disease. In a total of 8,063 syphilis-negative samples collected from routine diagnostic requests and blood donations, the Elecsys syphilis assay had a specificity of 99.88%. In 928 samples previously identified as syphilis positive, the sensitivity was 99.57 to 100% (the result is presented as a range depending on whether four initially indeterminate samples are included in the assessment). The specificity of the Elecsys syphilis assay in patients with other infections was 100%; no false-positive samples were identified.
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- 2014
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24. Omicron Sub-Lineage BA.5 and Recombinant XBB Evasion from Antibody Neutralisation in BNT162b2 Vaccine Recipients
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Martina Brandolini, Giulia Gatti, Laura Grumiro, Silvia Zannoli, Valentina Arfilli, Monica Cricca, Giorgio Dirani, Agnese Denicolò, Maria Michela Marino, Martina Manera, Andrea Mancini, Francesca Taddei, Simona Semprini, Vittorio Sambri, Brandolini, Martina, Gatti, Giulia, Grumiro, Laura, Zannoli, Silvia, Arfilli, Valentina, Cricca, Monica, Dirani, Giorgio, Denicolò, Agnese, Marino, Maria Michela, Manera, Martina, Mancini, Andrea, Taddei, Francesca, Semprini, Simona, and Sambri, Vittorio
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Microbiology (medical) ,XBB recombinant ,SARS-CoV-2 ,neutralising antibody response ,Virology ,immune escape ,mRNA-vaccine ,Microbiology - Abstract
The recent emergence of a number of new SARS-CoV-2 variants resulting from recombination between two distinct parental lineages or sub-lineages within the same lineage has sparked the debate regarding potential enhanced viral infectivity and immune escape. Among these, XBB, recombinant of BA.2.10 and BA.2.75, has caused major concern in some countries due to its rapid increase in prevalence. In this study, we tested XBB escape capacity from mRNA-vaccine-induced (BNT162b2) neutralising antibodies compared to B.1 ancestral lineage and another co-circulating variant (B.1.1.529 BA.5) by analysing sera collected 30 days after the second dose in 92 healthcare workers. Our data highlighted an enhanced and statistically significant immune escape ability of the XBB recombinant. Although these are preliminary results, this study highlights the importance of immune escape monitoring of new and forthcoming variants and of the reformulation of existing vaccines.
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- 2023
25. Antibody Responses after Two Doses of COVID-19 mRNA Vaccine in Dialysis and Kidney Transplantation Patients Recovered from SARS-CoV-2 Infection
- Author
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Maria Cappuccilli, Simona Semprini, Elisabetta Fabbri, Michela Fantini, Paolo Ferdinando Bruno, Alessandra Spazzoli, Matteo Righini, Marta Flachi, Gaetano La Manna, Vittorio Sambri, Giovanni Mosconi, Cappuccilli, Maria, Semprini, Simona, Fabbri, Elisabetta, Fantini, Michela, Bruno, Paolo Ferdinando, Spazzoli, Alessandra, Righini, Matteo, Flachi, Marta, La Manna, Gaetano, Sambri, Vittorio, and Mosconi, Giovanni
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COVID-19 vaccination ,SARS-CoV-2 ,SARS-CoV-2 infection ,COVID-19 ,General Medicine ,Antibodies, Viral ,Kidney Transplantation ,mRNA vaccines ,hemodialysi ,Vaccines, Inactivated ,SARS-CoV-2 antibodie ,Renal Dialysis ,Immunoglobulin G ,Antibody Formation ,Humans ,BNT162 Vaccine ,immunodepressed patient ,2019-nCoV Vaccine mRNA-1273 - Abstract
Background and Objectives: Hemodialysis patients (HD) and kidney transplant recipients (KTRs) have been heavily impacted by COVID-19, showing increased risk of infection, worse clinical outcomes, and higher mortality rates than the general population. Although mass vaccination remains the most successful measure in counteracting the pandemic, less evidence is available on vaccine effectiveness in immunodepressed subjects previously infected and recovered from COVID-19. Materials and Methods: This study aimed at investigating the ability to develop an adequate antibody response after vaccination in a 2-dose series against SARS-CoV-2 in HD patients and KTR that was administered after laboratory and clinical recovery from COVID-19. Results: Comparing SARS-CoV-2 S1/S2 IgG levels measured before and after 2 doses of mRNA vaccine (BNT162b2 vaccine, Comirnaty, Pfizer–BioNTech or mRNA-1273 vaccine, Spikevax, Moderna), highly significant increases of antibody titers were observed. The antibody peak level was reached at 3 months following second dose administration, regardless of the underlying cause of immune depression and the time of pre-vaccine serology assessment after negativization. Conclusions: Our data indicate that HD patients and KTR exhibit a satisfying antibody response to a 2-dose series of mRNA vaccine, even in cases when infection-induced humoral immunity was poor or rapidly fading. Further studies are needed to evaluate the role of booster doses in conferring effective and durable protection in weak patient categories.
- Published
- 2022
26. Efficacy of SARS-CoV-2 Vaccination in Dialysis Patients: Epidemiological Analysis and Evaluation of the Clinical Progress
- Author
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Giovanni Mosconi, Michela Fantini, Matteo Righini, Marta Flachi, Simona Semprini, Lilio Hu, Francesca Chiappo, Barbara Veterani, Katia Ambri, Franca Ferrini, Catia Milanesi, Antonio Giudicissi, Gaetano La Manna, Angelo Rigotti, Andrea Buscaroli, Vittorio Sambri, Maria Cappuccilli, Mosconi, Giovanni, Fantini, Michela, Righini, Matteo, Flachi, Marta, Semprini, Simona, Hu, Lilio, Chiappo, Francesca, Veterani, Barbara, Ambri, Katia, Ferrini, Franca, Milanesi, Catia, Giudicissi, Antonio, La Manna, Gaetano, Rigotti, Angelo, Buscaroli, Andrea, Sambri, Vittorio, and Cappuccilli, Maria
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mRNA vaccines ,COVID-19 vaccination ,hemodialysi ,SARS-CoV-2 infection ,COVID-19 ,General Medicine ,hemodialysis ,immunodepressed patients ,immunodepressed patient - Abstract
This study investigated the impact of the fourth COVID-19 pandemic wave on dialysis patients of Romagna territory, assessing the associations of vaccination status with infection risk, clinical severity and mortality. From November 2021 to February 2022, an epidemiological search was conducted on 829 patients under dialysis treatment for at least one month. The data were then analyzed with reference to the general population of the same area. A temporal comparison was also carried out with the previous pandemic waves (from March 2020 to October 2021). The epidemiological evolution over time in the dialysis population and in Romagna citizens replicated the global trend, as the peak of the fourth wave corresponded to the time of maximum diffusion of omicron variant (B.1.1.529). Of 771 prevalent dialysis patients at the beginning of the study, 109 (14.1%) contracted SARS-CoV-2 infection during the 4-month observation period. Vaccine adherence in the dialysis population of the reference area was above 95%. Compared to fully or partially vaccinated subjects, the unvaccinated ones showed a significantly higher proportion of infections (12.5% vs. 27.0% p = 0.0341), a more frequent need for hospitalization (22.2% vs. 50.0%) and a 3.3-fold increased mortality risk. These findings confirm the effectiveness of COVID-19 vaccines in keeping infectious risk under control and ameliorating clinical outcomes in immunocompromised patients.
- Published
- 2022
27. Mutational induction in SARS-CoV-2 major lineages by experimental exposure to neutralising sera
- Author
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Martina Brandolini, Giorgio Dirani, Francesca Taddei, Silvia Zannoli, Agnese Denicolò, Valentina Arfilli, Arianna Battisti, Martina Manera, Andrea Mancini, Laura Grumiro, Maria Michela Marino, Giulia Gatti, Michela Fantini, Simona Semprini, Vittorio Sambri, Brandolini, Martina, Dirani, Giorgio, Taddei, Francesca, Zannoli, Silvia, Denicolò, Agnese, Arfilli, Valentina, Battisti, Arianna, Manera, Martina, Mancini, Andrea, Grumiro, Laura, Marino, Maria Michela, Gatti, Giulia, Fantini, Michela, Semprini, Simona, and Sambri, Vittorio
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Multidisciplinary ,Neutralization Tests ,SARS-CoV-2 ,Mutation ,Spike Glycoprotein, Coronavirus ,SARS CoV-2, neutralizing antibody, mutational analysis, whole genome sequencing ,COVID-19 ,Humans ,Antibodies, Viral ,Antibodies, Neutralizing - Abstract
The ongoing evolution of SARS-CoV-2 and the emergence of new viral variants bearing specific escape mutations responsible for immune evasion from antibody neutralisation has required a more accurate characterisation of the immune response as one of the evolutive forces behind viral adaptation to a largely immunised human population. In this work, culturing in the presence of neutralising sera vigorously promoted mutagenesis leading to the acquisition of known escape mutations on the spike as well as new presumptive escape mutations on structural proteins whose role as target of the neutralizing antibody response might have been thus far widely neglected. From this perspective, this study, in addition to tracing the past evolution of the species back to interactions with neutralising antibody immune response, also offers a glimpse into future evolutive scenarios.
- Published
- 2022
28. Multicenter Evaluation of the C6 Lyme ELISA Kit for the Diagnosis of Lyme Disease
- Author
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Barbara Ceccarelli, Maurizio Ruscio, Simona Semprini, Michela Fantini, Monica Sparacino, Elisabetta Pagani, Anna Belgrano, Silvia Zannoli, Vittorio Sambri, Barbara Marchini, Maira Nicoletti, Pasqua Schiavone, Martina Gobbetti, Eva Robatscher, Zannoli, Silvia, Fantini, Michela, Semprini, Simona, Marchini, Barbara, Ceccarelli, Barbara, Sparacino, Monica, Schiavone, Pasqua, Belgrano, Anna, Ruscio, Maurizio, Gobbetti, Martina, Nicoletti, Maira, Robatscher, Eva, Pagani, Elisabetta, and Sambri, Vittorio
- Subjects
0301 basic medicine ,Microbiology (medical) ,medicine.medical_specialty ,Concordance ,030106 microbiology ,Microbiology ,Article ,03 medical and health sciences ,Elisa kit ,0302 clinical medicine ,Lyme disease ,Virology ,Internal medicine ,Epidemiology ,medicine ,030212 general & internal medicine ,Borrelia burgdorferi ,lcsh:QH301-705.5 ,borrelia burgdorferi ,biology ,business.industry ,bacterial infections and mycoses ,medicine.disease ,biology.organism_classification ,lyme disease ,LYME ,lcsh:Biology (General) ,biology.protein ,c6 ,Antibody ,business ,Antibody detection - Abstract
Lyme disease (LD), caused by infection with Borrelia burgdorferi, is the most common tick-borne infection in many regions of Eurasia. Antibody detection is the most frequently used laboratory test, favoring a two-step serodiagnostic algorithm, immunoenzymatic detection of antibodies to C6 has been shown to perform similarly to a standard two-step workflow. The aim of this study was the performance evaluation of the C6 Lyme ELISA kit compared to a standard two-step algorithm in three laboratories located in the northeastern region of Italy which cater to areas with different LD epidemiology. A total of 804 samples were tested, of which 695 gave concordant results between C6 testing and routine workflow (564 negative, 131 positive). Wherever available, clinical presentation and additional laboratory tests were analyzed to solve discrepancies. The C6 based method showed a good concordance with the standard two-step algorithm (Cohen&rsquo, s &kappa, = 0.619), however, the distribution of discrepancies seems to point towards a slightly lower specificity of C6 testing, which is supported by literature and could impact on patient management. The C6 ELISA, therefore, is not an ideal stand-alone test, however, if integrated into a two-step algorithm, it might play a part in achieving a sensitive, specific laboratory diagnosis of LD.
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- 2020
29. The seroprevalence of anti-hepatitis E IgG antibodies in blood donors in the Greater Romagna area, Italy
- Author
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Simona Semprini, Vanessa Agostini, Anna Pierro, Patrizia Billi, Vittorio Sambri, Rino Biguzzi, Michela Fantini, Pierro, Anna, Semprini, Simona, Fantini, Michela, Billi, Patrizia, Biguzzi, Rino, Agostini, Vanessa, and Sambri, Vittorio
- Subjects
biology ,business.industry ,medicine ,biology.protein ,Seroprevalence ,Antibody ,Hepatitis E ,medicine.disease ,business ,Virology ,HEV, blood donor, Romagna, Antibodies - Abstract
Objective: Data about Hepatitis E virus (HEV) prevalence are variable in Europe and also limited inItaly.WeaimedtodescribetheseroprevalenceofimmunoglobulinG(IgG)antibodiesagainst HEV infection among blood donors (BDs) in the Greater Romagna area, North-Eastern Italy. Materials and Methods: All serum samples were at first screened for anti-HEV IgG antibodies by a commercial enzyme-linked immunosorbent assay (ELISA) (DIA.PRO Diagnostic Bioprobes, Sesto San Giovanni (MI), Italy), used in our diagnostic routine and so considered as the reference test. Then, all serum samples were re-tested for anti-HEV IgG antibodies by the other two commercial ELISA (Wantai, Biologic Pharmacy Enterprise, Beijing, China; Euroimmun, Lübeck, Germany). The seroprevalence rate was calculated based on the immunoblotting (IB) assay confirmation. Results: A total of 500 BDs samples were tested by three commercial ELISA tests; positive and borderline results were confirmed by an IB assay. The overall anti-HEV IgG prevalence was 3.8% (CI: 2.303 – 5.871), 1.6% (CI: 0.693 – 3.128) and 2.8% (CI: 1.539 – 4.653) when samples were tested with DIA.PRO, Euroimmun and Wantai methods, respectively. The seroprevalence of IgG antibodies against HEV infection was found to be similar or lower than the previous reports in Italy. The results obtained by the different ELISA tests were similar. Conclusion: The data obtained in this study underline the need for achieving a harmonised testing algorithm that is necessary in order to be able to compare data from different studies. We suggest that the identification of potential HEV human infection should be added to the standard laboratory work-up for viral hepatitis.
- Published
- 2019
30. Epidemiology of cytomegalovirus infection in pregnant women living in the Greater Romagna Area, Italy
- Author
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Simona Semprini, Patrizia Billi, Mara Della Strada, Vittorio Sambri, Billi, Patrizia, Della Strada, Mara, Semprini, Simona, and Sambri, Vittorio
- Subjects
medicine.medical_specialty ,Pregnancy ,business.industry ,Igm antibody ,Obstetrics ,Incidence (epidemiology) ,Congenital cytomegalovirus infection ,lcsh:QR1-502 ,General Medicine ,North east ,medicine.disease ,lcsh:Microbiology ,Serology ,Cytomegalovirus infection ,Infectious Diseases ,Virology ,Epidemiology ,Immunology ,medicine ,Cytomegalovirus, pregnancy, Romagna, Antibodies ,Immunology and Epidemiology ,business - Abstract
Background. Aim of this study was to assess the incidence of Cytomegalovirus (CMV) infection in pregnant women living in Romagna area, in North East Italy to implement the best management of this infection. Materials and Methods. In 2012, 23,727 serological tests for CMV IgG and IgM antibodies were performed in the Microbiology Unit, the Hub Laboratory of the Greater Romagna Area: 6931 were pregnant women. Results and Conclusions. 179 subjects were positive for CMV IgM antibodies: 82 were not pregnant; 97 were IgM positive during pregnancy or in the course of a pre-conception evaluation. The detected incidence of the CMV infection in pregnancy (calculated at 1.40%) actually validates the literature data. This study’s findings clearly underline the usefulness of testing the CMV specific immune response in the pre-conception period or as early as possible during pregnancy.
- Published
- 2015
31. HIV-1 early and late diagnosis in the Emilia Romagna Region (Italy): A three year study
- Author
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Musumeci, G., Magnani, G., Bon, I., SERENA LONGO, Bertoldi, A., Antoni, A. M. D., Rossi, M. R., Ruggieri, A., Sambri, V., Semprini, S., Sighinolfi, L., Ursitti, M. A., Zerbini, A., Colangeli, V., Calza, L., Finarelli, A. C., Massimiliani, E., Re, M. C., Musumeci, Giuseppina, Magnani, Giacomo, Bon, Isabella, Longo, Serena, Bertoldi, Alessia, Antoni, Anna Maria Degli, Rossi, Maria Rita, Ruggieri, Alessandro, Sambri, Vittorio, Semprini, Simona, Sighinolfi, Laura, Ursitti, Maria Alessandra, Zerbini, Alessandro, Colangeli, Vincenzo, Calza, Leonardo, Finarelli, ALBA-CAROLA, Massimiliani, Erika, and Re, MARIA CARLA
- Subjects
Adult ,Male ,Microbiology (medical) ,HIV ,HIV Infections ,Middle Aged ,Viral Load ,CD4 Lymphocyte Count ,Italy ,pol Gene Products, Human Immunodeficiency Virus ,HIV-1 ,Humans ,RNA, Viral ,Female ,Homosexuality, Male ,Long-lasting infection ,Recent infection ,Substance Abuse, Intravenous ,Phylogeny ,Aged ,Viral strain - Abstract
It is crucial to establish the timing of infection and distinguish between early and long-lasting HIV-1 infections not only for partner notification and epidemiological surveillance, but also to offer early drug treatment and contain the spread of infection. This study analyzed serum and/or plasma samples with a first positive HIV antibody/antigen result coming from different Medical Centers in the Emilia Romagna Region, North East Italy, using the avidity assay, Western Blotting, RNA viral load, CD4 cell counts and genotyping assay. From May 2013 to May 2016, we certified 845 new HIV-1 infections, 18.7% of which were classified on the basis of avidity index as recent infections and 81.3% as long-lasting infections, with an estimated conversion time exceeding six months at the time of study. Western Blotting showed reactivity to only one or two HIV-1 proteins in recently infected patients (RIPs), while a complete pattern to gag, env and pol proteins was observed in most long-lasting infected patients (LLIPs). The median age, gender, nationality and risk transmission factors were comparable in RIPs and LLIPs. Phylogenetic analysis performed in available plasma disclosed B strains, non-B subtypes and circulating recombinant forms (CRFs) in both groups of patients, with a major presence of CRFs in non-Italian HIV subjects. The large number of patients unaware of their HIV status makes it crucial to discover hidden epidemics and implement appropriate targeted public health interventions.
32. [Resilience in COVID-19 times: general considerations on the recovery of a 93-year-old patient on haemodialysis treatment].
- Author
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Mosconi G, Spazzoli A, Bruno PF, Angelini ML, Cristino S, Lifrieri MF, Americo C, De Fabritiis M, Ambri K, Dirani G, Semprini S, Sambri V, and Zambianchi L
- Subjects
- Aged, 80 and over, Antibodies, Viral blood, COVID-19, COVID-19 Testing, Calcitriol therapeutic use, Clinical Laboratory Techniques, Comorbidity, Coronavirus Infections diagnosis, Coronavirus Infections drug therapy, Drug Therapy, Combination, Female, Heparin therapeutic use, Humans, Hydroxychloroquine therapeutic use, Immunoglobulin G blood, Immunoglobulin M blood, Nasopharynx virology, Platelet Aggregation Inhibitors therapeutic use, Pneumonia, Viral diagnosis, Pneumonia, Viral drug therapy, SARS-CoV-2, Time Factors, COVID-19 Drug Treatment, Betacoronavirus immunology, Betacoronavirus isolation & purification, Coronavirus Infections complications, Pandemics, Pneumonia, Viral complications, Renal Dialysis, Survivors
- Abstract
We report the case of a 93-year-old woman on haemodialysis treatment for more than 30 months and with multiple comorbidities who recovered from a Covid-19 infection without any significant clinical problems. The patient has shown a delay in viral clearance with swab test negativization (confirmed) after 33 days; after testing positive again, she has resulted persistently negative, (confirmed after 49 days). After the first negative swab, IgG and IgM antibodies have been found; these have remained persistently positive after a month. As well as highlighting an unexpected resilience in an extremely fragile context, the analysis of this case draws attention to patients' management and, potentially, to the need to arrange dialysis treatments in isolation for some time after their "laboratory recovery"., (Copyright by Società Italiana di Nefrologia SIN, Rome, Italy.)
- Published
- 2020
33. Magnitude and Dynamics of the T-Cell Response to SARS-CoV-2 Infection at Both Individual and Population Levels.
- Author
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Snyder TM, Gittelman RM, Klinger M, May DH, Osborne EJ, Taniguchi R, Zahid HJ, Kaplan IM, Dines JN, Noakes MT, Pandya R, Chen X, Elasady S, Svejnoha E, Ebert P, Pesesky MW, De Almeida P, O'Donnell H, DeGottardi Q, Keitany G, Lu J, Vong A, Elyanow R, Fields P, Greissl J, Baldo L, Semprini S, Cerchione C, Nicolini F, Mazza M, Delmonte OM, Dobbs K, Laguna-Goya R, Carreño-Tarragona G, Barrio S, Imberti L, Sottini A, Quiros-Roldan E, Rossi C, Biondi A, Bettini LR, D'Angio M, Bonfanti P, Tompkins MF, Alba C, Dalgard C, Sambri V, Martinelli G, Goldman JD, Heath JR, Su HC, Notarangelo LD, Paz-Artal E, Martinez-Lopez J, Carlson JM, and Robins HS
- Abstract
T cells are involved in the early identification and clearance of viral infections and also support the development of antibodies by B cells. This central role for T cells makes them a desirable target for assessing the immune response to SARS-CoV-2 infection. Here, we combined two high-throughput immune profiling methods to create a quantitative picture of the T-cell response to SARS-CoV-2. First, at the individual level, we deeply characterized 3 acutely infected and 58 recovered COVID-19 subjects by experimentally mapping their CD8 T-cell response through antigen stimulation to 545 Human Leukocyte Antigen (HLA) class I presented viral peptides (class II data in a forthcoming study). Then, at the population level, we performed T-cell repertoire sequencing on 1,815 samples (from 1,521 COVID-19 subjects) as well as 3,500 controls to identify shared "public" T-cell receptors (TCRs) associated with SARS-CoV-2 infection from both CD8 and CD4 T cells. Collectively, our data reveal that CD8 T-cell responses are often driven by a few immunodominant, HLA-restricted epitopes. As expected, the T-cell response to SARS-CoV-2 peaks about one to two weeks after infection and is detectable for at least several months after recovery. As an application of these data, we trained a classifier to diagnose SARS-CoV-2 infection based solely on TCR sequencing from blood samples, and observed, at 99.8% specificity, high early sensitivity soon after diagnosis (Day 3-7 = 85.1% [95% CI = 79.9-89.7]; Day 8-14 = 94.8% [90.7-98.4]) as well as lasting sensitivity after recovery (Day 29+/convalescent = 95.4% [92.1-98.3]). These results demonstrate an approach to reliably assess the adaptive immune response both soon after viral antigenic exposure (before antibodies are typically detectable) as well as at later time points. This blood-based molecular approach to characterizing the cellular immune response has applications in clinical diagnostics as well as in vaccine development and monitoring.
- Published
- 2020
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- View/download PDF
34. [Acro-ischemic injuries in children-adolescents during CoViD-19 pandemic: from lifestyle changes due to lockdown to interferone.]
- Author
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Marchetti F, Guiducci C, Bigucci B, Iacono A, Calderoni O, Sorci MR, Sparacino M, Semprini S, and Vergine G
- Subjects
- Adolescent, COVID-19, Chilblains epidemiology, Chilblains etiology, Chilblains immunology, Child, Coronavirus Infections complications, Coronavirus Infections immunology, Female, Humans, Ischemia etiology, Ischemia immunology, Italy epidemiology, Male, Pandemics, Pneumonia, Viral complications, Pneumonia, Viral immunology, Quarantine, Toes, Coronavirus Infections epidemiology, Interferons immunology, Ischemia epidemiology, Life Style, Pneumonia, Viral epidemiology
- Abstract
At the end of March 2020, just over a month after the first ascertained case of CoViD-19 infection in Italy, the first reports of acute lesions of acro-ischemia appeared, especially in pre-adolescents and adolescents. These manifestations have been called in the course of these months in various ways, from "acro-ischemia acuta", "erythema pernio", "chilblains", up to characterize them more recently as "CoViD Toes". Clinical manifestations do not usually associate with other typical symptoms of Covid-19 and do not find a classical and defined serological antibody response (IgG and IgM). From a clinical point of view it is a localized and self-resolving problem of an interesting and relatively new pathogenetic model of disease in relation to a viral agent. Future studies must make us understand if there is in this specific condition a low viral load is not detectable by current methods and if this explains the inability to produce an adequate immune response for CoViD-19. It is important to determine whether the interferon immune response in some subjects can be the cause of both the low viremia and the endothelial damage so localized in the acral-site, as happens in other models of diseases (chilblain-lupus like). On the contrary, some authors believe that the acral lesions are attributable to chilblains caused by a series of favourable environmental conditions due to forced enclosure. We report the descriptive experience of 14 cases of acro-ischemia in children and adolescents observed in the territorial area of Ravenna and Rimini. The cases were subjected to the nasopharyngeal swab and to the search for antibodies with ELISA method for CoViD-19 both with negative results.
- Published
- 2020
- Full Text
- View/download PDF
35. A large-scale database of T-cell receptor beta (TCRβ) sequences and binding associations from natural and synthetic exposure to SARS-CoV-2.
- Author
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Nolan S, Vignali M, Klinger M, Dines JN, Kaplan IM, Svejnoha E, Craft T, Boland K, Pesesky M, Gittelman RM, Snyder TM, Gooley CJ, Semprini S, Cerchione C, Mazza M, Delmonte OM, Dobbs K, Carreño-Tarragona G, Barrio S, Sambri V, Martinelli G, Goldman JD, Heath JR, Notarangelo LD, Carlson JM, Martinez-Lopez J, and Robins HS
- Abstract
We describe the establishment and current content of the ImmuneCODE™ database, which includes hundreds of millions of T-cell Receptor (TCR) sequences from over 1,400 subjects exposed to or infected with the SARS-CoV-2 virus, as well as over 135,000 high-confidence SARS-CoV-2-specific TCRs. This database is made freely available, and the data contained in it can be downloaded and analyzed online or offline to assist with the global efforts to understand the immune response to the SARS-CoV-2 virus and develop new interventions., Competing Interests: Conflict of Interest Statement S.N, M.V., M.K., J.D., I.M.K., E.S., T.C., K.B., M.P, R.M.G., T.M.S. and H.S.R. have a financial interest in Adaptive Biotechnologies. C. J. G. and J.M.C. have a financial interest in Microsoft. Dr. Martinez-Lopez is a consultant for Adaptive Biotechnologies in projects outside of COVID-19. Funding for the ISB INCOV project from BARDA was managed by Merck, Merck had no role in planning the research or writing the paper. All other authors declare no competing interests.
- Published
- 2020
- Full Text
- View/download PDF
36. HIV-1 early and late diagnosis in the Emilia Romagna Region (Italy): a three year study.
- Author
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Musumeci G, Magnani G, Bon I, Longo S, Bertoldi A, Degli Antoni AM, Rossi MR, Ruggeri A, Sambri V, Semprini S, Sighinolfi L, Ursitti MA, Zerbini A, Colangeli V, Calza L, Finarelli AC, Massimiliani E, and Re MC
- Subjects
- Adult, Aged, CD4 Lymphocyte Count, Female, HIV Infections epidemiology, HIV Infections transmission, Homosexuality, Male, Humans, Italy epidemiology, Male, Middle Aged, Phylogeny, RNA, Viral blood, Substance Abuse, Intravenous, Viral Load, pol Gene Products, Human Immunodeficiency Virus genetics, HIV Infections diagnosis, HIV-1 genetics
- Abstract
It is crucial to establish the timing of infection and distinguish between early and long-lasting HIV-1 infections not only for partner notification and epidemiological surveillance, but also to offer early drug treatment and contain the spread of infection. This study analyzed serum and/or plasma samples with a first positive HIV antibody/antigen result coming from different Medical Centers in the Emilia Romagna Region, North East Italy, using the avidity assay, Western Blotting, RNA viral load, CD4 cell counts and genotyping assay. From May 2013 to May 2016, we certified 845 new HIV-1 infections, 18.7% of which were classified on the basis of avidity index as recent infections and 81.3% as long-lasting infections, with an estimated conversion time exceeding six months at the time of study. Western Blotting showed reactivity to only one or two HIV-1 proteins in recently infected patients (RIPs), while a complete pattern to gag, env and pol proteins was observed in most long-lasting infected patients (LLIPs). The median age, gender, nationality and risk transmission factors were comparable in RIPs and LLIPs. Phylogenetic analysis performed in available plasma disclosed B strains, non-B subtypes and circulating recombinant forms (CRFs) in both groups of patients, with a major presence of CRFs in non-Italian HIV subjects. The large number of patients unaware of their HIV status makes it crucial to discover hidden epidemics and implement appropriate targeted public health interventions.
- Published
- 2016
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