1. A Novel 13q12 Microdeletion Associated with Familial Syndromic Corneal Opacification.
- Author
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Serpen JY, Presley W, Beil A, Armenti ST, Johnson K, Mian SI, Innis JW, and Prasov L
- Subjects
- Male, Female, Humans, Syndrome, Siblings, Microarray Analysis, Protein Serine-Threonine Kinases, Tumor Suppressor Proteins, Laryngomalacia, Hearing Loss, Sensorineural genetics
- Abstract
Progressive corneal opacification can result from multiple etiologies, including corneal dystrophies or systemic and genetic diseases. We describe a novel syndrome featuring progressive epithelial and anterior stromal opacification in a brother and sister and their mildly affected father, with all three family members having sensorineural hearing loss and two also with tracheomalacia/laryngomalacia. All carried a 1.2 Mb deletion at chromosome 13q12.11, with no other noteworthy co-segregating variants identified on clinical exome or chromosomal microarray. RNAseq analysis from an affected corneal epithelial sample from the proband's brother revealed downregulation of XPO4 , IFT88 , ZDHHC20 , LATS2 , SAP18 , and EEF1AKMT1 within the microdeletion interval, with no notable effect on the expression of nearby genes. Pathway analysis showed upregulation of collagen metabolism and extracellular matrix (ECM) formation/maintenance, with no significantly down-regulated pathways. Analysis of overlapping deletions/variants demonstrated that deleterious variants in XPO4 were found in patients with laryngomalacia and sensorineural hearing loss, with the latter phenotype also being a feature of variants in the partially overlapping DFNB 1 locus, yet none of these had reported corneal phenotypes. Together, these data define a novel microdeletion-associated syndromic progressive corneal opacification and suggest that a combination of genes within the microdeletion may contribute to ECM dysregulation leading to pathogenesis.
- Published
- 2023
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